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| CLCdnRY10_58073 | 1 | 1 | 3 | 18 | uv|AF379854.1:3-2710 | 1918 | 1903 | Weak | Weak | Suspect[1,2]; | NO_DATA | 1 | 1 | 4 | |
| CLCdnRY3_11520 | 1 | 1 | 336 | 351 | uv|JX560321.2:370-1372 | 232 | 247 | Weak | Weak | Suspect[352,375]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum tyramine N-feruloyltransferase 4/11-like (LOC102578749), mRNA | 4 |
| VdnRY1_98753 | 1 | 1 | 11 | 26 | uv|Z50148.1:1-178 | 45 | 60 | Weak | Weak | Suspect[1,10]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum thioredoxin H2-like (LOC102593604), transcript variant X2, mRNA | 4 |
| VdnRY4_2330 | 1 | 1 | 1 | 16 | uv|DQ666274.1:249-3225 | 2792 | 2807 | Weak | Weak | None | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102586591 (LOC102586591), mRNA | 4 |
| VdnRY6_5888 | 1 | 1 | 351 | 366 | uv|LC121523.1:7712-7810 | 32 | 17 | Weak | Weak | Suspect[367,375]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102586186 (LOC102586186), transcript variant X16, mRNA | 4 |
| CLCdnRY7_6826 | 1 | 1 | 344 | 360 | uv|X51450.1:2521-3852 | 958 | 974 | Weak | Weak | Suspect[361,374]; | TRUE_BIOLOGICAL | 1279 | 1 | 4.278074866 | |
| CLCdnRY8_24729 | 1 | 1 | 338 | 353 | uv|M77169.1:820-5161 | 2030 | 2015 | Weak | Weak | Suspect[354,374]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum pennellii chromosome ch09, complete genome | 4.010695187 |
| CLCdnRY10_44484 | 1 | 1 | 14 | 29 | uv|KF680545.1:1-2837 | 1558 | 1573 | Weak | Weak | Suspect[1,13]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum protein EXECUTER 1, chloroplastic (LOC102589029), mRNA | 4.010695187 |
| CLCdnRY12_39336 | 1 | 1 | 8 | 23 | uv|M37852.1:43-109 | 51 | 36 | Weak | Weak | Suspect[1,7]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum phosphoenolpyruvate carboxylase kinase 1-like (LOC102594673), mRNA | 4.010695187 |
| CLCdnRY7_46828 | 1 | 1 | 347 | 362 | uv|EU186086.1:9349-10480-30 | 532 | 547 | Weak | Weak | Suspect[363,374]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum serine/threonine-protein kinase CDL1 (LOC102585340), mRNA | 4.010695187 |
| CLCdnRY9_2185 | 1 | 1 | 346 | 361 | uv|U89961.1:1-4240 | 3646 | 3661 | Weak | Weak | Suspect[362,374]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum protein ECERIFERUM 1-like (LOC102593084), mRNA | 4.010695187 |
| VdnRY1_44080 | 1 | 1 | 339 | 354 | uv|U02436.1:3152-4436 | 436 | 421 | Weak | Weak | Suspect[355,374]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum coatomer subunit beta'-2-like (LOC102604581), mRNA | 4.010695187 |
| VdnRY1_82302 | 1 | 1 | 356 | 371 | uv|KC503965.1:3195-3771-42 | 361 | 376 | Weak | Weak | Suspect[372,374]; | TRUE_BIOLOGICAL | 1224 | 1 | Solanum demissum chromosome 5 clone PGEC747E24, complete sequence | 4.010695187 |
| VdnRY2_116632 | 1 | 1 | 19 | 34 | uv|KY031735.1:1-4680 | 4038 | 4053 | Weak | Weak | Suspect[1,18]; | TRUE_BIOLOGICAL | 82115 | 1 | PREDICTED: Solanum tuberosum auxin response factor 17 (LOC102588218), mRNA | 4.010695187 |
| VdnRY6_12115 | 1 | 1 | 3 | 20 | uv|KF718996.1:2914-4532 | 385 | 368 | Weak | Weak | Suspect[1,2]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum putative G3BP-like protein (LOC102594129), transcript variant X4, mRNA | 4.557640751 |
| VdnRY3_38005 | 1 | 1 | 354 | 370 | uv|X70276.1:4179-4959 | 399 | 415 | Weak | Weak | Suspect[371,373]; | TRUE_BIOLOGICAL | 4930 | 1 | Hyoscyamus niger mitochondrion, complete genome | 4.289544236 |
| CLCdnRY11_69082 | 1 | 1 | 347 | 362 | uv|L07041.1:1-670 | 264 | 279 | Weak | Weak | Suspect[363,373]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102599669 (LOC102599669), mRNA | 4.021447721 |
| CLCdnRY10_57176 | 1 | 1 | 12 | 27 | uv|KC702237.1:1-1024 | 365 | 380 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.021447721 |
| CLCdnRY12_43127 | 1 | 1 | 20 | 35 | uv|KY031736.1:1-4885 | 1799 | 1814 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 82115 | 1 | PREDICTED: Solanum tuberosum subtilisin-like protease SBT1.7 (LOC102595699), misc_RNA | 4.021447721 |
| SdnRY1_57840 | 1 | 1 | 5 | 20 | uv|KC702201.1:1-1023 | 899 | 884 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC102596550), mRNA | 4.021447721 |
| VdnRY1_31207 | 1 | 1 | 15 | 30 | uv|KM407509.1:3217-4703 | 807 | 822 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 40674 | 1 | Solanum lycopersicum peptidyl-prolyl cis-trans isomerase FKBP16-2, chloroplastic (SlFKBP16-2), long non-coding RNA | 4.021447721 |
| VdnRY2_5503 | 1 | 1 | 15 | 30 | uv|NGB00176.1:1-51 | 17 | 2 | Weak | Weak | Suspect[1,14]; | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 7 | 4.021447721 |
| VdnRY2_38601 | 1 | 1 | 342 | 357 | uv|KF718979.1:2206-6730 | 1585 | 1570 | Weak | Weak | Suspect[358,373]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum lycopersicum GATA transcription factor 26-like (LOC101246747), mRNA | 4.021447721 |
| CLCdnRY2_44218 | 1 | 1 | 345 | 360 | uv|EU186086.1:9349-10480-30 | 532 | 547 | Weak | Weak | Suspect[361,372]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum serine/threonine-protein kinase CDL1 (LOC102585340), mRNA | 4.032258065 |
| CLCdnRY9_5081 | 1 | 1 | 340 | 355 | uv|U13843.1:1887-9923 | 7731 | 7746 | Weak | Weak | Suspect[356,372]; | TRUE_BIOLOGICAL | 325454 | 1 | PREDICTED: Solanum tuberosum potassium transporter 8-like (LOC102586526), mRNA | 4.032258065 |
