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| CLCdnDe2_14050 | 1 | 1 | 3 | 21 | uv|AY390769.1:1-1000 | 531 | 549 | Moderate | Moderate | Suspect[1,2]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum elongation factor G, chloroplastic (LOC102584198), mRNA | 4.358353511 |
| VdnDe1_99765 | 1 | 1 | 391 | 409 | uv|GU827641.1:1944-2103 | 75 | 93 | Moderate | Moderate | Suspect[410,413]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum miraculin-like (LOC102597537), mRNA | 4.358353511 |
| VdnDe1_135848 | 1 | 1 | 25 | 46 | uv|FJ710109.1:6726-9221 | 2235 | 2214 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 10375 | 1 | Solanum tuberosum probable U6 snRNA-associated Sm-like protein LSm4-like (LOC102583085), mRNA<>Solanum tuberosum clone 183G06 glycine rich protein-like mRNA, complete cds | 4.356846473 |
| CLCdnDe10_128897 | 1 | 1 | 373 | 390 | uv|U30497.1:3230-4814 | 226 | 209 | Weak | Weak | Suspect[391,391]; | NO_DATA | 1 | 1 | 4.347826087 | |
| TDe_comp584373_c0_seq1 | 1 | 1 | 8 | 25 | uv|AF379854.1:4263-5841 | 1415 | 1398 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 5820 | 1 | Phaedon tumidulus mitochondrion, partial genome | 4.347826087 |
| CLCdnDe11_14163 | 1 | 1 | 372 | 389 | uv|AF379854.1:4263-5841 | 1217 | 1200 | Weak | Weak | Suspect[390,391]; | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At2g06000 (LOC102597229), transcript variant X1, mRNA | 4.347826087 |
| CLCdnDe5_168920 | 1 | 1 | 352 | 368 | uv|JX069763.1:9818-9863-49 | 63 | 79 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum pennellii chromosome ch02, complete genome | 4.347826087 |
| TDe_comp62580_c0_seq1 | 1 | 1 | 1 | 17 | uv|J02459.1:1-48502-49 | 36956 | 36940 | Weak | Weak | None | TRUE_BIOLOGICAL | 10699 | 1 | 4.347826087 | |
| CLCdnDe3_2032 | 1 | 1 | 345 | 361 | uv|DQ666274.1:249-3225 | 2638 | 2654 | Weak | Weak | Suspect[362,368]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum bidirectional sugar transporter N3 (LOC102598354), mRNA | 4.347826087 |
| VdnDe2_266944 | 1 | 1 | 333 | 349 | uv|KC702182.1:1-1023 | 427 | 411 | Weak | Weak | Suspect[350,368]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum zinc finger protein ZAT11-like (LOC102583697), mRNA | 4.347826087 |
| CLCdnDe10_117404 | 1 | 1 | 6 | 21 | uv|U55760.1:1-2749 | 660 | 645 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 558016 | 1 | Solanum pennellii chromosome ch04, complete genome | 4.347826087 |
| CLCdnDe10_117404 | 1 | 1 | 13 | 28 | uv|KC702209.1:1-2022 | 192 | 177 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum pennellii chromosome ch04, complete genome | 4.347826087 |
| CLCdnDe2_102018 | 1 | 1 | 310 | 325 | uv|J02459.1:1-48502-49 | 34654 | 34639 | Weak | Weak | Suspect[326,345]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.347826087 |
| CLCdnDe6_135110 | 1 | 1 | 18 | 33 | uv|KC702232.1:1-523 | 462 | 477 | Weak | Weak | Suspect[1,17]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum heterogeneous nuclear ribonucleoprotein H2 (LOC102604361), transcript variant X2, mRNA | 4.347826087 |
| TDe_comp97530_c0_seq1 | 1 | 1 | 316 | 331 | uv|U09365.1:1592-3128 | 1204 | 1219 | Weak | Weak | Suspect[332,345]; | NO_DATA | 1 | 1 | 4.347826087 | |
| TDe_comp100230_c0_seq2 | 1 | 1 | 2 | 17 | uv|L05669.1:1-1770 | 1381 | 1366 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum pennellii chromosome ch04, complete genome | 4.347826087 |
| VdnDe4_98846 | 1 | 1 | 324 | 339 | uv|KM407512.1:886-4985 | 1185 | 1170 | Weak | Weak | Suspect[340,345]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum paladin (LOC102603371), transcript variant X3, mRNA | 4.347826087 |
| CLCdnDe10_20916 | 1 | 1 | 5 | 20 | uv|LC121523.1:14-110 | 8 | 23 | Weak | Weak | Suspect[1,4]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum miraculin-like (LOC102597848), mRNA | 4.347826087 |
| CLCdnDe12_170696 | 1 | 1 | 314 | 329 | uv|U74374.1:2356-2450-49 | 115 | 130 | Weak | Weak | Suspect[330,345]; | NO_DATA | 1 | 1 | Hordeum vulgare subsp. vulgare cDNA clone: FLbaf90k19, mRNA sequence | 4.347826087 |
| CLCdnDe10_106559 | 1 | 1 | 397 | 415 | uv|JX069761.1:1-102 | 65 | 83 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus uncharacterized LOC101221356 (LOC101221356), transcript variant X1, mRNA | 4.337349398 |
| CLCdnDe10_68805 | 1 | 1 | 2 | 19 | uv|M16217.1:3121-3879-49 | 474 | 491 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.336734694 |
| CLCdnDe10_121143 | 1 | 1 | 14 | 30 | uv|JX560397.1:83-5970 | 1503 | 1519 | Weak | Weak | Suspect[1,13]; | TRUE_BIOLOGICAL | 1236 | 1 | Solanum pennellii chromosome ch09, complete genome | 4.33604336 |
| CLCdnDe2_107707 | 1 | 1 | 340 | 356 | uv|KM407512.1:886-4985 | 1180 | 1164 | Weak | Weak | Suspect[357,369]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 8 | 4.33604336 |
| CLCdnDe10_113319 | 1 | 1 | 13 | 28 | uv|X51450.1:1-1204 | 56 | 41 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.335260116 |
| CLCdnDe11_63188 | 1 | 1 | 23 | 38 | uv|AF061931.1:2946-4188-49 | 1027 | 1042 | Weak | Weak | Suspect[1,22]; | NO_DATA | 1 | 1 | 4.335260116 | |
| CLCdnDe11_75401 | 1 | 1 | 317 | 332 | uv|U89932.1:553-1856 | 1121 | 1136 | Weak | Weak | Suspect[333,346]; | NO_DATA | 1 | 1 | 4.335260116 | |
