Selected Cell
Cell:
Value:
Sheet1
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
ID | Genus_of_query_if_known,_or_1_otherwise | Species_of_query_if_known,_or_1_otherwise | Lower_end_of_the_alignment_in_the_vector | Upper_end_of_the_alignment_in_the_vector | Matching_vector,_starting_with_uv| | One_end_of_the_alignment_in_the_vector | The_other_end_of_the_alignment_in_the_vector | The_strength_of_this_vecscreen_match_ | The_strength_of_the_strongest_vecscreen_match_for_this_query | Whether_there_is_any_dangling_part_(called_"Suspect"_by_vecscreen)_at_either_end_of_the_query | the_classification_of_the_match | Most_pertinent_taxid_of_the_vector_interval_ | Lowest_common_ancestor_of_column_2_and_column_13 | blastn_desc | coverage |
CLCdnDe9_123440 | 1 | 1 | 1 | 2112 | uv|J02482.1:1-5386-49 | 2056 | 4167 | Strong | Strong | None | TRUE_BIOLOGICAL | 10842 | 1 | Anderseniella sp. Alg231_50 genome assembly, chromosome: VII | 99.95265152 |
CLCdnDe14_152208 | 1 | 1 | 5 | 733 | uv|J01749.1:1-4361-49 | 2510 | 3238 | Strong | Strong | Suspect[1,4]; | TRUE_BIOLOGICAL | 620 | 1 | Synthetic construct plasmid pUB1392, complete sequence | 99.31787176 |
CLCdnDe2_127443 | 1 | 1 | 5 | 461 | uv|J01749.1:1-4361-49 | 3776 | 4232 | Strong | Strong | Suspect[1,4]; | TRUE_BIOLOGICAL | 561 | 1 | Moss transformation vector pT2GX6 DNA, complete sequence | 98.9154013 |
CLCdnDe11_105923 | 1 | 1 | 3 | 410 | uv|J01749.1:1-4361-49 | 3773 | 3366 | Strong | Strong | Suspect[1,2];Suspect[411,414]; | TRUE_BIOLOGICAL | 460517 | 1 | Moss transformation vector pT2GX6 DNA, complete sequence | 98.30917874 |
CLCdnDe10_134201 | 1 | 1 | 116 | 5386 | uv|J02482.1:1-5386-49 | 5435 | 165 | Strong | Strong | None | TRUE_BIOLOGICAL | 10842 | 1 | Sphingorhabdus sp. Alg231_15 genome assembly, chromosome: II | 97.8462681 |
CLCdnDe10_111908 | 1 | 1 | 17 | 340 | uv|U28417.1:1-944 | 763 | 440 | Strong | Strong | None | TRUE_BIOLOGICAL | 10639 | 1 | Gateway vector R4L1pMpGWB495 DNA, complete sequence | 95 |
CLCdnDe10_111908 | 1 | 1 | 25 | 340 | uv|X05868.1:1-340 | 340 | 24 | Strong | Strong | None | TRUE_BIOLOGICAL | 10639 | 1 | Gateway vector R4L1pMpGWB495 DNA, complete sequence | 92.64705882 |
CLCdnDe12_170304 | 1 | 1 | 67 | 1067 | uv|KY031734.1:7505-8698 | 151 | 1151 | Strong | Strong | None | NO_DATA | 1 | 1 | Gateway vector R4L1pMpGWB195 DNA, complete sequence | 90.99181074 |
CLCdnDe5_175235 | 1 | 1 | 68 | 1068 | uv|KY031734.1:7505-8698 | 151 | 1151 | Strong | Strong | None | NO_DATA | 1 | 1 | Gateway vector R4L1pMpGWB195 DNA, complete sequence | 90.90909091 |
CLCdnDe13_27174 | 1 | 1 | 53 | 256 | uv|AY568055.1:9139-10024 | 61 | 264 | Strong | Strong | Suspect[257,267]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 76.02996255 |
CLCdnDe1_27117 | 1 | 1 | 39 | 275 | uv|U89963.1:302-749 | 116 | 352 | Strong | Strong | Suspect[1,14];Suspect[33,38];Suspect[276,316]; | TRUE_BIOLOGICAL | 10292 | 1 | Moss transformation vector pT2GX6 DNA, complete sequence | 74.6835443 |
VdnDe2_146309 | 1 | 1 | 252 | 1076 | uv|U37573.1:2706-4083 | 501 | 1325 | Strong | Strong | Suspect[86,91]; | TRUE_BIOLOGICAL | 9443 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 72.72727273 |
VdnDe3_122292 | 1 | 1 | 252 | 1076 | uv|U37573.1:2706-4083 | 501 | 1325 | Strong | Strong | Suspect[86,91]; | TRUE_BIOLOGICAL | 9443 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 72.72727273 |
CLCdnDe10_100790 | 1 | 1 | 91 | 1091 | uv|KY031734.1:7505-8698 | 1151 | 151 | Strong | Strong | None | NO_DATA | 1 | 1 | Gateway vector R4L1pMpGWB195 DNA, complete sequence | 70.92198582 |
VdnDe4_81233 | 1 | 1 | 58 | 882 | uv|U37573.1:2706-4083 | 1325 | 501 | Strong | Strong | Suspect[1069,1075]; | TRUE_BIOLOGICAL | 9443 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 69.88973707 |
VdnDe1_157250 | 1 | 1 | 252 | 1022 | uv|U37573.1:2706-4083 | 501 | 1271 | Strong | Strong | Suspect[86,91];Suspect[1023,1061]; | TRUE_BIOLOGICAL | 9443 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 68.99641577 |
TDe_comp968570_c0_seq1 | 1 | 1 | 141 | 348 | uv|Z22761.1:1-5585 | 3683 | 3476 | Strong | Strong | None | TRUE_BIOLOGICAL | 10088 | 1 | Mus musculus endogenous virus Murine endogenous virus Emv3, complete sequence | 59.48275862 |
VdnDe6_112095 | 1 | 1 | 1 | 233 | uv|NGB00350.1:415-785 | 233 | 1 | Strong | Strong | Suspect[426,435]; | TRUE_BIOLOGICAL | 620 | 1 | Cloning vector pCRm-luc2-PHLEO, complete sequence | 53.33333333 |
VdnDe6_112209 | 1 | 1 | 82 | 311 | uv|J01636.1:1-7477 | 1069 | 1298 | Strong | Strong | Suspect[421,441]; | TRUE_BIOLOGICAL | 620 | 1 | Cloning vector pCPC52, complete sequence | 51.92743764 |
TDe_comp108413_c3_seq3 | 1 | 1 | 534 | 1215 | uv|DQ666274.1:249-3225 | 964 | 282 | Strong | Strong | Suspect[1,49];Suspect[169,215];Suspect[461,465];Suspect[1307,1311]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 50.85884989 |
VdnDe3_6515 | 1 | 1 | 652 | 1333 | uv|DQ666274.1:249-3225 | 964 | 282 | Strong | Strong | Suspect[287,333];Suspect[579,583]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 48.05928017 |
