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| CLCdnDe4_140831 | 1 | 1 | 25 | 40 | uv|X51450.1:2521-3852 | 403 | 388 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum em protein H5 (LOC102580440), mRNA | 3.579952267 |
| CLCdnDe6_38106 | 1 | 1 | 20 | 35 | uv|M77169.1:820-5161 | 3241 | 3226 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum tuberosum zeaxanthin epoxidase (ZEP) gene, ZEP-2 allele, complete cds | 3.579952267 |
| VdnDe6_105664 | 1 | 1 | 22 | 37 | uv|KC702203.1:1-1124 | 993 | 1008 | Weak | Weak | Suspect[1,21]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum regulatory-associated protein of TOR 1-like (LOC107057742), transcript variant X5, mRNA | 3.579952267 |
| TDe_comp104633_c0_seq1 | 1 | 1 | 418 | 434 | uv|AF310136.1:497-2034 | 1233 | 1217 | Weak | Weak | Suspect[435,447]; | TRUE_BIOLOGICAL | 91347 | 1 | Solanum lycopersicum chromosome ch05, complete genome | 3.579418345 |
| VdnDe1_239846 | 1 | 1 | 4 | 20 | uv|EF456735.1:7106-7196 | 61 | 77 | Weak | Weak | Suspect[1,3]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum 50S ribosomal protein L18 (LOC102598083), transcript variant X1, mRNA | 3.579418345 |
| CLCdnDe1_1187 | 1 | 1 | 5 | 21 | uv|J02459.1:1-48502-49 | 20187 | 20203 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch03, complete genome | 3.579418345 |
| TDe_comp100955_c0_seq1 | 1 | 1 | 1 | 17 | uv|JX069762.1:9774-9902-49 | 98 | 114 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum uncharacterized LOC107061097 (LOC107061097), transcript variant X2, ncRNA | 3.579418345 |
| CLCdnDe7_139257 | 1 | 1 | 485 | 503 | uv|L08860.1:1858-2910-49 | 376 | 358 | Moderate | Moderate | None | TRUE_BIOLOGICAL | 1279 | 1 | Solanum pennellii chromosome ch08, complete genome | 3.578528827 |
| CLCdnDe9_14378 | 1 | 1 | 6 | 27 | uv|JX069761.1:1-102 | 88 | 67 | Moderate | Moderate | Suspect[1,5]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum prostamide/prostaglandin F synthase (LOC102585914), mRNA | 3.577512777 |
| CLCdnDe11_157814 | 1 | 1 | 672 | 697 | uv|NGB00737.1:1-47 | 26 | 1 | Strong | Strong | Suspect[699,699]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus chromoplast-specific carotenoid-associated protein, chromoplast-like (CHRC), mRNA | 3.576537911 |
| CLCdnDe11_89286 | 1 | 1 | 24 | 42 | uv|J02459.1:1-48502-49 | 45918 | 45936 | Moderate | Moderate | Suspect[1,23]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch09, complete genome | 3.571428571 |
| CLCdnDe2_66634 | 1 | 1 | 20 | 36 | uv|JF909482.1:3850-8059 | 3369 | 3353 | Weak | Weak | Suspect[1,19];Suspect[426,448]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum probable protein phosphatase 2C 51 (LOC102601437), transcript variant X4, mRNA | 3.571428571 |
| VdnDe7_3608 | 1 | 1 | 422 | 438 | uv|AF327718.1:673-1273 | 411 | 395 | Weak | Weak | Suspect[439,448]; | TRUE_BIOLOGICAL | 407 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102598753 (LOC102598753), transcript variant X1, mRNA | 3.571428571 |
| TDe_comp83898_c1_seq1 | 1 | 1 | 1 | 16 | uv|JN874480.1:1050-2714 | 497 | 512 | Weak | Weak | None | TRUE_BIOLOGICAL | 3701 | 1 | Solanum bulbocastanum BAC 27I18, complete sequence | 3.571428571 |
| VdnDe8_4307 | 1 | 1 | 403 | 418 | uv|U47122.2:1-1771 | 853 | 868 | Weak | Weak | Suspect[419,420]; | TRUE_BIOLOGICAL | 7049 | 1 | 3.571428571 | |
| CLCdnDe14_19371 | 1 | 1 | 13 | 28 | uv|NGB00587.1:1-3232 | 2572 | 2587 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum methylcrotonoyl-CoA carboxylase beta chain, mitochondrial (LOC102589983), mRNA | 3.571428571 |
| CLCdnDe14_27455 | 1 | 1 | 9 | 24 | uv|KF718979.1:2206-6730 | 403 | 388 | Weak | Weak | Suspect[1,8]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum tuberosum clone StDT79 dehydration-responsive protein RD22 mRNA, partial cds | 3.571428571 |
| CLCdnDe4_79268 | 1 | 1 | 18 | 33 | uv|DQ092493.1:5726-5822 | 56 | 41 | Weak | Weak | Suspect[1,17]; | TRUE_BIOLOGICAL | 91347 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102600291 (LOC102600291), mRNA | 3.571428571 |
| VdnDe1_201993 | 1 | 1 | 6 | 21 | uv|JX025643.1:1-2941 | 325 | 310 | Weak | Weak | Suspect[1,5]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 11 | 3.571428571 |
| VdnDe4_132703 | 1 | 1 | 403 | 418 | uv|U64448.1:1727-2734 | 338 | 323 | Weak | Weak | Suspect[419,420]; | TRUE_BIOLOGICAL | 10358 | 1 | PREDICTED: Solanum tuberosum probable amino-acid acetyltransferase NAGS1, chloroplastic (LOC102598178), transcript variant X1, mRNA | 3.571428571 |
| CLCdnDe2_1583 | 1 | 1 | 419 | 435 | uv|U09476.1:1-864 | 562 | 546 | Weak | Weak | Suspect[436,449]; | TRUE_BIOLOGICAL | 581 | 1 | PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102582531), transcript variant X14, mRNA | 3.563474388 |
| VdnDe2_202439 | 1 | 1 | 25 | 41 | uv|X70276.1:4179-4959 | 415 | 399 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 4930 | 1 | Hyoscyamus niger mitochondrion, complete genome | 3.563474388 |
| CLCdnDe10_25495 | 1 | 1 | 19 | 35 | uv|KC702180.1:1-1130 | 87 | 103 | Weak | Weak | Suspect[1,18]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum tRNA (guanine(37)-N1)-methyltransferase 1 (LOC102585129), transcript variant X1, mRNA | 3.563474388 |
| CLCdnDe6_76093 | 1 | 1 | 400 | 415 | uv|EU048870.1:2395-2542 | 31 | 16 | Weak | Weak | Suspect[416,421]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 12 | 3.562945368 |
| CLCdnDe6_134811 | 1 | 1 | 13 | 28 | uv|KY031735.1:1-4680 | 1807 | 1822 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 82115 | 1 | PREDICTED: Solanum lycopersicum F-box/FBD/LRR-repeat protein At4g26340-like (LOC101263338), transcript variant X2, mRNA | 3.562945368 |
