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| vsiRNA35012 | Sotub02g005830 | Sotub02g005830 | F19K19.2 | Enhancer of polycomb-like protein | 27.3.65 RNA.regulation of transcription.polycomb group (PcG) | 1 | 0.0146779109872444 | 166 | 185 | 176 | -30.5 | -20.4 | 0.668852459016393 | 2 |
| vsiRNA35019 | Sotub01g035320 | Sotub01g035320 | ZDS1 | Zeta-carotene desaturase | 16.1.4.3 secondary metabolism.isoprenoids.carotenoids.zeta-carotene desaturase | 2 | 0.6096578749029891 | 137 | 154 | 145 | -24.3 | -15.9 | 0.654320987654321 | 3 |
| vsiRNA35046 | Sotub09g025420 | Sotub09g025420 | RNP1 | Heterogeneous nuclear ribonucleoprotein A3 | 27.4 RNA.RNA binding | 2 | 0.18796226328887902 | 901 | 928 | 918 | -40 | -26.7 | 0.6675 | 1 |
| vsiRNA35051 | AM909445 | AM909445 | AM909445 | NA | 35.2 not assigned.unknown | 0 | 9.449977931887951E-4 | 213 | 232 | 223 | -32 | -26.4 | 0.8250000000000001 | 2 |
| vsiRNA35058 | Sotub01g008440 | Sotub01g008440 | Sotub01g008440.1.1 | Alpha/beta superfamily hydrolase | 35.2 not assigned.unknown | 2 | 0.0848253623676724 | 948 | 967 | 958 | -31.5 | -24.2 | 0.7682539682539681 | 3 |
| vsiRNA35075 | Sotub08g022600 | Sotub08g022600 | IP5P2 | Inositol 1 4 5-trisphosphate 5-phosphatase | 3.4.1 minor CHO metabolism.myo-inositol.poly-phosphatases | 28.1 DNA.synthesis/chromatin structure | 2 | 0.19425828848221702 | 1562 | 1580 | 1571 | -34 | -22.1 | 0.65 | 2 |
| vsiRNA35095 | PGSC0003DMC400029199 | PGSC0003DMG401016693 | AtSINAL7 | Ubiquitin-protein ligase | 33.99 development.unspecified | 1 | 0.0136123244949874 | 121 | 139 | 131 | -33.4 | -24.2 | 0.7245508982035931 | 2 |
| vsiRNA35100 | Sotub01g038210 | Sotub01g038210 | CRT1 | Calreticulin 2 calcium-binding protein | 30.3 signalling.calcium | 2 | 0.23784290242167103 | 216 | 238 | 230 | -32.6 | -21.46 | 0.658282208588957 | 3 |
| vsiRNA35108 | Sotub11g026570 | Sotub11g026570 | Sotub11g026570.1.1 | Aquaporin | 34.19.1 transport.major intrinsic proteins.PIP | 2 | 0.78361970561034 | 681 | 699 | 691 | -35.7 | -23.3 | 0.65266106442577 | 3 |
| vsiRNA35124 | Sotub01g032580 | Sotub01g032580 | LEA14 | Late embryogenesis abundant protein | 33.2 development.late embryogenesis abundant | 1 | 0.0374805117332617 | 256 | 280 | 266 | -30.4 | -21.1 | 0.694078947368421 | 3 |
| vsiRNA35124 | Sotub07g019150 | Sotub07g019150 | CSLB1 | Cellulose synthase | 10.2.1 cell wall.cellulose synthesis.cellulose synthase | 2 | 0.108978495788022 | 847 | 865 | 856 | -30.4 | -22.1 | 0.7269736842105261 | 3 |
| vsiRNA35127 | Sotub03g036750 | Sotub03g036750 | Sotub03g036750.1.1 | Glycine-rich protein-like | 27.3.39 RNA.regulation of transcription.AtSR transcription factor family | 30.5 signalling.G-proteins | 1 | 0.14456782323043701 | 215 | 236 | 226 | -28.9 | -19 | 0.6574394463667821 | 1 |
| vsiRNA35127 | Sotub09g027300 | Sotub09g027300 | T6G15.140 | Predicted membrane protein (Fragment) | 29.2.2 protein.synthesis.ribosome biogenesis | 1 | 0.0346036292134965 | 749 | 767 | 759 | -28.9 | -21.4 | 0.7404844290657441 | 2 |
| vsiRNA35127 | Sotub02g005270 | Sotub02g005270 | NUCL1 | Polyadenylate-binding protein 1 | 27.4 RNA.RNA binding | 29.2.6 protein.synthesis.ribosomal RNA | 30.5 signalling.G-proteins | 2 | 0.248689813368543 | 1667 | 1687 | 1677 | -28.9 | -21.6 | 0.747404844290658 | 1 |
| vsiRNA35160 | Sotub10g007190 | Sotub10g007190 | ATHM2 | Thioredoxin m | 21.1 redox.thioredoxin | 2 | 0.12960282113444302 | 289 | 313 | 304 | -36.5 | -24.92 | 0.6827397260273971 | 3 |
| vsiRNA35172 | Sotub08g023430 | Sotub08g023430 | LIL3:1 | Light harvesting-like protein 3 | 27.3.23 RNA.regulation of transcription.heat-shock transcription factor family (HSF) | 2 | 0.27479987447908705 | 162 | 181 | 172 | -32.2 | -21 | 0.652173913043478 | 3 |
| vsiRNA35205 | Sotub12g028460 | Sotub12g028460 | PAM68 | ABC-type Co2+ transport system permease component | 35.2 not assigned.unknown | 2 | 0.174461574088583 | 410 | 430 | 421 | -30.5 | -20 | 0.6557377049180331 | 1 |
| vsiRNA35243 | Sotub04g031080 | Sotub04g031080 | ACBP3 | Acyl-CoA-binding domain-containing protein 6 | 11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein | 2 | 0.33867579720905305 | 244 | 265 | 254 | -27.5 | -18.4 | 0.6690909090909091 | 1 |
| vsiRNA35243 | Sotub08g028170 | Sotub08g028170 | Sotub08g028170.1.1 | Unknown Protein | 26.10 misc.cytochrome P450 | 3 | 0.0975966957393466 | 460 | 479 | 470 | -27.5 | -19.8 | 0.72 | 2 |
| vsiRNA35247 | Sotub01g044620 | Sotub01g044620 | Sotub01g044620.1.1 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.00141999115323088 | 85 | 104 | 95 | -32.4 | -28.3 | 0.8734567901234571 | 2 |
| vsiRNA35247 | Sotub04g034700 | Sotub04g034700 | LQY1 | Unknown Protein | 20.2.1 stress.abiotic.heat | 29.6 protein.folding | 2 | 0.0946286559693177 | 128 | 148 | 138 | -32.4 | -22.1 | 0.682098765432099 | 2 |
| vsiRNA35260 | Sotub07g018820 | Sotub07g018820 | (ET):ACO | 1-aminocyclopropane-1-carboxylate oxidase | 17.5.1.2 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase | 31.1 cell.organisation | 2 | 0.37636994630695303 | 886 | 906 | 896 | -29.9 | -20.6 | 0.688963210702341 | 1 |
| vsiRNA35260 | Sotub02g034600 | Sotub02g034600 | MIJ24_40 | Latex abundant protein 1 | 26.27 misc.calcineurin-like phosphoesterase family protein | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 2 | 0.45613005401258405 | 604 | 622 | 614 | -29.9 | -20.8 | 0.695652173913044 | 3 |
| vsiRNA35260 | Sotub06g027390 | Sotub06g027390 | Sotub06g027390.1.1 | Cysteine proteinase inhibitor | 29.5.3 protein.degradation.cysteine protease | 29.5.15 protein.degradation.inhibitors | 3 | 0.265360800999979 | 1136 | 1160 | 1146 | -29.9 | -19.6 | 0.65551839464883 | 0 |
| vsiRNA35265 | Sotub01g042070 | Sotub01g042070 | F17M5.260 | Phosphatase PTC7 homolog | 26.13 misc.acid and other phosphatases | 29.4 protein.postranslational modification | 2 | 0.224683267570347 | 551 | 574 | 561 | -35.4 | -23.2 | 0.655367231638418 | 2 |
| vsiRNA35276 | PGSC0003DMC400059239 | PGSC0003DMG400037135 | PGSC0003DMG400037135 | Conserved gene of unknown function | 13.1.6.1.6 amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase | 0 | 0.069676208174309 | 148 | 168 | 159 | -27.2 | -17.8 | 0.654411764705882 | 2 |
| vsiRNA35276 | Sotub10g006560 | Sotub10g006560 | PCAP1 | Salt stress root protein RS1 | 20.2.3 stress.abiotic.drought/salt | 30.4 signalling.phosphinositides | 2 | 0.22831305119385803 | 187 | 208 | 200 | -27.2 | -18.3 | 0.6727941176470591 | 1 |
