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| vsiRNA33625 | Sotub07g026110 | Sotub07g026110 | THI1 | Thiazole biosynthetic enzyme | 10.8.1 cell wall.pectinesterases.PME | 18.2 Co-factor and vitamine metabolism.thiamine | 3 | 0.103623242380696 | 386 | 408 | 399 | -36.4 | -23.9 | 0.656593406593407 | 1 |
| vsiRNA33628 | Sotub07g016970 | Sotub07g016970 | PSBP1 | Oxygen-evolving enhancer protein 2, chloroplastic | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 34.19.3 transport.major intrinsic proteins.NIP | 2 | 0.18325217999588803 | 597 | 617 | 608 | -23.8 | -15.9 | 0.668067226890756 | 3 |
| vsiRNA33628 | Sotub11g024870 | Sotub11g024870 | Sotub11g024870.1.1 | Low molecular weight protein-tyrosine-phosphatase slr0328 | 29.4 protein.postranslational modification | 30.5 signalling.G-proteins | 2 | 0.15523993763052402 | 332 | 352 | 343 | -23.8 | -16.5 | 0.69327731092437 | 3 |
| vsiRNA33647 | Sotub04g035690 | Sotub04g035690 | FTSH1 | ATP-dependent zinc metalloprotease FtsH 1 | 29.5.7 protein.degradation.metalloprotease | 2 | 0.36520054349595704 | 1931 | 1953 | 1944 | -29.9 | -19.9 | 0.665551839464883 | 1 |
| vsiRNA33647 | Sotub02g005420 | Sotub02g005420 | HCF136 | Ycf48-like protein | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 29.8 protein.assembly and cofactor ligation | 2 | 0.30451065308913705 | 835 | 853 | 844 | -29.9 | -20.7 | 0.6923076923076921 | 3 |
| vsiRNA33664 | Sotub04g029110 | Sotub04g029110 | GATA | GATA transcription factor 25 | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.12073724975679301 | 288 | 309 | 298 | -31.3 | -25.68 | 0.8204472843450481 | 2 |
| vsiRNA33681 | Sotub01g017120 | Sotub01g017120 | psbB | Photosystem II CP47 chlorophyll apoprotein | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 29.5 protein.degradation | 2 | 0.159288780159482 | 965 | 985 | 975 | -32 | -22.1 | 0.6906249999999999 | 2 |
| vsiRNA33687 | Sotub07g009610 | Sotub07g009610 | Sotub07g009610.1.1 | Major latex-like protein | 20.2.99 stress.abiotic.unspecified | 1 | 0.014216056841372499 | 128 | 147 | 138 | -27.4 | -21 | 0.7664233576642341 | 3 |
| vsiRNA33687 | Sotub07g022020 | Sotub07g022020 | GRF9 | 14-3-3-like protein GF14 Epsilon | 30.7 signalling.14-3-3 proteins | 2 | 0.7125435559765061 | 707 | 728 | 719 | -27.4 | -18.7 | 0.6824817518248181 | 3 |
| vsiRNA33720 | Sotub10g009720 | Sotub10g009720 | CHLI1 | Magnesium chelatase ATPase subunit I | 19.10 tetrapyrrole synthesis.magnesium chelatase | 29.4 protein.postranslational modification | 2 | 0.252581165783606 | 678 | 702 | 688 | -33.5 | -21.8 | 0.650746268656716 | 1 |
| vsiRNA33722 | Sotub06g033810 | Sotub06g033810 | RIN4 | RPM1 interacting protein 4 transcript 2 | 20.1 stress.biotic | 30.1 signalling.in sugar and nutrient physiology | 1 | 0.0189192243924365 | 62 | 84 | 75 | -28.7 | -21 | 0.731707317073171 | 1 |