| CLCdnDe12_47594 | 1 | 1 | 25 | 40 | uv|KC702202.1:1-1020 | 518 | 503 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like (LOC102583050), mRNA | 3.562945368 |
| CLCdnDe13_155645 | 1 | 1 | 16 | 31 | uv|FM991889.1:857-1060 | 157 | 142 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 10861 | 1 | PREDICTED: Solanum tuberosum agglutinin alpha chain-like (LOC107057759), transcript variant X2, mRNA | 3.562945368 |
| CLCdnDe2_10763 | 1 | 1 | 386 | 401 | uv|KF719005.1:2205-5132 | 276 | 291 | Weak | Weak | Suspect[402,421]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102578669 (LOC102578669), mRNA | 3.562945368 |
| CLCdnDe3_121222 | 1 | 1 | 404 | 419 | uv|GU593054.1:1-1305 | 1192 | 1207 | Weak | Weak | Suspect[420,421]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum lycopersicum cultivar I-3 chromosome 8 | 3.562945368 |
| CLCdnDe5_134687 | 1 | 1 | 392 | 407 | uv|KF718989.1:2199-3181 | 266 | 251 | Weak | Weak | Suspect[408,421]; | TRUE_BIOLOGICAL | 3700 | 1 | Solanum tuberosum strain Diploid genotype RH89-039-16 chromosome 9 clone RH023B19, complete sequence | 3.562945368 |
| TDe_comp104455_c0_seq6 | 1 | 1 | 25 | 40 | uv|JQ394799.1:1-1559 | 1165 | 1180 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 286 | 1 | PREDICTED: Solanum tuberosum inorganic pyrophosphatase 1-like (LOC102584868), transcript variant X2, mRNA | 3.562945368 |
| VdnDe2_168258 | 1 | 1 | 17 | 32 | uv|J02400.1:1-5243-49 | 2922 | 2907 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 151341 | 1 | PREDICTED: Solanum tuberosum probable mediator of RNA polymerase II transcription subunit 26c (LOC102595451), mRNA | 3.562945368 |
| VdnDe3_136615 | 1 | 1 | 6 | 21 | uv|KF718996.1:2914-4532 | 533 | 548 | Weak | Weak | Suspect[1,5]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102594232 (LOC102594232), ncRNA | 3.562945368 |
| VdnDe2_260060 | 1 | 1 | 15 | 30 | uv|AF379854.1:4263-5841 | 1169 | 1184 | Weak | Weak | Suspect[1,14]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum auxin-induced protein 15A-like (LOC102590858), mRNA | 3.55450237 |
| CLCdnDe11_78058 | 1 | 1 | 392 | 407 | uv|Z46234.1:7923-9273 | 92 | 107 | Weak | Weak | Suspect[408,422]; | TRUE_BIOLOGICAL | 460517 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 3.55450237 |
| CLCdnDe12_130036 | 1 | 1 | 398 | 413 | uv|AF379854.1:4263-5841 | 914 | 899 | Weak | Weak | Suspect[414,422]; | TRUE_BIOLOGICAL | 5820 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 3.55450237 |
| CLCdnDe13_12317 | 1 | 1 | 386 | 401 | uv|FJ160466.1:1899-7260-49 | 3511 | 3496 | Weak | Weak | Suspect[402,422]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum 50S ribosomal protein HLP, mitochondrial-like (LOC102590369), transcript variant X5, mRNA | 3.55450237 |
| CLCdnDe14_99527 | 1 | 1 | 386 | 401 | uv|J02459.1:1-48502-49 | 28360 | 28375 | Weak | Weak | Suspect[402,422]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum lignin-forming anionic peroxidase-like (LOC102599828), mRNA | 3.55450237 |
| CLCdnDe4_80565 | 1 | 1 | 390 | 405 | uv|AF025844.2:1-1301 | 795 | 780 | Weak | Weak | Suspect[406,422]; | TRUE_BIOLOGICAL | 6134 | 1 | PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g34400-like (LOC102599155), mRNA | 3.55450237 |
| CLCdnDe6_38349 | 1 | 1 | 15 | 30 | uv|V00604.2:1-6407-49 | 2775 | 2760 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 10861 | 1 | PREDICTED: Solanum pennellii fatty-acid-binding protein 3, chloroplastic (LOC107023949), mRNA | 3.55450237 |
| CLCdnDe9_2943 | 1 | 1 | 400 | 415 | uv|JF909481.1:3855-5640 | 1104 | 1089 | Weak | Weak | Suspect[416,422]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102585854 (LOC102585854), mRNA | 3.55450237 |
| VdnDe1_213463 | 1 | 1 | 461 | 478 | uv|JF909481.1:3855-5640 | 1103 | 1086 | Weak | Weak | Suspect[479,479]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch06, complete genome | 3.549060543 |
| VdnDe1_127459 | 1 | 1 | 7 | 29 | uv|KC702199.1:1-273 | 227 | 249 | Weak | Weak | Suspect[1,6]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum protein root UVB sensitive 2, chloroplastic (LOC102605554), transcript variant X1, mRNA | 3.548387097 |
| CLCdnDe9_7259 | 1 | 1 | 7 | 23 | uv|FJ931533.1:7978-12753-49 | 1000 | 984 | Weak | Weak | Suspect[1,6]; | TRUE_BIOLOGICAL | 7215 | 1 | Solanum pennellii chromosome ch10, complete genome | 3.54767184 |
| VdnDe4_2951 | 1 | 1 | 5 | 21 | uv|KF718979.1:2206-6730 | 4324 | 4308 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 3701 | 1 | 3.54767184 | |
| VdnDe1_219679 | 1 | 1 | 1 | 21 | uv|JX069761.1:1-102 | 87 | 67 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum arabinosyltransferase RRA3-like (LOC102582025), mRNA | 3.546099291 |
| CLCdnDe12_97999 | 1 | 1 | 23 | 38 | uv|NGB00587.1:1-3232 | 361 | 346 | Weak | Weak | Suspect[1,22]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch12, complete genome | 3.546099291 |
| CLCdnDe14_134290 | 1 | 1 | 408 | 423 | uv|M77169.1:820-5161 | 636 | 651 | Weak | Weak | None | TRUE_BIOLOGICAL | 1485 | 1 | 3.546099291 | |
| CLCdnDe10_37314 | 1 | 1 | 25 | 40 | uv|M16217.1:1-2529 | 933 | 948 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 1279 | 1 | 3.546099291 | |
| CLCdnDe14_134286 | 1 | 1 | 392 | 407 | uv|U89960.1:4738-7717 | 2062 | 2077 | Weak | Weak | Suspect[408,423]; | TRUE_BIOLOGICAL | 4892 | 1 | Solanum tuberosum chromosome 1 mitochondrion, complete sequence | 3.546099291 |
