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| vsiRNA ID | Target | Interaction properties | ||||||||||||
| ID | Representative ID | Short name | Full description | MapMan ontology | Degradome Category | Degradome p-value | T_Start | T_Stop | T_Slice | MFE_perfect | MFE_site | MFE_ratio | Mismatches | |
| vsiRNA5 | Sotub09g009450 | Sotub09g009450 | AGD6 | ADP-ribosylation factor GTPase activating protein 1 | 27.3.99 RNA.regulation of transcription.unclassified | 29.4 protein.postranslational modification | 30.5 signalling.G-proteins | 2 | 0.309964804202984 | 511 | 535 | 522 | -30 | -19.88 | 0.6626666666666671 | 1 |
| vsiRNA13 | Sotub06g009110 | Sotub06g009110 | PIP1-1 | Aquaporin-like protein | 34.19.1 transport.major intrinsic proteins.PIP | 2 | 0.313785541550617 | 716 | 741 | 732 | -37.7 | -24.8 | 0.657824933687003 | 2 |
| vsiRNA20 | Sotub07g020880 | Sotub07g020880 | ATXR3 | Histone-lysine N-methyltransferase | 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family | 1 | 0.00669868914361305 | 3141 | 3162 | 3153 | -37.1 | -25.58 | 0.6894878706199461 | 3 |
| vsiRNA26 | Sotub07g022690 | Sotub07g022690 | CYP72A10 | Cytochrome P450 | 2.2.2.6 major CHO metabolism.degradation.starch.transporter | 17.3.1.1.5 hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation | 26.10 misc.cytochrome P450 | 1 | 0.0240934536639266 | 842 | 863 | 854 | -37.4 | -24.4 | 0.6524064171122991 | 3 |
| vsiRNA41 | Sotub02g032940 | Sotub02g032940 | PSBO1 | Oxygen-evolving enhancer protein 1 of photosystem II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.0261202645775129 | 291 | 313 | 304 | -35.8 | -26.6 | 0.743016759776536 | 1 |
| vsiRNA44 | Sotub04g032230 | Sotub04g032230 | F17M5.140 | Peptidyl-prolyl cis-trans isomerase cyclophilin-type | 35.2 not assigned.unknown | 0 | 0.0215105024888224 | 210 | 230 | 221 | -31.2 | -21.8 | 0.698717948717949 | 3 |
| vsiRNA48 | Sotub05g022860 | Sotub05g022860 | Sotub05g022860.1.1 | ATP synthase subunit delta | 1.1.4.7 PS.lightreaction.ATP synthase.delta chain | 2 | 0.0816793454613802 | 137 | 165 | 151 | -29.9 | -21.2 | 0.709030100334448 | 0 |
| vsiRNA49 | Sotub01g024100 | Sotub01g024100 | ADG2 | Glucose-1-phosphate adenylyltransferase | 2.1.2.1 major CHO metabolism.synthesis.starch.AGPase | 2 | 0.420818315663857 | 429 | 448 | 439 | -33.8 | -22.1 | 0.6538461538461541 | 3 |
| vsiRNA67 | Sotub02g036590 | Sotub02g036590 | GLCAK1 | GHMP kinase family protein | 10.1.30.3 cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase | 29.4.1 protein.postranslational modification.kinase | 0 | 0.0218188231019292 | 658 | 681 | 672 | -34.7 | -25.22 | 0.726801152737752 | 3 |
| vsiRNA67 | Sotub12g018210 | Sotub12g018210 | F27J15.9 | NADH-ubiquinone oxidoreductase subunit | 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH (type I).localisation not clear | 10.1.5 cell wall.precursor synthesis.UXS | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 2 | 0.118219517186191 | 3 | 29 | 20 | -34.7 | -26 | 0.7492795389048991 | 1 |
| vsiRNA67 | Sotub02g011470 | Sotub02g011470 | CKA1 | Protein serine/threonine kinase | 29.4 protein.postranslational modification | 2 | 0.7821704733317291 | 811 | 831 | 822 | -34.7 | -22.6 | 0.6512968299711821 | 3 |
| vsiRNA81 | Sotub07g027450 | Sotub07g027450 | PSBR | photosystem II polypeptide | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 2 | 0.194725440241409 | 109 | 130 | 121 | -34.4 | -22.6 | 0.656976744186047 | 3 |
| vsiRNA93 | Sotub06g020670 | Sotub06g020670 | AKHSDH1 | Bifunctional aspartokinase/homoserine dehydrogenase I | 13.1.3.6.1.1 amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase | 13.1.3.6.1.10 amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase | 2 | 0.0417095145319349 | 2669 | 2690 | 2681 | -34.8 | -24.6 | 0.706896551724138 | 2 |
| vsiRNA99 | Sotub01g048700 | Sotub01g048700 | Sotub01g048700.1.1 | Cold shock protein-1 | 20.2.2 stress.abiotic.cold | 27.3.75 RNA.regulation of transcription.GRP | 30.2.11 signalling.receptor kinases.leucine rich repeat XI | 30.2.12 signalling.receptor kinases.leucine rich repeat XII | 0 | 0.0150132733289049 | 168 | 191 | 180 | -36.9 | -24 | 0.6504065040650411 | 1 |
| vsiRNA102 | Sotub07g025580 | Sotub07g025580 | ACD6 | Ankyrin repeat protein family-like protein | 19.4 tetrapyrrole synthesis.ALA dehydratase | 31.1 cell.organisation | 2 | 0.261469502921376 | 515 | 536 | 527 | -37.8 | -25.3 | 0.6693121693121691 | 1 |
| vsiRNA102 | PGSC0003DMC400066669 | PGSC0003DMG400044565 | PGSC0003DMG400044565 | Gene of unknown function | 20.1.5 stress.biotic.regulation of transcription | 31.1 cell.organisation | 3 | 0.0389233132098663 | 419 | 440 | 431 | -37.8 | -25.5 | 0.6746031746031751 | 3 |
| vsiRNA106 | PGSC0003DMC400054865 | PGSC0003DMG400031524 | PGSC0003DMG400031524 | Glycine-rich protein | 35.2 not assigned.unknown | 0 | 0.010220453391670499 | 142 | 167 | 154 | -36.6 | -26.3 | 0.7185792349726781 | 0 |
| vsiRNA113 | STMII45TV | STMII45TV | STMII45TV | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 1 | 0.07851975660845979 | 502 | 520 | 511 | -35.2 | -23 | 0.653409090909091 | 3 |
| vsiRNA118 | Sotub12g023780 | Sotub12g023780 | Sotub12g023780.1.1 | Pectinesterase/pectinesterase inhibitor 3 | 26.18 misc.invertase/pectin methylesterase inhibitor family protein | 2 | 0.116290619741876 | 290 | 308 | 299 | -30.1 | -20.9 | 0.6943521594684381 | 3 |
| vsiRNA118 | AM908115 | AM908115 | AM908115 | NA | 35.2 not assigned.unknown | 3 | 0.0594242704970442 | 18 | 44 | 28 | -30.1 | -20.7 | 0.687707641196013 | 1 |
| vsiRNA124 | Sotub07g026130 | Sotub07g026130 | UBQ10 | Polyubiquitin | 29.2.1.1.3 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar | 29.2.2 protein.synthesis.ribosome biogenesis | 29.5.11.1 protein.degradation.ubiquitin.ubiquitin | 2 | 0.31848630734369904 | 462 | 479 | 473 | -31.1 | -20.4 | 0.655948553054662 | 3 |
| vsiRNA127 | Sotub06g020670 | Sotub06g020670 | AKHSDH1 | Bifunctional aspartokinase/homoserine dehydrogenase I | 13.1.3.6.1.1 amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase | 13.1.3.6.1.10 amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase | 2 | 0.152821002081641 | 2462 | 2489 | 2480 | -40.1 | -26.8 | 0.6683291770573571 | 2 |
| vsiRNA135 | Sotub01g026570 | Sotub01g026570 | SAP5 | Zinc finger A20 and AN1 domain-containing stress-associated protein 6 | 27.3.99 RNA.regulation of transcription.unclassified | 2 | 0.113711054242251 | 289 | 309 | 301 | -32.5 | -21.9 | 0.6738461538461541 | 3 |