VdnDe3_175753 | 1 | 1 | 78 | 157 | uv|JN874480.1:6795-9434 | 178 | 97 | Strong | Strong | Suspect[158,173]; | TRUE_BIOLOGICAL | 4107 | 1 | 45.66473988 | |
VdnDe2_68942 | 1 | 1 | 154 | 320 | uv|AY568055.1:9139-10024 | 61 | 227 | Strong | Strong | Suspect[1,32];Suspect[321,321]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 43.7994723 |
CLCdnDe10_106673 | 1 | 1 | 115 | 419 | uv|Z22761.1:1-5585 | 3953 | 4257 | Strong | Strong | None | TRUE_BIOLOGICAL | 153135 | 1 | Xenotropic murine leukemia virus isolate LAPC4, complete genome | 42.39888424 |
VdnDe6_112095 | 1 | 1 | 187 | 360 | uv|FJ160466.1:291-809 | 287 | 114 | Strong | Strong | Suspect[426,435]; | TRUE_ARTIFICIAL | 81077 | 81077 | Cloning vector pCRm-luc2-PHLEO, complete sequence | 39.77011494 |
CLCdnDe12_169897 | 1 | 1 | 463 | 820 | uv|AF078810.1:1718-2095 | 358 | 1 | Strong | Strong | Suspect[1,2];Suspect[939,980]; | TRUE_BIOLOGICAL | 460517 | 1 | Gateway Entry vector pWY102, complete sequence | 36.42857143 |
VdnDe2_68942 | 1 | 1 | 33 | 153 | uv|NGB00127.1:1-260 | 138 | 18 | Strong | Strong | Suspect[1,32];Suspect[321,321]; | TRUE_BIOLOGICAL | 10699 | 1 | Cloning vector pHELLSGATE | 31.66226913 |
VdnDe6_112209 | 1 | 1 | 281 | 416 | uv|NGB00107.1:1-236 | 1 | 136 | Strong | Strong | Suspect[421,441]; | TRUE_BIOLOGICAL | 620 | 1 | Cloning vector pCPC52, complete sequence | 30.6122449 |
VdnDe6_112209 | 1 | 1 | 187 | 318 | uv|JF909454.1:4200-4428 | 229 | 97 | Strong | Strong | Suspect[421,441]; | TRUE_BIOLOGICAL | 620 | 1 | Cloning vector pCPC52, complete sequence | 29.70521542 |
CLCdnDe2_62157 | 1 | 1 | 16 | 95 | uv|JN874480.1:6795-9434 | 97 | 178 | Strong | Strong | None | TRUE_BIOLOGICAL | 4107 | 1 | Solanum havanense isolate LB642 granule-bound starch synthase gene, exons 3 through 11 and partial cds | 26.8707483 |
CLCdnDe10_94285 | 1 | 1 | 200 | 279 | uv|JN874480.1:6795-9434 | 178 | 97 | Strong | Strong | Suspect[280,296]; | TRUE_BIOLOGICAL | 4107 | 1 | Solanum etuberosum isolate Spooner1 granule-bound starch synthase gene, exons 3 through 11 and partial cds | 26.68918919 |
CLCdnDe13_170744 | 1 | 1 | 66 | 115 | uv|KF719004.1:2204-2946 | 61 | 110 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | Solanum lycopersicum ribulose bisphosphate carboxylase small chain 3B, chloroplastic-like (Rbcs-3B), mRNA | 23.55769231 |
VdnDe6_112095 | 1 | 1 | 318 | 418 | uv|EU729726.1:155-394 | 240 | 140 | Strong | Strong | Suspect[426,435]; | TRUE_ARTIFICIAL | 81077 | 81077 | Cloning vector pCRm-luc2-PHLEO, complete sequence | 22.98850575 |
VdnDe5_63682 | 1 | 1 | 1218 | 1575 | uv|AF078810.1:1718-2095 | 1 | 358 | Strong | Strong | None | TRUE_BIOLOGICAL | 460517 | 1 | PREDICTED: Solanum tuberosum transcription factor MYB44-like (LOC102581745), mRNA | 22.25685786 |
VdnDe4_28174 | 1 | 1 | 2 | 37 | uv|KF719014.1:2590-2954 | 180 | 215 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 163743 | 1 | S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit | 21.47239264 |
VdnDe6_112209 | 1 | 1 | 38 | 130 | uv|X65312.3:273-365 | 93 | 1 | Strong | Strong | Suspect[421,441]; | TRUE_BIOLOGICAL | 620 | 1 | Cloning vector pCPC52, complete sequence | 20.861678 |
CLCdnDe12_169897 | 1 | 1 | 724 | 924 | uv|EU182593.1:176-1026 | 273 | 73 | Strong | Strong | Suspect[1,2];Suspect[939,980]; | TRUE_BIOLOGICAL | 460517 | 1 | Gateway Entry vector pWY102, complete sequence | 20.40816327 |
CLCdnDe1_9872 | 1 | 1 | 327 | 418 | uv|JN874480.1:6795-9434 | 2496 | 2587 | Strong | Strong | Suspect[419,455]; | TRUE_BIOLOGICAL | 40674 | 1 | Gateway binary vector pGWB501_TOPX DNA, complete sequence | 20 |
VdnDe2_165076 | 1 | 1 | 195 | 382 | uv|FJ160466.1:291-809 | 114 | 300 | Strong | Strong | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum receptor-like protein kinase HSL1 (LOC102594843), mRNA | 19.68421053 |
VdnDe6_112209 | 1 | 1 | 1 | 86 | uv|J01749.1:1-4361-49 | 2432 | 2347 | Strong | Strong | Suspect[421,441]; | TRUE_BIOLOGICAL | 620 | 1 | Cloning vector pCPC52, complete sequence | 19.27437642 |
CLCdnDe13_27174 | 1 | 1 | 1 | 52 | uv|NGB00127.1:1-260 | 69 | 18 | Strong | Strong | Suspect[257,267]; | TRUE_BIOLOGICAL | 10699 | 1 | Cloning vector pHELLSGATE | 19.1011236 |
VdnDe4_77386 | 1 | 1 | 30 | 387 | uv|AF078810.1:1718-2095 | 358 | 1 | Strong | Strong | None | TRUE_BIOLOGICAL | 460517 | 1 | PREDICTED: Solanum tuberosum transcription factor MYB44-like (LOC102581745), mRNA | 19.06033102 |
CLCdnDe10_111908 | 1 | 1 | 1 | 65 | uv|JX992843.1:12803-12899 | 33 | 97 | Strong | Strong | None | TRUE_BIOLOGICAL | 10639 | 1 | Gateway vector R4L1pMpGWB495 DNA, complete sequence | 18.82352941 |
CLCdnDe12_169897 | 1 | 1 | 13 | 192 | uv|U10459.1:6337-6662 | 79 | 258 | Strong | Strong | Suspect[1,2];Suspect[939,980]; | TRUE_BIOLOGICAL | 10639 | 1 | Gateway Entry vector pWY102, complete sequence | 18.26530612 |
TDe_comp108413_c3_seq3 | 1 | 1 | 216 | 460 | uv|AY568055.1:6692-7837 | 76 | 320 | Strong | Strong | Suspect[1,49];Suspect[169,215];Suspect[461,465];Suspect[1307,1311]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 18.22255414 |