| CLCdnDe2_98006 | 1 | 1 | 395 | 410 | uv|JF909481.1:3855-5640 | 550 | 565 | Weak | Weak | Suspect[411,423]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 9 | 3.546099291 |
| CLCdnDe5_100104 | 1 | 1 | 23 | 38 | uv|NGB00587.1:1-3232 | 361 | 346 | Weak | Weak | Suspect[1,22]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch12, complete genome | 3.546099291 |
| CLCdnDe7_91853 | 1 | 1 | 407 | 422 | uv|FJ931533.1:7978-12753-49 | 564 | 579 | Weak | Weak | Suspect[423,423]; | TRUE_BIOLOGICAL | 7215 | 1 | Solanum pennellii chromosome ch09, complete genome | 3.546099291 |
| TDe_comp6903_c0_seq1 | 1 | 1 | 8 | 23 | uv|JN874480.1:11708-20103 | 1817 | 1832 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 357 | 1 | Solanum tuberosum chromosome 1 mitochondrion, complete sequence | 3.546099291 |
| VdnDe2_174311 | 1 | 1 | 1 | 16 | uv|DQ493885.2:2427-2634 | 46 | 61 | Weak | Weak | None | TRUE_BIOLOGICAL | 6099 | 1 | PREDICTED: Solanum lycopersicum F-box/kelch-repeat protein SKIP30 (LOC101260373), transcript variant X3, mRNA | 3.546099291 |
| VdnDe2_174311 | 1 | 1 | 8 | 23 | uv|AF379854.1:3-2710 | 1452 | 1437 | Weak | Weak | None | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum lycopersicum F-box/kelch-repeat protein SKIP30 (LOC101260373), transcript variant X3, mRNA | 3.546099291 |
| VdnDe3_93844 | 1 | 1 | 395 | 410 | uv|X06779.1:1-4734 | 3975 | 3990 | Weak | Weak | Suspect[411,423]; | TRUE_BIOLOGICAL | 7215 | 1 | PREDICTED: Nicotiana sylvestris uncharacterized LOC104242672 (LOC104242672), ncRNA | 3.546099291 |
| VdnDe1_153376 | 1 | 1 | 490 | 508 | uv|NGB00361.2:1-34 | 23 | 5 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum uncharacterized protein At2g37660, chloroplastic (LOC102605263), transcript variant X1, mRNA | 3.543307087 |
| CLCdnDe2_132387 | 1 | 1 | 427 | 443 | uv|AF090452.1:1905-2082 | 81 | 97 | Weak | Weak | Suspect[449,452]; | TRUE_BIOLOGICAL | 151341 | 1 | PREDICTED: Solanum tuberosum altered inheritance of mitochondria protein 3 (LOC102600212), mRNA | 3.539823009 |
| TDe_comp67077_c0_seq1 | 1 | 1 | 408 | 423 | uv|U02443.1:882-1073 | 128 | 113 | Weak | Weak | Suspect[424,424]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch03, complete genome | 3.537735849 |
| CLCdnDe10_32939 | 1 | 1 | 10 | 25 | uv|KC614689.1:1-590 | 253 | 238 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum tuberosum clone BAC BC206B16 sequence | 3.537735849 |
| CLCdnDe12_32529 | 1 | 1 | 404 | 419 | uv|KY031726.1:1-7905 | 4975 | 4960 | Weak | Weak | Suspect[420,424]; | TRUE_BIOLOGICAL | 82115 | 1 | PREDICTED: Solanum tuberosum probable leucine-rich repeat receptor-like protein kinase At5g49770 (LOC102592380), partial mRNA | 3.537735849 |
| CLCdnDe12_93019 | 1 | 1 | 397 | 412 | uv|JN874480.1:11708-20103 | 1137 | 1152 | Weak | Weak | Suspect[413,424]; | TRUE_BIOLOGICAL | 357 | 1 | PREDICTED: Solanum tuberosum probable LRR receptor-like serine/threonine-protein kinase At4g20940 (LOC102597109), mRNA | 3.537735849 |
| CLCdnDe14_39705 | 1 | 1 | 4 | 19 | uv|KF718974.2:698-2126 | 375 | 360 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum pennellii uncharacterized LOC107007687 (LOC107007687), mRNA | 3.537735849 |
| CLCdnDe3_19862 | 1 | 1 | 404 | 419 | uv|FJ931533.1:7978-12753-49 | 4346 | 4331 | Weak | Weak | Suspect[420,424]; | TRUE_BIOLOGICAL | 7215 | 1 | Solanum tuberosum cultivar Lemhi UDP-glucose:solanidine glucosyltransferase (Sgt2) mRNA, Sgt2.2 allele, complete cds | 3.537735849 |
| CLCdnDe3_93928 | 1 | 1 | 409 | 424 | uv|KM062046.1:4514-4739 | 161 | 176 | Weak | Weak | None | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 1 mitochondrion, complete sequence | 3.537735849 |
| VdnDe2_168767 | 1 | 1 | 15 | 30 | uv|M77169.1:820-5161 | 2593 | 2578 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum lycopersicum cultivar I-3 chromosome 11 | 3.537735849 |
| VdnDe4_117790 | 1 | 1 | 403 | 418 | uv|KM407512.1:886-4985 | 3493 | 3508 | Weak | Weak | Suspect[419,424]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum histone-lysine N-methyltransferase ATXR7-like (LOC102597311), transcript variant X12, mRNA | 3.537735849 |
| VdnDe1_217211 | 1 | 1 | 5 | 22 | uv|JQ394799.1:1-1559 | 1474 | 1491 | Weak | Moderate | Suspect[1,1]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum type 1 phosphatases regulator ypi1 (LOC102592592), mRNA | 3.534303534 |
| CLCdnDe1_24900 | 1 | 1 | 458 | 475 | uv|U67875.1:5357-5483 | 73 | 90 | Weak | Weak | Suspect[476,481]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum protein NIM1-INTERACTING 2 (LOC102597487), mRNA | 3.534303534 |
| VdnDe1_167212 | 1 | 1 | 1 | 21 | uv|JX069761.1:1-102 | 87 | 67 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum cyclin-B1-2-like (LOC102583237), mRNA | 3.533568905 |
| CLCdnDe13_59173 | 1 | 1 | 433 | 449 | uv|AF379854.1:3-2710 | 2029 | 2045 | Weak | Weak | Suspect[450,453]; | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum tuberosum serine/threonine-protein kinase ATM (LOC102596182), transcript variant X4, mRNA | 3.53200883 |
| CLCdnDe11_32644 | 1 | 1 | 24 | 39 | uv|GU593055.1:13024-13902-49 | 820 | 835 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 2093 | 1 | Solanum pennellii chromosome ch04, complete genome | 3.529411765 |
| CLCdnDe14_82641 | 1 | 1 | 403 | 418 | uv|M77169.1:820-5161 | 888 | 873 | Weak | Weak | Suspect[419,425]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum lycopersicum pentatricopeptide repeat-containing protein At5g47360 (LOC101264355), mRNA | 3.529411765 |