| vsiRNA139 | Sotub06g029890 | Sotub06g029890 | VAMP714 | Vesicle-associated membrane protein 7C | 31.4 cell.vesicle transport | 2 | 0.24438096170039303 | 177 | 199 | 190 | -35.5 | -23.1 | 0.650704225352113 | 2 |
| vsiRNA141 | Sotub11g013980 | Sotub11g013980 | FAB1A | Phosphatidylinositol-4-phosphate 5-kinase family protein | 30.4.1 signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase | 2 | 0.025405996422027798 | 3586 | 3606 | 3597 | -34.6 | -26.7 | 0.771676300578035 | 1 |
| vsiRNA145 | Sotub12g032410 | Sotub12g032410 | T24H18_120 | Acetyl-CoA carboxylase-like protein | 3.5 minor CHO metabolism.others | 29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V | 2 | 0.232411777853457 | 216 | 235 | 226 | -32.3 | -21.8 | 0.6749226006191951 | 2 |
| vsiRNA147 | Sotub09g024030 | Sotub09g024030 | OASA1 | Cysteine synthase | 13.1.5.3.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL | 30.4 signalling.phosphinositides | 2 | 0.130849725441212 | 65 | 85 | 76 | -30.7 | -20.4 | 0.6644951140065151 | 3 |
| vsiRNA151 | Sotub08g028270 | Sotub08g028270 | Sotub08g028270.1.1 | Methanol inducible protein | 3.4.1 minor CHO metabolism.myo-inositol.poly-phosphatases | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 2 | 0.0670492087652441 | 541 | 565 | 555 | -38.6 | -25.9 | 0.670984455958549 | 0 |
| vsiRNA160 | Sotub03g034950 | Sotub03g034950 | DRG1 | Developmentally-regulated GTP-binding protein 2 | 1.3.13 PS.calvin cycle.rubisco interacting | 29.2.2 protein.synthesis.ribosome biogenesis | 30.5 signalling.G-proteins | 34.5 transport.ammonium | 2 | 0.665506385180553 | 859 | 884 | 875 | -32.9 | -21.6 | 0.656534954407295 | 2 |
| vsiRNA186 | Sotub02g017490 | Sotub02g017490 | F1N18.11 | Double-stranded DNA-binding protein | 21.2 redox.ascorbate and glutathione | 0 | 0.102690400207103 | 32 | 55 | 43 | -33.1 | -21.8 | 0.658610271903323 | 1 |
| vsiRNA186 | Sotub01g041670 | Sotub01g041670 | bZIP | BZIP transcription factor | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 2 | 0.07164728451466319 | 714 | 736 | 725 | -33.1 | -25.4 | 0.767371601208459 | 2 |
| vsiRNA186 | Sotub04g031070 | Sotub04g031070 | F21P24.15 | Expressed protein having alternate splicing products | 20.2.1 stress.abiotic.heat | 29.4 protein.postranslational modification | 31.1 cell.organisation | 2 | 0.36067696832351304 | 21 | 41 | 32 | -33.1 | -22.4 | 0.6767371601208461 | 2 |
| vsiRNA186 | Sotub01g029320 | Sotub01g029320 | RGGA | Nuclear RNA binding protein | 27.4 RNA.RNA binding | 3 | 0.369053223125725 | 636 | 656 | 647 | -33.1 | -21.7 | 0.655589123867069 | 3 |
| vsiRNA193 | PGSC0003DMC400059207 | PGSC0003DMG400037103 | PGSC0003DMG400037103 | Gene of unknown function | 20.2.3 stress.abiotic.drought/salt | 26.9 misc.glutathione S transferases | 27.3.99 RNA.regulation of transcription.unclassified | 29.5 protein.degradation | 3 | 0.0272709688147821 | 88 | 112 | 99 | -34.3 | -23.3 | 0.67930029154519 | 0 |
| vsiRNA210 | Sotub10g018830 | Sotub10g018830 | EOL1 | Ethylene-overproduction protein 1 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein | 1 | 0.0160108153241483 | 125 | 144 | 136 | -31.3 | -22.1 | 0.7060702875399361 | 2 |
| vsiRNA223 | PGSC0003DMC400017147 | PGSC0003DMG400009712 | NPC1 | Hydrolase, acting on ester bonds | 11.9.3.5 lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C | 1 | 0.0023402148137895403 | 1488 | 1507 | 1498 | -31.1 | -23 | 0.7395498392282961 | 2 |
| vsiRNA225 | Sotub03g031420 | Sotub03g031420 | RBOHA | Respiratory burst oxidase-like protein | 20.1.1 stress.biotic.respiratory burst | 1 | 0.028735844755221004 | 2688 | 2719 | 2709 | -36.1 | -23.5 | 0.650969529085873 | 2 |
| vsiRNA232 | Sotub03g025280 | Sotub03g025280 | Sotub03g025280.1.1 | Genomic DNA chromosome 5 TAC clone K6A12 | 13.1.6.5.2 amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase | 0 | 0.007660696358549931 | 54 | 74 | 65 | -35.4 | -25.2 | 0.711864406779661 | 2 |
| vsiRNA232 | Sotub01g006750 | Sotub01g006750 | PAP12 | PAP fibrillin family protein | 2.2.1.4 major CHO metabolism.degradation.sucrose.hexokinase | 31.1 cell.organisation | 0 | 0.0208935696859854 | 842 | 864 | 855 | -35.4 | -23.96 | 0.67683615819209 | 3 |
| vsiRNA232 | Sotub03g029380 | Sotub03g029380 | LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.2.1 PS.lightreaction.photosystem I.LHC-I | 3 | 0.0555662231841386 | 639 | 658 | 649 | -35.4 | -24.1 | 0.6807909604519781 | 1 |
| vsiRNA234 | Sotub06g014190 | Sotub06g014190 | RPL3A | 50S ribosomal protein L3 | 29.2.1.1.1.2.3 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3 | 2 | 0.141583187791421 | 420 | 441 | 432 | -31.1 | -20.5 | 0.6591639871382641 | 3 |
| vsiRNA237 | Sotub01g040480 | Sotub01g040480 | ECT11 | YTH domain family 2 (Predicted) | 30.3 signalling.calcium | 2 | 0.028188737834143898 | 1608 | 1627 | 1618 | -31 | -24.6 | 0.7935483870967741 | 1 |
| vsiRNA240 | Sotub01g031790 | Sotub01g031790 | C18G5.10 | Ulp1 peptidase-like | 1.3.4 PS.calvin cycle.GAP | 20.1 stress.biotic | 29.2.1.2.2.10 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10 | 29.2.2 protein.synthesis.ribosome biogenesis | 1 | 0.00208693461689435 | 591 | 611 | 602 | -39.1 | -29.7 | 0.7595907928388751 | 2 |
| vsiRNA250 | Sotub02g036490 | Sotub02g036490 | Sotub02g036490.1.1 | Heterogeneous nuclear ribonucleoprotein A3 | 27.4 RNA.RNA binding | 2 | 0.529929613935699 | 757 | 777 | 768 | -31.1 | -21 | 0.67524115755627 | 2 |
| vsiRNA254 | Sotub01g034950 | Sotub01g034950 | PNG1 | Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase | 29.5 protein.degradation | 0 | 0.102398311055321 | 2100 | 2126 | 2117 | -33.8 | -22.3 | 0.659763313609467 | 1 |
| vsiRNA254 | Sotub08g023430 | Sotub08g023430 | LIL3:1 | Light harvesting-like protein 3 | 27.3.23 RNA.regulation of transcription.heat-shock transcription factor family (HSF) | 2 | 0.19615367967729103 | 675 | 695 | 686 | -33.8 | -23.3 | 0.689349112426036 | 2 |
| vsiRNA254 | Sotub02g023810 | Sotub02g023810 | APR1 | Phosphoadenosine phosphosulfate reductase | 14.2 S-assimilation.APR | 3 | 0.284338985605855 | 226 | 248 | 239 | -33.8 | -22.2 | 0.656804733727811 | 1 |
| vsiRNA259 | TC218757 | TC218757 | TC218757 | NA | 35.2 not assigned.unknown | 2 | 0.0028552827145458303 | 142 | 162 | 153 | -32.9 | -34 | 1 | 0 |
| vsiRNA259 | Sotub12g010160 | Sotub12g010160 | LUT2 | Lycopene beta cyclase | 16.1.4.4 secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase | 16.1.4.5 secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase | 2 | 0.171980198043745 | 57 | 77 | 68 | -32.9 | -22.48 | 0.6832826747720371 | 3 |