| VdnRY3_13072 | 1 | 1 | 349 | 364 | uv|M35007.1:1-864 | 79 | 94 | Weak | Weak | Suspect[365,372]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum UPF0481 protein At3g47200-like (LOC102582582), mRNA | 4.032258065 |
| CLCdnRY6_35240 | 1 | 1 | 348 | 364 | uv|J02459.1:1-48502-49 | 44940 | 44924 | Weak | Weak | Suspect[365,371]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum tuberosum putative membrane bound NAC transcription factor 2 mRNA, complete cds | 4.312668464 |
| CLCdnRY11_66935 | 1 | 1 | 15 | 30 | uv|Z32692.1:2323-5137 | 1039 | 1054 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum lycopersicum vacuolar sorting protein 18 (LOC101246251), mRNA | 4.043126685 |
| CLCdnRY1_42633 | 1 | 1 | 344 | 359 | uv|EU186086.1:9349-10480-30 | 532 | 547 | Weak | Weak | Suspect[360,371]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum serine/threonine-protein kinase CDL1 (LOC102585340), mRNA | 4.043126685 |
| VdnRY6_27710 | 1 | 1 | 350 | 366 | uv|J02459.1:1-48502-49 | 22836 | 22820 | Weak | Weak | Suspect[367,370]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum DNA-binding protein DDB_G0278111 (LOC102592706), mRNA | 4.324324324 |
| SdnRY1_58217 | 1 | 1 | 334 | 349 | uv|KF680545.1:1-2837 | 1038 | 1053 | Weak | Weak | Suspect[350,370]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 10 | 4.054054054 |
| VdnRY1_29045 | 1 | 1 | 341 | 356 | uv|M98046.1:2386-3803 | 882 | 897 | Weak | Weak | Suspect[357,370]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum tuberosum SnRK1 alpha subunit mRNA, complete cds | 4.054054054 |
| CLCdnRY1_53943 | 1 | 1 | 2 | 17 | uv|U02427.1:2631-2729 | 15 | 30 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch02, complete genome | 4.054054054 |
| CLCdnRY3_18312 | 1 | 1 | 15 | 30 | uv|AF379854.1:3-2710 | 706 | 691 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum tuberosum serine/threonine-protein kinase HT1-like (LOC102582891), mRNA | 4.054054054 |
| CLCdnRY5_57273 | 1 | 1 | 13 | 28 | uv|J01636.1:1-7477 | 5281 | 5266 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum alpha/beta hydrolase domain-containing protein 17B-like (LOC102583447), mRNA | 4.054054054 |
| CLCdnRY8_26076 | 1 | 1 | 22 | 37 | uv|AF327712.1:1582-7289 | 1094 | 1109 | Weak | Weak | Suspect[1,21]; | TRUE_BIOLOGICAL | 286 | 1 | PREDICTED: Solanum tuberosum flowering time control protein FY (LOC102597827), mRNA | 4.054054054 |
| VdnRY3_71779 | 1 | 1 | 340 | 355 | uv|AY568055.1:6692-7837 | 157 | 142 | Weak | Weak | Suspect[356,370]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102603960 (LOC102603960), mRNA | 4.054054054 |
| CLCdnRY7_9803 | 1 | 1 | 1 | 367 | uv|HQ245711.1:5539-7450 | 1221 | 855 | Strong | Strong | Suspect[368,369]; | NO_DATA | 1 | 1 | Cloning vector pPS-NR, complete sequence | 99.18699187 |
| CLCdnRY8_38832 | 1 | 1 | 352 | 369 | uv|M16192.1:1-2517-49 | 1574 | 1557 | Weak | Weak | None | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum pennellii phosphoribulokinase, chloroplastic (LOC107028386), mRNA | 4.60704607 |
| CLCdnRY4_48357 | 1 | 1 | 25 | 41 | uv|L08927.1:4048-4049-49 | 42 | 26 | Weak | Weak | Suspect[1,24]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum multisubstrate pseudouridine synthase 7 (LOC102592116), transcript variant X2, mRNA | 4.33604336 |
| VdnRY2_118306 | 1 | 1 | 344 | 360 | uv|JX181778.1:10266-10316-48 | 1 | 17 | Weak | Weak | Suspect[361,369]; | NO_DATA | 1 | 1 | Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-58o17 map 10, complete sequence | 4.33604336 |
| SdnRY1_58309 | 1 | 1 | 24 | 39 | uv|AY301066.1:1-1261 | 848 | 863 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 28105 | 1 | PREDICTED: Solanum tuberosum proline-rich receptor-like protein kinase PERK9 (LOC102585366), transcript variant X1, mRNA | 4.06504065 |
| VdnRY4_21012 | 1 | 1 | 340 | 355 | uv|KC702228.1:1-1023 | 25 | 40 | Weak | Weak | Suspect[356,369]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102599322), transcript variant X14, misc_RNA | 4.06504065 |
| CLCdnRY1_56671 | 1 | 1 | 350 | 365 | uv|J02459.1:1-48502-49 | 29136 | 29151 | Weak | Weak | Suspect[366,369]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102592988 (LOC102592988), mRNA | 4.06504065 |
| CLCdnRY6_43414 | 1 | 1 | 8 | 23 | uv|M37852.1:43-109 | 51 | 36 | Weak | Weak | Suspect[1,7]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum phosphoenolpyruvate carboxylase kinase 1-like (LOC102594673), mRNA | 4.06504065 |
| VdnRY7_22487 | 1 | 1 | 337 | 352 | uv|L08860.1:1134-1231 | 45 | 60 | Weak | Weak | Suspect[353,369]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum UDP-glycosyltransferase 79B8-like (LOC107061873), mRNA | 4.06504065 |
| CLCdnRY4_83745 | 1 | 1 | 82 | 147 | uv|JX025643.1:5074-5255 | 115 | 180 | Strong | Strong | None | NO_DATA | 1 | 1 | Cloning vector p35S::CASP2:GFP, complete sequence | 17.66304348 |
| CLCdnRY3_68694 | 1 | 1 | 19 | 35 | uv|NGB00413.1:4732-7508 | 238 | 222 | Weak | Weak | Suspect[1,18]; | TRUE_BIOLOGICAL | 12103 | 1 | PREDICTED: Solanum tuberosum extensin-2-like (LOC102601519), mRNA | 4.347826087 |
| SdnRY1_58405 | 1 | 1 | 337 | 353 | uv|U09476.1:1-864 | 87 | 103 | Weak | Weak | Suspect[354,368]; | TRUE_BIOLOGICAL | 581 | 1 | Solanum pennellii chromosome ch09, complete genome | 4.347826087 |