| vsiRNA35279 | Sotub03g005980 | Sotub03g005980 | Sotub03g005980.1.1 | Chlorophyll a-b binding protein 3C-like | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.0578932222787371 | 559 | 586 | 577 | -32.4 | -22.4 | 0.6913580246913581 | 1 |
| vsiRNA35286 | Sotub04g006800 | Sotub04g006800 | C2H2 | C2H2L domain class transcription factor | 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family | 2 | 0.17434442867157202 | 1199 | 1221 | 1210 | -29.9 | -21.1 | 0.7056856187290971 | 1 |
| vsiRNA35286 | Sotub11g009230 | Sotub11g009230 | GRF6 | GF14 protein | 15.2 metal handling.binding, chelation and storage | 30.7 signalling.14-3-3 proteins | 2 | 0.374151899682834 | 278 | 297 | 287 | -29.9 | -19.6 | 0.65551839464883 | 2 |
| vsiRNA35301 | Sotub07g020570 | Sotub07g020570 | T1E3_30 | Enhancer of polycomb homolog 1 | 35.2 not assigned.unknown | 0 | 0.0557430636147973 | 740 | 759 | 750 | -27.5 | -18.6 | 0.6763636363636361 | 3 |
| vsiRNA35303 | Sotub04g009990 | Sotub04g009990 | THA1 | L-threonine aldolase | 13.1.5.2 amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine | 13.2.5.2 amino acid metabolism.degradation.serine-glycine-cysteine group.glycine | 0 | 0.0154447015404005 | 103 | 124 | 115 | -34.4 | -24.1 | 0.700581395348837 | 1 |
| vsiRNA35303 | Sotub06g011450 | Sotub06g011450 | Sotub06g011450.1.1 | Homeobox-leucine zipper protein ROC7 | 35.2 not assigned.unknown | 0 | 0.0109695773647451 | 195 | 215 | 206 | -34.4 | -24.4 | 0.709302325581395 | 2 |
| vsiRNA35303 | Sotub11g020190 | Sotub11g020190 | NLP8 | Nodule inception protein (Fragment) | 27.3.60 RNA.regulation of transcription.NIN-like bZIP-related family | 33.99 development.unspecified | 0 | 0.0131490105930021 | 412 | 432 | 423 | -34.4 | -24.2 | 0.7034883720930231 | 2 |
| vsiRNA35303 | PGSC0003DMC400013227 | PGSC0003DMG401007461 | PGSC0003DMG401007461 | NRC1 | 20.1.2 stress.biotic.receptors | 20.1.7 stress.biotic.PR-proteins | 0 | 0.0163439434315953 | 636 | 657 | 648 | -34.4 | -24.18 | 0.702906976744186 | 3 |
| vsiRNA35303 | Sotub08g019460 | Sotub08g019460 | PARP2 | Novel protein similar to vertebrate ADP-ribosyltransferase (NAD+ poly (ADP-ribose) polymerase) (ADPRT) | 20.2.1 stress.abiotic.heat | 28.2 DNA.repair | 29.4 protein.postranslational modification | 0 | 0.0557430636147973 | 1166 | 1188 | 1179 | -34.4 | -22.4 | 0.651162790697674 | 3 |
| vsiRNA35303 | Sotub05g019090 | Sotub05g019090 | T6G15.50 | Homology to unknown gene | 35.2 not assigned.unknown | 3 | 0.18047902260140603 | 106 | 125 | 116 | -34.4 | -22.4 | 0.651162790697674 | 1 |
| vsiRNA35303 | Sotub11g018810 | Sotub11g018810 | Sotub11g018810.1.1 | LysM domain containing protein expressed | 35.1 not assigned.no ontology | 3 | 0.0553964198224211 | 8 | 33 | 24 | -34.4 | -23.5 | 0.683139534883721 | 1 |
| vsiRNA35315 | Sotub04g006120 | Sotub04g006120 | Sotub04g006120.1.1 | cDNA clone J100026I16 full insert sequence | 35.2 not assigned.unknown | 2 | 0.702009500349915 | 385 | 405 | 396 | -30.7 | -20.1 | 0.654723127035831 | 2 |
| vsiRNA35315 | Sotub04g025090 | Sotub04g025090 | ndhM | NAD(P)H-quinone oxidoreductase subunit M | 1.1.6 PS.lightreaction.NADH DH | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 | 0.7421403586986841 | 49 | 68 | 60 | -30.7 | -20.4 | 0.6644951140065151 | 3 |
| vsiRNA35338 | Sotub03g034060 | Sotub03g034060 | GLUTRBP | Pyridoxamine 5'-phosphate oxidase-related FMN-binding | 11.1.30 lipid metabolism.FA synthesis and FA elongation.pyruvate kinase | 1 | 0.0143363044000302 | 719 | 738 | 729 | -31.1 | -20.5 | 0.6591639871382641 | 3 |
| vsiRNA35344 | Sotub02g029110 | Sotub02g029110 | RBCS-1A | Ribulose bisphosphate carboxylase small chain | 1.3.2 PS.calvin cycle.rubisco small subunit | 26.10 misc.cytochrome P450 | 34.3 transport.amino acids | 3 | 0.0860590875447622 | 367 | 389 | 377 | -34.7 | -23.9 | 0.688760806916426 | 2 |
| vsiRNA35360 | Sotub01g017600 | Sotub01g017600 | EULS3 | Stress responsive protein | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.040006865371549696 | 852 | 870 | 862 | -32.1 | -23.4 | 0.7289719626168221 | 2 |
| vsiRNA35372 | Sotub01g032580 | Sotub01g032580 | LEA14 | Late embryogenesis abundant protein | 33.2 development.late embryogenesis abundant | 0 | 0.0731450900780277 | 4 | 25 | 16 | -25.7 | -19.1 | 0.743190661478599 | 3 |
| vsiRNA35372 | Sotub10g022380 | Sotub10g022380 | KFB39 | Kelch repeat-containing F-box-like | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 2 | 0.57195894459882 | 727 | 747 | 738 | -25.7 | -18.5 | 0.719844357976654 | 1 |
| vsiRNA35372 | Sotub09g009340 | Sotub09g009340 | HSP70-10 | heat shock protein | 10.3 cell wall.hemicellulose synthesis | 20.2.1 stress.abiotic.heat | 26.10 misc.cytochrome P450 | 29.6 protein.folding | 34.99 transport.misc | 3 | 0.44437864167282803 | 1711 | 1728 | 1719 | -25.7 | -17.3 | 0.673151750972763 | 2 |
| vsiRNA35390 | Sotub02g023810 | Sotub02g023810 | APR1 | Phosphoadenosine phosphosulfate reductase | 14.2 S-assimilation.APR | 2 | 0.0528785712836159 | 702 | 730 | 721 | -27.8 | -20.8 | 0.7482014388489211 | 0 |
| vsiRNA35393 | PGSC0003DMC400056574 | PGSC0003DMG400034470 | PGSC0003DMG400034470 | Glycine-rich protein 2 | 20.2.2 stress.abiotic.cold | 0 | 0.0321667268907404 | 264 | 283 | 274 | -36.1 | -25.2 | 0.6980609418282551 | 2 |
| vsiRNA35409 | Sotub01g047060 | Sotub01g047060 | RBG7 | Glycine-rich RNA-binding protein | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 3 | 0.093585436847451 | 203 | 232 | 223 | -33.8 | -22.4 | 0.6627218934911241 | 0 |
| vsiRNA35476 | Sotub08g020600 | Sotub08g020600 | CCD4 | 9-cis-epoxycarotenoid dioxygenase 1 | 17.1.1.1.10 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase | 2 | 0.0224794895034315 | 1202 | 1221 | 1212 | -35.6 | -26.4 | 0.7415730337078651 | 3 |
| vsiRNA35478 | Sotub06g018020 | Sotub06g018020 | PSAD2 | Photosystem I reaction center subunit II | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | 3 | 0.10197934765198301 | 397 | 423 | 414 | -29.9 | -20.1 | 0.6722408026755851 | 2 |
| vsiRNA35484 | Sotub06g032060 | Sotub06g032060 | Sotub06g032060.1.1 | Genomic DNA chromosome 5 BAC clone F2O15 | 35.2 not assigned.unknown | 1 | 0.177821251397263 | 114 | 132 | 123 | -32.9 | -21.5 | 0.6534954407294831 | 3 |
| vsiRNA35485 | MICRO.14645.C1 | MICRO.14645.C1 | MICRO.14645.C1 | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 1 | 0.0139289981778369 | 335 | 354 | 345 | -36.4 | -26 | 0.7142857142857141 | 2 |