| vsiRNA268 | Sotub02g035460 | Sotub02g035460 | CAO | Ankyrin repeat-containing protein | 28.1 DNA.synthesis/chromatin structure | 29.3.3 protein.targeting.chloroplast | 3 | 0.0201019635376769 | 737 | 759 | 750 | -33.9 | -22.8 | 0.6725663716814161 | 2 |
| vsiRNA285 | Sotub03g025810 | Sotub03g025810 | RPL27AB | 60S ribosomal protein L27A | 29.2.1.2.2.527 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.0053113852267952 | 282 | 302 | 293 | -33.9 | -27.4 | 0.808259587020649 | 3 |
| vsiRNA293 | Sotub09g024850 | Sotub09g024850 | PKP1 | Pyruvate kinase | 4.2.14 glycolysis.plastid branch.pyruvate kinase (PK) | 11.1.30 lipid metabolism.FA synthesis and FA elongation.pyruvate kinase | 2 | 0.13853008202602202 | 172 | 195 | 184 | -36.4 | -23.68 | 0.650549450549451 | 2 |
| vsiRNA301 | Sotub04g029370 | Sotub04g029370 | M-type | MADS box transcription factor | 27.3.24 RNA.regulation of transcription.MADS box transcription factor family | 33.99 development.unspecified | 2 | 0.0115004948776717 | 187 | 207 | 198 | -26.4 | -21.1 | 0.7992424242424241 | 3 |
| vsiRNA316 | Sotub02g024070 | Sotub02g024070 | F12F1.20 | Proline synthetase co-transcribed bacterial homolog protein | 28.1 DNA.synthesis/chromatin structure | 1 | 0.0253710217697727 | 20 | 40 | 31 | -37.7 | -24.7 | 0.6551724137931031 | 3 |
| vsiRNA318 | Sotub09g009340 | Sotub09g009340 | HSP70-10 | heat shock protein | 10.3 cell wall.hemicellulose synthesis | 20.2.1 stress.abiotic.heat | 26.10 misc.cytochrome P450 | 29.6 protein.folding | 34.99 transport.misc | 2 | 0.022868728372912 | 1092 | 1116 | 1103 | -33.7 | -26.1 | 0.7744807121661721 | 1 |
| vsiRNA326 | Sotub03g027740 | Sotub03g027740 | KLCR1 | Kinesin light chain | 31.1 cell.organisation | 0 | 0.10809780100676201 | 235 | 258 | 246 | -35.3 | -23.2 | 0.6572237960339941 | 1 |
| vsiRNA326 | Sotub07g016970 | Sotub07g016970 | PSBP1 | Oxygen-evolving enhancer protein 2, chloroplastic | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 34.19.3 transport.major intrinsic proteins.NIP | 2 | 0.226787259063457 | 631 | 649 | 642 | -35.3 | -24.2 | 0.685552407932011 | 3 |
| vsiRNA349 | Sotub01g048710 | Sotub01g048710 | CSP1 | Cold shock protein-1 | 20.2.2 stress.abiotic.cold | 27.3.75 RNA.regulation of transcription.GRP | 3 | 0.0166662501301529 | 311 | 330 | 321 | -31.7 | -23.5 | 0.7413249211356471 | 2 |
| vsiRNA357 | Sotub03g034570 | Sotub03g034570 | RSH2 | (P)ppGpp synthetase I (GTP pyrophosphokinase) SpoT/RelA | 20.1.5 stress.biotic.regulation of transcription | 30.3 signalling.calcium | 2 | 0.0183034237371876 | 492 | 511 | 502 | -37.4 | -26.6 | 0.711229946524064 | 1 |
| vsiRNA358 | Sotub02g024050 | Sotub02g024050 | F12F1.21 | Genomic DNA chromosome 5 P1 clone MCO15 | 35.1 not assigned.no ontology | 0 | 0.101411665229492 | 71 | 97 | 82 | -31.4 | -20.54 | 0.654140127388535 | 2 |
| vsiRNA364 | Sotub10g014130 | Sotub10g014130 | F21H2.4 | Serine/threonine phosphatase family protein | 20.2.3 stress.abiotic.drought/salt | 29.4 protein.postranslational modification | 0 | 0.0554454358496834 | 591 | 617 | 608 | -31.5 | -20.5 | 0.650793650793651 | 3 |
| vsiRNA364 | Sotub08g007890 | Sotub08g007890 | Sotub08g007890.1.1 | Transmembrane protein 85 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 33.99 development.unspecified | 2 | 0.008541413503587721 | 209 | 230 | 221 | -31.5 | -24.5 | 0.777777777777778 | 2 |
| vsiRNA372 | PGSC0003DMC400066380 | PGSC0003DMG400044276 | PGSC0003DMG400044276 | RRNA intron-encoded homing endonuclease | 35.2 not assigned.unknown | 2 | 0.159675931285841 | 474 | 499 | 490 | -33.4 | -22.8 | 0.6826347305389221 | 2 |
| vsiRNA379 | Sotub03g034970 | Sotub03g034970 | PDAT1 | Phospholipid diacylglycerol acyltransferase | 11.8.10 lipid metabolism.exotics (steroids, squalene etc).phosphatidylcholine-sterol O-acyltransferase | 27.3.44 RNA.regulation of transcription.chromatin remodeling factors | 31.1 cell.organisation | 2 | 0.261469502921376 | 296 | 317 | 307 | -34.7 | -23.8 | 0.6858789625360231 | 2 |
| vsiRNA382 | Sotub01g026190 | Sotub01g026190 | CCD1 | 9-cis-epoxycarotenoid dioxygenase | 16.1.4.10 secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase | 17.1.1.1.10 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase | 2 | 0.172994793056047 | 1220 | 1242 | 1233 | -33 | -22.1 | 0.66969696969697 | 3 |
| vsiRNA383 | Sotub02g021290 | Sotub02g021290 | F13I12.210 | Ring finger protein 141 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 2 | 0.0028552827145458303 | 137 | 158 | 149 | -33.2 | -29.2 | 0.879518072289157 | 0 |
| vsiRNA387 | Sotub06g022240 | Sotub06g022240 | SRF1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 | 29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII | 30.2.5 signalling.receptor kinases.leucine rich repeat V | 2 | 0.0602405202746374 | 500 | 520 | 511 | -29.1 | -20.9 | 0.7182130584192441 | 2 |
| vsiRNA388 | Sotub06g019450 | Sotub06g019450 | T5M16.21 | Replication factor C subunit 1 | 35.2 not assigned.unknown | 1 | 0.0127511432585188 | 2515 | 2535 | 2526 | -29.2 | -19.6 | 0.671232876712329 | 3 |
| vsiRNA405 | Sotub03g030880 | Sotub03g030880 | F7H2.8 | Leucine-rich repeat family protein | 35.1 not assigned.no ontology | 2 | 0.278651691712249 | 1047 | 1067 | 1059 | -31.1 | -20.6 | 0.6623794212218651 | 2 |
| vsiRNA414 | Sotub04g021060 | Sotub04g021060 | ABCF2 | ABC transporter ATP-binding protein | 34.16 transport.ABC transporters and multidrug resistance systems | 2 | 0.0978373512616476 | 316 | 336 | 327 | -27.8 | -20.6 | 0.741007194244604 | 1 |
| vsiRNA414 | Sotub04g022750 | Sotub04g022750 | ATH13 | ABC-1 domain protein | 20.2 stress.abiotic | 2 | 0.6786320734741591 | 174 | 195 | 185 | -27.8 | -18.6 | 0.669064748201439 | 1 |
| vsiRNA414 | Sotub12g005120 | Sotub12g005120 | Sotub12g005120.1.1 | Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A | 35.1 not assigned.no ontology | 3 | 0.171040848205883 | 1483 | 1503 | 1494 | -27.8 | -18.8 | 0.6762589928057551 | 3 |
| vsiRNA420 | Sotub08g007240 | Sotub08g007240 | GGCT2;1 | Cation transport regulator-like protein 2 | 29.2.2 protein.synthesis.ribosome biogenesis | 34.14 transport.unspecified cations | 2 | 0.0392404748912505 | 188 | 210 | 199 | -39.7 | -27.2 | 0.6851385390428211 | 1 |