| TDe_comp109133_c2_seq1 | 1 | 1 | 8 | 23 | uv|KF719011.1:2838-2981 | 43 | 58 | Weak | Weak | Suspect[1,7]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum BEL1-like homeodomain protein 3 (LOC102604014), transcript variant X2, mRNA | 3.529411765 |
| VdnDe1_68839 | 1 | 1 | 19 | 34 | uv|JX560397.1:83-5970 | 5101 | 5086 | Weak | Weak | Suspect[1,18]; | TRUE_BIOLOGICAL | 29487 | 1 | PREDICTED: Solanum tuberosum cytochrome P450 704C1-like (LOC102606010), mRNA | 3.529411765 |
| VdnDe2_185526 | 1 | 1 | 409 | 424 | uv|U09128.1:3334-10218 | 992 | 1007 | Weak | Weak | Suspect[425,425]; | TRUE_BIOLOGICAL | 91347 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102593000 (LOC102593000), ncRNA | 3.529411765 |
| VdnDe7_50968 | 1 | 1 | 400 | 415 | uv|KC702237.1:1-1024 | 768 | 783 | Weak | Weak | Suspect[416,425]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum tuberosum clone RHPOTKEY021H18, complete sequence | 3.529411765 |
| CLCdnDe11_49657 | 1 | 1 | 21 | 36 | uv|JF909482.1:3850-8059 | 4040 | 4025 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch06, complete genome | 3.529411765 |
| CLCdnDe3_46416 | 1 | 1 | 16 | 31 | uv|AY093584.1:3788-6062 | 270 | 285 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 5052 | 1 | PREDICTED: Solanum tuberosum putative GEM-like protein 8 (LOC102584784), mRNA | 3.529411765 |
| VdnDe4_5041 | 1 | 1 | 401 | 416 | uv|DQ666274.1:249-3225 | 2720 | 2735 | Weak | Weak | Suspect[417,425]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum dephospho-CoA kinase-like (LOC102587364), transcript variant X7, mRNA | 3.529411765 |
| CLCdnDe12_83942 | 1 | 1 | 426 | 442 | uv|Z46234.1:7923-9273 | 822 | 838 | Weak | Weak | Suspect[443,454]; | TRUE_BIOLOGICAL | 460517 | 1 | Solanum lycopersicum cultivar I-3 chromosome 10 | 3.524229075 |
| VdnDe7_39344 | 1 | 1 | 19 | 35 | uv|KF719017.1:2210-3106 | 293 | 277 | Weak | Weak | Suspect[1,18]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107060860 (LOC107060860), ncRNA | 3.524229075 |
| VdnDe1_177298 | 1 | 1 | 1 | 19 | uv|JX069761.1:1-102 | 87 | 69 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum uncharacterized LOC102584988 (LOC102584988), mRNA | 3.522504892 |
| CLCdnDe11_68025 | 1 | 1 | 401 | 416 | uv|M98046.1:2386-3803 | 403 | 388 | Weak | Weak | Suspect[417,426]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107059500 (LOC107059500), transcript variant X1, ncRNA | 3.521126761 |
| CLCdnDe10_90214 | 1 | 1 | 10 | 25 | uv|U07649.1:927-1024 | 43 | 58 | Weak | Weak | Suspect[1,9]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch08, complete genome | 3.521126761 |
| CLCdnDe11_90739 | 1 | 1 | 401 | 416 | uv|M77169.1:820-5161 | 2045 | 2030 | Weak | Weak | Suspect[422,426]; | TRUE_BIOLOGICAL | 1485 | 1 | PREDICTED: Solanum tuberosum KAT8 regulatory NSL complex subunit 3 (LOC102592873), mRNA | 3.521126761 |
| CLCdnDe13_121037 | 1 | 1 | 394 | 409 | uv|U09663.1:197-287 | 71 | 56 | Weak | Weak | Suspect[414,426]; | TRUE_BIOLOGICAL | 40674 | 1 | PREDICTED: Solanum tuberosum tRNA(His) guanylyltransferase 1-like (LOC102600251), transcript variant X3, mRNA | 3.521126761 |
| CLCdnDe14_114416 | 1 | 1 | 391 | 406 | uv|JF909482.1:3850-8059 | 3498 | 3483 | Weak | Weak | Suspect[407,426]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum histidine decarboxylase-like (LOC102581292), mRNA | 3.521126761 |
| CLCdnDe7_80053 | 1 | 1 | 2 | 17 | uv|JF909467.1:4676-4959 | 125 | 110 | Weak | Weak | Suspect[1,1];Suspect[410,426]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 11 clone RH009L13, complete sequence | 3.521126761 |
| TDe_comp109564_c4_seq10 | 1 | 1 | 3 | 18 | uv|KC702188.1:1-274 | 124 | 109 | Weak | Weak | Suspect[1,2]; | TRUE_BIOLOGICAL | 196118 | 1 | 3.521126761 | |
| VdnDe1_159777 | 1 | 1 | 17 | 32 | uv|U67875.1:6835-8216 | 409 | 394 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 4895 | 1 | Solanum lycopersicum cultivar I-3 chromosome 12 | 3.521126761 |
| VdnDe6_61865 | 1 | 1 | 13 | 28 | uv|KC702194.1:1-1023 | 740 | 755 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum tuberosum chromosome 5 clone RH045L02, complete sequence | 3.521126761 |
| CLCdnDe9_3924 | 1 | 1 | 456 | 473 | uv|AY217101.1:3918-4201 | 178 | 195 | Weak | Weak | Suspect[477,483]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum pre-mRNA-splicing factor CWC22 homolog (LOC102594664), mRNA | 3.519668737 |
| CLCdnDe3_23031 | 1 | 1 | 15 | 31 | uv|AB009864.2:304-865 | 289 | 273 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 9443 | 1 | PREDICTED: Solanum tuberosum tuberculostearic acid methyltransferase UfaA1-like (LOC102587606), mRNA | 3.516483516 |
| TDe_comp331616_c0_seq1 | 1 | 1 | 1 | 17 | uv|FJ710109.1:6726-9221 | 455 | 439 | Weak | Weak | None | TRUE_BIOLOGICAL | 10375 | 1 | Solanum lycopersicum cultivar I-3 chromosome 10 | 3.516483516 |
| VdnDe3_217434 | 1 | 1 | 19 | 35 | uv|U02428.1:5900-6359 | 128 | 112 | Weak | Weak | Suspect[1,18]; | TRUE_BIOLOGICAL | 10375 | 1 | PREDICTED: Frankliniella occidentalis proteoglycan 4-like (LOC113214876), transcript variant X3, mRNA | 3.516483516 |
| VdnDe4_47872 | 1 | 1 | 2 | 18 | uv|M77169.1:820-5161 | 2600 | 2616 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum tuberosum basic endochitinase (LOC102590998), mRNA<>S.tuberosum mRNA for endochitinase | 3.516483516 |
| CLCdnDe12_20527 | 1 | 1 | 23 | 38 | uv|JF909482.1:3850-8059 | 547 | 562 | Weak | Weak | Suspect[1,22]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum lycopersicum cultivar I-3 chromosome 2 | 3.512880562 |