| vsiRNA35489 | Sotub08g029270 | Sotub08g029270 | MURE | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2 6-diaminopimelate ligase | 33.99 development.unspecified | 2 | 0.028188737834143898 | 800 | 819 | 810 | -30.4 | -23.2 | 0.763157894736842 | 3 |
| vsiRNA35492 | Sotub01g030270 | Sotub01g030270 | ARGAH1 | Agmatinase | 13.2.2.3 amino acid metabolism.degradation.glutamate family.arginine | 2 | 0.130849725441212 | 548 | 567 | 558 | -35.4 | -24 | 0.677966101694915 | 2 |
| vsiRNA35492 | Sotub03g031780 | Sotub03g031780 | CLPB1 | ATP-dependent clp protease ATP-binding subunit | 20.2.1 stress.abiotic.heat | 29.5.5 protein.degradation.serine protease | 2 | 0.18465645738154202 | 2168 | 2192 | 2178 | -35.4 | -23.62 | 0.6672316384180791 | 2 |
| vsiRNA35492 | Sotub07g026110 | Sotub07g026110 | THI1 | Thiazole biosynthetic enzyme | 10.8.1 cell wall.pectinesterases.PME | 18.2 Co-factor and vitamine metabolism.thiamine | 2 | 0.00283796593158669 | 338 | 356 | 348 | -35.4 | -27.3 | 0.771186440677966 | 3 |
| vsiRNA35521 | Sotub07g014980 | Sotub07g014980 | ALEU | Cathepsin L-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 2 | 0.011372308067799 | 746 | 764 | 756 | -28.8 | -23.2 | 0.805555555555555 | 1 |
| vsiRNA35526 | Sotub02g009530 | Sotub02g009530 | KIWI | Activated RNA polymerase II transcriptional coactivator p15 | 27.3.50 RNA.regulation of transcription.general transcription | 2 | 0.33370987958486703 | 180 | 207 | 190 | -28.5 | -19.5 | 0.684210526315789 | 1 |
| vsiRNA35535 | Sotub04g028100 | Sotub04g028100 | UGT85A1 | UDP-glucuronosyltransferase | 17.4.1 hormone metabolism.cytokinin.synthesis-degradation | 26.2 misc.UDP glucosyl and glucoronyl transferases | 29.4 protein.postranslational modification | 2 | 0.197301099120402 | 1232 | 1253 | 1244 | -33.3 | -22.48 | 0.675075075075075 | 2 |
| vsiRNA35550 | Sotub11g008890 | Sotub11g008890 | UGT91A1 | UDP-glucosyltransferase | 16.8.1.12 secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase | 26.2 misc.UDP glucosyl and glucoronyl transferases | 2 | 0.48333834440451606 | 764 | 789 | 775 | -31.7 | -20.7 | 0.652996845425867 | 1 |
| vsiRNA35550 | Sotub02g030460 | Sotub02g030460 | BCAT3 | Branched-chain-amino-acid aminotransferase | 13.1.4.1.4 amino acid metabolism.synthesis.branched chain group.common.branched-chain-amino-acid aminotransferase | 16.5.1.1.1.1 secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT) | 18.4.1 Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase | 2 | 0.1861025552214 | 863 | 882 | 873 | -31.7 | -22.2 | 0.7003154574132491 | 2 |
| vsiRNA35550 | Sotub08g024120 | Sotub08g024120 | (JA):ACX | Acyl-coenzyme A oxidase | 11.9.4.2 lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH | 2 | 0.429337300101278 | 1379 | 1397 | 1388 | -31.7 | -21 | 0.6624605678233441 | 2 |
| vsiRNA35558 | Sotub06g032770 | Sotub06g032770 | PDX11 | Pyridoxal biosynthesis lyase pdxS | 17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated | 18 Co-factor and vitamine metabolism | 2 | 0.0331659629967465 | 475 | 496 | 487 | -40.6 | -29.4 | 0.7241379310344831 | 2 |
| vsiRNA35590 | Sotub02g026590 | Sotub02g026590 | STR15 | Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1 | 27.3.99 RNA.regulation of transcription.unclassified | 33.99 development.unspecified | 3 | 0.139580450818826 | 382 | 400 | 391 | -33.2 | -21.6 | 0.6506024096385541 | 3 |
| vsiRNA35599 | Sotub09g011600 | Sotub09g011600 | SQD2 | Glycosyl transferase group 1 family protein | 11.10.4 lipid metabolism.glycolipid synthesis.sulfolipid synthase | 27.3.39 RNA.regulation of transcription.AtSR transcription factor family | 2 | 0.19990964280608 | 973 | 996 | 987 | -36.1 | -24.3 | 0.6731301939058171 | 1 |
| vsiRNA35600 | Sotub02g027600 | Sotub02g027600 | FBA1 | Fructose-bisphosphate aldolase | 1.3.6 PS.calvin cycle.aldolase | 11.1.30 lipid metabolism.FA synthesis and FA elongation.pyruvate kinase | 2 | 0.0451057587246402 | 976 | 995 | 986 | -37.9 | -26.7 | 0.704485488126649 | 2 |
| vsiRNA35641 | Sotub08g022980 | Sotub08g022980 | dl4605c | Vacuolar protein sorting-associated protein | 18.7 Co-factor and vitamine metabolism.iron-sulphur clusters | 1 | 0.018313561390735398 | 9762 | 9780 | 9771 | -35.2 | -23.8 | 0.6761363636363641 | 2 |
| vsiRNA35647 | Sotub07g012380 | Sotub07g012380 | PRP40A | Pre-mRNA-processing factor 40 homolog A | 35.1 not assigned.no ontology | 2 | 0.35383109330364104 | 2427 | 2446 | 2437 | -29.5 | -20.3 | 0.688135593220339 | 2 |
| vsiRNA35647 | Sotub09g025050 | Sotub09g025050 | ndhN | NAD(P)H-quinone oxidoreductase subunit N | 1.1.6 PS.lightreaction.NADH DH | 1.1.40 PS.lightreaction.cyclic electron flow-chlororespiration | 2 | 0.7421403586986841 | 687 | 706 | 697 | -29.5 | -19.4 | 0.6576271186440681 | 3 |
| vsiRNA35657 | Sotub11g030170 | Sotub11g030170 | FAX2 | Transmembrane protein 14C | 16.2 secondary metabolism.phenylpropanoids | 21.1 redox.thioredoxin | 27.4 RNA.RNA binding | 28.1.3 DNA.synthesis/chromatin structure.histone | 29.4 protein.postranslational modification | 33.3 development.squamosa promoter binding like (SPL) | 2 | 0.13816123565100102 | 263 | 289 | 280 | -39 | -26.1 | 0.6692307692307691 | 1 |
| vsiRNA35657 | Sotub10g014540 | Sotub10g014540 | RBG8 | Glycine-rich RNA-binding protein | 17.2.2 hormone metabolism.auxin.signal transduction | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 3 | 0.028325130091438003 | 454 | 475 | 466 | -39 | -26.1 | 0.6692307692307691 | 3 |
| vsiRNA35662 | Sotub07g017980 | Sotub07g017980 | LHB1B1 | Chlorophyll a-b binding protein 4, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.183242066365388 | 96 | 114 | 106 | -33.1 | -21.9 | 0.6616314199395771 | 2 |
| vsiRNA35677 | Sotub06g025070 | Sotub06g025070 | WDL5 | Os02g0200800 protein (Fragment) | 31.1 cell.organisation | 33.99 development.unspecified | 0 | 0.00534319340417988 | 1346 | 1367 | 1356 | -33 | -23.96 | 0.7260606060606061 | 3 |
| vsiRNA35690 | Sotub01g006070 | Sotub01g006070 | SUB1 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.354340576204177 | 324 | 344 | 335 | -25.3 | -18.2 | 0.7193675889328061 | 2 |
| vsiRNA35694 | Sotub09g005160 | Sotub09g005160 | LHCB4.1 | Chlorophyll a-b binding protein 6, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 2 | 0.0998141364388908 | 226 | 245 | 236 | -31.3 | -22.6 | 0.7220447284345051 | 2 |