| vsiRNA428 | Sotub02g017370 | Sotub02g017370 | LHB1B1 | Chlorophyll a-b binding protein 1B, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.0866254484798032 | 332 | 354 | 345 | -33.3 | -23.4 | 0.7027027027027031 | 3 |
| vsiRNA431 | Sotub03g024600 | Sotub03g024600 | SYNC1 | Asparaginyl-tRNA synthetase | 29.1.22 protein.aa activation.asparagine-tRNA ligase | 2 | 0.07164728451466319 | 330 | 353 | 341 | -43.5 | -29.3 | 0.673563218390805 | 3 |
| vsiRNA448 | Sotub06g011040 | Sotub06g011040 | CAN1 | Nuclease | 28.99 DNA.unspecified | 2 | 0.0331659629967465 | 753 | 771 | 762 | -30.9 | -21.8 | 0.7055016181229771 | 3 |
| vsiRNA450 | Sotub11g009230 | Sotub11g009230 | GRF6 | GF14 protein | 15.2 metal handling.binding, chelation and storage | 30.7 signalling.14-3-3 proteins | 2 | 0.22023673555824702 | 170 | 200 | 191 | -30.4 | -20.3 | 0.6677631578947371 | 3 |
| vsiRNA451 | Sotub08g029410 | Sotub08g029410 | Sotub08g029410.1.1 | HAD-superfamily hydrolase subfamily IA variant 3 | 20.1.7.6 stress.biotic.PR-proteins.PR6 (proteinase inhibitors) | 2 | 0.0210894451757768 | 970 | 990 | 981 | -41.6 | -30 | 0.721153846153846 | 2 |
| vsiRNA451 | Sotub06g032770 | Sotub06g032770 | PDX11 | Pyridoxal biosynthesis lyase pdxS | 17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated | 18 Co-factor and vitamine metabolism | 2 | 0.0321546886602152 | 475 | 497 | 488 | -41.6 | -29.4 | 0.706730769230769 | 3 |
| vsiRNA474 | Sotub11g025090 | Sotub11g025090 | Sotub11g025090.1.1 | Hydrolase alpha/beta fold family protein | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 0 | 0.0168740142812904 | 730 | 752 | 741 | -32.9 | -23.4 | 0.711246200607903 | 2 |
| vsiRNA474 | Sotub09g005160 | Sotub09g005160 | LHCB4.1 | Chlorophyll a-b binding protein 6, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 3 | 0.06708016943908801 | 226 | 246 | 237 | -32.9 | -22.6 | 0.68693009118541 | 3 |
| vsiRNA480 | PGSC0003DMC400066242 | PGSC0003DMG400044138 | PGSC0003DMG400044138 | Integrase core domain containing protein | 16.1.5 secondary metabolism.isoprenoids.terpenoids | 20.1.2 stress.biotic.receptors | 27.2 RNA.transcription | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 0 | 0.014702807621077299 | 488 | 509 | 499 | -34.6 | -23.1 | 0.6676300578034681 | 3 |
| vsiRNA482 | PGSC0003DMC400066441 | PGSC0003DMG400044337 | PGSC0003DMG400044337 | Gene of unknown function | 3.3 minor CHO metabolism.sugar alcohols | 12.4 N-metabolism.misc | 16.8.3 secondary metabolism.flavonoids.dihydroflavonols | 17.4.1 hormone metabolism.cytokinin.synthesis-degradation | 20.1 stress.biotic | 26.10 misc.cytochrome P450 | 27.2 RNA.transcription | 27.4 RNA.RNA binding | 28.1.1.4 DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase | 29.2.2 protein.synthesis.ribosome biogenesis | 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP | 31.4 cell.vesicle transport | 0 | 0.00947600489241129 | 100 | 120 | 111 | -37.6 | -24.9 | 0.6622340425531911 | 3 |
| vsiRNA482 | Sotub07g023620 | Sotub07g023620 | FUG1 | Translation initiation factor IF-2 | 29.2.3 protein.synthesis.initiation | 2 | 0.008541413503587721 | 2818 | 2838 | 2829 | -37.6 | -27.4 | 0.728723404255319 | 3 |
| vsiRNA492 | Sotub06g032860 | Sotub06g032860 | BRR2A | Related to ATP dependent RNA helicase | 27.1.2 RNA.processing.RNA helicase | 28.1 DNA.synthesis/chromatin structure | 2 | 0.100392365136536 | 3640 | 3662 | 3651 | -32.4 | -22.8 | 0.703703703703704 | 3 |
| vsiRNA493 | Sotub07g025750 | Sotub07g025750 | Sotub07g025750.1.1 | Glutathione transferase | 26.9 misc.glutathione S transferases | 2 | 0.124656168463754 | 390 | 411 | 402 | -30.6 | -20.1 | 0.6568627450980391 | 3 |
| vsiRNA505 | Sotub10g014960 | Sotub10g014960 | Sotub10g014960.1.1 | Polyadenylate-binding protein 4 | 27.3.99 RNA.regulation of transcription.unclassified | 28.99 DNA.unspecified | 2 | 0.0209831428393452 | 982 | 1002 | 993 | -35.4 | -27.5 | 0.77683615819209 | 2 |
| vsiRNA507 | Sotub08g026980 | Sotub08g026980 | CP5 | Membrane related protein | 11.6 lipid metabolism.lipid transfer proteins etc | 30.9 signalling.lipids | 0 | 0.0024873355856784903 | 782 | 807 | 793 | -38.6 | -29 | 0.7512953367875651 | 0 |
| vsiRNA534 | Sotub11g010760 | Sotub11g010760 | T32M21_60 | Protein neuralized (Fragment) | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 0 | 0.0125268059107591 | 47 | 70 | 59 | -34.1 | -23.3 | 0.683284457478006 | 3 |
| vsiRNA546 | Sotub10g029020 | Sotub10g029020 | T4D2.70 | O-methyltransferase 1 | 16.2.1.9 secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT | 26.6 misc.O-methyl transferases | 2 | 0.118219517186191 | 741 | 765 | 756 | -33 | -23.3 | 0.706060606060606 | 0 |
| vsiRNA550 | Sotub10g019860 | Sotub10g019860 | T10K17.260 | Unknown Protein | 35.2 not assigned.unknown | 1 | 0.0040246150793255 | 2654 | 2675 | 2666 | -34 | -23.9 | 0.7029411764705881 | 1 |
| vsiRNA554 | Sotub01g038820 | Sotub01g038820 | GTC2 | FACT complex subunit SPT16 | 27.3.52 RNA.regulation of transcription.global transcription factor group | 29.5.7 protein.degradation.metalloprotease | 2 | 0.0663230732661977 | 2268 | 2288 | 2279 | -35.4 | -24.8 | 0.7005649717514131 | 2 |
| vsiRNA557 | Sotub01g005600 | Sotub01g005600 | PUX2 | UBX domain protein 6 | 11.1.30 lipid metabolism.FA synthesis and FA elongation.pyruvate kinase | 27.3.99 RNA.regulation of transcription.unclassified | 2 | 0.0447191222950679 | 411 | 431 | 422 | -28.3 | -19.9 | 0.703180212014134 | 2 |
| vsiRNA563 | Sotub10g012420 | Sotub10g012420 | Sotub10g012420.1.1 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.0759989794763071 | 20 | 40 | 31 | -29 | -21.2 | 0.731034482758621 | 1 |
| vsiRNA563 | Sotub12g031950 | Sotub12g031950 | AGT1 | Serine-glyoxylate aminotransferase | 1.2.3 PS.photorespiration.aminotransferases peroxisomal | 13.1.1.3.11 amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase | 13.1.5.2.3 amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.serine glyoxylate aminotransferase | 2 | 0.260499739199192 | 835 | 858 | 845 | -29 | -19.5 | 0.6724137931034481 | 1 |
| vsiRNA567 | MICRO.2286.C91 | MICRO.2286.C91 | MICRO.2286.C91 | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 1 | 0.0274609785451687 | 275 | 297 | 288 | -36.4 | -24.3 | 0.6675824175824181 | 3 |
| vsiRNA581 | bf_acdaxxxx_0064f12.t3m.scf | bf_acdaxxxx_0064f12.t3m.scf | bf_acdaxxxx_0064f12.t3m.scf | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 1 | 0.0727159055617959 | 600 | 621 | 610 | -32 | -21.7 | 0.678125 | 2 |