| CLCdnDe12_20527 | 1 | 1 | 412 | 427 | uv|JX069764.1:9741-9848-49 | 116 | 131 | Weak | Weak | Suspect[1,22]; | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 2 | 3.512880562 |
| CLCdnDe11_73417 | 1 | 1 | 398 | 413 | uv|KC702234.1:1-1022 | 377 | 392 | Weak | Weak | Suspect[414,427]; | TRUE_BIOLOGICAL | 196118 | 1 | 3.512880562 | |
| CLCdnDe3_41786 | 1 | 1 | 19 | 34 | uv|J02459.1:1-48502-49 | 36299 | 36314 | Weak | Weak | Suspect[1,18]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102595883 (LOC102595883), transcript variant X1, mRNA | 3.512880562 |
| CLCdnDe6_134121 | 1 | 1 | 405 | 420 | uv|JX560397.1:83-5970 | 5703 | 5718 | Weak | Weak | Suspect[421,427]; | TRUE_BIOLOGICAL | 29487 | 1 | PREDICTED: Solanum tuberosum expansin-B3-like (LOC102599581), mRNA | 3.512880562 |
| CLCdnDe7_174725 | 1 | 1 | 23 | 38 | uv|JN900237.1:1151-3072-49 | 1662 | 1677 | Weak | Weak | Suspect[1,15]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum zinc transporter 5-like (LOC102600170), mRNA | 3.512880562 |
| TDe_comp111874_c0_seq4 | 1 | 1 | 15 | 30 | uv|JN874481.1:57-2095 | 1129 | 1114 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 3705 | 1 | Solanum pennellii chromosome ch02, complete genome | 3.512880562 |
| VdnDe2_174309 | 1 | 1 | 1 | 16 | uv|DQ493885.2:2427-2634 | 46 | 61 | Weak | Weak | None | TRUE_BIOLOGICAL | 6099 | 1 | PREDICTED: Solanum lycopersicum F-box/kelch-repeat protein SKIP30 (LOC101260373), transcript variant X3, mRNA | 3.512880562 |
| VdnDe2_174309 | 1 | 1 | 8 | 23 | uv|AF379854.1:3-2710 | 1452 | 1437 | Weak | Weak | None | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum lycopersicum F-box/kelch-repeat protein SKIP30 (LOC101260373), transcript variant X3, mRNA | 3.512880562 |
| VdnDe6_70827 | 1 | 1 | 412 | 427 | uv|AB009864.2:304-865 | 295 | 310 | Weak | Weak | None | TRUE_BIOLOGICAL | 9443 | 1 | Solanum tuberosum chromosome unknown clone RHPOTKEY012A20, complete sequence | 3.512880562 |
| CLCdnDe2_71246 | 1 | 1 | 15 | 32 | uv|Z46234.1:1-402 | 148 | 165 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 4892 | 1 | 3.512396694 | |
| CLCdnDe8_1333 | 1 | 1 | 18 | 35 | uv|NGB00587.1:1-3232 | 1017 | 1034 | Weak | Weak | Suspect[1,17]; | NO_DATA | 1 | 1 | Solanum tuberosum 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic-like (LOC102592556), mRNA<>Solanum tuberosum clone 099C12 LYTB-like protein precursor-like mRNA, complete cds | 3.512396694 |
| CLCdnDe2_64773 | 1 | 1 | 38 | 60 | uv|JX069761.1:1-102 | 88 | 66 | Weak | Weak | Suspect[1,37]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At4g38150-like (LOC102600073), mRNA | 3.50877193 |
| CLCdnDe13_20207 | 1 | 1 | 3 | 19 | uv|NGB00587.1:1-3232 | 633 | 617 | Weak | Weak | Suspect[1,2]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum lycopersicum fructose-1,6-bisphosphatase, cytosolic (LOC101262700), mRNA | 3.50877193 |
| CLCdnDe13_100795 | 1 | 1 | 5 | 20 | uv|KF719019.1:2203-2843 | 534 | 519 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch07, complete genome | 3.504672897 |
| CLCdnDe14_3534 | 1 | 1 | 6 | 21 | uv|KF718974.2:698-2126 | 477 | 462 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum thioredoxin F1, chloroplastic-like (LOC102579084), mRNA | 3.504672897 |
| CLCdnDe6_101640 | 1 | 1 | 5 | 20 | uv|KF719019.1:2203-2843 | 534 | 519 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch07, complete genome | 3.504672897 |
| CLCdnDe9_22785 | 1 | 1 | 2 | 17 | uv|AF379854.1:3-2710 | 381 | 396 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 5820 | 1 | Solanum tuberosum TATA-box-binding protein-like (LOC102583666), mRNA<>S.tuberosum mRNA for TATA-binding protein | 3.504672897 |
| VdnDe1_24192 | 1 | 1 | 3 | 18 | uv|JF909482.1:3850-8059 | 3654 | 3669 | Weak | Weak | Suspect[1,2]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102592699), mRNA<>Solanum tuberosum UDP-glucose:solanidine glucosyltransferase (sgt2) mRNA, sgt2-2 allele, complete cds | 3.504672897 |
| VdnDe1_24192 | 1 | 1 | 13 | 28 | uv|FJ931533.1:7978-12753-49 | 4331 | 4346 | Weak | Weak | Suspect[1,2]; | TRUE_BIOLOGICAL | 7215 | 1 | Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102592699), mRNA<>Solanum tuberosum UDP-glucose:solanidine glucosyltransferase (sgt2) mRNA, sgt2-2 allele, complete cds | 3.504672897 |
| VdnDe1_24196 | 1 | 1 | 401 | 416 | uv|FJ931533.1:7978-12753-49 | 4346 | 4331 | Weak | Weak | Suspect[427,428]; | TRUE_BIOLOGICAL | 7215 | 1 | Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102592699), mRNA<>Solanum tuberosum UDP-glucose:solanidine glucosyltransferase (sgt2) mRNA, sgt2-2 allele, complete cds | 3.504672897 |
| VdnDe1_24196 | 1 | 1 | 411 | 426 | uv|JF909482.1:3850-8059 | 3669 | 3654 | Weak | Weak | Suspect[427,428]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum tuberosum UDP-glucose flavonoid 3-O-glucosyltransferase 7-like (LOC102592699), mRNA<>Solanum tuberosum UDP-glucose:solanidine glucosyltransferase (sgt2) mRNA, sgt2-2 allele, complete cds | 3.504672897 |
| VdnDe1_159776 | 1 | 1 | 17 | 32 | uv|U67875.1:6835-8216 | 409 | 394 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 4895 | 1 | Solanum lycopersicum cultivar I-3 chromosome 12 | 3.504672897 |
| VdnDe1_199658 | 1 | 1 | 389 | 404 | uv|U67875.1:18-1316 | 719 | 704 | Weak | Weak | Suspect[405,428]; | TRUE_BIOLOGICAL | 4895 | 1 | PREDICTED: Nicotiana tabacum G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (LOC107798094), transcript variant X2, mRNA | 3.504672897 |
| VdnDe1_290643 | 1 | 1 | 14 | 29 | uv|NGB00055.1:1-1950 | 1430 | 1445 | Weak | Weak | Suspect[1,13]; | TRUE_BIOLOGICAL | 558016 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102606345 (LOC102606345), mRNA | 3.504672897 |