| vsiRNA35706 | Sotub07g006080 | Sotub07g006080 | RFC1 | DNA REPLICATION FACTOR C SUBUNIT | 29.5.9 protein.degradation.AAA type | 2 | 0.468453274458961 | 2927 | 2948 | 2937 | -32.2 | -21.6 | 0.670807453416149 | 3 |
| vsiRNA35715 | PGSC0003DMC400056415 | PGSC0003DMG400034313 | CMTA4 | Calmodulin-binding transcription activator (Camta), plants | 27.3.39 RNA.regulation of transcription.AtSR transcription factor family | 30.11 signalling.light | 0 | 0.00565660831279213 | 1694 | 1714 | 1705 | -29 | -22.9 | 0.789655172413793 | 1 |
| vsiRNA35715 | Sotub08g007680 | Sotub08g007680 | Sotub08g007680.1.1 | Zinc finger family protein | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 2 | 0.590214917113108 | 723 | 742 | 733 | -29 | -19.4 | 0.6689655172413791 | 3 |
| vsiRNA35758 | Sotub03g026720 | Sotub03g026720 | Sotub03g026720.1.1 | Unknown Protein | 35.2 not assigned.unknown | 1 | 0.0237185651902664 | 505 | 524 | 515 | -34.5 | -23 | 0.6666666666666671 | 2 |
| vsiRNA35758 | Sotub01g031940 | Sotub01g031940 | BES1 | Beta-amylase 9 | 2.2.2.1.2 major CHO metabolism.degradation.starch.starch cleavage.beta amylase | 3.5 minor CHO metabolism.others | 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/ethylene-responsive element binding protein family | 29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V | 2 | 0.17592575363012503 | 535 | 561 | 551 | -34.5 | -23.2 | 0.6724637681159421 | 0 |
| vsiRNA35793 | Sotub09g020320 | Sotub09g020320 | SULTR1;1 | High affinity sulfate transporter 1 | 16.1.3.3 secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase | 30.11 signalling.light | 31.4 cell.vesicle transport | 34.6 transport.sulphate | 0 | 0.0351667503069982 | 1684 | 1703 | 1694 | -35.3 | -24.5 | 0.694050991501416 | 1 |
| vsiRNA35799 | Sotub09g016160 | Sotub09g016160 | TIC110 | Tic110 family transporter chloroplast inner envelope protein Tic110 | 29.3.3 protein.targeting.chloroplast | 2 | 0.63125550711405 | 2932 | 2952 | 2943 | -32.7 | -21.8 | 0.6666666666666671 | 2 |
| vsiRNA35799 | Sotub03g029380 | Sotub03g029380 | LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.2.1 PS.lightreaction.photosystem I.LHC-I | 3 | 0.30480052400161 | 459 | 481 | 470 | -32.7 | -21.8 | 0.6666666666666671 | 0 |
| vsiRNA35804 | Sotub10g011300 | Sotub10g011300 | FD1 | Ferredoxin I | 1.1.5.2 PS.lightreaction.other electron carrier (ox/red).ferredoxin | 21.2.2 redox.ascorbate and glutathione.glutathione | 26.30 misc.other Ferredoxins and Rieske domain | 2 | 0.5522329115817091 | 142 | 164 | 154 | -29.7 | -19.4 | 0.653198653198653 | 1 |
| vsiRNA35844 | Sotub08g009120 | Sotub08g009120 | PSAN | Photosystem I reaction center subunit | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | 3 | 0.036376326758131 | 17 | 37 | 28 | -36.4 | -25.9 | 0.711538461538462 | 3 |
| vsiRNA35848 | SDBN001J23u.scf | SDBN001J23u.scf | SDBN001J23u.scf | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 0 | 0.0202762479100587 | 3 | 23 | 13 | -36.6 | -25.8 | 0.704918032786885 | 2 |
| vsiRNA35852 | Sotub07g024360 | Sotub07g024360 | RPS20 | 30S ribosomal protein S20 | 29.2.1.1.1.1.20 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S20 | 2 | 0.36168321407846 | 179 | 199 | 189 | -29.5 | -19.6 | 0.664406779661017 | 3 |
| vsiRNA35855 | Sotub07g009770 | Sotub07g009770 | ACA1 | Calcium-transporting ATPase 1 | 27.3.99 RNA.regulation of transcription.unclassified | 29.8 protein.assembly and cofactor ligation | 30.3 signalling.calcium | 34.21 transport.calcium | 2 | 0.19900256364162502 | 1001 | 1019 | 1011 | -28 | -18.5 | 0.660714285714286 | 2 |
| vsiRNA35863 | Sotub01g011250 | Sotub01g011250 | atpB | ATP synthase subunit beta chloroplastic | 1.1.4.2 PS.lightreaction.ATP synthase.beta subunit | 1.1.4.3 PS.lightreaction.ATP synthase.epsilon chain | 9.9 mitochondrial electron transport / ATP synthesis.F1-ATPase | 1 | 0.0332110507416428 | 171 | 191 | 182 | -31.4 | -21.8 | 0.6942675159235671 | 3 |
| vsiRNA35868 | Sotub10g012890 | Sotub10g012890 | Sotub10g012890.1.1 | Unknown Protein | 35.1 not assigned.no ontology | 1 | 0.299602057052542 | 216 | 234 | 226 | -28.3 | -18.5 | 0.6537102473498231 | 3 |
| vsiRNA35868 | Sotub07g010540 | Sotub07g010540 | AHA1 | Plasma membrane ATPase 4 | 2.2.1.3.1 major CHO metabolism.degradation.sucrose.invertases.neutral | 19.4 tetrapyrrole synthesis.ALA dehydratase | 34.1.2 transport.p- and v-ATPases.H+exporting ATPase | 2 | 0.26833441881645803 | 1242 | 1265 | 1252 | -28.3 | -21.5 | 0.759717314487632 | 1 |
| vsiRNA35868 | Sotub08g024460 | Sotub08g024460 | dl4305c | Aspartic proteinase nepenthesin-2 | 27.3.99 RNA.regulation of transcription.unclassified | 29.5.4 protein.degradation.aspartate protease | 2 | 0.905914530673606 | 1103 | 1123 | 1114 | -28.3 | -18.8 | 0.6643109540636041 | 2 |
| vsiRNA35868 | Sotub07g017790 | Sotub07g017790 | HPD | p-hydroxyphenylpyruvate dioxygenase | 13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine | 16.1.3.1 secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase | 2 | 0.386652795860192 | 800 | 820 | 811 | -28.3 | -20.6 | 0.72791519434629 | 3 |
| vsiRNA35868 | Sotub01g048700 | Sotub01g048700 | Sotub01g048700.1.1 | Cold shock protein-1 | 20.2.2 stress.abiotic.cold | 27.3.75 RNA.regulation of transcription.GRP | 30.2.11 signalling.receptor kinases.leucine rich repeat XI | 30.2.12 signalling.receptor kinases.leucine rich repeat XII | 3 | 0.20441599470670702 | 174 | 196 | 187 | -28.3 | -21.3 | 0.752650176678445 | 1 |
| vsiRNA35884 | Sotub07g022020 | Sotub07g022020 | GRF9 | 14-3-3-like protein GF14 Epsilon | 30.7 signalling.14-3-3 proteins | 2 | 0.025405996422027798 | 229 | 249 | 240 | -28.8 | -22 | 0.7638888888888891 | 3 |
| vsiRNA35884 | Sotub09g007400 | Sotub09g007400 | CP29B | RNA-binding protein | 27.3.99 RNA.regulation of transcription.unclassified | 27.4 RNA.RNA binding | 3 | 0.29784790395758104 | 409 | 427 | 418 | -28.8 | -18.8 | 0.652777777777778 | 3 |
| vsiRNA35886 | Sotub01g007480 | Sotub01g007480 | F26K24.7 | Phosphatidylglycerol / phosphatidylinositol transfer protein | 13.1.4.1 amino acid metabolism.synthesis.branched chain group.common | 2 | 0.34128713609675804 | 182 | 201 | 192 | -32.1 | -21.4 | 0.6666666666666671 | 3 |
| vsiRNA35886 | Sotub10g010830 | Sotub10g010830 | LTP1 | Non-specific lipid-transfer protein | 11.6 lipid metabolism.lipid transfer proteins etc | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 | 0.12129937653097801 | 11 | 30 | 21 | -32.1 | -21.8 | 0.679127725856698 | 3 |