| vsiRNA581 | Sotub02g034270 | Sotub02g034270 | CLPB1 | Chaperone protein clpB 2 | 20.2.1 stress.abiotic.heat | 29.5.5 protein.degradation.serine protease | 1 | 0.15011356840523302 | 1713 | 1734 | 1725 | -32 | -20.9 | 0.653125 | 3 |
| vsiRNA581 | Sotub03g006550 | Sotub03g006550 | T3A5.70 | Acidic leucine-rich nuclear phosphoprotein 32 family member A | 35.1 not assigned.no ontology | 2 | 0.0451057587246402 | 1059 | 1080 | 1070 | -32 | -24.5 | 0.765625 | 2 |
| vsiRNA581 | Sotub10g026950 | Sotub10g026950 | Sotub10g026950.1.1 | RNA-binding protein | 27.4 RNA.RNA binding | 2 | 0.00141999115323088 | 193 | 213 | 204 | -32 | -26.8 | 0.8375 | 2 |
| vsiRNA581 | Sotub02g036460 | Sotub02g036460 | Sotub02g036460.1.1 | Unknown Protein | 11.1.9 lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase | 16.1.5 secondary metabolism.isoprenoids.terpenoids | 29.2.3 protein.synthesis.initiation | 31.1 cell.organisation | 2 | 0.6279679991756311 | 6147 | 6168 | 6158 | -32 | -20.9 | 0.653125 | 3 |
| vsiRNA581 | Sotub04g031080 | Sotub04g031080 | ACBP3 | Acyl-CoA-binding domain-containing protein 6 | 11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein | 2 | 0.0528785712836159 | 807 | 827 | 818 | -32 | -24.8 | 0.775 | 3 |
| vsiRNA581 | Sotub08g017660 | Sotub08g017660 | Sotub08g017660.1.1 | Pre-mRNA-splicing factor CWC21 | 35.2 not assigned.unknown | 2 | 0.09264224737568601 | 1541 | 1563 | 1552 | -32 | -24.28 | 0.75875 | 3 |
| vsiRNA582 | Sotub06g019440 | Sotub06g019440 | PSBS | Chloroplast photosystem II-associated protein | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.3849749976308 | 274 | 293 | 285 | -28.6 | -19.5 | 0.6818181818181821 | 2 |
| vsiRNA588 | Sotub04g024990 | Sotub04g024990 | RPS2A | 30S ribosomal protein S5 | 29.2.1.2.1.2 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.008836626771715261 | 429 | 451 | 441 | -29.3 | -23.1 | 0.78839590443686 | 0 |
| vsiRNA590 | Sotub07g014980 | Sotub07g014980 | ALEU | Cathepsin L-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 3 | 0.0037878679585714404 | 651 | 670 | 662 | -32.8 | -24.6 | 0.75 | 3 |
| vsiRNA595 | Sotub06g029330 | Sotub06g029330 | RPL27AB | 60S ribosomal protein L27A | 29.2.1.2.2.527 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.302575903012686 | 10 | 30 | 21 | -32.1 | -21.7 | 0.67601246105919 | 3 |
| vsiRNA595 | Sotub09g012120 | Sotub09g012120 | FBP | Fructose-1 6-bisphosphatase class 1 | 1.3.7 PS.calvin cycle.FBPase | 21.6 redox.dismutases and catalases | 3 | 0.0802350833105087 | 1024 | 1045 | 1035 | -32.1 | -22.8 | 0.710280373831776 | 2 |
| vsiRNA596 | TC223471 | TC223471 | TC223471 | NA | 35.2 not assigned.unknown | 2 | 0.0028552827145458303 | 96 | 116 | 107 | -30.7 | -32.3 | 1 | 0 |
| vsiRNA598 | Sotub11g014000 | Sotub11g014000 | NIA1 | Nitrate reductase | 12.1.1 N-metabolism.nitrate metabolism.NR | 2 | 0.106187290886047 | 2220 | 2245 | 2231 | -31.7 | -21.1 | 0.665615141955836 | 3 |
| vsiRNA617 | PGSC0003DMC400043995 | PGSC0003DMG400025361 | PHOT1 | Phototropin-1 | 29.4 protein.postranslational modification | 30.11 signalling.light | 2 | 0.407662186912203 | 1390 | 1408 | 1399 | -29 | -19 | 0.6551724137931031 | 2 |
| vsiRNA624 | Sotub04g029950 | Sotub04g029950 | TUBA1 | Tubulin alpha-7 chain | 2.2.1.3.1 major CHO metabolism.degradation.sucrose.invertases.neutral | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 29.5.15 protein.degradation.inhibitors | 31.1 cell.organisation | 34.13 transport.peptides and oligopeptides | 2 | 0.0076817679167197105 | 1193 | 1213 | 1204 | -40.8 | -30 | 0.7352941176470591 | 2 |
| vsiRNA624 | Sotub12g026260 | Sotub12g026260 | TUBA1 | Tubulin alpha-5 chain | 2.2.1.3.1 major CHO metabolism.degradation.sucrose.invertases.neutral | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 29.5.15 protein.degradation.inhibitors | 31.1 cell.organisation | 34.13 transport.peptides and oligopeptides | 2 | 0.0170098712625362 | 1193 | 1213 | 1204 | -40.8 | -30 | 0.7352941176470591 | 2 |
| vsiRNA627 | Sotub12g008750 | Sotub12g008750 | Sotub12g008750.1.1 | chaperonin | 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated | 20.2.1 stress.abiotic.heat | 29.6 protein.folding | 2 | 0.16245538263453801 | 1149 | 1173 | 1160 | -39.9 | -27.2 | 0.681704260651629 | 3 |
| vsiRNA634 | Sotub06g033660 | Sotub06g033660 | GCH1 | GTP cyclohydrolase I | 25.7 C1-metabolism.GTP cyclohydrolase I | 3 | 0.0361950107025308 | 86 | 107 | 97 | -41.4 | -27.6 | 0.6666666666666671 | 2 |
| vsiRNA637 | Sotub12g026810 | Sotub12g026810 | RD21A | Cathepsin B-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 34.19.1 transport.major intrinsic proteins.PIP | 2 | 0.047053394013561296 | 823 | 843 | 834 | -34.2 | -25.1 | 0.7339181286549711 | 3 |
| vsiRNA639 | Sotub01g040390 | Sotub01g040390 | HSP70-10 | Chaperone DnaK | 20.2.1 stress.abiotic.heat | 2 | 0.627113632132119 | 272 | 293 | 284 | -35.2 | -23.2 | 0.6590909090909091 | 2 |
| vsiRNA639 | Sotub01g041600 | Sotub01g041600 | Sotub01g041600.1.1 | Pinin/SDK/memA protein | 35.1 not assigned.no ontology | 2 | 0.37967655861193605 | 1110 | 1130 | 1121 | -35.2 | -24 | 0.6818181818181821 | 2 |
| vsiRNA639 | Sotub10g028070 | Sotub10g028070 | RCA | Ribulose-1 5-bisphosphate carboxylase/oxygenase activase 1 | 1.3.13 PS.calvin cycle.rubisco interacting | 2 | 0.270927489517649 | 563 | 584 | 575 | -35.2 | -23.9 | 0.678977272727273 | 3 |
| vsiRNA645 | Sotub10g025970 | Sotub10g025970 | Sotub10g025970.1.1 | 40S ribosomal protein S17-like protein | 29.2.1.2.1.17 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.088176987979155 | 371 | 391 | 382 | -36.5 | -24.1 | 0.66027397260274 | 3 |
| vsiRNA646 | Sotub04g007810 | Sotub04g007810 | UEV1A | Ubiquitin-conjugating enzyme E2 variant 1 | 29.5.11.3 protein.degradation.ubiquitin.E2 | 2 | 0.0751354008019264 | 136 | 156 | 147 | -37.6 | -26.2 | 0.6968085106382981 | 3 |
| vsiRNA657 | Sotub12g011510 | Sotub12g011510 | NF-YB | Nuclear transcription factor Y subunit B-3 | 27.3.15 RNA.regulation of transcription.CCAAT box binding factor family, HAP3 | 2 | 0.282287745486045 | 409 | 432 | 423 | -34.5 | -22.74 | 0.659130434782609 | 3 |
| vsiRNA658 | Sotub08g026980 | Sotub08g026980 | CP5 | Membrane related protein | 11.6 lipid metabolism.lipid transfer proteins etc | 30.9 signalling.lipids | 2 | 0.0488887682682202 | 783 | 811 | 799 | -40.4 | -28.9 | 0.7153465346534651 | 0 |