| CLCdnDe14_126473 | 1 | 1 | 20 | 35 | uv|AF013258.1:557-763 | 21 | 36 | Weak | Weak | Suspect[1,19]; | NO_DATA | 1 | 1 | 4.335260116 | |
| CLCdnDe14_128542 | 1 | 1 | 3 | 18 | uv|KY031730.1:8482-8679 | 135 | 150 | Weak | Weak | Suspect[1,2]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102592667 (LOC102592667), transcript variant X14, misc_RNA | 4.335260116 |
| CLCdnDe2_122619 | 1 | 1 | 323 | 338 | uv|JX310867.1:868-3760 | 2453 | 2468 | Weak | Weak | Suspect[339,346]; | TRUE_BIOLOGICAL | 1224 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.335260116 |
| VdnDe2_3496 | 1 | 1 | 4 | 19 | uv|L08860.1:1-1129 | 122 | 137 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 1279 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 4.335260116 |
| CLCdnDe10_26228 | 1 | 1 | 1 | 16 | uv|JX069762.1:9774-9902-49 | 99 | 114 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum protein trichome birefringence-like 19 (LOC102595520), mRNA | 4.335260116 |
| CLCdnDe14_34998 | 1 | 1 | 13 | 28 | uv|KF718989.1:2199-3181 | 111 | 126 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 3700 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102588109 (LOC102588109), transcript variant X3, mRNA | 4.335260116 |
| CLCdnDe2_45399 | 1 | 1 | 16 | 31 | uv|KC702178.1:1-2022 | 881 | 896 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum polygalacturonase inhibitor-like (LOC102585477), mRNA | 4.335260116 |
| CLCdnDe3_26406 | 1 | 1 | 1 | 16 | uv|JX069762.1:9774-9902-49 | 99 | 114 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum protein trichome birefringence-like 19 (LOC102595520), mRNA | 4.335260116 |
| CLCdnDe3_42939 | 1 | 1 | 1 | 16 | uv|KF718979.1:2206-6730 | 4418 | 4403 | Weak | Weak | None | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum probable glutathione S-transferase (LOC102602051), mRNA | 4.335260116 |
| VdnDe1_127813 | 1 | 1 | 310 | 325 | uv|FJ750577.1:368-2560 | 531 | 546 | Weak | Weak | Suspect[326,346]; | TRUE_BIOLOGICAL | 4447 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107059562 (LOC107059562), ncRNA | 4.335260116 |
| VdnDe6_49294 | 1 | 1 | 1 | 16 | uv|AH003157.2:2961-3056 | 16 | 31 | Weak | Weak | None | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum DEAD-box ATP-dependent RNA helicase 1-like (LOC102580927), transcript variant X1, mRNA | 4.335260116 |
| VdnDe6_103738 | 1 | 1 | 3 | 18 | uv|M98046.1:2386-3803 | 770 | 785 | Weak | Weak | Suspect[1,2]; | TRUE_BIOLOGICAL | 4930 | 1 | PREDICTED: Solanum tuberosum KRR1 small subunit processome component (LOC102598523), mRNA | 4.335260116 |
| VdnDe7_58774 | 1 | 1 | 318 | 333 | uv|KC702174.1:1-273 | 159 | 144 | Weak | Weak | Suspect[334,346]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum tuberosum chromosome 11 clone RH186L12, complete sequence | 4.335260116 |
| VdnDe4_81233 | 1 | 1 | 834 | 885 | uv|AF028837.1:1577-1628 | 52 | 1 | Strong | Strong | Suspect[1069,1075]; | NO_DATA | 1 | 1 | Acinetobacter baumannii expression vector pOT-RA, complete sequence | 4.325699746 |
| VdnDe1_100129 | 1 | 1 | 372 | 389 | uv|KJ541672.1:2690-2839 | 49 | 66 | Weak | Weak | Suspect[390,393]; | NO_DATA | 1 | 1 | PREDICTED: Solanum pennellii probable amino acid permease 7 (LOC107026352), mRNA | 4.325699746 |
| CLCdnDe11_60543 | 1 | 1 | 25 | 41 | uv|KC702231.1:1-1021 | 556 | 540 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum thaumatin-like protein (LOC102591494), mRNA | 4.324324324 |
| CLCdnDe12_131341 | 1 | 1 | 346 | 362 | uv|U02428.1:5900-6359 | 132 | 116 | Weak | Weak | Suspect[363,370]; | TRUE_BIOLOGICAL | 10375 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102584707 (LOC102584707), mRNA | 4.324324324 |
| CLCdnDe13_69340 | 1 | 1 | 21 | 37 | uv|AF379854.1:3-2710 | 1451 | 1467 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 5820 | 1 | PREDICTED: Solanum tuberosum inositol 3-kinase (LOC102588803), transcript variant X2, mRNA | 4.324324324 |
| CLCdnDe4_4366 | 1 | 1 | 8 | 24 | uv|JN874480.1:1050-2714 | 440 | 456 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum demissum isolate 10I24d disease resistance protein R3a-like protein gene, complete cds | 4.324324324 |
| TDe_comp55_c0_seq1 | 1 | 1 | 15 | 31 | uv|U02436.1:3152-4436 | 670 | 686 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum pennellii chromosome ch02, complete genome | 4.324324324 |
| CLCdnDe10_91439 | 1 | 1 | 322 | 337 | uv|U55759.1:1126-1222 | 23 | 8 | Weak | Weak | Suspect[338,347]; | NO_DATA | 1 | 1 | 4.322766571 | |
| CLCdnDe10_91721 | 1 | 1 | 321 | 336 | uv|JX310867.1:868-3760 | 1890 | 1905 | Weak | Weak | Suspect[337,347]; | TRUE_BIOLOGICAL | 1224 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.322766571 |
| CLCdnDe12_146614 | 1 | 1 | 318 | 333 | uv|Z32692.1:1-221 | 64 | 79 | Weak | Weak | Suspect[334,347]; | TRUE_BIOLOGICAL | 10242 | 1 | Plasmodium falciparum genome assembly, chromosome: 11 | 4.322766571 |
| CLCdnDe2_91812 | 1 | 1 | 9 | 24 | uv|M77169.1:820-5161 | 2575 | 2590 | Weak | Weak | Suspect[1,8]; | TRUE_BIOLOGICAL | 1485 | 1 | 4.322766571 | |
| CLCdnDe4_136789 | 1 | 1 | 328 | 343 | uv|KF680545.1:1-2837 | 2121 | 2136 | Weak | Weak | Suspect[344,347]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 4.322766571 |
