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1 Assay visible to you, out of a total of 1

_A_03-Centrifuge

_p_RNAinVAL

Short Name: 03-Centrifuge Assay Class: DRY Assay Type: Centrifuge Title: Centrifuge classification of DNA reads Description: Taxonomic classification of shotgun gDNA Illumina reads from CPB gut microbiome and visualization using pavian pISA Assay creation date: 2021-01-15 pISA Assay creator: Marko Petek Phenodata: ../../phenodata_20210115.txt Featuredata: Data: http://stork/dirindex/fitostorage/fitostorageA/datarepo/ngs_omics/NGS_lde_dna-seq_2018_mpe_CPB-gut-metagenome/data/

Submitter: Marko Petek

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_03_Omics

Study: _S_02_metagenome_resp

Organisms: No organisms

SOPs: No SOPs

Data files: _ASSAY_METADATA.TXT, output/DNA_seq_combined_mpa.txt, output/DNA_seq_combined_mpa_OTU.txt, output/DNA_seq_combined_mpa_TAX.txt, output/README.txt, output/centrifuge_sample_reports.txt.zip, output/pavian/RNAinVAL_CPB_gut_content_shotgun_..., output/pavian/RNAinVAL_CPB_gut_content_shotgun_..., output/pavian/RNAinVAL_CPB_gut_content_shotgun_..., output/pavian/RNAinVAL_CPB_gut_content_shotgun_..., output/pavian/RNAinVAL_CPB_gut_content_shotgun_..., output/pavian/RNAinVAL_CPB_gut_content_shotgun_..., reports/centrifuge_kreport_ANALYSIS_all_to_H2O...., reports/pavian_table_summary_for_article.xlsx, scripts/Centrifuge_ibis2_commands.txt

Snapshots: No snapshots

Created: 12th Nov 2021 at 22:43, Last updated: 12th Nov 2021 at 23:14

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