| VdnRY1_97598 | 1 | 1 | 333 | 349 | uv|DQ493881.2:2963-3059 | 35 | 19 | Weak | Weak | Suspect[350,368]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum exosome complex exonuclease RRP46 homolog (LOC102597142), mRNA | 4.347826087 |
| VdnRY3_61552 | 1 | 1 | 22 | 38 | uv|KC702183.1:1-1023 | 985 | 969 | Weak | Weak | Suspect[1,21]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum ammonium transporter 1 member 1 (LOC102578709), partial mRNA | 4.347826087 |
| CLCdnRY4_60582 | 1 | 1 | 4 | 19 | uv|U02452.1:1-991 | 354 | 339 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 558016 | 1 | Solanum lycopersicum cultivar I-3 chromosome 5 | 4.076086957 |
| CLCdnRY8_26237 | 1 | 1 | 18 | 33 | uv|KC702169.1:1-808 | 567 | 552 | Weak | Weak | Suspect[1,17]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum cysteine-rich receptor-like protein kinase 10 (LOC102603268), transcript variant X3, mRNA | 4.076086957 |
| SdnRY1_58425 | 1 | 1 | 349 | 364 | uv|J02459.1:1-48502-49 | 32815 | 32830 | Weak | Weak | Suspect[365,368]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch02, complete genome | 4.076086957 |
| SdnRY1_58440 | 1 | 1 | 351 | 366 | uv|KF719005.1:2205-5132 | 2144 | 2129 | Weak | Weak | Suspect[367,368]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum pennellii uncharacterized LOC107026825 (LOC107026825), transcript variant X23, ncRNA | 4.076086957 |
| CLCdnRY7_439 | 1 | 1 | 346 | 361 | uv|U09476.1:1-864 | 494 | 479 | Weak | Weak | Suspect[362,368]; | TRUE_BIOLOGICAL | 581 | 1 | PREDICTED: Solanum pennellii apolipoprotein A-I (LOC107028626), mRNA | 4.076086957 |
| CLCdnRY9_12908 | 1 | 1 | 20 | 35 | uv|JX560397.1:83-5970 | 2409 | 2394 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 1236 | 1 | PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g59040 (LOC102605894), transcript variant X2, mRNA | 4.076086957 |
| SdnRY1_58360 | 1 | 1 | 10 | 25 | uv|KM407508.1:753-839 | 9 | 24 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.076086957 |
| SdnRY1_58361 | 1 | 1 | 10 | 25 | uv|KM407508.1:753-839 | 9 | 24 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum lycopersicum O-fucosyltransferase family protein (LOC101246780), transcript variant X1, mRNA | 4.076086957 |
| SdnRY1_58512 | 1 | 1 | 110 | 139 | uv|NGB00051.1:1428-2848 | 1318 | 1289 | Weak | Weak | None | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102585618 (LOC102585618), ncRNA | 7.901907357 |
| CLCdnRY1_48421 | 1 | 1 | 8 | 25 | uv|AY753578.1:1-838 | 485 | 502 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 6181 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 4.632152589 |
| CLCdnRY11_59381 | 1 | 1 | 4 | 20 | uv|AF379854.1:3-2710 | 1519 | 1535 | Weak | Weak | Suspect[1,3]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.359673025 |
| CLCdnRY3_42159 | 1 | 1 | 7 | 23 | uv|JF909478.1:3849-4965 | 579 | 563 | Weak | Weak | Suspect[1,6]; | TRUE_BIOLOGICAL | 10639 | 1 | PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At5g62370 (LOC102601868), transcript variant X8, mRNA | 4.359673025 |
| CLCdnRY10_54393 | 1 | 1 | 17 | 32 | uv|KY031725.1:1-5101 | 2708 | 2723 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 82115 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102591624 (LOC102591624), transcript variant X6, mRNA | 4.08719346 |
| VdnRY6_22004 | 1 | 1 | 329 | 344 | uv|M18804.1:1-214 | 171 | 156 | Weak | Weak | Suspect[345,367]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum nuclear transcription factor Y subunit C-1-like (LOC102603380), mRNA | 4.08719346 |
| SdnRY1_58648 | 1 | 1 | 2 | 18 | uv|J02459.1:1-48502-49 | 41935 | 41919 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 10699 | 1 | 4.371584699 | |
| CLCdnRY8_8622 | 1 | 1 | 344 | 360 | uv|DQ883689.3:1-1994 | 1596 | 1612 | Weak | Weak | Suspect[361,366]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized protein sll1770 (LOC102587186), transcript variant X2, mRNA | 4.371584699 |
| VdnRY2_21194 | 1 | 1 | 17 | 33 | uv|AF123770.1:15289-15411 | 103 | 119 | Weak | Weak | Suspect[1,16]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch08, complete genome | 4.371584699 |
| CLCdnRY12_61398 | 1 | 1 | 344 | 359 | uv|M77169.1:820-5161 | 1077 | 1092 | Weak | Weak | Suspect[360,366]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum tuberosum FRIGIDA-like protein 3 (LOC102598110), transcript variant X4, mRNA | 4.098360656 |
| CLCdnRY12_91858 | 1 | 1 | 5 | 20 | uv|M16192.1:1-2517-49 | 1367 | 1382 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Nicotiana sylvestris uncharacterized LOC104225914 (LOC104225914), transcript variant X2, mRNA | 4.098360656 |
| CLCdnRY3_74811 | 1 | 1 | 338 | 353 | uv|JX069764.1:9156-9498 | 195 | 180 | Weak | Weak | Suspect[354,366]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At5g45780 (LOC102601304), transcript variant X2, mRNA | 4.098360656 |
| CLCdnRY6_93149 | 1 | 1 | 5 | 20 | uv|M16192.1:1-2517-49 | 1367 | 1382 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Nicotiana sylvestris uncharacterized LOC104225914 (LOC104225914), transcript variant X2, mRNA | 4.098360656 |
| VdnRY1_168643 | 1 | 1 | 333 | 348 | uv|J02459.1:1-48502-49 | 26606 | 26591 | Weak | Weak | Suspect[349,366]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum tuberosum clone RH066A20, complete sequence | 4.098360656 |