| CLCdnDe4_149812 | 1 | 1 | 325 | 340 | uv|KY031734.1:6836-6942 | 41 | 26 | Weak | Weak | Suspect[341,347]; | TRUE_BIOLOGICAL | 91347 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.322766571 |
| CLCdnDe11_76918 | 1 | 1 | 23 | 38 | uv|KF718979.1:2206-6730 | 4337 | 4322 | Weak | Weak | Suspect[1,22]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum peptidyl-prolyl cis-trans isomerase CYP59-like (LOC102583150), mRNA | 4.322766571 |
| CLCdnDe11_158825 | 1 | 1 | 322 | 337 | uv|KY031736.1:1-4885 | 3217 | 3232 | Weak | Weak | Suspect[338,347]; | TRUE_BIOLOGICAL | 82115 | 1 | Picea glauca clone GQ0201_A01 mRNA sequence | 4.322766571 |
| CLCdnDe12_147807 | 1 | 1 | 319 | 334 | uv|JX025642.1:5090-5607 | 210 | 195 | Weak | Weak | Suspect[335,347]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 4.322766571 |
| CLCdnDe3_69793 | 1 | 1 | 311 | 326 | uv|U67875.1:18-1316 | 861 | 876 | Weak | Weak | Suspect[327,347]; | TRUE_BIOLOGICAL | 4895 | 1 | PREDICTED: Solanum pennellii TMV resistance protein N-like (LOC107008089), mRNA | 4.322766571 |
| CLCdnDe5_118960 | 1 | 1 | 8 | 23 | uv|KC702237.1:1-1024 | 362 | 347 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 4.322766571 |
| CLCdnDe5_144908 | 1 | 1 | 9 | 24 | uv|FJ931533.1:7978-12753-49 | 993 | 1008 | Weak | Weak | Suspect[1,8]; | TRUE_BIOLOGICAL | 7215 | 1 | Solanum bulbocastanum forever young oxidoreductase (FEY) gene, complete cds | 4.322766571 |
| CLCdnDe6_168401 | 1 | 1 | 8 | 23 | uv|KY031734.1:6836-6942 | 26 | 41 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 91347 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.322766571 |
| TDe_comp109168_c1_seq4 | 1 | 1 | 24 | 39 | uv|X13003.1:2753-4028 | 886 | 871 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 561 | 1 | PREDICTED: Solanum tuberosum B3 domain-containing protein REM19-like (LOC102592895), transcript variant X2, misc_RNA | 4.322766571 |
| VdnDe1_238034 | 1 | 1 | 317 | 332 | uv|M16217.1:1-2529 | 1230 | 1245 | Weak | Weak | Suspect[333,347]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum NEDD8-activating enzyme E1 regulatory subunit-like (LOC102602774), transcript variant X2, mRNA | 4.322766571 |
| VdnDe3_184960 | 1 | 1 | 22 | 37 | uv|L05669.1:6338-6436 | 38 | 53 | Weak | Weak | Suspect[1,21]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107061605 (LOC107061605), ncRNA | 4.322766571 |
| CLCdnDe10_76747 | 1 | 1 | 347 | 363 | uv|M28829.1:1-8684-49 | 5358 | 5342 | Weak | Weak | Suspect[364,371]; | TRUE_BIOLOGICAL | 561 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.312668464 |
| TDe_comp110455_c0_seq22 | 1 | 1 | 341 | 357 | uv|KM407510.1:737-1318 | 435 | 451 | Weak | Weak | Suspect[358,371]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum F-box/kelch-repeat protein At3g23880-like (LOC102590482), transcript variant X2, mRNA | 4.312668464 |
| TDe_comp110483_c1_seq13 | 1 | 1 | 355 | 371 | uv|KY031725.1:1-5101 | 4487 | 4503 | Weak | Weak | None | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107058235 (LOC107058235), ncRNA | 4.312668464 |
| CLCdnDe10_76519 | 1 | 1 | 321 | 336 | uv|KP057689.1:1-859 | 449 | 434 | Weak | Weak | Suspect[337,348]; | TRUE_BIOLOGICAL | 84111 | 1 | Solanum lycopersicum clone BAC CaCM487E08-Tomato, complete sequence | 4.310344828 |
| CLCdnDe10_99242 | 1 | 1 | 21 | 36 | uv|U14124.1:3579-3677 | 27 | 12 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 460517 | 1 | Solanum lycopersicum cultivar I-3 chromosome 6 | 4.310344828 |
| CLCdnDe10_120939 | 1 | 1 | 318 | 333 | uv|KF718979.1:2206-6730 | 4193 | 4208 | Weak | Weak | Suspect[334,348]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch08, complete genome | 4.310344828 |
| CLCdnDe12_32516 | 1 | 1 | 8 | 23 | uv|GU593055.1:13024-13902-49 | 699 | 714 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 2132 | 1 | Solanum pennellii chromosome ch03, complete genome | 4.310344828 |
| CLCdnDe13_105309 | 1 | 1 | 332 | 347 | uv|KC702236.1:1-1024 | 876 | 891 | Weak | Weak | Suspect[348,348]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum LRR receptor-like serine/threonine-protein kinase EFR (LOC107058948), mRNA | 4.310344828 |
| CLCdnDe13_149807 | 1 | 1 | 1 | 16 | uv|JX069763.1:9818-9863-49 | 12 | 27 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 6 | 4.310344828 |
| CLCdnDe14_142267 | 1 | 1 | 331 | 346 | uv|JN874480.1:6795-9434 | 1896 | 1881 | Weak | Weak | Suspect[347,348]; | TRUE_BIOLOGICAL | 40674 | 1 | 4.310344828 | |
| VdnDe1_134649 | 1 | 1 | 4 | 19 | uv|JX310867.1:868-3760 | 814 | 799 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 1224 | 1 | 4.310344828 | |
| VdnDe2_54360 | 1 | 1 | 311 | 326 | uv|KF853601.1:1021-3588 | 796 | 781 | Weak | Weak | Suspect[327,348]; | TRUE_BIOLOGICAL | 7711 | 1 | Solanum pennellii chromosome ch04, complete genome | 4.310344828 |
| CLCdnDe10_109536 | 1 | 1 | 2 | 17 | uv|KF718983.1:3586-3684 | 32 | 17 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum tuberosum chromosome 11 clone RH067L08, complete sequence | 4.310344828 |
| CLCdnDe11_114354 | 1 | 1 | 310 | 325 | uv|AF310136.1:497-2034 | 1155 | 1140 | Weak | Weak | Suspect[326,348]; | TRUE_BIOLOGICAL | 91347 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 4.310344828 |