| vsiRNA662 | Sotub11g017220 | Sotub11g017220 | T5L19.210 | Unknown Protein | 29.4 protein.postranslational modification | 34.22 transport.cyclic nucleotide or calcium regulated channels | 2 | 0.102336448730323 | 354 | 375 | 366 | -37 | -25.7 | 0.694594594594595 | 1 |
| vsiRNA662 | PGSC0003DMC400043995 | PGSC0003DMG400025361 | PHOT1 | Phototropin-1 | 29.4 protein.postranslational modification | 30.11 signalling.light | 2 | 0.221682936980259 | 1796 | 1816 | 1807 | -37 | -24.6 | 0.6648648648648651 | 2 |
| vsiRNA662 | Sotub07g008420 | Sotub07g008420 | F10M6.80 | Phosphatidylinositol binding clathrin assembly protein like | 7.1.2 OPP.oxidative PP.6-phosphogluconolactonase | 11.3 lipid metabolism.phospholipid synthesis | 28.2 DNA.repair | 29.5.11.1 protein.degradation.ubiquitin.ubiquitin | 2 | 0.059827018116847396 | 1190 | 1209 | 1201 | -37 | -26.4 | 0.7135135135135131 | 3 |
| vsiRNA671 | Sotub08g025180 | Sotub08g025180 | CYP706A1 | Flavonoid 3' 5'-hydroxylase-like cytochrome P450 | 16.8.3 secondary metabolism.flavonoids.dihydroflavonols | 26.10 misc.cytochrome P450 | 3 | 0.052297503240254596 | 1357 | 1378 | 1368 | -40.4 | -27 | 0.668316831683168 | 2 |
| vsiRNA674 | Sotub11g017360 | Sotub11g017360 | TAF15 | RNA binding protein | 27.3.99 RNA.regulation of transcription.unclassified | 27.4 RNA.RNA binding | 30.5 signalling.G-proteins | 2 | 0.0652488789973178 | 682 | 703 | 693 | -33.9 | -23.7 | 0.699115044247788 | 2 |
| vsiRNA676 | Sotub01g038530 | Sotub01g038530 | (SA):MOS | Importin alpha-1b subunit | 1.3.13 PS.calvin cycle.rubisco interacting | 29.3.1 protein.targeting.nucleus | 2 | 0.0396764110785153 | 1300 | 1319 | 1311 | -38.5 | -27.7 | 0.719480519480519 | 3 |
| vsiRNA676 | Sotub07g028540 | Sotub07g028540 | SAT1 | Serine acetyltransferase | 13.1.5.3.2 amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT | 15.2 metal handling.binding, chelation and storage | 17.3.1.1.1 hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2 | 2 | 0.159166852239769 | 730 | 750 | 741 | -38.5 | -25.2 | 0.6545454545454551 | 3 |
| vsiRNA683 | Sotub07g014980 | Sotub07g014980 | ALEU | Cathepsin L-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 2 | 0.0451057587246402 | 583 | 604 | 594 | -30 | -21.1 | 0.703333333333333 | 1 |
| vsiRNA683 | Sotub01g037560 | Sotub01g037560 | TCTP1 | Translationally-controlled tumor protein homolog | 33.99 development.unspecified | 3 | 0.016935646682296298 | 211 | 230 | 222 | -30 | -20.6 | 0.6866666666666671 | 3 |
| vsiRNA688 | Sotub04g031080 | Sotub04g031080 | ACBP3 | Acyl-CoA-binding domain-containing protein 6 | 11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein | 2 | 0.0141951196276943 | 616 | 637 | 628 | -38.2 | -28.3 | 0.740837696335078 | 0 |
| vsiRNA688 | Sotub06g019110 | Sotub06g019110 | HD-ZIP | Homeobox-leucine zipper protein | 27.3.22 RNA.regulation of transcription.homeobox transcription factor family (HB) | 33.99 development.unspecified | 2 | 0.17851477668607402 | 166 | 186 | 177 | -38.2 | -24.9 | 0.6518324607329841 | 2 |
| vsiRNA694 | Sotub04g035690 | Sotub04g035690 | FTSH1 | ATP-dependent zinc metalloprotease FtsH 1 | 29.5.7 protein.degradation.metalloprotease | 2 | 0.0262763124136347 | 965 | 986 | 977 | -31.5 | -22.3 | 0.7079365079365081 | 2 |
| vsiRNA701 | Sotub01g023090 | Sotub01g023090 | SECA1 | Protein translocase subunit secA | 29.3.3 protein.targeting.chloroplast | 2 | 0.152821002081641 | 2779 | 2796 | 2790 | -35.7 | -24.4 | 0.6834733893557421 | 3 |
| vsiRNA701 | Sotub12g013560 | Sotub12g013560 | HSP90-1 | Heat shock protein 90 | 20.2.1 stress.abiotic.heat | 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family | 3 | 0.015599440240092499 | 591 | 616 | 603 | -35.7 | -25.2 | 0.7058823529411761 | 0 |
| vsiRNA701 | Sotub01g040100 | Sotub01g040100 | Sotub01g040100.1.1 | Unknown Protein | 35.2 not assigned.unknown | 3 | 0.0821805300784549 | 655 | 680 | 666 | -35.7 | -24 | 0.672268907563025 | 3 |
| vsiRNA708 | Sotub07g014980 | Sotub07g014980 | ALEU | Cathepsin L-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 2 | 0.162654094777642 | 555 | 578 | 566 | -39 | -25.88 | 0.6635897435897441 | 2 |
| vsiRNA715 | Sotub09g022680 | Sotub09g022680 | CIP8 | E3 ubiquitin-protein ligase CG7694 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 31.1 cell.organisation | 2 | 0.20788131893142703 | 666 | 687 | 678 | -38.2 | -25.1 | 0.6570680628272251 | 2 |
| vsiRNA720 | Sotub12g007490 | Sotub12g007490 | T25C13.50 | Adenylate kinase-like protein | 23.4.1 nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase | 2 | 0.0978163758290949 | 1159 | 1179 | 1170 | -36 | -24.5 | 0.680555555555556 | 2 |
| vsiRNA734 | CN463167 | CN463167 | CN463167 | NA | 35.2 not assigned.unknown | 0 | 0.0169759908214826 | 160 | 179 | 170 | -36.9 | -25.5 | 0.691056910569106 | 3 |
| vsiRNA737 | Sotub08g014650 | Sotub08g014650 | GLDP1 | Glycine dehydrogenase P protein | 1.2.4.1 PS.photorespiration.glycine cleavage.P subunit | 13.2.5.2 amino acid metabolism.degradation.serine-glycine-cysteine group.glycine | 25 C1-metabolism | 2 | 0.230633968376722 | 2974 | 2998 | 2989 | -41.2 | -27.8 | 0.6747572815533981 | 1 |
| vsiRNA741 | Sotub02g008960 | Sotub02g008960 | NUP214 | Unknown Protein | 29.3.1 protein.targeting.nucleus | 33.99 development.unspecified | 1 | 0.0427926120912172 | 790 | 811 | 801 | -28.7 | -19.4 | 0.67595818815331 | 2 |
| vsiRNA741 | Sotub07g012380 | Sotub07g012380 | PRP40A | Pre-mRNA-processing factor 40 homolog A | 35.1 not assigned.no ontology | 2 | 0.378580132028683 | 2971 | 2995 | 2985 | -28.7 | -18.7 | 0.6515679442508711 | 1 |
| vsiRNA744 | Sotub07g026230 | Sotub07g026230 | bHLH | Transcription factor (Fragment) | 27.3.6 RNA.regulation of transcription.basic helix-loop-helix family (bHLH) | 2 | 0.561966032739394 | 137 | 163 | 148 | -30.4 | -20 | 0.6578947368421051 | 0 |
| vsiRNA744 | Sotub09g017390 | Sotub09g017390 | CBSX3 | CBS domain-containing protein | 35.1 not assigned.no ontology | 2 | 0.522157924976669 | 433 | 456 | 444 | -30.4 | -20.2 | 0.6644736842105261 | 2 |
| vsiRNA744 | Sotub01g043670 | Sotub01g043670 | PMDH1 | Malate dehydrogenase | 6.3 gluconeogenesis / glyoxylate cycle.malate dehydrogenase | 10.1.5 cell wall.precursor synthesis.UXS | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.583206285096403 | 401 | 421 | 412 | -30.4 | -19.9 | 0.654605263157895 | 3 |
| vsiRNA744 | Sotub08g014650 | Sotub08g014650 | GLDP1 | Glycine dehydrogenase P protein | 1.2.4.1 PS.photorespiration.glycine cleavage.P subunit | 13.2.5.2 amino acid metabolism.degradation.serine-glycine-cysteine group.glycine | 25 C1-metabolism | 2 | 0.381447757411559 | 746 | 766 | 757 | -30.4 | -21.5 | 0.707236842105263 | 3 |