| vsiRNA35886 | Sotub10g010840 | Sotub10g010840 | Sotub10g010840.1.1 | Non-specific lipid-transfer protein | 35.2 not assigned.unknown | 2 | 0.12379309896444701 | 11 | 30 | 21 | -32.1 | -21.8 | 0.679127725856698 | 3 |
| vsiRNA35900 | Sotub07g025750 | Sotub07g025750 | Sotub07g025750.1.1 | Glutathione transferase | 26.9 misc.glutathione S transferases | 2 | 0.0134043439821725 | 389 | 408 | 399 | -32.8 | -26.1 | 0.7957317073170731 | 2 |
| vsiRNA35900 | Sotub07g022420 | Sotub07g022420 | FTSH1 | ATP-dependent zinc metalloprotease FtsH 4 | 29.5.7 protein.degradation.metalloprotease | 31.2 cell.division | 3 | 0.0831517098213524 | 305 | 333 | 315 | -32.8 | -23 | 0.701219512195122 | 1 |
| vsiRNA35900 | Sotub10g021350 | Sotub10g021350 | Sotub10g021350.1.1 | HAD-superfamily hydrolase | 35.1 not assigned.no ontology | 3 | 0.125806522563007 | 805 | 823 | 814 | -32.8 | -21.4 | 0.652439024390244 | 2 |
| vsiRNA35906 | Sotub02g020990 | Sotub02g020990 | T6H20.40 | Protein-tyrosine kinase 6 | 10.3 cell wall.hemicellulose synthesis | 29.4 protein.postranslational modification | 0 | 0.0342566153130131 | 970 | 990 | 981 | -33.2 | -21.7 | 0.6536144578313251 | 3 |
| vsiRNA35907 | Sotub01g040390 | Sotub01g040390 | HSP70-10 | Chaperone DnaK | 20.2.1 stress.abiotic.heat | 2 | 0.294495938538872 | 917 | 936 | 927 | -31.4 | -22.4 | 0.713375796178344 | 2 |
| vsiRNA35907 | Sotub11g017220 | Sotub11g017220 | T5L19.210 | Unknown Protein | 29.4 protein.postranslational modification | 34.22 transport.cyclic nucleotide or calcium regulated channels | 2 | 0.335612326248561 | 609 | 630 | 621 | -31.4 | -22.3 | 0.7101910828025481 | 2 |
| vsiRNA35911 | Sotub09g021600 | Sotub09g021600 | F15K9.5 | BSD domain containing 1 | 35.1.8 not assigned.no ontology.BSD domain-containing protein | 2 | 0.8485018847595821 | 1459 | 1478 | 1469 | -23.4 | -15.3 | 0.6538461538461541 | 2 |
| vsiRNA35912 | Sotub01g037690 | Sotub01g037690 | RPL18B | Ribosomal protein L18 | 29.2.1.2.2.18 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18 | 29.2.2 protein.synthesis.ribosome biogenesis | 3 | 0.18480568830569602 | 451 | 472 | 461 | -30 | -20.48 | 0.6826666666666671 | 2 |
| vsiRNA35924 | CN516737 | CN516737 | CN516737 | NA | 35.2 not assigned.unknown | 0 | 0.0217323464988302 | 261 | 279 | 270 | -41.8 | -29 | 0.69377990430622 | 3 |
| vsiRNA35930 | Sotub05g013120 | Sotub05g013120 | AOR | Alcohol dehydrogenase zinc-containing | 26.7 misc.oxidases - copper, flavone etc | 2 | 0.260499739199192 | 423 | 444 | 435 | -34.4 | -22.9 | 0.6656976744186051 | 0 |
| vsiRNA35946 | Sotub01g033070 | Sotub01g033070 | UGT72B1 | UDP-glucosyltransferase | 16.8.3 secondary metabolism.flavonoids.dihydroflavonols | 16.10 secondary metabolism.simple phenols | 26.2 misc.UDP glucosyl and glucoronyl transferases | 2 | 0.0738638417416551 | 739 | 759 | 749 | -26.6 | -19.4 | 0.729323308270677 | 3 |
| vsiRNA35951 | Sotub04g031180 | Sotub04g031180 | StSN1 | Gibberellin-regulated family protein | 17.6.2 hormone metabolism.gibberelin.signal transduction | 17.6.3 hormone metabolism.gibberelin.induced-regulated-responsive-activated | 2 | 0.152821002081641 | 73 | 95 | 86 | -32.2 | -21.4 | 0.664596273291925 | 2 |
| vsiRNA35955 | Sotub06g006900 | Sotub06g006900 | ATL5 | 60S ribosomal protein L5-1 | 29.2.1.2.2.5 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.0028552827145458303 | 288 | 305 | 298 | -32.1 | -26.2 | 0.81619937694704 | 2 |
| vsiRNA35955 | Sotub09g018400 | Sotub09g018400 | PSAE1 | Photosystem I reaction center subunit IV A | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 3 | 0.125807508928202 | 280 | 299 | 289 | -32.1 | -21 | 0.654205607476635 | 2 |
| vsiRNA35965 | Sotub08g023640 | Sotub08g023640 | RABD2A | Ras-related protein Rab-1A | 30.5 signalling.G-proteins | 2 | 0.210297490384482 | 550 | 570 | 561 | -34.8 | -22.7 | 0.652298850574713 | 3 |
| vsiRNA35991 | Sotub05g009750 | Sotub05g009750 | RECG | ATP-dependent DNA helicase RECG-like | 28.99 DNA.unspecified | 0 | 0.272508498576435 | 1670 | 1688 | 1679 | -25 | -16.3 | 0.652 | 3 |
| vsiRNA35991 | Sotub01g021550 | Sotub01g021550 | OBGL | GTPase obg | 30.5 signalling.G-proteins | 2 | 0.8664119187979221 | 361 | 383 | 371 | -25 | -16.7 | 0.668 | 1 |
| vsiRNA35991 | Sotub06g032750 | Sotub06g032750 | CYP19-4 | Peptidyl-prolyl cis-trans isomerase | 29.4 protein.postranslational modification | 31.3.1 cell.cycle.peptidylprolyl isomerase | 2 | 0.9241614744527971 | 570 | 590 | 581 | -25 | -16.4 | 0.656 | 2 |
| vsiRNA35991 | Sotub08g005960 | Sotub08g005960 | RGGA | Nuclear RNA binding protein (Fragment) | 27.4 RNA.RNA binding | 2 | 0.9451008444620551 | 601 | 621 | 612 | -25 | -16.3 | 0.652 | 2 |
| vsiRNA36004 | Sotub06g018020 | Sotub06g018020 | PSAD2 | Photosystem I reaction center subunit II | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | 2 | 0.024546242206054298 | 72 | 92 | 82 | -32.8 | -25.3 | 0.771341463414634 | 2 |
| vsiRNA36005 | Sotub12g029690 | Sotub12g029690 | CTPA2 | Carboxyl-terminal processing protease | 29.5.5 protein.degradation.serine protease | 1 | 0.00861756035885031 | 1366 | 1388 | 1376 | -32.3 | -23.7 | 0.73374613003096 | 3 |
| vsiRNA36005 | Sotub02g036100 | Sotub02g036100 | BCA1 | Carbonic anhydrase | 8.3 TCA / organic transformation.carbonic anhydrases | 16.99 secondary metabolism.unspecified | 2 | 0.22556841497637603 | 782 | 800 | 792 | -32.3 | -22.1 | 0.68421052631579 | 3 |
| vsiRNA36029 | Sotub09g012890 | Sotub09g012890 | Sotub09g012890.1.1 | Glutathione S-transferase-like protein | 26.9 misc.glutathione S transferases | 28.1 DNA.synthesis/chromatin structure | 29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII | 33.99 development.unspecified | 34.13 transport.peptides and oligopeptides | 2 | 0.561966032739394 | 383 | 402 | 393 | -25.7 | -16.9 | 0.6575875486381321 | 2 |
| vsiRNA36030 | Sotub11g009370 | Sotub11g009370 | ATL54 | RING finger protein | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 2 | 0.218676177404436 | 992 | 1012 | 1003 | -31.5 | -22.2 | 0.704761904761905 | 2 |
| vsiRNA36035 | Sotub07g006290 | Sotub07g006290 | F17I23.10 | Plasma membrane protein 3 | 20.2.2 stress.abiotic.cold | 20.2.3 stress.abiotic.drought/salt | 2 | 0.08004771297089301 | 66 | 89 | 79 | -35.2 | -23.6 | 0.6704545454545451 | 0 |