| vsiRNA33722 | Sotub01g047380 | Sotub01g047380 | RPT4A | 26S protease regulatory subunit | 3.4.5 minor CHO metabolism.myo-inositol.inositol phosphatase | 29.5.11.20 protein.degradation.ubiquitin.proteasom | 1 | 0.0261527685409233 | 635 | 654 | 645 | -28.7 | -20.1 | 0.700348432055749 | 3 |
| vsiRNA33725 | Sotub03g028750 | Sotub03g028750 | F13G24.170 | Genomic DNA chromosome 5 P1 clone MXM12 | 35.1 not assigned.no ontology | 1 | 0.0586085526603912 | 4999 | 5022 | 5009 | -30.1 | -20.9 | 0.6943521594684381 | 1 |
| vsiRNA33725 | Sotub05g010540 | Sotub05g010540 | AATP1 | AAA-ATPase | 11.3.2 lipid metabolism.phospholipid synthesis.choline kinase | 26.2 misc.UDP glucosyl and glucoronyl transferases | 29.5.9 protein.degradation.AAA type | 2 | 0.468429828792973 | 868 | 891 | 882 | -30.1 | -21 | 0.6976744186046511 | 0 |
| vsiRNA33725 | Sotub01g045840 | Sotub01g045840 | PREP1 | Peptidase M16C associated | 29.5.7 protein.degradation.metalloprotease | 2 | 0.187359164037663 | 2920 | 2939 | 2931 | -30.1 | -21.4 | 0.7109634551495021 | 1 |
| vsiRNA33725 | Sotub07g016970 | Sotub07g016970 | PSBP1 | Oxygen-evolving enhancer protein 2, chloroplastic | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 34.19.3 transport.major intrinsic proteins.NIP | 3 | 0.309339591661742 | 121 | 144 | 136 | -30.1 | -19.7 | 0.654485049833887 | 2 |
| vsiRNA33726 | Sotub02g017530 | Sotub02g017530 | CTPA1 | Carboxyl-terminal-processing protease | 29.5 protein.degradation | 0 | 0.0075373388280699505 | 619 | 639 | 629 | -33 | -23.7 | 0.718181818181818 | 3 |
| vsiRNA33764 | Sotub01g041200 | Sotub01g041200 | MEE9 | Unknown Protein | 35.2 not assigned.unknown | 1 | 0.0169863540973219 | 220 | 238 | 230 | -37.3 | -25.3 | 0.67828418230563 | 3 |
| vsiRNA33773 | Sotub12g009560 | Sotub12g009560 | F8F6.180 | F-box family protein | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 0 | 0.0391296101867601 | 890 | 913 | 904 | -28.4 | -19.1 | 0.6725352112676061 | 2 |
| vsiRNA33773 | Sotub07g025120 | Sotub07g025120 | RPL13 | 50S ribosomal protein L13 | 29.2.1.1.1.2.13 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.197618617113049 | 214 | 235 | 224 | -28.4 | -19.4 | 0.6830985915492961 | 1 |
| vsiRNA33783 | Sotub04g005340 | Sotub04g005340 | RPS9B | Ribosomal protein | 29.2.1.2.1.9 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9 | 29.2.2 protein.synthesis.ribosome biogenesis | 0 | 0.0348663468424455 | 544 | 566 | 554 | -34.4 | -22.5 | 0.6540697674418611 | 2 |
| vsiRNA33783 | Sotub03g029420 | Sotub03g029420 | Dof | Dof zinc finger protein | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.30847662043606905 | 609 | 629 | 620 | -34.4 | -22.4 | 0.651162790697674 | 3 |
| vsiRNA33783 | Sotub12g030760 | Sotub12g030760 | DGAT3 | Soluble diacylglycerol acyltransferase | 35.2 not assigned.unknown | 3 | 0.0604435867506121 | 794 | 812 | 804 | -34.4 | -22.5 | 0.6540697674418611 | 3 |
| vsiRNA33784 | Sotub11g014000 | Sotub11g014000 | NIA1 | Nitrate reductase | 12.1.1 N-metabolism.nitrate metabolism.NR | 2 | 0.07063947267912 | 2220 | 2244 | 2230 | -29.8 | -21.1 | 0.708053691275168 | 2 |