| CLCdnRY5_59796 | 1 | 1 | 4 | 20 | uv|AF379854.1:3-2710 | 1519 | 1535 | Weak | Weak | Suspect[1,3]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.383561644 |
| CLCdnRY10_77333 | 1 | 1 | 1 | 16 | uv|JX573199.1:4967-5095 | 85 | 70 | Weak | Weak | None | NO_DATA | 1 | 1 | 4.109589041 | |
| CLCdnRY12_8644 | 1 | 1 | 13 | 28 | uv|X06402.1:3128-3225 | 84 | 69 | Weak | Weak | Suspect[1,12]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum cytokinesis protein sepA-like (LOC102582165), mRNA | 4.109589041 |
| CLCdnRY12_38775 | 1 | 1 | 7 | 22 | uv|M17546.1:1-215 | 18 | 33 | Weak | Weak | Suspect[1,6]; | TRUE_BIOLOGICAL | 9030 | 1 | 4.109589041 | |
| CLCdnRY8_17382 | 1 | 1 | 11 | 26 | uv|JF909482.1:3850-8059 | 3985 | 3970 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum inactive poly [ADP-ribose] polymerase RCD1 (LOC102584569), transcript variant X3, mRNA | 4.109589041 |
| CLCdnRY9_63425 | 1 | 1 | 343 | 358 | uv|JX560397.1:83-5970 | 3441 | 3426 | Weak | Weak | Suspect[359,365]; | TRUE_BIOLOGICAL | 1236 | 1 | 4.109589041 | |
| VdnRY2_40772 | 1 | 1 | 326 | 341 | uv|AF379854.1:4263-5841 | 347 | 332 | Weak | Weak | Suspect[342,365]; | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum tuberosum copper transporter 6-like (LOC102591949), mRNA | 4.109589041 |
| VdnRY3_33928 | 1 | 1 | 337 | 352 | uv|L08860.1:1858-2910-49 | 688 | 703 | Weak | Weak | Suspect[353,365]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum guanine nucleotide exchange factor SPIKE 1 (LOC102590845), mRNA | 4.109589041 |
| VdnRY3_33928 | 1 | 1 | 323 | 338 | uv|M77169.1:820-5161 | 3879 | 3894 | None | Weak | Suspect[353,365]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum tuberosum guanine nucleotide exchange factor SPIKE 1 (LOC102590845), mRNA | 4.109589041 |
| CLCdnRY3_61916 | 1 | 1 | 10 | 26 | uv|EF036511.1:4679-4770 | 53 | 69 | Weak | Weak | Suspect[1,9]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum putative pentatricopeptide repeat-containing protein At1g74580 (LOC102585346), transcript variant X4, misc_RNA | 4.395604396 |
| CLCdnRY3_69796 | 1 | 1 | 24 | 40 | uv|KF718979.1:2206-6730 | 3636 | 3620 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum tuberosum chromosome 2 mitochondrion, complete sequence | 4.395604396 |
| CLCdnRY10_4657 | 1 | 1 | 20 | 35 | uv|AY568055.1:6692-7837 | 199 | 214 | Weak | Weak | Suspect[1,19];Suspect[362,364]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA | 4.120879121 |
| CLCdnRY10_4657 | 1 | 1 | 346 | 361 | uv|KM062047.1:4179-4302 | 74 | 59 | Weak | Weak | Suspect[1,19];Suspect[362,364]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA | 4.120879121 |
| CLCdnRY12_81213 | 1 | 1 | 336 | 351 | uv|AY568055.1:6692-7837 | 415 | 430 | Weak | Weak | Suspect[352,364]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 7 clone RHPOTKEY101K20, complete sequence | 4.120879121 |
| CLCdnRY3_20101 | 1 | 1 | 10 | 25 | uv|Z46234.1:664-3443 | 948 | 933 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 4892 | 1 | PREDICTED: Solanum tuberosum mitogen-activated protein kinase 9-like (LOC102586279), transcript variant X3, mRNA | 4.120879121 |
| VdnRY1_120075 | 1 | 1 | 12 | 27 | uv|AY962893.1:8266-9065 | 118 | 133 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 29487 | 1 | Solanum pennellii chromosome ch05, complete genome | 4.120879121 |
| CLCdnRY10_5568 | 1 | 1 | 329 | 344 | uv|DQ666274.1:249-3225 | 2735 | 2720 | Weak | Weak | Suspect[345,364]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102587364), transcript variant X7, mRNA | 4.120879121 |
| CLCdnRY12_10262 | 1 | 1 | 334 | 349 | uv|AF061931.1:2946-4188-49 | 1034 | 1019 | Weak | Weak | Suspect[350,364]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum probable inactive purple acid phosphatase 1 (LOC102595766), mRNA | 4.120879121 |
| CLCdnRY12_40414 | 1 | 1 | 347 | 362 | uv|GU593054.1:6136-8806 | 1311 | 1326 | Weak | Weak | Suspect[363,364]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum protease Do-like 9 (LOC102582796), mRNA | 4.120879121 |
| CLCdnRY6_63120 | 1 | 1 | 342 | 357 | uv|M77169.1:820-5161 | 1077 | 1092 | Weak | Weak | Suspect[358,364]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum tuberosum FRIGIDA-like protein 3 (LOC102598110), transcript variant X4, mRNA | 4.120879121 |
| CLCdnRY7_45003 | 1 | 1 | 334 | 349 | uv|DQ317695.1:1340-3572 | 554 | 539 | Weak | Weak | Suspect[350,364]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum vetispiradiene synthase 3-like (LOC102583484), mRNA | 4.120879121 |
| CLCdnRY9_21611 | 1 | 1 | 333 | 348 | uv|JN874480.1:11708-20103 | 6381 | 6396 | Weak | Weak | Suspect[349,364]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 1 mitochondrion, complete sequence | 4.120879121 |
| VdnRY1_29319 | 1 | 1 | 342 | 357 | uv|DQ666274.1:249-3225 | 2865 | 2850 | Weak | Weak | Suspect[358,364]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum pennellii BTB/POZ domain-containing protein At5g41330-like (LOC107026727), transcript variant X3, mRNA | 4.120879121 |
| VdnRY2_55112 | 1 | 1 | 345 | 360 | uv|JQ394800.1:4781-4893 | 26 | 11 | Weak | Weak | Suspect[361,364]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum leucine--tRNA ligase, cytoplasmic-like (LOC102583300), mRNA | 4.120879121 |