CLCdnDe12_169897 | 1 | 1 | 350 | 526 | uv|AF234298.1:426-602 | 177 | 1 | Strong | Strong | Suspect[1,2];Suspect[939,980]; | TRUE_BIOLOGICAL | 460517 | 1 | Gateway Entry vector pWY102, complete sequence | 17.95918367 |
CLCdnDe12_169897 | 1 | 1 | 227 | 398 | uv|U56996.1:1-759 | 6 | 177 | Strong | Strong | Suspect[1,2];Suspect[939,980]; | TRUE_BIOLOGICAL | 6099 | 1 | Gateway Entry vector pWY102, complete sequence | 17.44897959 |
VdnDe3_6515 | 1 | 1 | 334 | 578 | uv|AY568055.1:6692-7837 | 76 | 320 | Strong | Strong | Suspect[287,333];Suspect[579,583]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 17.21947777 |
CLCdnDe11_33672 | 1 | 1 | 239 | 291 | uv|KF719004.1:2204-2946 | 113 | 61 | Strong | Strong | Suspect[292,309]; | TRUE_BIOLOGICAL | 3803 | 1 | S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit | 16.82847896 |
CLCdnDe12_96046 | 1 | 1 | 418 | 532 | uv|JN874480.1:6795-9434 | 55 | 175 | Strong | Strong | Suspect[533,542]; | TRUE_BIOLOGICAL | 4107 | 1 | Solanum pennellii chromosome ch07, complete genome | 16.28571429 |
VdnDe1_136816 | 1 | 1 | 180 | 216 | uv|L07041.1:1-670 | 645 | 609 | Strong | Strong | Suspect[217,223]; | TRUE_BIOLOGICAL | 10088 | 1 | Murine leukemia virus proviral DNA with long terminal repeat (LTR) (provirus in strain Balb/c) | 16.14349776 |
VdnDe2_13708 | 1 | 1 | 93 | 115 | uv|JF909482.1:3850-8059 | 2890 | 2868 | Weak | Weak | Suspect[116,137]; | TRUE_BIOLOGICAL | 3701 | 1 | 16.05839416 | |
CLCdnDe12_70016 | 1 | 1 | 93 | 142 | uv|Z22761.1:7913-8742-49 | 794 | 843 | Strong | Strong | Suspect[143,166];Suspect[291,306]; | TRUE_BIOLOGICAL | 10088 | 1 | Ecotropic murine leukemia virus, complete genome | 16.0130719 |
CLCdnDe5_70979 | 1 | 1 | 93 | 142 | uv|Z22761.1:7913-8742-49 | 794 | 843 | Strong | Strong | Suspect[143,166];Suspect[291,306]; | TRUE_BIOLOGICAL | 10088 | 1 | Ecotropic murine leukemia virus, complete genome | 16.0130719 |
CLCdnDe5_1920 | 1 | 1 | 23 | 58 | uv|KF719014.1:2590-2954 | 215 | 180 | Weak | Weak | Suspect[1,22]; | TRUE_BIOLOGICAL | 163743 | 1 | S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit | 15.98173516 |
CLCdnDe6_22722 | 1 | 1 | 120 | 169 | uv|KF719004.1:2204-2946 | 61 | 110 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | Tomato rbcS3C gene for ribulose 1,5-biphosp[hate carboxylase/oxygenase small subunit | 15.2173913 |
VdnDe2_165079 | 1 | 1 | 478 | 665 | uv|FJ160466.1:291-809 | 114 | 300 | Strong | Strong | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum receptor-like protein kinase HSL1 (LOC102594843), mRNA | 15.16626115 |
VdnDe2_68942 | 1 | 1 | 322 | 379 | uv|AY568055.1:9139-10024 | 253 | 196 | Strong | Strong | Suspect[1,32];Suspect[321,321]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 15.03957784 |
VdnDe1_334276 | 1 | 1 | 107 | 131 | uv|NGB00361.2:1-34 | 25 | 1 | Moderate | Moderate | Suspect[132,160]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus 26S protease regulatory subunit 7 (LOC101215578), mRNA | 15 |
VdnDe1_158620 | 1 | 1 | 20 | 41 | uv|KF718979.1:2206-6730 | 3630 | 3651 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 14.48275862 |
VdnDe3_218001 | 1 | 1 | 1 | 21 | uv|JX069761.1:1-102 | 87 | 67 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus 60S ribosomal protein L21-1 (LOC101208313), mRNA | 14.38848921 |
VdnDe1_252431 | 1 | 1 | 19 | 36 | uv|DQ317695.1:1340-3572 | 147 | 130 | Weak | Weak | Suspect[1,18]; | NO_DATA | 1 | 1 | 14.28571429 | |
VdnDe6_112095 | 1 | 1 | 364 | 425 | uv|JN874480.1:1-227 | 113 | 174 | Strong | Strong | Suspect[426,435]; | TRUE_BIOLOGICAL | 4953 | 1 | Cloning vector pCRm-luc2-PHLEO, complete sequence | 14.02298851 |
VdnDe1_136816 | 1 | 1 | 60 | 91 | uv|M28248.1:2832-3628 | 482 | 451 | Moderate | Strong | Suspect[217,223]; | TRUE_BIOLOGICAL | 10066 | 1 | Murine leukemia virus proviral DNA with long terminal repeat (LTR) (provirus in strain Balb/c) | 13.90134529 |
CLCdnDe12_30930 | 1 | 1 | 26 | 55 | uv|NGB00051.1:1428-2848 | 1289 | 1318 | Weak | Weak | Suspect[1,25]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102585618 (LOC102585618), ncRNA | 13.87559809 |
VdnDe2_31361 | 1 | 1 | 18 | 37 | uv|KC702212.1:1-1136 | 611 | 592 | Moderate | Moderate | Suspect[1,17]; | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum pennellii chromosome ch11, complete genome | 13.76811594 |
VdnDe1_302689 | 1 | 1 | 72 | 87 | uv|AF379854.1:3-2710 | 825 | 810 | Weak | Weak | Suspect[88,109]; | TRUE_BIOLOGICAL | 5820 | 1 | 13.76146789 | |
VdnDe1_332899 | 1 | 1 | 120 | 139 | uv|JX069761.1:1-102 | 67 | 86 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic-like (LOC101215687), transcript variant X2, mRNA | 13.66906475 |
VdnDe4_77386 | 1 | 1 | 1581 | 1837 | uv|U28417.1:1-944 | 853 | 597 | Strong | Strong | None | TRUE_BIOLOGICAL | 10639 | 1 | PREDICTED: Solanum tuberosum transcription factor MYB44-like (LOC102581745), mRNA | 13.66791244 |
VdnDe8_1064 | 1 | 1 | 82 | 97 | uv|KF719017.1:2210-3106 | 39 | 54 | Weak | Weak | Suspect[98,112]; | NO_DATA | 1 | 1 | 13.39285714 | |