| vsiRNA33785 | Sotub04g035690 | Sotub04g035690 | FTSH1 | ATP-dependent zinc metalloprotease FtsH 1 | 29.5.7 protein.degradation.metalloprotease | 3 | 0.0881940445042668 | 916 | 935 | 926 | -32.2 | -21 | 0.652173913043478 | 2 |
| vsiRNA33794 | Sotub09g005850 | Sotub09g005850 | ANK1 | Ankyrin repeat family protein | 31.1 cell.organisation | 0 | 0.0111443896782691 | 1473 | 1493 | 1484 | -34.9 | -23.6 | 0.67621776504298 | 1 |
| vsiRNA33798 | Sotub01g047060 | Sotub01g047060 | RBG7 | Glycine-rich RNA-binding protein | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 2 | 0.16723140777255702 | 128 | 147 | 138 | -30.4 | -22.3 | 0.733552631578947 | 3 |
| vsiRNA33798 | Sotub10g009170 | Sotub10g009170 | Sotub10g009170.1.1 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.306496471799522 | 280 | 299 | 290 | -30.4 | -21.3 | 0.700657894736842 | 3 |
| vsiRNA33798 | Sotub10g014510 | Sotub10g014510 | RBG7 | RNA-binding glycine-rich protein-1b | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 2 | 0.1143690397518 | 131 | 150 | 141 | -30.4 | -22.3 | 0.733552631578947 | 3 |
| vsiRNA33801 | Sotub04g007790 | Sotub04g007790 | Sotub04g007790.1.1 | 1-aminocyclopropane-1-carboxylate oxidase | 17.5.1 hormone metabolism.ethylene.synthesis-degradation | 30.1 signalling.in sugar and nutrient physiology | 2 | 0.159675931285841 | 488 | 504 | 498 | -29 | -19.6 | 0.675862068965517 | 3 |
| vsiRNA33808 | Sotub04g005340 | Sotub04g005340 | RPS9B | Ribosomal protein | 29.2.1.2.1.9 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.32385978246247604 | 409 | 430 | 421 | -34.5 | -22.8 | 0.660869565217391 | 2 |
| vsiRNA33808 | Sotub10g021920 | Sotub10g021920 | Sotub10g021920.1.1 | 30S ribosomal protein S9-like | 29.2.1.1.1.1.9 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9 | 2 | 0.163932591782011 | 383 | 404 | 395 | -34.5 | -23.6 | 0.6840579710144931 | 2 |
| vsiRNA33811 | Sotub11g010760 | Sotub11g010760 | T32M21_60 | Protein neuralized (Fragment) | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 2 | 0.0921063385091575 | 55 | 75 | 67 | -30.9 | -21.5 | 0.6957928802589001 | 1 |
| vsiRNA33825 | Sotub01g032750 | Sotub01g032750 | BAG6 | BCL-2-associated athanogene 6 | 20.2.1 stress.abiotic.heat | 2 | 0.025253659409648 | 1400 | 1419 | 1410 | -28.1 | -21.3 | 0.7580071174377221 | 3 |
| vsiRNA33825 | Sotub08g012960 | Sotub08g012960 | RANBP1A | Ran GTPase binding protein | 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/ethylene-responsive element binding protein family | 30.5 signalling.G-proteins | 2 | 0.272467252846782 | 166 | 186 | 177 | -28.1 | -19.1 | 0.679715302491103 | 3 |
| vsiRNA33833 | Sotub11g023820 | Sotub11g023820 | HSP70-10 | heat shock protein | 10.3 cell wall.hemicellulose synthesis | 20.2.1 stress.abiotic.heat | 26.10 misc.cytochrome P450 | 29.6 protein.folding | 34.99 transport.misc | 2 | 0.5710318373885981 | 1558 | 1576 | 1567 | -30.4 | -20.6 | 0.677631578947368 | 3 |