| vsiRNA36042 | Sotub08g025450 | Sotub08g025450 | F16J13.60 | Unknown Protein | 35.2 not assigned.unknown | 0 | 0.0916451742762221 | 721 | 740 | 731 | -29 | -19.6 | 0.675862068965517 | 3 |
| vsiRNA36066 | Sotub05g025260 | Sotub05g025260 | SBPASE | Fructose-1 6-bisphosphatase class 1 | 1.3.9 PS.calvin cycle.sedoheptulose bisphosphatase | 13.2.3.2 amino acid metabolism.degradation.aspartate family.threonine | 26.8 misc.nitrilases, nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases | 2 | 0.286380437025518 | 787 | 807 | 798 | -37.1 | -24.5 | 0.660377358490566 | 3 |
| vsiRNA36066 | Sotub09g005160 | Sotub09g005160 | LHCB4.1 | Chlorophyll a-b binding protein 6, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 2 | 0.030778402566339003 | 690 | 712 | 700 | -37.1 | -26.5 | 0.7142857142857141 | 3 |
| vsiRNA36069 | Sotub03g019540 | Sotub03g019540 | CYT1 | Mannose-1-phosphate guanyltransferase | 10.1.1.1 cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose | 0 | 0.0757132313931066 | 757 | 776 | 767 | -33.4 | -22.6 | 0.676646706586826 | 3 |
| vsiRNA36069 | Sotub01g008440 | Sotub01g008440 | Sotub01g008440.1.1 | Alpha/beta superfamily hydrolase | 35.2 not assigned.unknown | 2 | 0.0843325429323489 | 946 | 965 | 956 | -33.4 | -24.4 | 0.730538922155689 | 3 |
| vsiRNA36069 | Sotub08g027220 | Sotub08g027220 | Sotub08g027220.1.1 | TPR repeat-containing protein | 35.2 not assigned.unknown | 3 | 0.154244354123124 | 160 | 182 | 169 | -33.4 | -22.1 | 0.6616766467065871 | 1 |
| vsiRNA36069 | Sotub03g033590 | Sotub03g033590 | F6D8.2 | Eukaryotic translation initiation factor 3 subunit 2 | 29.4 protein.postranslational modification | 33.99 development.unspecified | 3 | 0.0379110262292317 | 1023 | 1043 | 1033 | -33.4 | -24.4 | 0.730538922155689 | 2 |
| vsiRNA36075 | Sotub03g022610 | Sotub03g022610 | Sotub03g022610.1.1 | Erwinia induced protein 2 | 35.1 not assigned.no ontology | 1 | 0.018313561390735398 | 192 | 216 | 207 | -36 | -24.8 | 0.6888888888888891 | 1 |
| vsiRNA36100 | Sotub03g018070 | Sotub03g018070 | Sotub03g018070.1.1 | DNA helicase-like | 28.1 DNA.synthesis/chromatin structure | 2 | 0.202233273604424 | 1993 | 2016 | 2007 | -36.2 | -24.8 | 0.685082872928177 | 3 |
| vsiRNA36100 | Sotub06g033430 | Sotub06g033430 | Sotub06g033430.1.1 | 60S ribosomal protein L10-like protein | 29.2.1.2.2.10 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.010594559640563 | 199 | 220 | 211 | -36.2 | -28.7 | 0.7928176795580111 | 3 |
| vsiRNA36109 | Sotub01g043670 | Sotub01g043670 | PMDH1 | Malate dehydrogenase | 6.3 gluconeogenesis / glyoxylate cycle.malate dehydrogenase | 10.1.5 cell wall.precursor synthesis.UXS | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 3 | 0.0625394455243766 | 842 | 864 | 852 | -33.9 | -23.2 | 0.684365781710914 | 3 |
| vsiRNA36112 | Sotub02g017370 | Sotub02g017370 | LHB1B1 | Chlorophyll a-b binding protein 1B, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.0130156873528601 | 463 | 483 | 474 | -42.5 | -29.7 | 0.6988235294117651 | 1 |
| vsiRNA36124 | Sotub01g042410 | Sotub01g042410 | DJA5 | Chaperone protein dnaJ | 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose | 20.2.1 stress.abiotic.heat | 28.1 DNA.synthesis/chromatin structure | 29.2.2 protein.synthesis.ribosome biogenesis | 30.2.16 signalling.receptor kinases.Catharanthus roseus-like RLK1 | 33.1 development.storage proteins | 2 | 0.0816793454613802 | 590 | 609 | 600 | -27.4 | -18.9 | 0.68978102189781 | 3 |
| vsiRNA36130 | Sotub10g019470 | Sotub10g019470 | SUVH1 | Histone-lysine N-methyltransferase | 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family | 2 | 0.5312717977836491 | 615 | 635 | 626 | -30.2 | -20.6 | 0.6821192052980131 | 3 |
| vsiRNA36130 | Sotub01g047060 | Sotub01g047060 | RBG7 | Glycine-rich RNA-binding protein | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 3 | 0.00414614449460404 | 208 | 227 | 218 | -30.2 | -24.28 | 0.803973509933775 | 3 |
| vsiRNA36133 | Sotub03g012350 | Sotub03g012350 | Sotub03g012350.1.1 | Kunitz trypsin inhibitor 4 | 20.1.7.6.1 stress.biotic.PR-proteins.PR6 (proteinase inhibitors).trypsin inhibitor | 2 | 0.0017736055592148 | 331 | 352 | 343 | -31.4 | -25.4 | 0.808917197452229 | 2 |
| vsiRNA36133 | Sotub12g011240 | Sotub12g011240 | RH53 | ATP-dependent RNA helicase | 27.1.2 RNA.processing.RNA helicase | 29.2.3 protein.synthesis.initiation | 2 | 0.0565963245140149 | 765 | 784 | 775 | -31.4 | -21.2 | 0.67515923566879 | 3 |
| vsiRNA36139 | Sotub01g029360 | Sotub01g029360 | VAD1 | GRAM domain-containing protein | 20.1 stress.biotic | 1 | 0.00932805085864885 | 1163 | 1182 | 1173 | -28.2 | -19.1 | 0.677304964539007 | 2 |
| vsiRNA36149 | PGSC0003DMC400042249 | PGSC0003DMG400024428 | PGSC0003DMG400024428 | Conserved gene of unknown function | 11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein | 3 | 0.0841218619219697 | 431 | 448 | 438 | -34.5 | -23 | 0.6666666666666671 | 3 |
| vsiRNA36171 | Sotub07g022420 | Sotub07g022420 | FTSH1 | ATP-dependent zinc metalloprotease FtsH 4 | 29.5.7 protein.degradation.metalloprotease | 31.2 cell.division | 3 | 0.0101046898424237 | 1133 | 1154 | 1145 | -30.6 | -22.6 | 0.738562091503268 | 2 |
| vsiRNA36174 | Sotub12g025320 | Sotub12g025320 | ATPD | ATP synthase delta subunit | 1.1.4.7 PS.lightreaction.ATP synthase.delta chain | 2 | 0.23377317659144403 | 540 | 561 | 550 | -32 | -20.88 | 0.6525000000000001 | 3 |
| vsiRNA36177 | Sotub09g029310 | Sotub09g029310 | CCL | Light regulated protein-like protein | 30.11 signalling.light | 3 | 0.00162513236770301 | 118 | 139 | 129 | -36.3 | -28.2 | 0.776859504132231 | 1 |
| vsiRNA36188 | Sotub07g016920 | Sotub07g016920 | HVT1 | ATP-dependent RNA helicase A | 28.1 DNA.synthesis/chromatin structure | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 2 | 0.0848253623676724 | 2972 | 2991 | 2982 | -40.1 | -28 | 0.698254364089775 | 3 |
| vsiRNA36191 | Sotub04g015410 | Sotub04g015410 | PCMP-E12 | Potassium transporter family protein | 34.15 transport.potassium | 1 | 0.0292414088057145 | 2454 | 2473 | 2465 | -28.4 | -20.2 | 0.7112676056338031 | 2 |
| vsiRNA36191 | Sotub03g029450 | Sotub03g029450 | CHLP | Geranylgeranyl reductase | 16.1.1 secondary metabolism.isoprenoids.non-mevalonate pathway | 2 | 0.7564729378070021 | 1010 | 1028 | 1019 | -28.4 | -18.8 | 0.661971830985915 | 3 |
| vsiRNA36191 | Sotub07g025120 | Sotub07g025120 | RPL13 | 50S ribosomal protein L13 | 29.2.1.1.1.2.13 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.32775899916602 | 350 | 370 | 361 | -28.4 | -19.6 | 0.6901408450704231 | 3 |