VdnDe6_112209 | 1 | 1 | 361 | 420 | uv|AF327718.1:673-1273 | 542 | 483 | Strong | Strong | Suspect[421,441]; | TRUE_BIOLOGICAL | 11646 | 1 | Cloning vector pCPC52, complete sequence | 13.37868481 |
VdnDe1_320038 | 1 | 1 | 91 | 106 | uv|JQ927446.1:4885-6835-49 | 601 | 586 | Weak | Weak | Suspect[107,113]; | NO_DATA | 1 | 1 | 13.27433628 | |
VdnDe3_193392 | 1 | 1 | 211 | 251 | uv|KF719004.1:2204-2946 | 73 | 113 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds | 13.1147541 |
VdnDe2_254423 | 1 | 1 | 92 | 107 | uv|J02459.1:1-48502-49 | 31181 | 31196 | Weak | Weak | Suspect[108,115]; | TRUE_BIOLOGICAL | 10699 | 1 | 13.04347826 | |
VdnDe1_297722 | 1 | 1 | 1 | 16 | uv|JX310867.1:868-3760 | 2437 | 2452 | Weak | Weak | None | TRUE_BIOLOGICAL | 1224 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 12.93103448 |
VdnDe2_46552 | 1 | 1 | 2 | 17 | uv|AF379854.1:3-2710 | 787 | 802 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102598865 (LOC102598865), mRNA | 12.71186441 |
VdnDe2_226616 | 1 | 1 | 97 | 112 | uv|JX560397.1:83-5970 | 4418 | 4433 | Weak | Weak | Suspect[113,118]; | TRUE_BIOLOGICAL | 1236 | 1 | Solanum lycopersicum cultivar I-3 chromosome 5 | 12.71186441 |
VdnDe7_43376 | 1 | 1 | 214 | 254 | uv|KF719004.1:2204-2946 | 73 | 113 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds | 12.53918495 |
VdnDe5_63682 | 1 | 1 | 1114 | 1314 | uv|EU182593.1:176-1026 | 73 | 273 | Strong | Strong | None | TRUE_BIOLOGICAL | 460517 | 1 | PREDICTED: Solanum tuberosum transcription factor MYB44-like (LOC102581745), mRNA | 12.46882793 |
VdnDe1_123142 | 1 | 1 | 17 | 32 | uv|DQ883654.3:1-642 | 120 | 135 | Weak | Weak | Suspect[1,16]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 12.39669421 |
VdnDe1_271406 | 1 | 1 | 97 | 112 | uv|KC702198.1:1-1023 | 579 | 594 | Weak | Weak | Suspect[113,121]; | TRUE_BIOLOGICAL | 196118 | 1 | 12.39669421 | |
CLCdnDe4_56015 | 1 | 1 | 175 | 200 | uv|V00604.2:1-6407-49 | 6356 | 6380 | Moderate | Moderate | Suspect[201,203]; | TRUE_BIOLOGICAL | 10861 | 1 | 12.31527094 | |
VdnDe2_270574 | 1 | 1 | 101 | 116 | uv|KC702232.1:1-523 | 80 | 65 | Weak | Weak | Suspect[117,122]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum lycopersicum cultivar I-3 chromosome 11 | 12.29508197 |
CLCdnDe6_134076 | 1 | 1 | 205 | 260 | uv|KF719004.1:2204-2946 | 58 | 113 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | Solanum lycopersicum ribulose bisphosphate carboxylase small chain 1, chloroplastic (rbcS1), mRNA | 12.19512195 |
VdnDe1_53633 | 1 | 1 | 96 | 112 | uv|U67875.1:6835-8216 | 295 | 311 | Weak | Weak | Suspect[113,132]; | TRUE_BIOLOGICAL | 4895 | 1 | Solanum pennellii chromosome ch09, complete genome | 12.12121212 |
VdnDe1_259854 | 1 | 1 | 93 | 108 | uv|J02400.1:1-5243-49 | 2157 | 2142 | Weak | Weak | Suspect[109,124]; | TRUE_BIOLOGICAL | 151341 | 1 | 12.09677419 | |
VdnDe5_129118 | 1 | 1 | 2 | 17 | uv|Z46234.1:664-3443 | 2583 | 2568 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 4892 | 1 | PREDICTED: Solanum lycopersicum glutathione S-transferase zeta class-like (LOC101252525), transcript variant X1, mRNA | 12 |
VdnDe1_334433 | 1 | 1 | 30 | 52 | uv|NGB00380.1:1-26 | 25 | 3 | Weak | Weak | Suspect[1,29]; | TRUE_ARTIFICIAL | 81077 | 81077 | 11.95652174 | |
VdnDe2_238795 | 1 | 1 | 12 | 28 | uv|X70484.1:595-724 | 108 | 92 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum pennellii chromosome ch11, complete genome | 11.85185185 |
VdnDe1_282576 | 1 | 1 | 20 | 35 | uv|EF442786.1:5164-5252 | 53 | 68 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107060519 (LOC107060519), transcript variant X2, ncRNA | 11.81102362 |
VdnDe1_333682 | 1 | 1 | 94 | 109 | uv|KC702165.1:1-1023 | 793 | 808 | Weak | Weak | Suspect[110,127]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Cucumis sativus ATP-dependent zinc metalloprotease FTSH 2, chloroplastic (LOC101210163), mRNA | 11.81102362 |
VdnDe3_116232 | 1 | 1 | 126 | 143 | uv|Z46234.1:664-3443 | 2588 | 2571 | Weak | Weak | Suspect[144,144]; | TRUE_BIOLOGICAL | 4892 | 1 | Solanum lycopersicum cultivar I-3 chromosome 12 | 11.80555556 |
CLCdnDe12_70016 | 1 | 1 | 167 | 203 | uv|L07041.1:1-670 | 484 | 520 | Strong | Strong | Suspect[143,166];Suspect[291,306]; | TRUE_BIOLOGICAL | 10088 | 1 | Ecotropic murine leukemia virus, complete genome | 11.76470588 |
CLCdnDe5_70979 | 1 | 1 | 167 | 203 | uv|L07041.1:1-670 | 484 | 520 | Strong | Strong | Suspect[143,166];Suspect[291,306]; | TRUE_BIOLOGICAL | 10088 | 1 | Ecotropic murine leukemia virus, complete genome | 11.76470588 |
VdnDe1_248726 | 1 | 1 | 8 | 23 | uv|L19899.1:5053-5151 | 25 | 40 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 10294 | 1 | PREDICTED: Solanum tuberosum delta-amyrin synthase (LOC102591877), mRNA | 11.71875 |
VdnDe1_314589 | 1 | 1 | 111 | 126 | uv|X51450.1:2521-3852 | 383 | 368 | Weak | Weak | Suspect[127,128]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum 60S ribosomal protein L18-2 (LOC102604004), mRNA | 11.71875 |