| vsiRNA33840 | Sotub01g030740 | Sotub01g030740 | CPFTSY | Signal recognition particle-docking protein FtsY | 29.3.3 protein.targeting.chloroplast | 2 | 0.15604098227496802 | 970 | 990 | 980 | -27.9 | -20.2 | 0.724014336917563 | 3 |
| vsiRNA33840 | Sotub12g027890 | Sotub12g027890 | CAT1 | Catalase | 21.6 redox.dismutases and catalases | 3 | 0.0304564707811609 | 117 | 136 | 127 | -27.9 | -20.5 | 0.734767025089606 | 2 |
| vsiRNA33851 | Sotub04g028490 | Sotub04g028490 | T9I1.1 | Fam91a1 protein | 35.1 not assigned.no ontology | 1 | 0.139906991876839 | 2496 | 2516 | 2506 | -24.7 | -16.8 | 0.680161943319838 | 3 |
| vsiRNA33851 | Sotub07g016990 | Sotub07g016990 | PGM1 | 2 3-bisphosphoglycerate-independent phosphoglycerate mutase | 4.1.12 glycolysis.cytosolic branch.phosphoglycerate mutase | 2 | 0.0337304068047043 | 1137 | 1156 | 1147 | -24.7 | -20.5 | 0.8299595141700411 | 3 |
| vsiRNA33851 | Sotub10g022440 | Sotub10g022440 | Sotub10g022440.1.1 | Unknown Protein | 19.4 tetrapyrrole synthesis.ALA dehydratase | 2 | 0.19532103116256902 | 379 | 402 | 393 | -24.7 | -18.9 | 0.765182186234818 | 3 |
| vsiRNA33858 | PGSC0003DMC400024372 | PGSC0003DMG400013808 | FMO | Dimethylaniline monooxygenase | 26.2 misc.UDP glucosyl and glucoronyl transferases | 26.7 misc.oxidases - copper, flavone etc | 0 | 0.0245893404794444 | 345 | 368 | 355 | -25.6 | -17.2 | 0.671875 | 1 |
| vsiRNA33858 | Sotub07g026160 | Sotub07g026160 | CRR41 | Unknown Protein | 35.2 not assigned.unknown | 1 | 0.0189091867243525 | 357 | 376 | 367 | -25.6 | -17.2 | 0.671875 | 3 |
| vsiRNA33866 | Sotub09g021510 | Sotub09g021510 | F15K9.6 | mRNA clone RTFL01-07-P23 | 29.2.4 protein.synthesis.elongation | 2 | 0.0314481340228615 | 436 | 455 | 446 | -27.9 | -20.2 | 0.724014336917563 | 2 |
| vsiRNA33872 | Sotub12g027890 | Sotub12g027890 | CAT1 | Catalase | 21.6 redox.dismutases and catalases | 3 | 0.00506517290951347 | 675 | 694 | 684 | -33.5 | -25.9 | 0.773134328358209 | 1 |
| vsiRNA33876 | Sotub05g017640 | Sotub05g017640 | FC2 | Ferrochelatase | 19.20 tetrapyrrole synthesis.ferrochelatase | 2 | 0.48488911972049603 | 799 | 818 | 809 | -32.1 | -21.6 | 0.6728971962616821 | 1 |
| vsiRNA33881 | Sotub04g033600 | Sotub04g033600 | C7A10.720 | CRAL/TRIO domain containing protein expressed | 29.3.4.99 protein.targeting.secretory pathway.unspecified | 34.99 transport.misc | 2 | 0.335612326248561 | 141 | 160 | 151 | -33.7 | -23.2 | 0.6884272997032641 | 3 |
| vsiRNA33899 | Sotub07g028960 | Sotub07g028960 | ERF | Ethylene responsive transcription factor 3a | 17.5.2 hormone metabolism.ethylene.signal transduction | 20.1.5 stress.biotic.regulation of transcription | 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/ethylene-responsive element binding protein family | 1 | 0.14618849526222702 | 230 | 249 | 240 | -32.2 | -21.3 | 0.6614906832298141 | 2 |