| VdnDe7_33918 | 1 | 1 | 8 | 26 | uv|J02459.1:1-48502-49 | 42020 | 42038 | Moderate | Moderate | Suspect[1,7]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum iron-sulfur assembly protein IscA-like 1, mitochondrial (LOC102584224), mRNA | 3.501945525 |
| TDe_comp60810_c0_seq1 | 1 | 1 | 476 | 494 | uv|M77169.1:820-5161 | 2641 | 2659 | Moderate | Moderate | Suspect[495,514]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum pennellii chromosome ch02, complete genome | 3.501945525 |
| CLCdnDe2_70360 | 1 | 1 | 439 | 455 | uv|U13864.1:2748-4229-44 | 976 | 992 | Weak | Weak | Suspect[456,457]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 3.501094092 |
| VdnDe2_221105 | 1 | 1 | 10 | 26 | uv|KC702237.1:1-1024 | 634 | 650 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum tuberosum chromosome 5 clone RH045L02, complete sequence | 3.501094092 |
| CLCdnDe10_43898 | 1 | 1 | 4 | 19 | uv|KM407512.1:886-4985 | 1003 | 988 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 4930 | 1 | 3.496503497 | |
| CLCdnDe14_74394 | 1 | 1 | 20 | 35 | uv|KF718978.1:2204-3575 | 273 | 288 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 3700 | 1 | PREDICTED: Solanum pennellii pentatricopeptide repeat-containing protein At5g15340, mitochondrial (LOC107021773), transcript variant X1, mRNA | 3.496503497 |
| CLCdnDe14_126965 | 1 | 1 | 2 | 17 | uv|AY962893.1:8266-9065 | 431 | 446 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 29487 | 1 | PREDICTED: Nicotiana tabacum cytochrome b561 and DOMON domain-containing protein At3g61750-like (LOC107789283), mRNA | 3.496503497 |
| VdnDe1_295948 | 1 | 1 | 15 | 30 | uv|JF909482.1:3850-8059 | 321 | 336 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum monothiol glutaredoxin-S1-like (LOC107060512), mRNA | 3.496503497 |
| VdnDe1_295948 | 1 | 1 | 18 | 33 | uv|AF102576.1:1-3461 | 3282 | 3297 | Weak | Weak | Suspect[1,14]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum monothiol glutaredoxin-S1-like (LOC107060512), mRNA | 3.496503497 |
| CLCdnDe10_18400 | 1 | 1 | 413 | 428 | uv|U02452.1:2508-2964 | 116 | 101 | Weak | Weak | Suspect[429,429]; | TRUE_BIOLOGICAL | 558016 | 1 | Solanum pennellii chromosome ch06, complete genome | 3.496503497 |
| CLCdnDe3_28871 | 1 | 1 | 406 | 421 | uv|KC702222.1:1-1033 | 758 | 743 | Weak | Weak | Suspect[422,429]; | TRUE_BIOLOGICAL | 33958 | 1 | PREDICTED: Solanum pennellii mitochondrial protein pet191 homolog (LOC107012759), mRNA | 3.496503497 |
| VdnDe4_101974 | 1 | 1 | 22 | 37 | uv|M16217.1:1-2529 | 1797 | 1782 | Weak | Weak | Suspect[1,21]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102591881 (LOC102591881), ncRNA | 3.496503497 |
| CLCdnDe10_133832 | 1 | 1 | 5 | 21 | uv|KF719005.1:2205-5132 | 1448 | 1464 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Rhopalosiphum maidis putative ATP synthase subunit f, mitochondrial (LOC113550950), mRNA | 3.493449782 |
| VdnDe4_126605 | 1 | 1 | 430 | 446 | uv|KC702237.1:1-1024 | 707 | 691 | Weak | Weak | Suspect[447,458]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum UDP-glucose iridoid glucosyltransferase-like (LOC102605457), transcript variant X2, mRNA | 3.493449782 |
| CLCdnDe4_60210 | 1 | 1 | 12 | 27 | uv|JN874480.1:1050-2714 | 499 | 514 | Weak | Weak | Suspect[1,11]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 3.488372093 |
| VdnDe6_70628 | 1 | 1 | 6 | 21 | uv|KC702169.1:1-808 | 104 | 119 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 1386 | 1 | Solanum pennellii chromosome ch10, complete genome | 3.488372093 |
| CLCdnDe10_81621 | 1 | 1 | 24 | 39 | uv|L08934.1:171-1487 | 1086 | 1101 | Weak | Weak | Suspect[1,23]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch03, complete genome | 3.488372093 |
| CLCdnDe11_15351 | 1 | 1 | 414 | 429 | uv|FJ710109.1:6726-9221 | 441 | 456 | Weak | Weak | Suspect[430,430]; | TRUE_BIOLOGICAL | 10375 | 1 | Solanum tuberosum isolate Stu-RTEf non-LTR retrotransposon RTE, partial sequence | 3.488372093 |
| CLCdnDe12_159869 | 1 | 1 | 415 | 430 | uv|JX069764.1:9741-9848-49 | 116 | 131 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum isoleucine N-monooxygenase 1-like (LOC102605273), mRNA | 3.488372093 |
| CLCdnDe13_108173 | 1 | 1 | 2 | 17 | uv|KF853602.1:1019-2932 | 1648 | 1663 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 7711 | 1 | Solanum pennellii chromosome ch03, complete genome | 3.488372093 |
| CLCdnDe1_28943 | 1 | 1 | 406 | 421 | uv|V00604.2:1-6407-49 | 5264 | 5249 | Weak | Weak | Suspect[422,430]; | TRUE_BIOLOGICAL | 10861 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102591840 (LOC102591840), mRNA | 3.488372093 |
| CLCdnDe5_174032 | 1 | 1 | 10 | 25 | uv|GU593055.1:13024-13902-49 | 18 | 33 | Weak | Weak | Suspect[1,9]; | TRUE_BIOLOGICAL | 2132 | 1 | 3.488372093 | |
| VdnDe5_64868 | 1 | 1 | 404 | 419 | uv|KC702237.1:1-1024 | 868 | 883 | Weak | Weak | Suspect[420,430]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102605407 (LOC102605407), transcript variant X1, mRNA | 3.488372093 |
| CLCdnDe11_57019 | 1 | 1 | 429 | 445 | uv|Z46234.1:7923-9273 | 621 | 637 | Weak | Weak | Suspect[446,459]; | TRUE_BIOLOGICAL | 460517 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 3.48583878 |
| VdnDe4_79780 | 1 | 1 | 428 | 444 | uv|KF718989.1:2199-3181 | 765 | 781 | Weak | Weak | Suspect[445,459]; | TRUE_BIOLOGICAL | 3700 | 1 | PREDICTED: Solanum lycopersicum receptor-like protein Cf-9 homolog (LOC101252514), mRNA | 3.48583878 |