VdnDe1_343934 | 1 | 1 | 1 | 16 | uv|U47120.2:791-908 | 53 | 68 | Weak | Weak | None | NO_DATA | 1 | 1 | Mallomonas pseudomatvienkoae strain Geumya101709 26S ribosomal RNA gene, partial sequence | 11.71875 |
VdnDe3_88427 | 1 | 1 | 11 | 27 | uv|V00604.2:1-6407-49 | 5022 | 5006 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 10861 | 1 | PREDICTED: Solanum tuberosum polygalacturonase non-catalytic subunit AroGP3-like (LOC102603032), mRNA | 11.67883212 |
VdnDe2_282194 | 1 | 1 | 119 | 135 | uv|AB013921.2:7008-7111 | 67 | 51 | Weak | Weak | Suspect[136,137]; | NO_DATA | 1 | 1 | Solanum lycopersicum chromosome ch11, complete genome | 11.67883212 |
VdnDe2_85733 | 1 | 1 | 24 | 39 | uv|U47122.2:1-1771 | 1151 | 1136 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 7049 | 1 | 11.62790698 | |
VdnDe3_214673 | 1 | 1 | 93 | 108 | uv|U02452.1:4310-5466 | 154 | 139 | Weak | Weak | Suspect[109,130]; | TRUE_BIOLOGICAL | 558016 | 1 | Solanum lycopersicum cultivar I-3 chromosome 12 | 11.53846154 |
VdnDe1_288064 | 1 | 1 | 7 | 24 | uv|U13843.1:1887-9923 | 3709 | 3726 | Weak | Weak | Suspect[1,6]; | TRUE_BIOLOGICAL | 325454 | 1 | Solanum pennellii chromosome ch06, complete genome | 11.48648649 |
VdnDe1_74102 | 1 | 1 | 30 | 52 | uv|NGB00380.1:1-26 | 25 | 3 | Weak | Weak | Suspect[1,29]; | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum tuberosum mRNA for TOM7 protein | 11.45833333 |
VdnDe2_270927 | 1 | 1 | 17 | 32 | uv|AF379854.1:3-2710 | 683 | 698 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 5820 | 1 | 11.45038168 | |
VdnDe4_164357 | 1 | 1 | 22 | 37 | uv|U02456.1:1-1930 | 510 | 525 | Weak | Weak | Suspect[1,21]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102601942 (LOC102601942), ncRNA | 11.36363636 |
VdnDe1_332257 | 1 | 1 | 4 | 19 | uv|FJ931533.1:7978-12753-49 | 4054 | 4069 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 7215 | 1 | PREDICTED: Melanaphis sacchari cold and drought-regulated protein CORA-like (LOC112603821), mRNA | 11.27819549 |
VdnDe2_256512 | 1 | 1 | 1 | 17 | uv|KC702183.1:1-1023 | 959 | 943 | Weak | Weak | None | TRUE_BIOLOGICAL | 196118 | 1 | 11.26760563 | |
VdnDe2_268572 | 1 | 1 | 25 | 40 | uv|M77169.1:820-5161 | 2168 | 2153 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 1485 | 1 | 11.19402985 | |
VdnDe2_289670 | 1 | 1 | 108 | 123 | uv|KM407512.1:886-4985 | 2604 | 2589 | Weak | Weak | Suspect[124,134]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 11.19402985 |
VdnDe3_152663 | 1 | 1 | 21 | 36 | uv|Z32692.1:5183-6220 | 620 | 605 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 10242 | 1 | PREDICTED: Solanum tuberosum calcineurin B-like protein 4 (LOC102598672), transcript variant X1, mRNA | 11.19402985 |
VdnDe1_158923 | 1 | 1 | 13 | 28 | uv|U09128.1:3334-10218 | 840 | 855 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 91347 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 11.19402985 |
VdnDe9_5209 | 1 | 1 | 126 | 142 | uv|KF718995.1:2216-3853 | 492 | 476 | Weak | Weak | Suspect[143,143]; | NO_DATA | 1 | 1 | 11.18881119 | |
VdnDe1_179811 | 1 | 1 | 144 | 165 | uv|JN874480.1:1050-2714 | 867 | 846 | Weak | Weak | Suspect[166,188]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102601701 (LOC102601701), transcript variant X4, mRNA | 11.17021277 |
CLCdnDe12_169897 | 1 | 1 | 88 | 197 | uv|AF234315.1:6350-6536 | 1 | 110 | Strong | Strong | Suspect[1,2];Suspect[939,980]; | TRUE_BIOLOGICAL | 10639 | 1 | Gateway Entry vector pWY102, complete sequence | 11.12244898 |
VdnDe1_56189 | 1 | 1 | 116 | 131 | uv|Z29589.1:3211-4486 | 1209 | 1194 | Weak | Weak | Suspect[132,135]; | TRUE_BIOLOGICAL | 4527 | 1 | Solanum pennellii chromosome ch12, complete genome | 11.11111111 |
VdnDe8_6455 | 1 | 1 | 96 | 111 | uv|HM640258.1:3073-3170 | 33 | 18 | Weak | Weak | Suspect[112,135]; | NO_DATA | 1 | 1 | 11.11111111 | |
VdnDe8_17210 | 1 | 1 | 24 | 39 | uv|AY529716.1:3879-4121 | 67 | 82 | Weak | Weak | Suspect[1,23]; | NO_DATA | 1 | 1 | 11.11111111 | |
VdnDe1_147426 | 1 | 1 | 4 | 19 | uv|U09128.1:2136-2290 | 131 | 146 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 4892 | 1 | Solanum lycopersicum cultivar I-3 chromosome 6 | 11.02941176 |
VdnDe3_145618 | 1 | 1 | 6 | 21 | uv|J02459.1:1-48502-49 | 23886 | 23901 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 10699 | 1 | 11.02941176 | |
VdnDe2_165076 | 1 | 1 | 334 | 438 | uv|AF234315.1:8525-8629 | 1 | 105 | Strong | Strong | None | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum receptor-like protein kinase HSL1 (LOC102594843), mRNA | 10.94736842 |
VdnDe2_146309 | 1 | 1 | 1009 | 1133 | uv|JX310866.1:1293-1483 | 191 | 67 | Strong | Strong | Suspect[86,91]; | NO_DATA | 1 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 10.94439541 |
VdnDe3_122292 | 1 | 1 | 1009 | 1133 | uv|JX310866.1:1293-1483 | 191 | 67 | Strong | Strong | Suspect[86,91]; | NO_DATA | 1 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 10.94439541 |
CLCdnDe10_61534 | 1 | 1 | 429 | 489 | uv|L07041.1:673-1123 | 64 | 124 | Weak | Strong | Suspect[143,166];Suspect[490,504]; | TRUE_BIOLOGICAL | 10088 | 1 | Murine leukemia virus isolate 59325428, complete genome | 10.86956522 |