| VdnRY1_9310 | 1 | 1 | 6 | 22 | uv|J02400.1:1-5243-49 | 2921 | 2905 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 151341 | 1 | PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 17 (LOC102590225), mRNA | 4.407713499 |
| VdnRY1_133767 | 1 | 1 | 343 | 359 | uv|AF379854.1:3-2710 | 1474 | 1490 | Weak | Weak | Suspect[360,363]; | TRUE_BIOLOGICAL | 5820 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.407713499 |
| CLCdnRY11_74932 | 1 | 1 | 326 | 341 | uv|M77169.1:820-5161 | 2571 | 2586 | Weak | Weak | Suspect[342,363]; | TRUE_BIOLOGICAL | 1485 | 1 | 4.132231405 | |
| VdnRY1_9310 | 1 | 1 | 11 | 26 | uv|J01783.1:4575-7894-49 | 2906 | 2921 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 724 | 1 | PREDICTED: Solanum tuberosum zinc finger CCCH domain-containing protein 17 (LOC102590225), mRNA | 4.132231405 |
| CLCdnRY1_16725 | 1 | 1 | 4 | 19 | uv|FJ160466.1:1899-7260-49 | 4378 | 4363 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum transmembrane emp24 domain-containing protein p24beta3-like (LOC102593710), mRNA | 4.132231405 |
| CLCdnRY6_39851 | 1 | 1 | 14 | 29 | uv|EU186086.1:9349-10480-30 | 902 | 917 | Weak | Weak | Suspect[1,13]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized protein C630.12-like (LOC102589173), mRNA | 4.132231405 |
| CLCdnRY8_32412 | 1 | 1 | 13 | 28 | uv|NGB00587.1:1-3232 | 3002 | 3017 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102598761 (LOC102598761), transcript variant X2, mRNA | 4.132231405 |
| VdnRY6_31741 | 1 | 1 | 1 | 16 | uv|U75992.1:16925-19409 | 1809 | 1794 | Weak | Weak | None | TRUE_BIOLOGICAL | 10375 | 1 | PREDICTED: Solanum tuberosum alpha-amylase-like (LOC102582328), transcript variant X2, mRNA | 4.132231405 |
| SdnRY1_58973 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| SdnRY1_58974 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| SdnRY1_58975 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| SdnRY1_58978 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| SdnRY1_58979 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| SdnRY1_58980 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| SdnRY1_58981 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| SdnRY1_58982 | 1 | 1 | 272 | 312 | uv|KF719004.1:2204-2946 | 73 | 113 | Weak | Weak | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102600888), mRNA | 11.04972376 |
| CLCdnRY10_23475 | 1 | 1 | 334 | 351 | uv|J02459.1:1-48502-49 | 95 | 78 | Weak | Weak | Suspect[352,362]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum lycopersicum cultivar I-3 chromosome 10 | 4.696132597 |
| CLCdnRY7_1481 | 1 | 1 | 344 | 361 | uv|KF853602.1:1019-2932 | 1666 | 1683 | Weak | Weak | Suspect[362,362]; | TRUE_BIOLOGICAL | 7711 | 1 | Solanum tuberosum calmodulin 5/6/7/8-like protein mRNA, complete cds | 4.696132597 |
| CLCdnRY1_10703 | 1 | 1 | 2 | 18 | uv|L08862.1:1-2039 | 924 | 940 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum tuberosum chromosome 7 clone RHPOTKEY169K08, complete sequence | 4.419889503 |
| VdnRY4_5439 | 1 | 1 | 17 | 33 | uv|KF718989.1:2199-3181 | 435 | 419 | Weak | Weak | Suspect[1,16];Suspect[357,362]; | TRUE_BIOLOGICAL | 3700 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102590827 (LOC102590827), mRNA | 4.419889503 |
| CLCdnRY6_46521 | 1 | 1 | 15 | 30 | uv|NGB00587.1:1-3232 | 1175 | 1190 | Weak | Weak | Suspect[1,14]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102594734 (LOC102594734), mRNA | 4.143646409 |
| SdnRY1_59085 | 1 | 1 | 25 | 40 | uv|U02436.1:3152-4436 | 359 | 344 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107062487 (LOC107062487), ncRNA | 4.143646409 |
| CLCdnRY12_39287 | 1 | 1 | 20 | 35 | uv|KC702190.1:1-1136 | 534 | 549 | Weak | Weak | Suspect[1,19]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum RING-H2 finger protein ATL2 (LOC107063120), mRNA | 4.143646409 |
| CLCdnRY12_90525 | 1 | 1 | 337 | 352 | uv|U13843.1:1887-9923 | 7858 | 7843 | Weak | Weak | Suspect[353,362]; | TRUE_BIOLOGICAL | 325454 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102580662 (LOC102580662), transcript variant X3, ncRNA | 4.143646409 |
| CLCdnRY4_6889 | 1 | 1 | 339 | 354 | uv|U13843.1:1887-9923 | 5648 | 5663 | Weak | Weak | Suspect[355,362]; | TRUE_BIOLOGICAL | 325454 | 1 | PREDICTED: Solanum tuberosum phosphate transporter PHO1 homolog 3-like (LOC102604110), mRNA | 4.143646409 |
| CLCdnRY7_2304 | 1 | 1 | 15 | 30 | uv|AF102576.1:1-3461 | 3282 | 3297 | Weak | Weak | Suspect[1,14]; | NO_DATA | 1 | 1 | Solanum chacoense plasma membrane intrinsic protein PIP2 mRNA, complete cds | 4.143646409 |
| CLCdnRY7_28345 | 1 | 1 | 19 | 34 | uv|U13864.1:2748-4229-44 | 220 | 205 | Weak | Weak | Suspect[1,18]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum tuberosum chromosome 9 clone RH186C17, complete sequence | 4.143646409 |
| VdnRY1_113683 | 1 | 1 | 22 | 37 | uv|KC702219.1:1-1059 | 519 | 504 | Weak | Weak | Suspect[1,21]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107057799 (LOC107057799), transcript variant X2, ncRNA | 4.143646409 |
| VdnRY4_5439 | 1 | 1 | 341 | 356 | uv|J02400.1:1-5243-49 | 1913 | 1928 | Weak | Weak | Suspect[1,16];Suspect[357,362]; | TRUE_BIOLOGICAL | 151341 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102590827 (LOC102590827), mRNA | 4.143646409 |