| vsiRNA744 | Sotub08g017700 | Sotub08g017700 | Sotub08g017700.1.1 | Cortical cell-delineating protein | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 | 0.359030299749416 | 251 | 274 | 265 | -30.4 | -20.5 | 0.6743421052631581 | 3 |
| vsiRNA746 | Sotub08g008510 | Sotub08g008510 | CXIP4 | CAX-interacting protein 4 | 27.3.50 RNA.regulation of transcription.general transcription | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 34.21 transport.calcium | 2 | 0.5042778273930121 | 389 | 410 | 400 | -34.4 | -22.8 | 0.662790697674419 | 2 |
| vsiRNA757 | Sotub10g027120 | Sotub10g027120 | GTB1 | Transcription elongation factor SPT6 | 27.3.52 RNA.regulation of transcription.global transcription factor group | 28.1 DNA.synthesis/chromatin structure | 2 | 0.15441238132752702 | 88 | 107 | 99 | -41.1 | -27.4 | 0.6666666666666671 | 3 |
| vsiRNA759 | Sotub07g023620 | Sotub07g023620 | FUG1 | Translation initiation factor IF-2 | 29.2.3 protein.synthesis.initiation | 2 | 0.6184855739906361 | 2844 | 2865 | 2856 | -32.9 | -21.6 | 0.656534954407295 | 2 |
| vsiRNA760 | Sotub01g047550 | Sotub01g047550 | VHA-a1 | V-type proton ATPase subunit a | 10.1.5 cell wall.precursor synthesis.UXS | 26.27 misc.calcineurin-like phosphoesterase family protein | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 34.1 transport.p- and v-ATPases | 2 | 0.122864872654573 | 1694 | 1716 | 1707 | -33.5 | -22.2 | 0.6626865671641791 | 2 |
| vsiRNA794 | Sotub07g005920 | Sotub07g005920 | RPL35 | 50S ribosomal protein L35 | 29.2.1.1.3.2.35 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35 | 2 | 0.36745031431219505 | 73 | 94 | 85 | -38.1 | -24.8 | 0.650918635170604 | 3 |
| vsiRNA801 | PGSC0003DMC400066003 | PGSC0003DMG400043899 | PGSC0003DMG400043899 | Gene of unknown function | 28.2 DNA.repair | 0 | 0.029443062350869898 | 725 | 745 | 736 | -29.3 | -19.8 | 0.675767918088737 | 3 |
| vsiRNA806 | Sotub11g020310 | Sotub11g020310 | PSB33 | Rieske (2Fe-2S) domain protein | 26.30 misc.other Ferredoxins and Rieske domain | 2 | 0.00959297188570685 | 599 | 625 | 616 | -37.8 | -29.3 | 0.775132275132275 | 1 |
| vsiRNA806 | Sotub10g005320 | Sotub10g005320 | Sotub10g005320.1.1 | Suppressor of white-apricot | 27.1 RNA.processing | 2 | 0.028019956316182298 | 960 | 983 | 974 | -37.8 | -27.1 | 0.7169312169312171 | 2 |
| vsiRNA807 | Sotub09g019820 | Sotub09g019820 | SCY2 | Preprotein translocase secY subunit | 29.3.3 protein.targeting.chloroplast | 29.3.4.99 protein.targeting.secretory pathway.unspecified | 1 | 0.004156594939286331 | 680 | 705 | 695 | -37.4 | -25.32 | 0.6770053475935831 | 2 |
| vsiRNA819 | Sotub06g022580 | Sotub06g022580 | LHCB5 | Chlorophyll a-b binding protein, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 2 | 0.0501665281898594 | 436 | 456 | 447 | -31.4 | -22.9 | 0.729299363057325 | 3 |
| vsiRNA826 | Sotub05g011100 | Sotub05g011100 | SKIP11 | Kelch-like protein 17 | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 2 | 0.152184098593991 | 62 | 88 | 78 | -36.1 | -23.5 | 0.650969529085873 | 1 |
| vsiRNA826 | Sotub11g012440 | Sotub11g012440 | OTU1 | Nodulin-like protein (Fragment) | 1.1.2.1 PS.lightreaction.photosystem I.LHC-I | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 33.99 development.unspecified | 2 | 0.0057668758674712705 | 1510 | 1531 | 1522 | -36.1 | -27.7 | 0.767313019390582 | 1 |
| vsiRNA826 | Sotub07g005290 | Sotub07g005290 | TPS10 | Alpha alpha-trehalose-phosphate synthase (UDP-forming) | 3.2.1 minor CHO metabolism.trehalose.TPS | 34.16 transport.ABC transporters and multidrug resistance systems | 2 | 0.15523993763052402 | 919 | 941 | 930 | -36.1 | -24.1 | 0.6675900277008311 | 2 |
| vsiRNA830 | Sotub08g013270 | Sotub08g013270 | Sotub08g013270.1.1 | Unknown Protein | 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 0 | 0.120380028523485 | 134 | 152 | 143 | -30 | -19.9 | 0.663333333333333 | 3 |
| vsiRNA830 | Sotub04g025090 | Sotub04g025090 | ndhM | NAD(P)H-quinone oxidoreductase subunit M | 1.1.6 PS.lightreaction.NADH DH | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 | 0.6040371346613831 | 283 | 304 | 294 | -30 | -20.2 | 0.673333333333333 | 3 |
| vsiRNA836 | Sotub11g005380 | Sotub11g005380 | RAF1 | Homology to unknown gene | 31.3.1 cell.cycle.peptidylprolyl isomerase | 3 | 0.0372805969569171 | 393 | 411 | 402 | -31.6 | -21.3 | 0.674050632911392 | 3 |
| vsiRNA839 | Sotub04g007790 | Sotub04g007790 | Sotub04g007790.1.1 | 1-aminocyclopropane-1-carboxylate oxidase | 17.5.1 hormone metabolism.ethylene.synthesis-degradation | 30.1 signalling.in sugar and nutrient physiology | 2 | 0.028019956316182298 | 674 | 696 | 686 | -40.4 | -28.9 | 0.7153465346534651 | 1 |
| vsiRNA842 | Sotub12g015480 | Sotub12g015480 | T1F15.12 | Endoplasmic reticulum metallopeptidase 1 (Fragment) | 29.5 protein.degradation | 0 | 0.0206570324605905 | 885 | 904 | 895 | -32.1 | -22.9 | 0.713395638629283 | 2 |
| vsiRNA842 | Sotub08g007140 | Sotub08g007140 | RPS6A | 40S ribosomal protein S6 | 29.2.1.2.1.6 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6 | 29.2.2 protein.synthesis.ribosome biogenesis | 3 | 0.19764911123508702 | 336 | 356 | 347 | -32.1 | -21 | 0.654205607476635 | 3 |
| vsiRNA847 | Sotub04g032750 | Sotub04g032750 | TPP1 | Signal peptidase I | 29.3.3 protein.targeting.chloroplast | 2 | 0.0365924860951974 | 771 | 791 | 782 | -33.2 | -23 | 0.692771084337349 | 2 |
| vsiRNA848 | Sotub06g034140 | Sotub06g034140 | PSAE1 | Photosystem I reaction center subunit IV A | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 | 0.0701968581303722 | 289 | 311 | 300 | -37.5 | -24.5 | 0.6533333333333331 | 2 |
| vsiRNA849 | Sotub02g036100 | Sotub02g036100 | BCA1 | Carbonic anhydrase | 8.3 TCA / organic transformation.carbonic anhydrases | 16.99 secondary metabolism.unspecified | 3 | 0.202729643106582 | 607 | 631 | 622 | -34.6 | -22.5 | 0.65028901734104 | 1 |
| vsiRNA867 | Sotub03g018880 | Sotub03g018880 | AtOR | Chaperone protein dnaJ-like | 29.6 protein.folding | 2 | 0.18606470827785102 | 202 | 221 | 212 | -35.9 | -23.9 | 0.6657381615598891 | 1 |
| vsiRNA876 | Sotub09g025630 | Sotub09g025630 | dl3195c | Peroxisomal membrane protein-like | 35.1 not assigned.no ontology | 1 | 0.0104689283187916 | 2318 | 2337 | 2328 | -32.4 | -23.4 | 0.7222222222222221 | 3 |