| VdnDe4_175557 | 1 | 1 | 24 | 40 | uv|AF519766.1:2372-2991 | 22 | 6 | Weak | Weak | Suspect[1,23]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum 4'-phosphopantetheinyl transferase HetI (LOC102599867), mRNA | 3.48583878 |
| CLCdnDe11_98952 | 1 | 1 | 13 | 28 | uv|U89932.1:553-1856 | 960 | 975 | Weak | Weak | Suspect[1,12]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch05, complete genome | 3.480278422 |
| CLCdnDe11_642 | 1 | 1 | 15 | 30 | uv|KC702206.1:1-523 | 14 | 29 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum cytochrome b-c1 complex subunit 8 (LOC102583699), mRNA | 3.480278422 |
| CLCdnDe12_19216 | 1 | 1 | 21 | 36 | uv|NGB01020.1:535-633 | 21 | 6 | Weak | Weak | Suspect[1,20]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum UDP-glycosyltransferase 73C3-like (LOC102593972), mRNA | 3.480278422 |
| CLCdnDe13_27785 | 1 | 1 | 410 | 425 | uv|NGB00086.1:203-407 | 43 | 28 | Weak | Weak | Suspect[426,431]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum WD repeat-containing protein YMR102C (LOC102593255), transcript variant X2, mRNA | 3.480278422 |
| TDe_comp111068_c2_seq4 | 1 | 1 | 21 | 36 | uv|J02459.1:1-48502-49 | 24582 | 24597 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 3.480278422 |
| VdnDe1_27602 | 1 | 1 | 7 | 22 | uv|M16192.1:1-2517-49 | 1345 | 1360 | Weak | Weak | Suspect[1,6];Suspect[424,431]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum lycopersicum cultivar I-3 chromosome 5 | 3.480278422 |
| VdnDe1_27602 | 1 | 1 | 408 | 423 | uv|AF310136.1:4127-5198 | 768 | 753 | Weak | Weak | Suspect[1,6];Suspect[424,431]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum lycopersicum cultivar I-3 chromosome 5 | 3.480278422 |
| VdnDe1_33602 | 1 | 1 | 397 | 412 | uv|U67875.1:18-1316 | 320 | 335 | Weak | Weak | Suspect[413,431]; | TRUE_BIOLOGICAL | 4895 | 1 | PREDICTED: Solanum tuberosum TMV resistance protein N-like (LOC102606069), transcript variant X2, mRNA | 3.480278422 |
| VdnDe1_108377 | 1 | 1 | 406 | 421 | uv|JX560397.1:83-5970 | 4514 | 4529 | Weak | Weak | Suspect[422,431]; | TRUE_BIOLOGICAL | 1236 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102583417 (LOC102583417), mRNA | 3.480278422 |
| TDe_comp92120_c0_seq1 | 1 | 1 | 1 | 17 | uv|JX069763.1:9818-9863-49 | 12 | 28 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 5 | 3.47826087 |
| VdnDe6_12692 | 1 | 1 | 462 | 479 | uv|NGB00413.1:4732-7508 | 138 | 155 | Weak | Weak | Suspect[480,489]; | TRUE_BIOLOGICAL | 12103 | 1 | PREDICTED: Solanum tuberosum uncharacterized protein OsI_027940-like (LOC102603559), mRNA | 3.476482618 |
| VdnDe2_261149 | 1 | 1 | 25 | 42 | uv|KF718979.1:2206-6730 | 4403 | 4420 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum probable glutathione S-transferase (LOC102599054), mRNA | 3.476482618 |
| CLCdnDe10_136853 | 1 | 1 | 417 | 432 | uv|L05083.1:2309-2762 | 194 | 209 | Weak | Weak | None | NO_DATA | 1 | 1 | Arcobacter bivalviorum strain LMG 26154 chromosome, complete genome | 3.472222222 |
| CLCdnDe12_94878 | 1 | 1 | 413 | 428 | uv|L19900.1:803-1010 | 201 | 186 | Weak | Weak | Suspect[429,432]; | TRUE_BIOLOGICAL | 10294 | 1 | 3.472222222 | |
| CLCdnDe12_71399 | 1 | 1 | 16 | 31 | uv|Z29589.1:3211-4486 | 415 | 400 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 4527 | 1 | 3.472222222 | |
| CLCdnDe5_71892 | 1 | 1 | 16 | 31 | uv|Z29589.1:3211-4486 | 415 | 400 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 4527 | 1 | 3.472222222 | |
| VdnDe2_56236 | 1 | 1 | 402 | 417 | uv|JN581374.1:616-2149 | 1432 | 1447 | Weak | Weak | Suspect[418,432]; | TRUE_BIOLOGICAL | 4930 | 1 | 3.472222222 | |
| VdnDe4_74772 | 1 | 1 | 406 | 421 | uv|EU496103.1:133-236 | 58 | 43 | Weak | Weak | Suspect[422,432]; | NO_DATA | 1 | 1 | Solanum tuberosum clone BAC 14B N-like putative resistance gene 1, N-like putative resistance gene 2, N-like putative resistance gene 3, and putative lyases genes, complete cds, complete sequence | 3.472222222 |
| VdnDe4_100726 | 1 | 1 | 402 | 417 | uv|M16217.1:1-2529 | 541 | 556 | Weak | Weak | Suspect[418,432]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum glutathione transferase GST 23-like (LOC107057662), mRNA | 3.472222222 |
| CLCdnDe2_130415 | 1 | 1 | 434 | 450 | uv|KF718995.1:2216-3853 | 544 | 560 | Weak | Weak | Suspect[451,461]; | NO_DATA | 1 | 1 | PREDICTED: Cucumis sativus nigrin b (LOC101207729), mRNA | 3.470715835 |
| CLCdnDe7_8283 | 1 | 1 | 429 | 445 | uv|KF719019.1:2203-2843 | 386 | 370 | Weak | Weak | Suspect[446,461]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum 60S ribosomal protein L35 (LOC102598040), mRNA | 3.470715835 |
| CLCdnDe9_48211 | 1 | 1 | 9 | 30 | uv|JX069761.1:1-102 | 88 | 67 | Moderate | Moderate | Suspect[1,8]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum serine/threonine-protein kinase CTR1-like (LOC102594268), transcript variant X5, mRNA | 3.465346535 |
| CLCdnDe11_67236 | 1 | 1 | 403 | 418 | uv|AY568055.1:6692-7837 | 410 | 425 | Weak | Weak | Suspect[419,433]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 3.464203233 |
| CLCdnDe7_164735 | 1 | 1 | 17 | 32 | uv|KY031737.1:1-5023 | 4681 | 4666 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 82115 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 3.464203233 |
| CLCdnDe10_9641 | 1 | 1 | 4 | 19 | uv|X06779.1:1-4734 | 733 | 748 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 7215 | 1 | PREDICTED: Solanum tuberosum protein FREE1-like (LOC102600420), mRNA | 3.464203233 |