| CLCdnRY5_6622 | 1 | 1 | 326 | 342 | uv|L08876.1:690-1006 | 278 | 262 | Weak | Weak | Suspect[343,361]; | NO_DATA | 1 | 1 | Solanum tuberosum clone StDT28 cytochrome c mRNA, complete cds | 4.432132964 |
| CLCdnRY10_17027 | 1 | 1 | 24 | 40 | uv|M77169.1:820-5161 | 3761 | 3745 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum tuberosum UPF0051 protein ABCI8, chloroplastic-like (LOC102590382), mRNA | 4.432132964 |
| CLCdnRY2_54650 | 1 | 1 | 327 | 343 | uv|AB669567.1:641-3111 | 360 | 376 | Weak | Weak | Suspect[344,361]; | NO_DATA | 1 | 1 | PREDICTED: Solanum pennellii WPP domain-associated protein-like (LOC107012052), transcript variant X3, mRNA | 4.432132964 |
| CLCdnRY11_22594 | 1 | 1 | 345 | 360 | uv|J02459.1:1-48502-49 | 25311 | 25326 | Weak | Weak | Suspect[361,361]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial (LOC102602262), mRNA | 4.155124654 |
| VdnRY6_26331 | 1 | 1 | 328 | 343 | uv|KC702209.1:1-2022 | 158 | 173 | Weak | Weak | Suspect[344,361]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum probable methyltransferase PMT14 (LOC102599529), transcript variant X2, mRNA | 4.155124654 |
| CLCdnRY11_34951 | 1 | 1 | 333 | 348 | uv|U89935.1:1389-1487 | 68 | 53 | Weak | Weak | Suspect[349,361]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum pennellii benzyl alcohol O-benzoyltransferase (LOC107024360), mRNA | 4.155124654 |
| CLCdnRY12_10057 | 1 | 1 | 8 | 23 | uv|KF719005.1:2205-5132 | 1648 | 1663 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum delta(12) oleic acid desaturase FAD2-like (LOC102598608), mRNA | 4.155124654 |
| CLCdnRY2_56007 | 1 | 1 | 21 | 36 | uv|JN874480.1:1050-2714 | 852 | 837 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 3701 | 1 | 4.155124654 | |
| VdnRY3_100526 | 1 | 1 | 5 | 20 | uv|U29899.1:1847-4463 | 953 | 938 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 4892 | 1 | PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 24 (LOC102596658), transcript variant X2, mRNA | 4.155124654 |
| CLCdnRY10_28372 | 1 | 1 | 323 | 340 | uv|M98046.1:2386-3803 | 402 | 419 | Weak | Weak | Suspect[341,360]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum EIN3-binding F-box protein 1-like (LOC102604327), mRNA | 4.722222222 |
| VdnRY3_69821 | 1 | 1 | 12 | 28 | uv|X06779.1:1-4734 | 747 | 763 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 7215 | 1 | PREDICTED: Solanum pennellii probable methyltransferase PMT13 (LOC107007951), mRNA | 4.444444444 |
| CLCdnRY1_40322 | 1 | 1 | 24 | 39 | uv|AF102576.1:1-3461 | 3277 | 3292 | Weak | Weak | Suspect[1,23]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.166666667 |
| VdnRY2_29199 | 1 | 1 | 22 | 37 | uv|JN874480.1:11708-20103 | 7073 | 7088 | Weak | Weak | Suspect[1,21]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA | 4.166666667 |
| CLCdnRY8_18269 | 1 | 1 | 337 | 352 | uv|M28248.1:1-1709 | 486 | 471 | Weak | Weak | Suspect[353,360]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like (LOC102580777), transcript variant X2, mRNA | 4.166666667 |
| VdnRY2_29201 | 1 | 1 | 22 | 37 | uv|JN874480.1:11708-20103 | 7073 | 7088 | Weak | Weak | Suspect[1,21]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum 14-3-3 protein 7 (LOC102581950), mRNA | 4.166666667 |
| SdnRY1_59331 | 1 | 1 | 15 | 32 | uv|GU827641.1:1944-2103 | 68 | 51 | Weak | Weak | Suspect[1,14]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107060628 (LOC107060628), ncRNA | 4.735376045 |
| CLCdnRY12_56533 | 1 | 1 | 22 | 38 | uv|KF718989.1:2199-3181 | 108 | 124 | Weak | Weak | Suspect[1,21]; | TRUE_BIOLOGICAL | 3700 | 1 | Solanum lycopersicum cDNA, clone: LEFL1023BB02, HTC in leaf | 4.456824513 |
| CLCdnRY12_42335 | 1 | 1 | 13 | 28 | uv|DQ058733.1:11-150 | 51 | 36 | Weak | Weak | Suspect[1,12]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum probable protein arginine N-methyltransferase 1 (LOC102585349), transcript variant X2, mRNA | 4.178272981 |
| CLCdnRY2_21126 | 1 | 1 | 10 | 25 | uv|AF013258.1:940-1118 | 24 | 9 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 40674 | 1 | PREDICTED: Solanum tuberosum putative F-box protein At3g10430 (LOC107062293), transcript variant X1, mRNA | 4.178272981 |
| VdnRY1_20360 | 1 | 1 | 320 | 335 | uv|DQ317695.1:1340-3572 | 258 | 243 | Weak | Weak | Suspect[336,359]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum lycopersicum cultivar I-3 chromosome 10 | 4.178272981 |
| VdnRY5_565 | 1 | 1 | 320 | 335 | uv|Z32692.1:2323-5137 | 1591 | 1606 | Weak | Weak | Suspect[336,359]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum pennellii chromosome ch04, complete genome | 4.178272981 |
| CLCdnRY12_20956 | 1 | 1 | 12 | 30 | uv|X06779.1:1-4734 | 4721 | 4703 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 7215 | 1 | PREDICTED: Solanum tuberosum uncharacterized protein ycf45 (LOC102605144), mRNA | 5.027932961 |
| CLCdnRY1_49556 | 1 | 1 | 22 | 38 | uv|X70276.1:4179-4959 | 475 | 459 | Weak | Weak | Suspect[1,21]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum uncharacterized protein At1g51745-like (LOC102596664), mRNA | 4.469273743 |
| CLCdnRY12_20956 | 1 | 1 | 1 | 16 | uv|KC702234.1:1-1022 | 350 | 365 | Weak | Moderate | None | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum uncharacterized protein ycf45 (LOC102605144), mRNA | 4.189944134 |