| CLCdnDe12_78052 | 1 | 1 | 5 | 20 | uv|U02452.1:4310-5466 | 110 | 95 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 558016 | 1 | Solanum pennellii chromosome ch09, complete genome | 4.310344828 |
| CLCdnDe14_73247 | 1 | 1 | 313 | 328 | uv|NGB00587.1:1-3232 | 1635 | 1650 | Weak | Weak | Suspect[329,348]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 11 clone RH067L08, complete sequence | 4.310344828 |
| CLCdnDe2_118339 | 1 | 1 | 318 | 333 | uv|KF718979.1:2206-6730 | 4193 | 4208 | Weak | Weak | Suspect[334,348]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch08, complete genome | 4.310344828 |
| CLCdnDe3_124856 | 1 | 1 | 318 | 333 | uv|KF718979.1:2206-6730 | 4193 | 4208 | Weak | Weak | Suspect[334,348]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch08, complete genome | 4.310344828 |
| CLCdnDe6_13759 | 1 | 1 | 314 | 329 | uv|U04894.1:22-222 | 140 | 155 | Weak | Weak | Suspect[330,348]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102591555 (LOC102591555), ncRNA | 4.310344828 |
| TDe_comp112905_c0_seq6 | 1 | 1 | 322 | 337 | uv|LC121524.1:2980-3796 | 470 | 485 | Weak | Weak | Suspect[338,348]; | NO_DATA | 1 | 1 | Solanum demissum chromosome 5 clone PGEC517A09, complete sequence | 4.310344828 |
| TDe_comp553794_c0_seq1 | 1 | 1 | 7 | 22 | uv|KC702184.1:1-1156 | 143 | 128 | Weak | Weak | Suspect[1,6]; | TRUE_ARTIFICIAL | 81077 | 81077 | 4.310344828 | |
| VdnDe1_138094 | 1 | 1 | 322 | 337 | uv|U02450.1:1-153 | 80 | 95 | Weak | Weak | Suspect[338,348]; | TRUE_BIOLOGICAL | 558016 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107060910 (LOC107060910), ncRNA | 4.310344828 |
| VdnDe1_220338 | 1 | 1 | 10 | 25 | uv|AY568055.1:6692-7837 | 413 | 428 | Weak | Weak | Suspect[1,9]; | NO_DATA | 1 | 1 | 4.310344828 | |
| VdnDe3_6515 | 1 | 1 | 1276 | 1337 | uv|NGB00135.2:1326-1423 | 98 | 37 | Strong | Strong | Suspect[287,333];Suspect[579,583]; | NO_DATA | 1 | 1 | Cloning vector pHELLSGATE | 4.304869442 |
| VdnDe2_127550 | 1 | 1 | 363 | 380 | uv|J02482.1:1-5386-49 | 1762 | 1745 | Weak | Weak | Suspect[381,395]; | TRUE_BIOLOGICAL | 10842 | 1 | PREDICTED: Solanum tuberosum alpha-dioxygenase 1-like (LOC102583448), mRNA | 4.303797468 |
| VdnDe2_127551 | 1 | 1 | 16 | 33 | uv|J02482.1:1-5386-49 | 1745 | 1762 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 10842 | 1 | PREDICTED: Solanum tuberosum alpha-dioxygenase 1-like (LOC102583448), mRNA | 4.303797468 |
| VdnDe2_127554 | 1 | 1 | 16 | 33 | uv|J02482.1:1-5386-49 | 1745 | 1762 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 10842 | 1 | PREDICTED: Solanum tuberosum alpha-dioxygenase 1-like (LOC102583448), mRNA | 4.303797468 |
| VdnDe3_95557 | 1 | 1 | 30 | 46 | uv|KF718979.1:2206-6730 | 4125 | 4109 | None | Moderate | Suspect[1,14]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum lycopersicum uncharacterized LOC104648643 (LOC104648643), mRNA | 4.301075269 |
| CLCdnDe10_110476 | 1 | 1 | 342 | 358 | uv|Z50120.1:1215-5191 | 3558 | 3574 | Weak | Weak | Suspect[359,372]; | TRUE_BIOLOGICAL | 91347 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.301075269 |
| CLCdnDe10_126083 | 1 | 1 | 347 | 363 | uv|KF719014.1:2590-2954 | 215 | 199 | Weak | Weak | Suspect[364,372]; | TRUE_BIOLOGICAL | 163743 | 1 | Solanum lycopersicum cultivar I-3 chromosome 9 | 4.301075269 |
| CLCdnDe10_127311 | 1 | 1 | 356 | 372 | uv|JX069761.1:9887-9905-49 | 33 | 49 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 2 | 4.301075269 |
| CLCdnDe2_77269 | 1 | 1 | 351 | 367 | uv|KC702209.1:1-2022 | 982 | 966 | Weak | Weak | Suspect[368,372]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.301075269 |
| CLCdnDe3_29533 | 1 | 1 | 341 | 357 | uv|DQ317600.1:97-231 | 101 | 85 | Weak | Weak | Suspect[358,372]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 6 | 4.301075269 |
| CLCdnDe3_131330 | 1 | 1 | 356 | 372 | uv|JX069761.1:9887-9905-49 | 33 | 49 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum lycopersicum cultivar I-3 chromosome 2 | 4.301075269 |
| CLCdnDe10_36465 | 1 | 1 | 336 | 352 | uv|JX025642.1:5090-5607 | 157 | 173 | Weak | Weak | Suspect[353,372]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.301075269 |
| CLCdnDe11_60401 | 1 | 1 | 9 | 25 | uv|Z29589.1:3211-4486 | 132 | 116 | Weak | Weak | Suspect[1,8]; | TRUE_BIOLOGICAL | 4527 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.301075269 |
| VdnDe3_133090 | 1 | 1 | 354 | 370 | uv|KY031737.1:1-5023 | 1289 | 1305 | Weak | Weak | Suspect[371,372]; | TRUE_BIOLOGICAL | 82115 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 4.301075269 |
| TDe_comp583731_c0_seq1 | 1 | 1 | 333 | 348 | uv|U89960.1:4738-7717 | 2678 | 2663 | Weak | Weak | Suspect[349,349]; | TRUE_BIOLOGICAL | 4892 | 1 | Solanum pennellii chromosome ch12, complete genome | 4.297994269 |
| CLCdnDe11_28559 | 1 | 1 | 2 | 17 | uv|JF909482.1:3850-8059 | 3575 | 3590 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum ubiquitin-60S ribosomal protein L40 (LOC102595592), mRNA | 4.297994269 |
| CLCdnDe13_138213 | 1 | 1 | 11 | 26 | uv|M36415.1:871-998 | 60 | 45 | Weak | Weak | Suspect[1,10]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum putative F-box protein PP2-B12 (LOC102591767), mRNA | 4.297994269 |