| vsiRNA36191 | Sotub09g031260 | Sotub09g031260 | F11A17.9 | Ribosome biogenesis protein NSA2 | 29.2.1.2.1.8 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.5911983736874931 | 393 | 414 | 403 | -28.4 | -18.9 | 0.6654929577464791 | 3 |
| vsiRNA36198 | Sotub02g013860 | Sotub02g013860 | Sotub02g013860.1.1 | GPI transamidase component GAA1 | 29.4 protein.postranslational modification | 0 | 0.0482741578693318 | 496 | 513 | 506 | -29.7 | -21.5 | 0.723905723905724 | 2 |
| vsiRNA36198 | Sotub01g043670 | Sotub01g043670 | PMDH1 | Malate dehydrogenase | 6.3 gluconeogenesis / glyoxylate cycle.malate dehydrogenase | 10.1.5 cell wall.precursor synthesis.UXS | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.0501775698909019 | 589 | 611 | 599 | -29.7 | -23.44 | 0.789225589225589 | 1 |
| vsiRNA36198 | Sotub06g027390 | Sotub06g027390 | Sotub06g027390.1.1 | Cysteine proteinase inhibitor | 29.5.3 protein.degradation.cysteine protease | 29.5.15 protein.degradation.inhibitors | 2 | 0.6559207726687121 | 115 | 134 | 125 | -29.7 | -19.9 | 0.67003367003367 | 1 |
| vsiRNA36198 | Sotub10g028070 | Sotub10g028070 | RCA | Ribulose-1 5-bisphosphate carboxylase/oxygenase activase 1 | 1.3.13 PS.calvin cycle.rubisco interacting | 2 | 0.7870967505388181 | 606 | 631 | 616 | -29.7 | -20.06 | 0.675420875420875 | 1 |
| vsiRNA36198 | Sotub11g014000 | Sotub11g014000 | NIA1 | Nitrate reductase | 12.1.1 N-metabolism.nitrate metabolism.NR | 2 | 0.712817753628434 | 2484 | 2504 | 2495 | -29.7 | -19.4 | 0.653198653198653 | 2 |
| vsiRNA36198 | Sotub04g021060 | Sotub04g021060 | ABCF2 | ABC transporter ATP-binding protein | 34.16 transport.ABC transporters and multidrug resistance systems | 3 | 0.095683925691215 | 1431 | 1449 | 1441 | -29.7 | -22.2 | 0.7474747474747481 | 2 |
| vsiRNA36206 | Sotub09g031410 | Sotub09g031410 | SAD2 | Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7) | 29.3.1 protein.targeting.nucleus | 2 | 0.41079603202116105 | 2680 | 2700 | 2690 | -28.7 | -20.6 | 0.717770034843206 | 1 |
| vsiRNA36206 | Sotub10g027110 | Sotub10g027110 | NACA3 | Nascent polypeptide-associated complex alpha subunit-like protein | 29.2.4 protein.synthesis.elongation | 31.99 cell.unspecified | 2 | 0.232411777853457 | 91 | 111 | 101 | -28.7 | -20.8 | 0.7247386759581881 | 2 |
| vsiRNA36221 | Sotub01g045840 | Sotub01g045840 | PREP1 | Peptidase M16C associated | 29.5.7 protein.degradation.metalloprotease | 2 | 0.0663230732661977 | 1048 | 1068 | 1058 | -36.4 | -26.4 | 0.725274725274725 | 2 |
| vsiRNA36233 | PGSC0003DMC400060614 | PGSC0003DMG400038510 | PGSC0003DMG400038510 | Integrase core domain containing protein | 16.1.5 secondary metabolism.isoprenoids.terpenoids | 20.1.2 stress.biotic.receptors | 27.2 RNA.transcription | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 0 | 0.138529739636751 | 938 | 966 | 948 | -28.7 | -19.4 | 0.67595818815331 | 2 |
| vsiRNA36233 | Sotub12g014160 | Sotub12g014160 | SKIP35 | F-box/ankyrin repeat protein SKIP35 | 35.2 not assigned.unknown | 1 | 0.0213074392197563 | 23 | 42 | 33 | -28.7 | -21.6 | 0.7526132404181191 | 2 |
| vsiRNA36233 | Sotub02g021500 | Sotub02g021500 | Sotub02g021500.1.1 | Polyphenol oxidase | 16.10 secondary metabolism.simple phenols | 2 | 0.604119980856067 | 1796 | 1814 | 1806 | -28.7 | -19.3 | 0.6724738675958191 | 1 |
| vsiRNA36233 | Sotub01g032750 | Sotub01g032750 | BAG6 | BCL-2-associated athanogene 6 | 20.2.1 stress.abiotic.heat | 2 | 0.35840310694731103 | 2297 | 2318 | 2309 | -28.7 | -20.2 | 0.70383275261324 | 2 |
| vsiRNA36233 | Sotub10g013230 | Sotub10g013230 | Sotub10g013230.1.1 | Polyadenylate-binding protein, cytoplasmic and nuclear | 27.4 RNA.RNA binding | 2 | 0.140622028977572 | 383 | 402 | 393 | -28.7 | -22 | 0.7665505226480841 | 2 |
| vsiRNA36233 | Sotub01g009150 | Sotub01g009150 | RPT6A | 26S protease regulatory subunit 8 | 29.5.11.20 protein.degradation.ubiquitin.proteasom | 30.2.16 signalling.receptor kinases.Catharanthus roseus-like RLK1 | 2 | 0.12624034178422902 | 773 | 795 | 786 | -28.7 | -21.7 | 0.75609756097561 | 3 |
| vsiRNA36263 | Sotub05g026710 | Sotub05g026710 | dl3120w | Protein transport protein Sec23 | 29.3.4.2 protein.targeting.secretory pathway.golgi | 2 | 0.06898898485607101 | 463 | 490 | 473 | -32.6 | -24 | 0.7361963190184051 | 0 |
| vsiRNA36263 | Sotub02g016030 | Sotub02g016030 | DRT111 | Splicing factor 45 | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 28.2 DNA.repair | 2 | 0.3849749976308 | 594 | 613 | 604 | -32.6 | -21.5 | 0.659509202453988 | 2 |
| vsiRNA36268 | Sotub03g033170 | Sotub03g033170 | SCD1 | WD repeat-containing protein 5 homolog | 29.4 protein.postranslational modification | 30.1.1 signalling.in sugar and nutrient physiology.misc | 31.2 cell.division | 33.99 development.unspecified | 2 | 0.162654094777642 | 3304 | 3324 | 3315 | -34.8 | -23.6 | 0.67816091954023 | 1 |
| vsiRNA36268 | Sotub01g027880 | Sotub01g027880 | EMB2261 | Pentatricopeptide repeat-containing protein | 16.1.5 secondary metabolism.isoprenoids.terpenoids | 27.1 RNA.processing | 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family | 29.4 protein.postranslational modification | 30.3 signalling.calcium | 34.99 transport.misc | 2 | 0.0616377903836607 | 1021 | 1040 | 1031 | -34.8 | -25 | 0.7183908045977011 | 3 |
| vsiRNA36272 | Sotub12g026260 | Sotub12g026260 | TUBA1 | Tubulin alpha-5 chain | 2.2.1.3.1 major CHO metabolism.degradation.sucrose.invertases.neutral | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 29.5.15 protein.degradation.inhibitors | 31.1 cell.organisation | 34.13 transport.peptides and oligopeptides | 2 | 0.0501665281898594 | 1110 | 1129 | 1120 | -33.3 | -24.6 | 0.7387387387387391 | 3 |
| vsiRNA36291 | Sotub03g023220 | Sotub03g023220 | CP31A | RNA-binding protein | 27.3.99 RNA.regulation of transcription.unclassified | 27.4 RNA.RNA binding | 2 | 0.0447191222950679 | 226 | 244 | 236 | -28.2 | -22 | 0.7801418439716311 | 2 |
| vsiRNA36292 | Sotub01g042070 | Sotub01g042070 | F17M5.260 | Phosphatase PTC7 homolog | 26.13 misc.acid and other phosphatases | 29.4 protein.postranslational modification | 2 | 0.31045111518844304 | 205 | 224 | 215 | -34 | -22.6 | 0.664705882352941 | 3 |