| vsiRNA876 | Sotub07g017980 | Sotub07g017980 | LHB1B1 | Chlorophyll a-b binding protein 4, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.0746244157931704 | 63 | 86 | 77 | -32.4 | -21.8 | 0.67283950617284 | 0 |
| vsiRNA892 | Sotub02g035460 | Sotub02g035460 | CAO | Ankyrin repeat-containing protein | 28.1 DNA.synthesis/chromatin structure | 29.3.3 protein.targeting.chloroplast | 3 | 0.07044581968087729 | 737 | 758 | 748 | -33 | -21.5 | 0.651515151515151 | 2 |
| vsiRNA914 | Sotub01g047260 | Sotub01g047260 | THY-1 | Thymidylate synthase | 23.5.1 nucleotide metabolism.deoxynucleotide metabolism.dihydrofolate reductase-thymidylate synthase | 25 C1-metabolism | 0 | 0.00341849055867449 | 889 | 909 | 900 | -36.5 | -26.1 | 0.7150684931506851 | 2 |
| vsiRNA921 | Sotub01g040690 | Sotub01g040690 | NIFU2 | Fe/S biogenesis protein nfuA | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.8 protein.assembly and cofactor ligation | 2 | 0.108723900903731 | 384 | 403 | 394 | -29.6 | -20.9 | 0.706081081081081 | 2 |
| vsiRNA921 | Sotub09g009340 | Sotub09g009340 | HSP70-10 | heat shock protein | 10.3 cell wall.hemicellulose synthesis | 20.2.1 stress.abiotic.heat | 26.10 misc.cytochrome P450 | 29.6 protein.folding | 34.99 transport.misc | 2 | 0.37967655861193605 | 1448 | 1468 | 1459 | -29.6 | -20.1 | 0.6790540540540541 | 2 |
| vsiRNA921 | Sotub09g030460 | Sotub09g030460 | GWD3 | Phosphoglucan water dikinase | 2.2.2.3 major CHO metabolism.degradation.starch.glucan water dikinase | 27.3.28 RNA.regulation of transcription.squamosa promoter binding protein family (SBP) | 2 | 0.21449190462761702 | 2842 | 2860 | 2851 | -29.6 | -20.4 | 0.689189189189189 | 2 |
| vsiRNA921 | Sotub11g023820 | Sotub11g023820 | HSP70-10 | heat shock protein | 10.3 cell wall.hemicellulose synthesis | 20.2.1 stress.abiotic.heat | 26.10 misc.cytochrome P450 | 29.6 protein.folding | 34.99 transport.misc | 2 | 0.27666284388913404 | 1448 | 1468 | 1459 | -29.6 | -20.1 | 0.6790540540540541 | 2 |
| vsiRNA921 | Sotub10g005220 | Sotub10g005220 | PMI1 | Receptor protein kinase-like protein | 29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII | 31.1 cell.organisation | 2 | 0.0501665281898594 | 2484 | 2502 | 2493 | -29.6 | -22.6 | 0.763513513513513 | 3 |
| vsiRNA931 | Sotub10g005100 | Sotub10g005100 | T24A18.70 | DDRGK domain-containing protein 1 | 29.2.2 protein.synthesis.ribosome biogenesis | 0 | 0.023879433802214498 | 631 | 650 | 641 | -33.5 | -23.5 | 0.7014925373134331 | 2 |
| vsiRNA931 | Sotub02g036460 | Sotub02g036460 | Sotub02g036460.1.1 | Unknown Protein | 11.1.9 lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase | 16.1.5 secondary metabolism.isoprenoids.terpenoids | 29.2.3 protein.synthesis.initiation | 31.1 cell.organisation | 2 | 0.00354406544175001 | 7429 | 7449 | 7440 | -33.5 | -26.7 | 0.797014925373134 | 1 |
| vsiRNA957 | Sotub05g029350 | Sotub05g029350 | T5N23_140 | Inter-alpha-trypsin inhibitor heavy chain H3 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 29.5.15 protein.degradation.inhibitors | 3 | 0.0416849418535562 | 1898 | 1919 | 1909 | -37.5 | -25.6 | 0.6826666666666671 | 2 |
| vsiRNA960 | Sotub03g008810 | Sotub03g008810 | HMGB1 | High mobility group protein | 27.3.53 RNA.regulation of transcription.high mobility group family (HMG) | 27.3.62 RNA.regulation of transcription.nucleosome/chromatin assembly factor group | 3 | 0.0292084922356523 | 312 | 332 | 324 | -33.3 | -22.1 | 0.663663663663664 | 2 |
| vsiRNA965 | Sotub01g041180 | Sotub01g041180 | AKR2A | Ankyrin repeat domain-containing protein 2 | 27.3.39 RNA.regulation of transcription.AtSR transcription factor family | 31.1 cell.organisation | 3 | 0.0013839626338477701 | 280 | 306 | 291 | -40 | -32.4 | 0.81 | 2 |
| vsiRNA971 | Sotub10g019510 | Sotub10g019510 | C2H2 | Zinc finger protein | 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family | 2 | 0.088176987979155 | 437 | 464 | 455 | -40.1 | -26.6 | 0.6633416458852871 | 2 |
| vsiRNA973 | Sotub02g021290 | Sotub02g021290 | F13I12.210 | Ring finger protein 141 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 0 | 3.1125581785485E-4 | 138 | 159 | 150 | -32.5 | -28.7 | 0.8830769230769231 | 1 |
| vsiRNA987 | Sotub01g044370 | Sotub01g044370 | NPY1 | Transposon protein Mutator sub-class | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 30.11 signalling.light | 2 | 0.39383365461956205 | 219 | 240 | 232 | -31.5 | -20.8 | 0.66031746031746 | 3 |
| vsiRNA990 | Sotub03g013130 | Sotub03g013130 | SS1 | Glycogen synthase 2 | 2.1.2.2 major CHO metabolism.synthesis.starch.starch synthase | 21.2 redox.ascorbate and glutathione | 2 | 0.00141999115323088 | 1684 | 1704 | 1695 | -30.9 | -25.6 | 0.8284789644012951 | 2 |
| vsiRNA993 | Sotub02g028890 | Sotub02g028890 | RBL9 | Rhomboid family protein | 20.2.1 stress.abiotic.heat | 29.5.5 protein.degradation.serine protease | 2 | 0.11377554493065 | 987 | 1009 | 999 | -34.1 | -22.4 | 0.6568914956011731 | 2 |
| vsiRNA993 | Sotub03g017170 | Sotub03g017170 | Sotub03g017170.1.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 | 26.16 misc.myrosinases-lectin-jacalin | 30.2.17 signalling.receptor kinases.DUF 26 | 30.2.19 signalling.receptor kinases.legume-lectin | 2 | 0.07184596215176779 | 1165 | 1189 | 1177 | -34.1 | -23.1 | 0.67741935483871 | 2 |
| vsiRNA993 | Sotub01g009150 | Sotub01g009150 | RPT6A | 26S protease regulatory subunit 8 | 29.5.11.20 protein.degradation.ubiquitin.proteasom | 30.2.16 signalling.receptor kinases.Catharanthus roseus-like RLK1 | 3 | 0.0812083216047377 | 775 | 804 | 790 | -34.1 | -22.42 | 0.6574780058651031 | 1 |
| vsiRNA993 | Sotub11g025940 | Sotub11g025940 | ABCF1 | ATP-binding cassette | 34.16 transport.ABC transporters and multidrug resistance systems | 3 | 0.00184485774691412 | 1449 | 1467 | 1461 | -34.1 | -26.5 | 0.7771260997067451 | 3 |
| vsiRNA996 | Sotub02g011200 | Sotub02g011200 | GRDP1 | Hypothetical YFW family protein 5 | 35.1.40 not assigned.no ontology.glycine rich proteins | 3 | 0.115567431021296 | 2024 | 2051 | 2035 | -33.1 | -22.08 | 0.6670694864048341 | 3 |
| vsiRNA997 | ACDA03514E10.T3m.scf | ACDA03514E10.T3m.scf | ACDA03514E10.T3m.scf | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 0 | 0.0112812194079799 | 16 | 36 | 27 | -30.5 | -22.8 | 0.7475409836065571 | 2 |
| vsiRNA997 | Sotub02g011270 | Sotub02g011270 | Sotub02g011270.1.1 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.519606369343755 | 24 | 48 | 39 | -30.5 | -20 | 0.6557377049180331 | 2 |