VdnDe2_163082 | 1 | 1 | 112 | 127 | uv|KF853602.1:1019-2932 | 1770 | 1755 | Weak | Weak | Suspect[128,138]; | TRUE_BIOLOGICAL | 7711 | 1 | 10.86956522 | |
CLCdnDe12_143595 | 1 | 1 | 3 | 32 | uv|JX069762.1:9774-9902-49 | 175 | 146 | Strong | Strong | Suspect[1,2]; | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum pennellii chromosome ch08, complete genome | 10.82089552 |
CLCdnDe8_487 | 1 | 1 | 318 | 358 | uv|KF719004.1:2204-2946 | 73 | 113 | Strong | Strong | Suspect[359,370]; | TRUE_BIOLOGICAL | 3803 | 1 | Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds | 10.81081081 |
CLCdnDe8_363 | 1 | 1 | 385 | 437 | uv|KF719004.1:2204-2946 | 61 | 113 | Strong | Strong | Suspect[438,483]; | TRUE_BIOLOGICAL | 3803 | 1 | PREDICTED: Solanum tuberosum ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC102601229), mRNA | 10.76604555 |
VdnDe2_262119 | 1 | 1 | 22 | 38 | uv|EU186085.1:9196-9407-14 | 1 | 17 | Weak | Weak | Suspect[1,21]; | NO_DATA | 1 | 1 | TPA_inf: Solanum tuberosum lycopene epsilon cyclase (LCYe) gene, LCYe-4 allele, complete cds | 10.73825503 |
VdnDe1_341958 | 1 | 1 | 2 | 17 | uv|J02400.1:1-5243-49 | 2142 | 2157 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 151341 | 1 | Solanum tuberosum chromosome 5 clone PGEC13, complete sequence | 10.71428571 |
CLCdnDe10_61534 | 1 | 1 | 268 | 327 | uv|M18804.1:1-214 | 35 | 94 | Weak | Strong | Suspect[143,166];Suspect[490,504]; | TRUE_BIOLOGICAL | 10088 | 1 | Murine leukemia virus isolate 59325428, complete genome | 10.6884058 |
VdnDe4_77386 | 1 | 1 | 291 | 491 | uv|EU182593.1:176-1026 | 273 | 73 | Strong | Strong | None | TRUE_BIOLOGICAL | 460517 | 1 | PREDICTED: Solanum tuberosum transcription factor MYB44-like (LOC102581745), mRNA | 10.67805659 |
VdnDe1_14099 | 1 | 1 | 113 | 129 | uv|U89961.1:1-4240 | 3722 | 3706 | Weak | Weak | Suspect[130,150]; | TRUE_BIOLOGICAL | 4930 | 1 | 10.66666667 | |
VdnDe2_107182 | 1 | 1 | 117 | 132 | uv|KY031735.1:1-4680 | 735 | 750 | Weak | Weak | Suspect[133,141]; | TRUE_BIOLOGICAL | 82115 | 1 | Solanum pennellii chromosome ch03, complete genome | 10.63829787 |
VdnDe1_183443 | 1 | 1 | 23 | 38 | uv|FJ931533.1:7978-12753-49 | 3996 | 4011 | Weak | Weak | Suspect[1,22]; | TRUE_BIOLOGICAL | 7215 | 1 | Solanum pennellii chromosome ch12, complete genome | 10.63829787 |
VdnDe1_328156 | 1 | 1 | 139 | 156 | uv|GU593054.1:1-1305 | 1221 | 1204 | Weak | Weak | Suspect[157,160]; | TRUE_BIOLOGICAL | 1279 | 1 | 10.625 | |
VdnDe2_284216 | 1 | 1 | 24 | 40 | uv|M16192.1:1-2517-49 | 1630 | 1646 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 1279 | 1 | 10.59602649 | |
VdnDe1_311799 | 1 | 1 | 23 | 38 | uv|KF718979.1:2206-6730 | 4107 | 4122 | Weak | Weak | Suspect[1,22]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum lycopersicum cultivar I-3 chromosome 5 | 10.56338028 |
VdnDe1_342876 | 1 | 1 | 111 | 126 | uv|JN900237.1:1151-3072-49 | 1188 | 1173 | Weak | Weak | Suspect[127,142]; | NO_DATA | 1 | 1 | 10.56338028 | |
VdnDe2_165076 | 1 | 1 | 137 | 237 | uv|EU729726.1:155-394 | 140 | 240 | Strong | Strong | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum receptor-like protein kinase HSL1 (LOC102594843), mRNA | 10.52631579 |
VdnDe4_81233 | 1 | 1 | 1 | 125 | uv|JX310866.1:1293-1483 | 67 | 191 | Strong | Strong | Suspect[1069,1075]; | NO_DATA | 1 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 10.51738762 |
CLCdnDe14_108484 | 1 | 1 | 12 | 33 | uv|M77169.1:820-5161 | 2571 | 2550 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum lycopersicum uncharacterized LOC112942199 (LOC112942199), ncRNA | 10.5 |
VdnDe1_220874 | 1 | 1 | 113 | 128 | uv|JX560397.1:83-5970 | 3558 | 3573 | Weak | Weak | Suspect[129,143]; | TRUE_BIOLOGICAL | 1236 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102601009 (LOC102601009), transcript variant X2, ncRNA | 10.48951049 |
CLCdnDe6_153627 | 1 | 1 | 3 | 31 | uv|JX069762.1:9774-9902-49 | 175 | 146 | Moderate | Moderate | Suspect[1,2]; | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum pennellii chromosome ch08, complete genome | 10.48689139 |
VdnDe3_120602 | 1 | 1 | 11 | 27 | uv|NGB01020.1:535-633 | 24 | 40 | Weak | Weak | Suspect[1,10]; | NO_DATA | 1 | 1 | 10.45751634 | |
VdnDe1_39052 | 1 | 1 | 23 | 38 | uv|KC702193.1:1-1136 | 958 | 943 | Weak | Weak | Suspect[1,22]; | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 1 | 10.41666667 |
VdnDe1_42615 | 1 | 1 | 118 | 133 | uv|J02482.1:1-5386-49 | 1610 | 1625 | Weak | Weak | Suspect[134,144]; | TRUE_BIOLOGICAL | 10842 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 10.41666667 |
VdnDe1_262063 | 1 | 1 | 118 | 133 | uv|AY568055.1:6692-7837 | 410 | 425 | Weak | Weak | Suspect[134,144]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 5 | 10.41666667 |
CLCdnDe11_158087 | 1 | 1 | 181 | 202 | uv|JX069761.1:1-102 | 67 | 88 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (LOC101216389), mRNA | 10.3960396 |
CLCdnDe11_107896 | 1 | 1 | 11 | 32 | uv|U55760.1:1-2749 | 1331 | 1310 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 558016 | 1 | Solanum tuberosum, complete sequence | 10.3960396 |