| CLCdnRY11_51955 | 1 | 1 | 330 | 345 | uv|KF718996.1:2914-4532 | 132 | 147 | Weak | Weak | Suspect[346,358]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum putative serine/threonine-protein kinase-like protein CCR3 (LOC102601082), transcript variant X2, mRNA | 4.189944134 |
| CLCdnRY1_44314 | 1 | 1 | 12 | 27 | uv|M77169.1:820-5161 | 3869 | 3884 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum pennellii chromosome ch05, complete genome | 4.189944134 |
| CLCdnRY3_29419 | 1 | 1 | 328 | 343 | uv|NGB00587.1:1-3232 | 1184 | 1169 | Weak | Weak | Suspect[344,358]; | NO_DATA | 1 | 1 | 4.189944134 | |
| CLCdnRY5_57725 | 1 | 1 | 12 | 27 | uv|HM640258.1:317-2913 | 733 | 718 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 5073 | 1 | PREDICTED: Solanum tuberosum biotin--protein ligase 2-like (LOC102584525), mRNA | 4.189944134 |
| VdnRY1_43860 | 1 | 1 | 16 | 31 | uv|U59231.1:8434-10310-48 | 1160 | 1145 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 5658 | 1 | Capsicum pubescens chloroplast, complete genome | 4.189944134 |
| CLCdnRY4_58723 | 1 | 1 | 210 | 250 | uv|KF719004.1:2204-2946 | 73 | 113 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | S.tuberosum rbcS3 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit | 11.20448179 |
| CLCdnRY3_27372 | 1 | 1 | 16 | 32 | uv|NGB00402.1:644-1577 | 122 | 138 | Weak | Weak | Suspect[1,15]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 11 clone RH195J04, complete sequence | 4.481792717 |
| CLCdnRY9_28781 | 1 | 1 | 16 | 32 | uv|NGB00402.1:644-1577 | 122 | 138 | Weak | Weak | Suspect[1,15]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 11 clone RH195J04, complete sequence | 4.481792717 |
| CLCdnRY2_50272 | 1 | 1 | 19 | 34 | uv|U75992.1:4807-5386 | 351 | 366 | Weak | Weak | Suspect[1,18]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 2 | 4.201680672 |
| VdnRY1_156798 | 1 | 1 | 334 | 349 | uv|M77169.1:820-5161 | 361 | 376 | Weak | Weak | Suspect[350,357]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum pennellii uncharacterized LOC107004516 (LOC107004516), transcript variant X2, misc_RNA | 4.201680672 |
| CLCdnRY1_55850 | 1 | 1 | 16 | 31 | uv|DQ133906.1:2593-3425-49 | 124 | 109 | Weak | Weak | Suspect[1,15]; | NO_DATA | 1 | 1 | 4.201680672 | |
| CLCdnRY5_24817 | 1 | 1 | 338 | 353 | uv|KF718979.1:2206-6730 | 3666 | 3651 | Weak | Weak | Suspect[354,357]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum pectin acetylesterase 8-like (LOC102593635), mRNA | 4.201680672 |
| SdnRY1_59522 | 1 | 1 | 10 | 25 | uv|KM407508.1:753-839 | 9 | 24 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum uncharacterized protein At1g04910 (LOC102604866), transcript variant X1, mRNA | 4.201680672 |
| VdnRY6_39837 | 1 | 1 | 336 | 351 | uv|U89960.1:4738-7717 | 879 | 894 | Weak | Weak | Suspect[352,357]; | TRUE_BIOLOGICAL | 4892 | 1 | Solanum lycopersicum cDNA, clone: LEFL1077CE04, HTC in leaf | 4.201680672 |
| VdnRY1_1660 | 1 | 1 | 120 | 172 | uv|KF719004.1:2204-2946 | 61 | 113 | Strong | Strong | None | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 1, chloroplastic-like (LOC102577450), mRNA | 14.60674157 |
| SdnRY1_59725 | 1 | 1 | 16 | 32 | uv|X70481.1:3564-4492 | 256 | 240 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107063455 (LOC107063455), transcript variant X3, ncRNA | 4.494382022 |
| VdnRY7_20572 | 1 | 1 | 341 | 356 | uv|KC702198.1:1-1023 | 113 | 98 | Weak | Weak | None | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum pennellii triose phosphate/phosphate translocator, chloroplastic (LOC107002248), mRNA | 4.213483146 |
| VdnRY1_13803 | 1 | 1 | 17 | 32 | uv|FJ750577.1:368-2560 | 593 | 608 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 4447 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102601222 (LOC102601222), mRNA | 4.213483146 |
| VdnRY3_21878 | 1 | 1 | 327 | 342 | uv|KC702228.1:1-1023 | 25 | 40 | Weak | Weak | Suspect[343,356]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102582531), transcript variant X14, mRNA | 4.213483146 |
| VdnRY4_19375 | 1 | 1 | 21 | 36 | uv|AF050464.1:204-355 | 49 | 64 | Weak | Weak | Suspect[1,20]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum carboxypeptidase Y (LOC102604152), mRNA | 4.213483146 |
| VdnRY7_13277 | 1 | 1 | 329 | 344 | uv|J02459.1:1-48502-49 | 21813 | 21828 | Weak | Weak | Suspect[345,356]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum prostamide/prostaglandin F synthase (LOC102585914), mRNA | 4.213483146 |
| CLCdnRY11_83284 | 1 | 1 | 4 | 21 | uv|NGB00412.1:1-1359 | 242 | 259 | Weak | Weak | Suspect[1,3]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum auxin-responsive protein SAUR68-like (LOC107061000), mRNA | 4.788732394 |
| CLCdnRY1_46567 | 1 | 1 | 7 | 23 | uv|M35007.1:1-864 | 704 | 720 | Weak | Weak | Suspect[1,6]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.507042254 |
| CLCdnRY1_57481 | 1 | 1 | 319 | 335 | uv|KY031729.1:6650-6748 | 55 | 71 | Weak | Weak | Suspect[336,355]; | TRUE_BIOLOGICAL | 1386 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.507042254 |
| CLCdnRY12_36710 | 1 | 1 | 324 | 340 | uv|U89961.1:1-4240 | 2329 | 2345 | Weak | Weak | Suspect[341,355]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum lycopersicum pyridoxal reductase, chloroplastic (LOC101244752), transcript variant X2, mRNA | 4.507042254 |