| vsiRNA33899 | Sotub04g035580 | Sotub04g035580 | Sotub04g035580.1.1 | HLA-B associated transcript 3 (Fragment) | 29.2.3 protein.synthesis.initiation | 1 | 0.0026885942021822604 | 1867 | 1887 | 1877 | -32.2 | -26 | 0.8074534161490681 | 3 |
| vsiRNA33903 | Sotub02g005370 | Sotub02g005370 | GH9B10 | Endoglucanase 1 | 10.6.1 cell wall.degradation.cellulases and beta-1,4-glucanases | 26.3.4 misc.gluco-, galacto- and mannosidases.endoglucanase | 0 | 0.0719689820349291 | 1661 | 1680 | 1671 | -32.2 | -22.1 | 0.6863354037267081 | 3 |
| vsiRNA33919 | Sotub03g029780 | Sotub03g029780 | TCP | TCP family transcription factor | 17.2.2 hormone metabolism.auxin.signal transduction | 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated | 27.3.29 RNA.regulation of transcription.TCP transcription factor family | 1 | 0.0514922435062095 | 966 | 991 | 977 | -35.4 | -23.6 | 0.6666666666666671 | 0 |
| vsiRNA33919 | Sotub04g022750 | Sotub04g022750 | ATH13 | ABC-1 domain protein | 20.2 stress.abiotic | 2 | 0.269632104958731 | 162 | 181 | 172 | -35.4 | -23.8 | 0.6723163841807911 | 2 |
| vsiRNA33919 | Sotub02g026590 | Sotub02g026590 | STR15 | Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1 | 27.3.99 RNA.regulation of transcription.unclassified | 33.99 development.unspecified | 3 | 0.139580450818826 | 279 | 300 | 290 | -35.4 | -24.1 | 0.6807909604519781 | 2 |
| vsiRNA33933 | Sotub01g038660 | Sotub01g038660 | ARF1 | ADP-ribosylation factor | 29.3.4.99 protein.targeting.secretory pathway.unspecified | 29.4 protein.postranslational modification | 2 | 0.12960282113444302 | 70 | 94 | 84 | -32.6 | -22.4 | 0.687116564417178 | 1 |
| vsiRNA33957 | Sotub02g009250 | Sotub02g009250 | Sotub02g009250.1.1 | Mitochondrial transcription termination factor (Fragment) | 27.3.99 RNA.regulation of transcription.unclassified | 1 | 0.07238385826965 | 760 | 780 | 770 | -30 | -20.4 | 0.68 | 3 |
| vsiRNA33988 | Sotub07g027450 | Sotub07g027450 | PSBR | photosystem II polypeptide | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 3 | 0.0965738297902585 | 256 | 282 | 273 | -32.1 | -21.5 | 0.6697819314641741 | 0 |
| vsiRNA33991 | Sotub07g010470 | Sotub07g010470 | Sotub07g010470.1.1 | Ribosomal RNA processing protein 1 homolog B | 35.2 not assigned.unknown | 2 | 0.130736496625099 | 901 | 931 | 922 | -35.9 | -24.5 | 0.6824512534818941 | 1 |
| vsiRNA33992 | Sotub11g028680 | Sotub11g028680 | Sotub11g028680.1.1 | Aspartokinase/homoserine dehydrogenase | 13.1.3.6.1.1 amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase | 13.1.3.6.1.3 amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine dehydrogenase | 0 | 0.0031082021868333904 | 106 | 125 | 116 | -32.3 | -23.8 | 0.7368421052631581 | 3 |
| vsiRNA33996 | Sotub01g040390 | Sotub01g040390 | HSP70-10 | Chaperone DnaK | 20.2.1 stress.abiotic.heat | 3 | 0.061546432056363495 | 1698 | 1717 | 1707 | -31.5 | -20.8 | 0.66031746031746 | 3 |
| vsiRNA34015 | Sotub02g034080 | Sotub02g034080 | EXO70E1 | Exocyst complex component 7 | 27.3.99 RNA.regulation of transcription.unclassified | 31.4 cell.vesicle transport | 1 | 0.0112768459038453 | 161 | 180 | 171 | -33.1 | -24 | 0.7250755287009061 | 3 |