| CLCdnDe2_83427 | 1 | 1 | 312 | 327 | uv|M77169.1:820-5161 | 2533 | 2548 | Weak | Weak | Suspect[328,349]; | TRUE_BIOLOGICAL | 1485 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.297994269 |
| CLCdnDe7_136489 | 1 | 1 | 24 | 39 | uv|JN874480.1:1050-2714 | 353 | 368 | Weak | Weak | Suspect[1,23]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102580825 (LOC102580825), mRNA | 4.297994269 |
| TDe_comp104541_c0_seq2 | 1 | 1 | 4 | 19 | uv|JF837313.1:2537-3122 | 529 | 514 | Weak | Weak | Suspect[1,3]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 4 | 4.297994269 |
| TDe_comp114005_c1_seq10 | 1 | 1 | 16 | 31 | uv|JF909482.1:3850-8059 | 1487 | 1502 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Nicotiana tomentosiformis putative late blight resistance protein homolog R1A-3 (LOC104102118), transcript variant X13, mRNA | 4.297994269 |
| VdnDe1_242158 | 1 | 1 | 21 | 36 | uv|KC702188.1:1-274 | 145 | 160 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102580752 (LOC102580752), ncRNA | 4.297994269 |
| VdnDe2_205809 | 1 | 1 | 331 | 346 | uv|U13864.1:2748-4229-44 | 120 | 135 | Weak | Weak | Suspect[347,349]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum tuberosum DELLA protein GAI-like (LOC102604625), transcript variant X2, mRNA | 4.297994269 |
| VdnDe5_78339 | 1 | 1 | 17 | 32 | uv|KM407512.1:886-4985 | 2451 | 2436 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum pennellii chromosome ch05, complete genome | 4.297994269 |
| CLCdnDe6_103535 | 1 | 1 | 340 | 356 | uv|KU936038.1:1013-1097 | 1 | 17 | Weak | Weak | Suspect[357,373]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch07, complete genome | 4.289544236 |
| TDe_comp17898_c0_seq1 | 1 | 1 | 341 | 357 | uv|KC702216.1:1-1022 | 55 | 39 | Weak | Weak | Suspect[359,373]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.289544236 |
| TDe_comp17898_c0_seq1 | 1 | 1 | 342 | 358 | uv|FJ750577.1:368-2560 | 475 | 491 | Weak | Weak | Suspect[359,373]; | TRUE_BIOLOGICAL | 4447 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.289544236 |
| CLCdnDe10_134213 | 1 | 1 | 327 | 342 | uv|EF216318.1:1961-4116 | 1128 | 1113 | Weak | Weak | Suspect[343,350]; | NO_DATA | 1 | 1 | PREDICTED: Frankliniella occidentalis probable cytochrome P450 6a14 (LOC113203598), mRNA | 4.285714286 |
| CLCdnDe13_128157 | 1 | 1 | 313 | 328 | uv|J02459.1:1-48502-49 | 34072 | 34057 | Weak | Weak | Suspect[329,350]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch05, complete genome | 4.285714286 |
| CLCdnDe3_42743 | 1 | 1 | 7 | 22 | uv|KC702209.1:1-2022 | 738 | 753 | Weak | Weak | Suspect[1,6]; | TRUE_BIOLOGICAL | 196118 | 1 | 4.285714286 | |
| TDe_comp64487_c0_seq1 | 1 | 1 | 14 | 29 | uv|J02459.1:1-48502-49 | 23972 | 23957 | Weak | Weak | Suspect[1,13]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.285714286 |
| VdnDe3_194617 | 1 | 1 | 333 | 348 | uv|DQ883689.3:1-1994 | 492 | 507 | Weak | Weak | Suspect[349,350]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum polyadenylate-binding protein-interacting protein 4-like (LOC102592714), transcript variant X2, mRNA | 4.285714286 |
| CLCdnDe11_72189 | 1 | 1 | 313 | 328 | uv|EU496100.1:270-2269 | 267 | 282 | Weak | Weak | Suspect[329,350]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.285714286 |
| CLCdnDe11_72189 | 1 | 1 | 308 | 323 | uv|KC702231.1:1-1021 | 954 | 969 | None | Weak | Suspect[329,350]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.285714286 |
| CLCdnDe11_134893 | 1 | 1 | 8 | 23 | uv|JF909482.1:3850-8059 | 2707 | 2692 | Weak | Weak | Suspect[1,7]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102603674 (LOC102603674), mRNA | 4.285714286 |
| CLCdnDe12_22664 | 1 | 1 | 6 | 21 | uv|KC702237.1:1-1024 | 488 | 503 | Weak | Weak | Suspect[1,5]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Solanum tuberosum ubiquitin-related modifier 1 homolog 1 (LOC102598667), mRNA | 4.285714286 |
| CLCdnDe3_138416 | 1 | 1 | 327 | 342 | uv|EF216318.1:1961-4116 | 1128 | 1113 | Weak | Weak | Suspect[343,350]; | NO_DATA | 1 | 1 | PREDICTED: Frankliniella occidentalis probable cytochrome P450 6a14 (LOC113203598), mRNA | 4.285714286 |
| TDe_comp105566_c1_seq9 | 1 | 1 | 316 | 331 | uv|KF718979.1:2206-6730 | 4322 | 4337 | Weak | Weak | Suspect[332,350]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum peptidyl-prolyl cis-trans isomerase CYP59-like (LOC102583150), mRNA | 4.285714286 |
| VdnDe2_169871 | 1 | 1 | 17 | 32 | uv|JF909482.1:3850-8059 | 324 | 309 | Weak | Weak | Suspect[1,16]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102581666 (LOC102581666), mRNA | 4.285714286 |
| VdnDe5_84008 | 1 | 1 | 13 | 28 | uv|AF310136.1:4127-5198 | 359 | 344 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum lycopersicum cultivar I-3 chromosome 6 | 4.285714286 |
| VdnDe6_28001 | 1 | 1 | 317 | 332 | uv|U13843.1:1887-9923 | 2354 | 2339 | Weak | Weak | Suspect[333,350]; | TRUE_BIOLOGICAL | 325454 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.285714286 |
| VdnDe6_87505 | 1 | 1 | 319 | 334 | uv|Z46234.1:4844-5692 | 754 | 769 | Weak | Weak | Suspect[335,350]; | TRUE_BIOLOGICAL | 460517 | 1 | PREDICTED: Solanum tuberosum salicylic acid-binding protein 2-like (LOC102579741), mRNA | 4.285714286 |