| CLCdnRY4_62404 | 1 | 1 | 338 | 354 | uv|HM640258.1:3527-5744 | 164 | 180 | Weak | Weak | Suspect[355,355]; | TRUE_BIOLOGICAL | 5052 | 1 | PREDICTED: Solanum lycopersicum cytochrome P450 CYP72A219-like (LOC101263726), mRNA | 4.507042254 |
| VdnRY1_3437 | 1 | 1 | 6 | 22 | uv|JF909482.1:3850-8059 | 1719 | 1703 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum pennellii delta(12)-fatty-acid desaturase FAD2-like (LOC107007614), transcript variant X1, mRNA | 4.507042254 |
| CLCdnRY11_65843 | 1 | 1 | 18 | 33 | uv|EF456735.1:7106-7196 | 62 | 77 | Weak | Weak | Suspect[1,17]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum glycine-rich cell wall structural protein 1.0-like (LOC107058936), mRNA | 4.225352113 |
| CLCdnRY3_23454 | 1 | 1 | 320 | 335 | uv|HM640258.1:3527-5744 | 1286 | 1301 | Weak | Weak | Suspect[336,355]; | TRUE_BIOLOGICAL | 5052 | 1 | Solanum pennellii chromosome ch03, complete genome | 4.225352113 |
| VdnRY1_121592 | 1 | 1 | 334 | 349 | uv|X51450.1:2521-3852 | 711 | 726 | Weak | Weak | Suspect[350,355]; | TRUE_BIOLOGICAL | 91061 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102602653 (LOC102602653), mRNA | 4.225352113 |
| VdnRY7_9661 | 1 | 1 | 17 | 32 | uv|EU496101.1:2181-2269 | 43 | 58 | Weak | Weak | Suspect[1,16]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102581330 (LOC102581330), mRNA | 4.225352113 |
| SdnRY1_59959 | 1 | 1 | 20 | 36 | uv|JN581377.1:606-767 | 115 | 131 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum chromosome ch01, complete genome | 4.519774011 |
| CLCdnRY10_4658 | 1 | 1 | 20 | 35 | uv|AY568055.1:6692-7837 | 199 | 214 | Weak | Weak | Suspect[1,19];Suspect[351,354]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA | 4.237288136 |
| CLCdnRY10_4658 | 1 | 1 | 335 | 350 | uv|KM062047.1:4179-4302 | 74 | 59 | Weak | Weak | Suspect[1,19];Suspect[351,354]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum rac-like GTP-binding protein 5 (LOC102598995), mRNA | 4.237288136 |
| CLCdnRY3_4418 | 1 | 1 | 335 | 350 | uv|U13860.1:6124-7626-49 | 191 | 176 | Weak | Weak | Suspect[351,354]; | TRUE_BIOLOGICAL | 140052 | 1 | PREDICTED: Solanum tuberosum 40S ribosomal protein S11-like (LOC102585207), mRNA | 4.237288136 |
| VdnRY1_136881 | 1 | 1 | 327 | 342 | uv|AY568055.1:6692-7837 | 96 | 111 | Weak | Weak | Suspect[343,354]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum ankyrin repeat domain-containing protein 13A (LOC102591768), transcript variant X3, mRNA | 4.237288136 |
| VdnRY4_57740 | 1 | 1 | 338 | 353 | uv|KC702236.1:1-1024 | 217 | 202 | Weak | Weak | Suspect[354,354]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum probable carboxylesterase 2 (LOC102602233), mRNA | 4.237288136 |
| CLCdnRY9_30620 | 1 | 1 | 160 | 312 | uv|JF909467.1:4676-4959 | 214 | 58 | Strong | Strong | Suspect[313,353]; | NO_DATA | 1 | 1 | Potato light-inducible tissue-specific ST-LS1 gene | 43.05949008 |
| VdnRY1_23210 | 1 | 1 | 4 | 22 | uv|U67875.1:6835-8216 | 941 | 959 | Moderate | Moderate | Suspect[1,3]; | TRUE_BIOLOGICAL | 4895 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 5.099150142 |
| VdnRY6_31777 | 1 | 1 | 12 | 28 | uv|J02400.1:1-5243-49 | 2921 | 2905 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 151341 | 1 | PREDICTED: Solanum tuberosum prostatic spermine-binding protein-like (LOC107061103), mRNA | 4.532577904 |
| CLCdnRY11_47045 | 1 | 1 | 330 | 345 | uv|HM162842.2:1904-2262 | 49 | 34 | Weak | Weak | Suspect[346,353]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum probable 2-carboxy-D-arabinitol-1-phosphatase (LOC102592219), mRNA | 4.249291785 |
| CLCdnRY12_64516 | 1 | 1 | 334 | 349 | uv|NGB00620.1:1854-2089 | 7 | 22 | Weak | Weak | Suspect[350,353]; | TRUE_BIOLOGICAL | 4930 | 1 | 4.249291785 | |
| CLCdnRY12_81029 | 1 | 1 | 25 | 40 | uv|KF680544.1:323-942 | 516 | 501 | Weak | Weak | Suspect[1,24]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 9 | 4.249291785 |
| VdnRY1_64706 | 1 | 1 | 330 | 345 | uv|U16857.1:2678-3227 | 331 | 346 | Weak | Weak | Suspect[346,353]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum lycopersicum cultivar I-3 chromosome 2 | 4.249291785 |
| VdnRY1_130127 | 1 | 1 | 314 | 329 | uv|JF909482.1:3850-8059 | 3906 | 3921 | Weak | Weak | Suspect[330,353]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102597707 (LOC102597707), transcript variant X2, mRNA | 4.249291785 |
| VdnRY2_4587 | 1 | 1 | 324 | 339 | uv|L00595.1:1-393 | 370 | 355 | Weak | Weak | Suspect[340,353]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107057847 (LOC107057847), mRNA | 4.249291785 |
| VdnRY4_44983 | 1 | 1 | 5 | 20 | uv|M28248.1:1-1709 | 1481 | 1496 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 153135 | 1 | PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g26790, mitochondrial (LOC102582865), transcript variant X8, misc_RNA | 4.249291785 |
| CLCdnRY10_81368 | 1 | 1 | 314 | 329 | uv|M74186.1:2188-2959 | 273 | 258 | Weak | Weak | Suspect[330,353]; | TRUE_BIOLOGICAL | 1279 | 1 | 4.249291785 | |
| CLCdnRY11_72854 | 1 | 1 | 17 | 32 | uv|JX560397.1:83-5970 | 4514 | 4499 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 1236 | 1 | 4.249291785 | |
| CLCdnRY3_29412 | 1 | 1 | 317 | 332 | uv|Z22671.1:1221-1388 | 31 | 16 | Weak | Weak | Suspect[333,353]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch08, complete genome | 4.249291785 |