| CLCdnDe13_107733 | 1 | 1 | 411 | 426 | uv|KF680545.1:1-2837 | 2528 | 2543 | Weak | Weak | Suspect[427,433]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch09, complete genome | 3.464203233 |
| CLCdnDe14_11789 | 1 | 1 | 25 | 40 | uv|U67875.1:18-1316 | 1026 | 1041 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 4895 | 1 | PREDICTED: Solanum tuberosum vacuolar amino acid transporter 1 (LOC102589686), mRNA | 3.464203233 |
| VdnDe4_93955 | 1 | 1 | 5 | 20 | uv|AF083409.1:325-423 | 85 | 70 | Weak | Weak | Suspect[1,4]; | NO_DATA | 1 | 1 | 3.464203233 | |
| CLCdnDe10_70004 | 1 | 1 | 437 | 453 | uv|AF327712.1:1582-7289 | 892 | 876 | Weak | Weak | Suspect[454,462]; | TRUE_BIOLOGICAL | 286 | 1 | 3.463203463 | |
| CLCdnDe2_16441 | 1 | 1 | 38 | 62 | uv|JX069761.1:1-102 | 88 | 64 | Moderate | Moderate | Suspect[1,37]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum transaldolase (LOC102581220), mRNA | 3.458213256 |
| CLCdnDe2_11081 | 1 | 1 | 716 | 743 | uv|NGB00756.1:1-65 | 38 | 65 | Moderate | Moderate | Suspect[744,781]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum dnaJ homolog subfamily C member 17 (LOC102590794), transcript variant X6, mRNA | 3.457106274 |
| VdnDe1_173438 | 1 | 1 | 1 | 16 | uv|GQ231553.1:512-1019 | 340 | 325 | Weak | Weak | None | TRUE_BIOLOGICAL | 1301 | 1 | Solanum lycopersicum cultivar I-3 chromosome 6 | 3.456221198 |
| CLCdnDe7_47481 | 1 | 1 | 6 | 21 | uv|AF102576.1:1-3461 | 3295 | 3280 | Weak | Weak | Suspect[1,5]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum phospholipase D C-like (LOC102600053), mRNA | 3.456221198 |
| CLCdnDe8_1045 | 1 | 1 | 398 | 413 | uv|J02459.1:1-48502-49 | 31196 | 31181 | Weak | Weak | Suspect[414,434]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum chlorophyll a-b binding protein 1B, chloroplastic-like (LOC102596765), mRNA | 3.456221198 |
| VdnDe1_290644 | 1 | 1 | 14 | 29 | uv|NGB00055.1:1-1950 | 1430 | 1445 | Weak | Weak | Suspect[1,13]; | TRUE_BIOLOGICAL | 558016 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102606345 (LOC102606345), mRNA | 3.456221198 |
| VdnDe1_315106 | 1 | 1 | 16 | 31 | uv|NGB00587.1:1-3232 | 1850 | 1835 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum lycopersicum cultivar I-3 chromosome 2 | 3.456221198 |
| VdnDe3_116808 | 1 | 1 | 404 | 419 | uv|M16217.1:1-2529 | 541 | 556 | Weak | Weak | Suspect[420,434]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum glutathione transferase GST 23-like (LOC107057662), mRNA | 3.456221198 |
| VdnDe3_151644 | 1 | 1 | 13 | 28 | uv|KC702237.1:1-1024 | 432 | 447 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 3.456221198 |
| VdnDe4_104144 | 1 | 1 | 407 | 422 | uv|Z46234.1:1-402 | 302 | 287 | Weak | Weak | Suspect[423,434]; | TRUE_BIOLOGICAL | 4892 | 1 | Solanum pennellii chromosome ch09, complete genome | 3.456221198 |
| CLCdnDe1_3990 | 1 | 1 | 427 | 443 | uv|JQ927446.1:4885-6835-49 | 997 | 981 | Weak | Weak | Suspect[444,463]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum probable WRKY transcription factor 70 (LOC102581335), mRNA | 3.455723542 |
| CLCdnDe6_129982 | 1 | 1 | 447 | 463 | uv|JX069762.1:9774-9902-49 | 114 | 98 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 1 | 3.455723542 |
| VdnDe6_92342 | 1 | 1 | 3 | 22 | uv|AY301066.1:1-1261 | 1104 | 1085 | Moderate | Moderate | Suspect[1,2]; | TRUE_BIOLOGICAL | 28105 | 1 | PREDICTED: Solanum tuberosum mediator-associated protein 2-like (LOC102581829), mRNA | 3.448275862 |
| TDe_comp95168_c1_seq1 | 1 | 1 | 23 | 40 | uv|KC702199.1:1-273 | 209 | 226 | Weak | Weak | Suspect[1,22]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102595957 (LOC102595957), transcript variant X3, mRNA | 3.448275862 |
| VdnDe2_177789 | 1 | 1 | 16 | 32 | uv|J02459.1:1-48502-49 | 23715 | 23731 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum transmembrane ascorbate ferrireductase 1 (LOC102596012), mRNA | 3.448275862 |
| VdnDe6_67865 | 1 | 1 | 22 | 37 | uv|EU048870.1:6860-8251 | 486 | 471 | Weak | Weak | Suspect[1,21]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch04, complete genome | 3.448275862 |
| CLCdnDe10_39536 | 1 | 1 | 404 | 419 | uv|KM407506.1:2354-4632 | 1840 | 1825 | Weak | Weak | Suspect[420,435]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102587666 (LOC102587666), transcript variant X4, ncRNA | 3.448275862 |
| CLCdnDe11_150973 | 1 | 1 | 397 | 412 | uv|KC702178.1:1-2022 | 1167 | 1152 | Weak | Weak | Suspect[413,435]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum lycopersicum cultivar I-3 chromosome 7 | 3.448275862 |
| CLCdnDe13_145573 | 1 | 1 | 399 | 414 | uv|M16192.1:1-2517-49 | 1537 | 1522 | Weak | Weak | Suspect[415,435]; | TRUE_BIOLOGICAL | 1279 | 1 | Nicotiana otophora endogenous pararetrovirus partial proviral ORF1 pseudogene | 3.448275862 |
| CLCdnDe14_6522 | 1 | 1 | 398 | 413 | uv|U13860.1:6124-7626-49 | 191 | 176 | Weak | Weak | Suspect[414,435]; | TRUE_BIOLOGICAL | 140052 | 1 | PREDICTED: Solanum tuberosum 40S ribosomal protein S11-like (LOC102585207), mRNA | 3.448275862 |
| CLCdnDe14_85692 | 1 | 1 | 406 | 421 | uv|DQ092493.1:5324-5419 | 15 | 30 | Weak | Weak | Suspect[422,435]; | TRUE_BIOLOGICAL | 91347 | 1 | PREDICTED: Solanum tuberosum putative disease resistance RPP13-like protein 1 (LOC102606358), transcript variant X3, mRNA | 3.448275862 |
| CLCdnDe2_11929 | 1 | 1 | 415 | 430 | uv|KM407503.1:195-967 | 304 | 289 | Weak | Weak | Suspect[431,435]; | TRUE_BIOLOGICAL | 33208 | 1 | PREDICTED: Solanum tuberosum ammonium transporter 1 member 1 (LOC102578709), partial mRNA | 3.448275862 |