| CLCdnDe12_32896 | 1 | 1 | 15 | 32 | uv|KC702208.1:1-1350 | 26 | 9 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102591881 (LOC102591881), ncRNA | 4.282115869 |
| CLCdnDe7_85205 | 1 | 1 | 378 | 395 | uv|M34298.1:3143-4604 | 898 | 881 | Weak | Weak | Suspect[396,397]; | TRUE_BIOLOGICAL | 6237 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.282115869 |
| VdnDe2_226184 | 1 | 1 | 371 | 388 | uv|JF909482.1:3850-8059 | 3262 | 3245 | Weak | Weak | Suspect[389,397]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.282115869 |
| CLCdnDe11_57994 | 1 | 1 | 358 | 374 | uv|JX069764.1:9741-9848-49 | 115 | 131 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | Solanum tuberosum type I serine protease inhibitor (PIN1A), mRNA<>Solanum tuberosum type I serine protease inhibitor (Pin1A) mRNA, complete cds | 4.278074866 |
| CLCdnDe13_91905 | 1 | 1 | 4 | 20 | uv|KM407506.1:2354-4632 | 457 | 473 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 8 | 4.278074866 |
| CLCdnDe14_111576 | 1 | 1 | 15 | 31 | uv|L08953.1:1438-1533 | 63 | 47 | Weak | Weak | Suspect[1,14]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum pennellii chromosome ch05, complete genome | 4.278074866 |
| CLCdnDe9_127421 | 1 | 1 | 11 | 27 | uv|HM640258.1:317-2913 | 1643 | 1659 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 5073 | 1 | 4.278074866 | |
| CLCdnDe13_172208 | 1 | 1 | 358 | 374 | uv|NGB00380.1:1-26 | 4 | 20 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus uncharacterized LOC101209389 (LOC101209389), mRNA | 4.278074866 |
| CLCdnDe6_177198 | 1 | 1 | 358 | 374 | uv|NGB00380.1:1-26 | 4 | 20 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus uncharacterized LOC101209389 (LOC101209389), mRNA | 4.278074866 |
| VdnDe6_84531 | 1 | 1 | 20 | 36 | uv|KF853602.1:1019-2932 | 1686 | 1670 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 7711 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107058455 (LOC107058455), transcript variant X8, misc_RNA | 4.278074866 |
| CLCdnDe10_82032 | 1 | 1 | 16 | 31 | uv|KF719005.1:2205-5132 | 1545 | 1530 | Weak | Weak | Suspect[1,15]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum meiotic nuclear division protein 1 homolog (LOC102581886), transcript variant X3, misc_RNA | 4.273504274 |
| CLCdnDe10_125766 | 1 | 1 | 18 | 33 | uv|KF719005.1:2205-5132 | 1763 | 1748 | Weak | Weak | Suspect[1,17]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum pennellii chromosome ch02, complete genome | 4.273504274 |
| CLCdnDe11_119738 | 1 | 1 | 21 | 36 | uv|HQ245711.1:13692-16404 | 1060 | 1045 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 620 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.273504274 |
| CLCdnDe12_138976 | 1 | 1 | 13 | 28 | uv|X13003.1:2753-4028 | 773 | 758 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 561 | 1 | Solanum tuberosum strain P6/210 contig r1, complete sequence | 4.273504274 |
| CLCdnDe13_21935 | 1 | 1 | 12 | 27 | uv|JN204905.1:1-455 | 249 | 234 | Weak | Weak | Suspect[1,11]; | NO_DATA | 1 | 1 | PREDICTED: Solanum lycopersicum aminomethyltransferase, mitochondrial (LOC101249137), transcript variant X1, mRNA | 4.273504274 |
| TDe_comp17967_c0_seq2 | 1 | 1 | 334 | 349 | uv|M98046.1:2386-3803 | 140 | 155 | Weak | Weak | Suspect[350,351]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.273504274 |
| CLCdnDe11_55990 | 1 | 1 | 7 | 22 | uv|JF909455.1:2712-2846 | 56 | 41 | Weak | Weak | Suspect[1,6]; | NO_DATA | 1 | 1 | 4.273504274 | |
| CLCdnDe14_162234 | 1 | 1 | 4 | 19 | uv|U55760.1:1-2749 | 2054 | 2069 | Weak | Weak | Suspect[1,3]; | TRUE_BIOLOGICAL | 558016 | 1 | Solanum tuberosum clone PI6570 Kunitz-type inhibitor D (KTI-D) mRNA, partial cds | 4.273504274 |
| CLCdnDe5_121782 | 1 | 1 | 333 | 348 | uv|JX992843.1:12803-12899 | 59 | 44 | Weak | Weak | Suspect[349,351]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum MADS-box transcription factor 23-like (LOC102582884), transcript variant X3, mRNA | 4.273504274 |
| CLCdnDe5_141983 | 1 | 1 | 13 | 28 | uv|X13003.1:2753-4028 | 773 | 758 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 561 | 1 | Solanum tuberosum strain P6/210 contig r1, complete sequence | 4.273504274 |
| CLCdnDe5_152983 | 1 | 1 | 333 | 348 | uv|U67875.1:6835-8216 | 435 | 420 | Weak | Weak | Suspect[349,351]; | TRUE_BIOLOGICAL | 4895 | 1 | PREDICTED: Solanum tuberosum pentatricopeptide repeat-containing protein At3g22150, chloroplastic-like (LOC102578445), transcript variant X1, mRNA | 4.273504274 |
| TDe_comp107936_c2_seq53 | 1 | 1 | 313 | 328 | uv|KC702204.1:1-521 | 454 | 469 | Weak | Weak | Suspect[329,351]; | TRUE_BIOLOGICAL | 196118 | 1 | 4.273504274 | |
| VdnDe2_91288 | 1 | 1 | 335 | 350 | uv|J02459.1:1-48502-49 | 32692 | 32707 | Weak | Weak | Suspect[351,351]; | TRUE_BIOLOGICAL | 10699 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102588364 (LOC102588364), transcript variant X2, mRNA | 4.273504274 |
| VdnDe5_8102 | 1 | 1 | 11 | 26 | uv|KC702194.1:1-1023 | 740 | 755 | Weak | Weak | Suspect[1,10];Suspect[350,351]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum tuberosum zeaxanthin epoxidase (ZEP) gene, ZEP-1 allele, complete cds; and LINE-1-like retrotransposon, complete sequence | 4.273504274 |