| vsiRNA36303 | Sotub12g013560 | Sotub12g013560 | HSP90-1 | Heat shock protein 90 | 20.2.1 stress.abiotic.heat | 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family | 3 | 0.10068254126930101 | 1621 | 1642 | 1632 | -34.5 | -23.2 | 0.6724637681159421 | 1 |
| vsiRNA36313 | Sotub09g006570 | Sotub09g006570 | BASS3 | Bile acid sodium symporter family protein | 34.14 transport.unspecified cations | 2 | 0.307510576367912 | 1033 | 1057 | 1043 | -25.6 | -17.1 | 0.66796875 | 0 |
| vsiRNA36316 | Sotub03g012220 | Sotub03g012220 | HSP90-1 | Heat shock protein 90 (Fragment) | 20.2.1 stress.abiotic.heat | 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family | 1 | 0.0699548497845799 | 1504 | 1529 | 1520 | -31.2 | -21.2 | 0.67948717948718 | 2 |
| vsiRNA36317 | Sotub08g023430 | Sotub08g023430 | LIL3:1 | Light harvesting-like protein 3 | 27.3.23 RNA.regulation of transcription.heat-shock transcription factor family (HSF) | 2 | 0.26357821628384903 | 161 | 180 | 171 | -33.1 | -21.7 | 0.655589123867069 | 2 |
| vsiRNA36335 | Sotub01g035270 | Sotub01g035270 | RPL7AA | 60S ribosomal protein L7A-like protein | 29.2.1.2.2.57 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.040006865371549696 | 577 | 596 | 587 | -31.8 | -22.4 | 0.70440251572327 | 2 |
| vsiRNA36371 | Sotub01g031700 | Sotub01g031700 | CAC3 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha | 11.1.1.2.1 lipid metabolism.FA synthesis and FA elongation.acetyl CoA carboxylation.heteromeric complex.alpha carboxyltransferase | 16.99 secondary metabolism.unspecified | 27.3.44 RNA.regulation of transcription.chromatin remodeling factors | 2 | 0.32210608910273303 | 1681 | 1700 | 1691 | -23.7 | -15.6 | 0.658227848101266 | 3 |
| vsiRNA36376 | Sotub02g031970 | Sotub02g031970 | ZEP | Zeaxanthin epoxidase chloroplastic | 17.1.1.1.1 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase | 2 | 0.395981947816176 | 627 | 647 | 637 | -32.2 | -21.1 | 0.65527950310559 | 2 |
| vsiRNA36376 | Sotub08g008510 | Sotub08g008510 | CXIP4 | CAX-interacting protein 4 | 27.3.50 RNA.regulation of transcription.general transcription | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 34.21 transport.calcium | 2 | 0.30504761965306304 | 652 | 674 | 665 | -32.2 | -21.5 | 0.667701863354037 | 3 |
| vsiRNA36376 | Sotub08g017090 | Sotub08g017090 | HEMB1 | Delta-aminolevulinic acid dehydratase | 19.4 tetrapyrrole synthesis.ALA dehydratase | 29.4 protein.postranslational modification | 2 | 0.0685448240521518 | 423 | 445 | 436 | -32.2 | -23.1 | 0.717391304347826 | 3 |
| vsiRNA36412 | Sotub06g033410 | Sotub06g033410 | Sotub06g033410.1.1 | RNA-binding protein pno1 | 29.6 protein.folding | 2 | 0.129305456758942 | 406 | 427 | 416 | -23.6 | -15.8 | 0.669491525423729 | 2 |
| vsiRNA36421 | Sotub10g015940 | Sotub10g015940 | HAG1 | Histone acetyltransferase gcn5 | 27.3.54 RNA.regulation of transcription.histone acetyltransferases | 1 | 0.0315533014846993 | 465 | 485 | 476 | -36.4 | -23.9 | 0.656593406593407 | 3 |
| vsiRNA36421 | Sotub12g021940 | Sotub12g021940 | HSP70-14 | heat shock protein | 2.2.1.3.1 major CHO metabolism.degradation.sucrose.invertases.neutral | 20.2.1 stress.abiotic.heat | 2 | 0.21727579672264202 | 1413 | 1431 | 1422 | -36.4 | -23.8 | 0.6538461538461541 | 3 |
| vsiRNA36448 | Sotub07g017160 | Sotub07g017160 | PGM2 | Phosphoglucomutase | 4.1.2 glycolysis.cytosolic branch.phosphoglucomutase (PGM) | 4.2.2 glycolysis.plastid branch.phosphoglucomutase (PGM) | 2 | 0.0419837149561288 | 385 | 403 | 394 | -33.7 | -24.6 | 0.7299703264094961 | 2 |
| vsiRNA36458 | Sotub03g008590 | Sotub03g008590 | Sotub03g008590.1.1 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.248689813368543 | 521 | 542 | 531 | -42.2 | -27.8 | 0.658767772511848 | 1 |
| vsiRNA36466 | Sotub05g019090 | Sotub05g019090 | T6G15.50 | Homology to unknown gene | 35.2 not assigned.unknown | 3 | 0.0434912376081931 | 30 | 47 | 39 | -31.8 | -21.3 | 0.669811320754717 | 2 |
| vsiRNA36485 | Sotub02g019910 | Sotub02g019910 | Y-1 | Extra-large G-protein-like | 35.2 not assigned.unknown | 0 | 0.0345443909034016 | 483 | 502 | 493 | -34.9 | -24.9 | 0.7134670487106021 | 3 |
| vsiRNA36485 | Sotub06g012910 | Sotub06g012910 | Sotub06g012910.1.1 | At2g40630/T2P4.2 | 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family | 1 | 0.0389157364769066 | 967 | 988 | 979 | -34.9 | -24.6 | 0.70487106017192 | 2 |
| vsiRNA36493 | Sotub12g027890 | Sotub12g027890 | CAT1 | Catalase | 21.6 redox.dismutases and catalases | 3 | 0.0333109010143514 | 842 | 860 | 851 | -27 | -19 | 0.703703703703704 | 2 |
| vsiRNA36502 | Sotub11g007320 | Sotub11g007320 | GAD1 | Glutamate decarboxylase | 13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.glutamate decarboxylase | 2 | 0.0908153042845886 | 1145 | 1164 | 1155 | -25 | -18.6 | 0.744 | 3 |
| vsiRNA36531 | PGSC0003DMC400061622 | PGSC0003DMG400039518 | PGSC0003DMG400039518 | Gene of unknown function | 16.1.5 secondary metabolism.isoprenoids.terpenoids | 20.1.2 stress.biotic.receptors | 27.2 RNA.transcription | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 3 | 0.0547774482263292 | 3 | 23 | 14 | -30.6 | -21.8 | 0.712418300653595 | 0 |
| vsiRNA36559 | Sotub01g030960 | Sotub01g030960 | Sotub01g030960.1.1 | Ring H2 finger protein | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 1 | 0.009742107787092391 | 177 | 198 | 189 | -33.6 | -24.2 | 0.720238095238095 | 0 |
| vsiRNA36559 | Sotub03g024110 | Sotub03g024110 | Sotub03g024110.1.1 | Unknown Protein | 35.2 not assigned.unknown | 3 | 0.0021662560436817 | 452 | 470 | 462 | -33.6 | -25.9 | 0.770833333333333 | 2 |
| vsiRNA36563 | Sotub12g024160 | Sotub12g024160 | F11A12.5 | 6-phosphogluconate dehydrogenase decarboxylating | 7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase | 2 | 0.35985542032530504 | 196 | 216 | 207 | -34.8 | -22.9 | 0.658045977011494 | 1 |
| vsiRNA36563 | Sotub03g026680 | Sotub03g026680 | Sotub03g026680.1.1 | HPP | 35.1 not assigned.no ontology | 2 | 0.358022392760228 | 74 | 99 | 90 | -34.8 | -22.9 | 0.658045977011494 | 2 |
| vsiRNA36563 | Sotub11g020250 | Sotub11g020250 | F26A9.14 | Nuclear transport factor 2 (NTF2)-like protein | 29.3.1 protein.targeting.nucleus | 2 | 0.302519148068891 | 206 | 226 | 216 | -34.8 | -23.2 | 0.6666666666666671 | 2 |
| vsiRNA36593 | Sotub01g035320 | Sotub01g035320 | ZDS1 | Zeta-carotene desaturase | 16.1.4.3 secondary metabolism.isoprenoids.carotenoids.zeta-carotene desaturase | 2 | 0.09264224737568601 | 294 | 312 | 303 | -33.6 | -24.3 | 0.723214285714286 | 3 |