VdnDe1_157250 | 1 | 1 | 133 | 249 | uv|X65310.2:2263-2408 | 1 | 117 | Strong | Strong | Suspect[86,91];Suspect[1023,1061]; | TRUE_BIOLOGICAL | 620 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 10.39426523 |
VdnDe4_77386 | 1 | 1 | 1679 | 1873 | uv|X05868.1:1-340 | 340 | 145 | Strong | Strong | None | TRUE_BIOLOGICAL | 10639 | 1 | PREDICTED: Solanum tuberosum transcription factor MYB44-like (LOC102581745), mRNA | 10.3577149 |
VdnDe9_524 | 1 | 1 | 11 | 26 | uv|JX025644.1:4719-4956 | 78 | 93 | Weak | Weak | Suspect[1,10]; | NO_DATA | 1 | 1 | 10.34482759 | |
CLCdnDe3_104854 | 1 | 1 | 183 | 204 | uv|DQ666273.1:28-245 | 117 | 138 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 4930 | 1 | 10.29411765 | |
VdnDe9_401 | 1 | 1 | 23 | 38 | uv|NGB00022.1:2415-2514 | 72 | 57 | Weak | Weak | Suspect[1,22]; | NO_DATA | 1 | 1 | 10.2739726 | |
VdnDe2_146309 | 1 | 1 | 133 | 249 | uv|X65310.2:2263-2408 | 1 | 117 | Strong | Strong | Suspect[86,91]; | TRUE_BIOLOGICAL | 620 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 10.23830538 |
VdnDe3_122292 | 1 | 1 | 133 | 249 | uv|X65310.2:2263-2408 | 1 | 117 | Strong | Strong | Suspect[86,91]; | TRUE_BIOLOGICAL | 620 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 10.23830538 |
CLCdnDe12_161316 | 1 | 1 | 223 | 250 | uv|KF718979.1:2206-6730 | 343 | 316 | Moderate | Moderate | Suspect[251,264]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum tuberosum chromosome 11 clone RH021O18, complete sequence | 10.22727273 |
CLCdnDe12_55313 | 1 | 1 | 180 | 202 | uv|Z22671.1:1221-1388 | 41 | 19 | Weak | Weak | Suspect[203,217]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch02, complete genome | 10.13824885 |
CLCdnDe12_119242 | 1 | 1 | 16 | 38 | uv|Z22671.1:1221-1388 | 19 | 41 | Weak | Weak | Suspect[1,15]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch02, complete genome | 10.13824885 |
VdnDe1_263224 | 1 | 1 | 12 | 27 | uv|KF718979.1:2206-6730 | 1814 | 1799 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum tuberosum clone BAC BC58I22 sequence | 10.13513514 |
VdnDe3_33318 | 1 | 1 | 109 | 124 | uv|KM407512.1:886-4985 | 3236 | 3251 | Weak | Weak | Suspect[125,148]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 7 | 10.13513514 |
VdnDe1_287181 | 1 | 1 | 16 | 31 | uv|U13843.1:1887-9923 | 5954 | 5969 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 325454 | 1 | Solanum pennellii chromosome ch03, complete genome | 10.06711409 |
VdnDe2_34420 | 1 | 1 | 136 | 153 | uv|AF129072.1:907-3477 | 1675 | 1692 | Weak | Weak | Suspect[154,169]; | NO_DATA | 1 | 1 | 10.0591716 | |
VdnDe1_32623 | 1 | 1 | 15 | 33 | uv|X53127.1:443-904 | 330 | 312 | Moderate | Moderate | Suspect[1,14]; | TRUE_BIOLOGICAL | 6237 | 1 | Solanum lycopersicum cultivar I-3 chromosome 11 | 10.05586592 |
VdnDe1_334491 | 1 | 1 | 170 | 189 | uv|JX069761.1:1-102 | 67 | 86 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus uncharacterized LOC101210529 (LOC101210529), ncRNA | 10.05291005 |
VdnDe2_120379 | 1 | 1 | 131 | 146 | uv|KM407506.1:2354-4632 | 1059 | 1044 | Weak | Weak | Suspect[147,150]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 10 |
VdnDe3_63789 | 1 | 1 | 135 | 150 | uv|X51450.1:1-1204 | 1045 | 1060 | Weak | Weak | None | TRUE_BIOLOGICAL | 1279 | 1 | Solanum pennellii chromosome ch12, complete genome | 10 |
CLCdnDe8_362 | 1 | 1 | 351 | 391 | uv|KF719004.1:2204-2946 | 73 | 113 | Strong | Strong | Suspect[1,17];Suspect[392,402]; | TRUE_BIOLOGICAL | 3803 | 1 | Solanum tuberosum ribulose bisphosphate carboxylase small chain C, chloroplastic-like (RBCS-C), mRNA<>Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds | 9.950248756 |
CLCdnDe9_114305 | 1 | 1 | 114 | 129 | uv|M77169.1:820-5161 | 1450 | 1465 | Weak | Weak | Suspect[130,151]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum pennellii chromosome ch09, complete genome | 9.933774834 |
VdnDe8_13249 | 1 | 1 | 122 | 137 | uv|NGB00029.1:2153-2699 | 448 | 463 | Weak | Weak | Suspect[138,151]; | NO_DATA | 1 | 1 | 9.933774834 | |
CLCdnDe14_134310 | 1 | 1 | 433 | 488 | uv|KF719004.1:2204-2946 | 58 | 113 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | Solanum lycopersicum ribulose bisphosphate carboxylase small chain 1, chloroplastic (rbcS1), mRNA | 9.90990991 |
CLCdnDe7_136545 | 1 | 1 | 433 | 488 | uv|KF719004.1:2204-2946 | 58 | 113 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 3803 | 1 | Solanum lycopersicum ribulose bisphosphate carboxylase small chain 1, chloroplastic (rbcS1), mRNA | 9.90990991 |
VdnDe3_197840 | 1 | 1 | 146 | 162 | uv|JN900237.1:1151-3072-49 | 919 | 903 | Weak | Weak | None | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum premnaspirodiene oxygenase-like (LOC102601724), mRNA | 9.87654321 |
VdnDe4_81233 | 1 | 1 | 885 | 1001 | uv|X65310.2:2263-2408 | 117 | 1 | Strong | Strong | Suspect[1069,1075]; | TRUE_BIOLOGICAL | 620 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 9.83884648 |