| VdnDe6_68094 | 1 | 1 | 318 | 333 | uv|U13843.1:1887-9923 | 2354 | 2339 | Weak | Weak | Suspect[334,351]; | TRUE_BIOLOGICAL | 325454 | 1 | Solanum pennellii chromosome ch10, complete genome | 4.273504274 |
| CLCdnDe13_63590 | 1 | 1 | 11 | 28 | uv|M59367.1:2548-2643 | 78 | 61 | Weak | Weak | Suspect[1,10]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch03, complete genome | 4.271356784 |
| CLCdnDe13_6444 | 1 | 1 | 20 | 36 | uv|U03463.1:8267-8360 | 77 | 61 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 620 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107061263 (LOC107061263), mRNA | 4.266666667 |
| CLCdnDe2_23305 | 1 | 1 | 25 | 41 | uv|KC702205.1:1-1107 | 969 | 985 | Weak | Weak | Suspect[1,24]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum lycopersicum protein disulfide isomerase-like 1-6 (LOC101262499), mRNA | 4.266666667 |
| CLCdnDe2_132395 | 1 | 1 | 11 | 27 | uv|HM640258.1:317-2913 | 1643 | 1659 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 5073 | 1 | 4.266666667 | |
| CLCdnDe4_25050 | 1 | 1 | 21 | 37 | uv|AF234306.1:11160-11226-49 | 72 | 56 | Weak | Weak | Suspect[1,20]; | NO_DATA | 1 | 1 | Solanum tuberosum chromosome 7 clone RHPOTKEY169K08, complete sequence | 4.266666667 |
| VdnDe4_160186 | 1 | 1 | 339 | 355 | uv|JN874480.1:1050-2714 | 1267 | 1283 | Weak | Weak | Suspect[356,375]; | TRUE_BIOLOGICAL | 3701 | 1 | Solanum lycopersicum cultivar I-3 chromosome 9 | 4.266666667 |
| CLCdnDe10_99128 | 1 | 1 | 14 | 29 | uv|KC702185.1:1-522 | 403 | 418 | Weak | Weak | Suspect[1,13]; | TRUE_BIOLOGICAL | 196118 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.261363636 |
| CLCdnDe11_131671 | 1 | 1 | 335 | 350 | uv|NGB01022.1:1-78 | 30 | 45 | Weak | Weak | Suspect[351,352]; | NO_DATA | 1 | 1 | 4.261363636 | |
| CLCdnDe13_86008 | 1 | 1 | 23 | 38 | uv|NGB00034.1:2015-2210 | 134 | 149 | Weak | Weak | Suspect[1,22]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC107058560 (LOC107058560), transcript variant X6, ncRNA | 4.261363636 |
| CLCdnDe2_23428 | 1 | 1 | 316 | 331 | uv|NGB00620.1:1102-1287 | 64 | 49 | Weak | Weak | Suspect[332,352]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.261363636 |
| CLCdnDe3_39522 | 1 | 1 | 11 | 26 | uv|AF058756.1:5533-5628 | 16 | 1 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 151341 | 1 | Solanum pennellii chromosome ch02, complete genome | 4.261363636 |
| CLCdnDe6_96973 | 1 | 1 | 1 | 16 | uv|U02430.1:90-146 | 24 | 9 | Weak | Weak | None | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.261363636 |
| CLCdnDe10_22509 | 1 | 1 | 4 | 19 | uv|M97937.1:846-1007 | 63 | 78 | Weak | Weak | Suspect[1,3]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum probable acyl-activating enzyme 18, peroxisomal (LOC102600032), mRNA | 4.261363636 |
| CLCdnDe11_136211 | 1 | 1 | 5 | 20 | uv|KY031726.1:1-7905 | 4594 | 4579 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 82115 | 1 | Solanum pennellii chromosome ch11, complete genome | 4.261363636 |
| CLCdnDe11_160917 | 1 | 1 | 13 | 28 | uv|KC702187.1:1-1023 | 506 | 521 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 196118 | 1 | 4.261363636 | |
| CLCdnDe14_49166 | 1 | 1 | 11 | 26 | uv|V00604.2:1-6407-49 | 4938 | 4953 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 10861 | 1 | PREDICTED: Solanum tuberosum replication protein A 70 kDa DNA-binding subunit B-like (LOC102599322), transcript variant X14, misc_RNA | 4.261363636 |
| CLCdnDe3_21016 | 1 | 1 | 324 | 339 | uv|KC702208.1:1-1350 | 1136 | 1151 | Weak | Weak | Suspect[340,352]; | TRUE_BIOLOGICAL | 1386 | 1 | PREDICTED: Solanum tuberosum putative uncharacterized protein At4g01020, chloroplastic (LOC102585171), mRNA | 4.261363636 |
| CLCdnDe3_39800 | 1 | 1 | 328 | 343 | uv|U09128.1:3334-10218 | 4899 | 4884 | Weak | Weak | Suspect[344,352]; | TRUE_BIOLOGICAL | 91347 | 1 | Solanum tuberosum chromosome 11 clone RH073I03, complete sequence | 4.261363636 |
| CLCdnDe6_171069 | 1 | 1 | 20 | 35 | uv|U67875.1:6835-8216 | 558 | 543 | Weak | Weak | Suspect[1,19]; | TRUE_BIOLOGICAL | 4895 | 1 | PREDICTED: Solanum tuberosum transcription factor MYC2-like (LOC102588761), mRNA | 4.261363636 |
| CLCdnDe7_174911 | 1 | 1 | 317 | 332 | uv|KF718979.1:2206-6730 | 907 | 922 | Weak | Weak | Suspect[333,352]; | TRUE_BIOLOGICAL | 3701 | 1 | 4.261363636 | |
| TDe_comp106297_c0_seq6 | 1 | 1 | 333 | 348 | uv|FJ931533.1:7978-12753-49 | 4058 | 4043 | Weak | Weak | Suspect[349,352]; | TRUE_BIOLOGICAL | 7215 | 1 | 4.261363636 | |
| VdnDe1_57025 | 1 | 1 | 322 | 337 | uv|JQ927446.1:4885-6835-49 | 385 | 400 | Weak | Weak | Suspect[338,352]; | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum cytochrome P450 71A25-like (LOC107061941), mRNA | 4.261363636 |
| CLCdnDe10_129935 | 1 | 1 | 5 | 22 | uv|KC702187.1:1-1023 | 63 | 46 | Weak | Weak | Suspect[1,4]; | TRUE_BIOLOGICAL | 196118 | 1 | PREDICTED: Leptinotarsa decemlineata troponin I (LOC111515304), transcript variant X14, mRNA | 4.260651629 |
| VdnDe3_104716 | 1 | 1 | 578 | 604 | uv|NGB00276.1:1-56 | 56 | 30 | Moderate | Moderate | Suspect[605,611]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum uncharacterized LOC102590916 (LOC102590916), mRNA | 4.255319149 |