VdnDe2_144195 | 1 | 1 | 141 | 158 | uv|L08878.1:186-419 | 191 | 174 | Weak | Weak | Suspect[1,15];Suspect[159,173]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch03, complete genome | 9.826589595 |
VdnDe1_153616 | 1 | 1 | 132 | 148 | uv|U14626.1:298-373 | 35 | 51 | Weak | Weak | Suspect[149,163]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102594383 (LOC102594383), ncRNA | 9.81595092 |
VdnDe1_134272 | 1 | 1 | 21 | 38 | uv|KF680545.1:1-2837 | 537 | 554 | Weak | Weak | Suspect[1,20]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch12, complete genome | 9.770114943 |
CLCdnDe6_157364 | 1 | 1 | 182 | 203 | uv|KF718979.1:2206-6730 | 187 | 166 | Weak | Weak | Suspect[204,215]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch04, complete genome | 9.76744186 |
VdnDe4_81233 | 1 | 1 | 953 | 1068 | uv|J01749.1:1-4361-49 | 4285 | 4170 | Strong | Strong | Suspect[1069,1075]; | TRUE_BIOLOGICAL | 561 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 9.754028838 |
VdnDe1_309136 | 1 | 1 | 128 | 144 | uv|J02459.1:1-48502-49 | 1258 | 1274 | Weak | Weak | Suspect[1,3];Suspect[145,165]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum lycopersicum cultivar I-3 chromosome 9 | 9.696969697 |
CLCdnDe6_30884 | 1 | 1 | 92 | 114 | uv|FJ710109.1:6726-9221 | 2090 | 2068 | Weak | Weak | None | TRUE_BIOLOGICAL | 10375 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102584526 (LOC102584526), transcript variant X1, ncRNA | 9.691629956 |
VdnDe1_278901 | 1 | 1 | 120 | 135 | uv|U02436.1:3152-4436 | 1094 | 1079 | Weak | Weak | Suspect[136,155]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum pennellii chromosome ch09, complete genome | 9.677419355 |
CLCdnDe13_165129 | 1 | 1 | 20 | 41 | uv|DQ883646.3:1-493 | 244 | 265 | Weak | Weak | Suspect[1,19]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 1 mitochondrion, complete sequence | 9.633027523 |
VdnDe1_186150 | 1 | 1 | 135 | 151 | uv|JN381160.1:2018-4126 | 1181 | 1197 | Weak | Weak | Suspect[152,167]; | NO_DATA | 1 | 1 | 9.580838323 | |
CLCdnDe13_68220 | 1 | 1 | 16 | 36 | uv|U14124.1:1-466 | 172 | 152 | Moderate | Moderate | Suspect[1,15]; | TRUE_BIOLOGICAL | 4892 | 1 | PREDICTED: Solanum tuberosum 65-kDa microtubule-associated protein 6 (LOC102598747), mRNA | 9.56937799 |
VdnDe2_195113 | 1 | 1 | 127 | 142 | uv|JX560397.1:83-5970 | 3558 | 3573 | Weak | Weak | Suspect[143,157]; | TRUE_BIOLOGICAL | 1236 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102601009 (LOC102601009), transcript variant X2, ncRNA | 9.554140127 |
VdnDe1_151797 | 1 | 1 | 120 | 135 | uv|JN381160.1:2018-4126 | 1522 | 1507 | Weak | Weak | Suspect[136,157]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum chaperone protein dnaJ 49-like (LOC102583358), transcript variant X2, mRNA | 9.554140127 |
VdnDe3_213380 | 1 | 1 | 2 | 17 | uv|KC614689.1:2135-2262 | 16 | 1 | Weak | Weak | Suspect[1,1]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum stem-specific protein TSJT1 (LOC102595083), mRNA | 9.554140127 |
VdnDe4_131134 | 1 | 1 | 146 | 163 | uv|X70481.1:3564-4492 | 314 | 331 | Weak | Weak | Suspect[165,178]; | TRUE_BIOLOGICAL | 4930 | 1 | 9.550561798 | |
VdnDe3_208596 | 1 | 1 | 150 | 166 | uv|KF719004.1:2204-2946 | 113 | 97 | Weak | Weak | Suspect[167,168]; | TRUE_BIOLOGICAL | 3803 | 1 | S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit | 9.523809524 |
VdnDe1_130431 | 1 | 1 | 137 | 152 | uv|AY962893.1:8266-9065 | 232 | 217 | Weak | Weak | Suspect[153,158]; | TRUE_BIOLOGICAL | 29487 | 1 | PREDICTED: Solanum lycopersicum cysteine protease ATG4 (LOC101249673), transcript variant X1, mRNA | 9.493670886 |
VdnDe2_244323 | 1 | 1 | 2 | 17 | uv|JN874481.1:57-2095 | 568 | 583 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 3705 | 1 | Solanum lycopersicum cultivar I-3 chromosome 11 | 9.493670886 |
CLCdnDe10_100366 | 1 | 1 | 17 | 40 | uv|X51450.1:2521-3852 | 559 | 536 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 1279 | 1 | 9.465020576 | |
CLCdnDe11_157861 | 1 | 1 | 201 | 222 | uv|JX069761.1:1-102 | 67 | 88 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus 60S ribosomal protein L21-1 (LOC101208313), mRNA | 9.459459459 |
VdnDe9_400 | 1 | 1 | 13 | 34 | uv|HM162842.2:1904-2262 | 199 | 220 | Weak | Moderate | Suspect[1,12]; | NO_DATA | 1 | 1 | 9.417040359 | |
CLCdnDe11_132064 | 1 | 1 | 1 | 22 | uv|AF379854.1:3-2710 | 666 | 687 | Weak | Weak | None | TRUE_BIOLOGICAL | 5820 | 1 | Solanum lycopersicum cultivar I-3 chromosome 2 | 9.417040359 |
CLCdnDe5_149171 | 1 | 1 | 1 | 22 | uv|AF379854.1:3-2710 | 666 | 687 | Weak | Weak | None | TRUE_BIOLOGICAL | 5820 | 1 | Solanum lycopersicum cultivar I-3 chromosome 2 | 9.417040359 |
CLCdnDe4_135280 | 1 | 1 | 2 | 23 | uv|AF379854.1:3-2710 | 666 | 687 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 5820 | 1 | Solanum lycopersicum cultivar I-3 chromosome 2 | 9.375 |
VdnDe2_293811 | 1 | 1 | 8 | 23 | uv|L09145.1:1928-2134 | 60 | 45 | Weak | Weak | Suspect[1,7]; | NO_DATA | 1 | 1 | PREDICTED: Solanum pennellii replication factor C subunit 2 (LOC107003057), mRNA | 9.375 |