| VdnDe3_104717 | 1 | 1 | 578 | 604 | uv|NGB00276.1:1-56 | 56 | 30 | Moderate | Moderate | Suspect[605,611]; | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Solanum tuberosum uncharacterized LOC102590916 (LOC102590916), mRNA | 4.255319149 |
| CLCdnDe11_120356 | 1 | 1 | 25 | 41 | uv|U03443.1:324-421 | 24 | 40 | Weak | Weak | Suspect[1,24]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 10 | 4.255319149 |
| CLCdnDe13_119951 | 1 | 1 | 18 | 34 | uv|U02436.1:3152-4436 | 648 | 664 | Weak | Weak | Suspect[1,17]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 4.255319149 |
| CLCdnDe14_136301 | 1 | 1 | 1 | 17 | uv|JX069764.1:9741-9848-49 | 132 | 116 | Weak | Weak | None | TRUE_ARTIFICIAL | 81077 | 81077 | 4.255319149 | |
| CLCdnDe6_121268 | 1 | 1 | 18 | 34 | uv|U02436.1:3152-4436 | 648 | 664 | Weak | Weak | Suspect[1,17]; | TRUE_BIOLOGICAL | 4930 | 1 | Solanum lycopersicum cultivar I-3 chromosome 3 | 4.255319149 |
| TDe_comp107288_c0_seq4 | 1 | 1 | 2 | 18 | uv|J02400.1:1-5243-49 | 4994 | 5010 | Weak | Weak | Suspect[1,1]; | TRUE_BIOLOGICAL | 151341 | 1 | PREDICTED: Solanum tuberosum basic leucine zipper 34-like (LOC102600483), mRNA | 4.255319149 |
| CLCdnDe11_157567 | 1 | 1 | 473 | 494 | uv|JX069761.1:1-102 | 66 | 87 | Moderate | Moderate | None | TRUE_ARTIFICIAL | 81077 | 81077 | PREDICTED: Cucumis sativus phosphoethanolamine N-methyltransferase-like (LOC101220267), mRNA | 4.251012146 |
| CLCdnDe10_97728 | 1 | 1 | 322 | 337 | uv|JN204883.1:1-1492 | 932 | 917 | Weak | Weak | Suspect[338,353]; | NO_DATA | 1 | 1 | Solanum lycopersicum cultivar I-3 chromosome 7 | 4.249291785 |
| CLCdnDe10_115684 | 1 | 1 | 322 | 337 | uv|U13843.1:1887-9923 | 4424 | 4439 | Weak | Weak | Suspect[338,353]; | TRUE_BIOLOGICAL | 325454 | 1 | PREDICTED: Nicotiana tabacum uncharacterized LOC107789768 (LOC107789768), transcript variant X3, misc_RNA | 4.249291785 |
| CLCdnDe10_122868 | 1 | 1 | 316 | 331 | uv|U09128.1:12430-14537 | 1247 | 1262 | Weak | Weak | Suspect[332,353]; | TRUE_BIOLOGICAL | 91347 | 1 | PREDICTED: Solanum tuberosum uncharacterized LOC102601205 (LOC102601205), transcript variant X5, ncRNA | 4.249291785 |
| CLCdnDe11_85377 | 1 | 1 | 331 | 346 | uv|JX025642.1:7290-7461 | 73 | 88 | Weak | Weak | Suspect[347,353]; | NO_DATA | 1 | 1 | Solanum pennellii chromosome ch04, complete genome | 4.249291785 |
| CLCdnDe2_115022 | 1 | 1 | 1 | 16 | uv|JQ394799.1:1-1559 | 1474 | 1489 | Weak | Weak | None | NO_DATA | 1 | 1 | PREDICTED: Solanum tuberosum (R)-mandelonitrile lyase-like (LOC102580581), mRNA | 4.249291785 |
| CLCdnDe2_115358 | 1 | 1 | 3 | 18 | uv|J02459.1:1-48502-49 | 26948 | 26963 | Weak | Weak | Suspect[1,2]; | TRUE_BIOLOGICAL | 10699 | 1 | 4.249291785 | |
| CLCdnDe7_153932 | 1 | 1 | 11 | 26 | uv|M16192.1:1-2517-49 | 850 | 865 | Weak | Weak | Suspect[1,10]; | TRUE_BIOLOGICAL | 1279 | 1 | PREDICTED: Solanum pennellii trihelix transcription factor ASIL2 (LOC107005844), mRNA | 4.249291785 |
| CLCdnDe9_103410 | 1 | 1 | 13 | 28 | uv|V00604.2:1-6407-49 | 4132 | 4147 | Weak | Weak | Suspect[1,12]; | TRUE_BIOLOGICAL | 10861 | 1 | 4.249291785 | |
| VdnDe3_146326 | 1 | 1 | 321 | 336 | uv|AF379854.1:4263-5841 | 608 | 593 | Weak | Weak | Suspect[337,353]; | TRUE_BIOLOGICAL | 5820 | 1 | Solanum lycopersicum cultivar I-3 chromosome 1 | 4.249291785 |
| CLCdnDe12_82545 | 1 | 1 | 3 | 18 | uv|U55760.1:1-2749 | 1340 | 1325 | Weak | Weak | Suspect[1,2]; | TRUE_BIOLOGICAL | 558016 | 1 | 4.249291785 | |
| CLCdnDe3_48077 | 1 | 1 | 334 | 349 | uv|JN874480.1:6795-9434 | 2508 | 2523 | Weak | Weak | Suspect[350,353]; | TRUE_BIOLOGICAL | 40674 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.249291785 |
| CLCdnDe7_145033 | 1 | 1 | 323 | 338 | uv|DQ649431.1:3092-4131-49 | 455 | 440 | Weak | Weak | Suspect[339,353]; | TRUE_BIOLOGICAL | 10358 | 1 | PREDICTED: Solanum pennellii uncharacterized LOC107025934 (LOC107025934), transcript variant X7, misc_RNA | 4.249291785 |
| VdnDe1_268717 | 1 | 1 | 329 | 344 | uv|GU593055.1:4102-4364 | 184 | 199 | Weak | Weak | Suspect[345,353]; | NO_DATA | 1 | 1 | Solanum tuberosum acidic endochitinase pcht28 (LOC102577835), mRNA<>Solanum tuberosum class II chitinase (ChtA2) mRNA, complete cds | 4.249291785 |
| VdnDe1_268718 | 1 | 1 | 10 | 25 | uv|GU593055.1:4102-4364 | 199 | 184 | Weak | Weak | Suspect[1,9]; | NO_DATA | 1 | 1 | Solanum tuberosum acidic endochitinase pcht28 (LOC102577835), mRNA<>Solanum tuberosum class II chitinase (ChtA2) mRNA, complete cds | 4.249291785 |
| VdnDe1_311776 | 1 | 1 | 334 | 349 | uv|KF718979.1:2206-6730 | 4420 | 4405 | Weak | Weak | Suspect[350,353]; | TRUE_BIOLOGICAL | 3701 | 1 | PREDICTED: Solanum tuberosum probable glutathione S-transferase (LOC102602051), mRNA | 4.249291785 |
| VdnDe2_194613 | 1 | 1 | 21 | 36 | uv|J02459.1:1-48502-49 | 25067 | 25082 | Weak | Weak | Suspect[1,20]; | TRUE_BIOLOGICAL | 10699 | 1 | Solanum pennellii chromosome ch06, complete genome | 4.249291785 |
| CLCdnDe9_425 | 1 | 1 | 3 | 19 | uv|M35007.1:1327-1473 | 129 | 113 | Weak | Weak | Suspect[1,2]; | NO_DATA | 1 | 1 | Solanum tuberosum subtilisin-like serine protease gene, partial cds | 4.24403183 |