| vsiRNA34015 | Sotub02g031970 | Sotub02g031970 | ZEP | Zeaxanthin epoxidase chloroplastic | 17.1.1.1.1 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase | 3 | 0.0733934884997127 | 1240 | 1260 | 1250 | -33.1 | -23.4 | 0.706948640483384 | 3 |
| vsiRNA34023 | Sotub08g007770 | Sotub08g007770 | FKBP13 | Peptidyl-prolyl cis-trans isomerase | 29.6 protein.folding | 29.8 protein.assembly and cofactor ligation | 2 | 0.25655099513789204 | 580 | 600 | 591 | -32.4 | -21.5 | 0.66358024691358 | 2 |
| vsiRNA34023 | Sotub08g029090 | Sotub08g029090 | QQT2 | Gpn-loop GTPase 1 | 31.2 cell.division | 3 | 0.08523466292937101 | 810 | 830 | 821 | -32.4 | -21.7 | 0.6697530864197531 | 3 |
| vsiRNA34027 | Sotub04g012600 | Sotub04g012600 | CHLH | Magnesium chelatase H subunit | 16.2.1.10 secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD | 19.10 tetrapyrrole synthesis.magnesium chelatase | 2 | 0.15039514001072 | 3049 | 3069 | 3059 | -32.5 | -24.3 | 0.7476923076923081 | 1 |
| vsiRNA34027 | Sotub03g006550 | Sotub03g006550 | T3A5.70 | Acidic leucine-rich nuclear phosphoprotein 32 family member A | 35.1 not assigned.no ontology | 3 | 0.22273209899453902 | 592 | 612 | 602 | -32.5 | -22.5 | 0.6923076923076921 | 3 |
| vsiRNA34030 | PGSC0003DMC400048023 | PGSC0003DMG400027621 | PGSC0003DMG400027621 | Conserved gene of unknown function | 30.2.17 signalling.receptor kinases.DUF 26 | 0 | 0.0499759080765774 | 575 | 596 | 586 | -37.5 | -24.9 | 0.664 | 1 |
| vsiRNA34039 | Sotub10g022380 | Sotub10g022380 | KFB39 | Kelch repeat-containing F-box-like | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 3 | 0.049073782344876096 | 715 | 735 | 725 | -31.9 | -22.4 | 0.702194357366771 | 2 |
| vsiRNA34065 | Sotub06g032770 | Sotub06g032770 | PDX11 | Pyridoxal biosynthesis lyase pdxS | 17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated | 18 Co-factor and vitamine metabolism | 3 | 0.0995035613172228 | 452 | 471 | 461 | -39.1 | -26.2 | 0.6700767263427111 | 2 |
| vsiRNA34073 | Sotub07g022370 | Sotub07g022370 | DJC77 | Chaperone protein dnaJ 10 | 20.2.1 stress.abiotic.heat | 2 | 0.213096247758074 | 715 | 739 | 730 | -32.4 | -21.3 | 0.657407407407407 | 1 |
| vsiRNA34073 | Sotub08g007490 | Sotub08g007490 | WRKY | WRKY transcription factor 3 | 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family | 2 | 0.132952360693635 | 862 | 887 | 872 | -32.4 | -21.92 | 0.676543209876543 | 3 |
| vsiRNA34082 | Sotub04g008750 | Sotub04g008750 | GAPA1 | Glyceraldehyde-3-phosphate dehydrogenase | 1.3.4 PS.calvin cycle.GAP | 20.1 stress.biotic | 29.2.1.2.2.10 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.492429092812088 | 1021 | 1040 | 1031 | -32.3 | -21.2 | 0.656346749226006 | 1 |
| vsiRNA34092 | Sotub09g028330 | Sotub09g028330 | PTAC5 | Peptidoglycan binding domain containing protein | 21.2.2 redox.ascorbate and glutathione.glutathione | 2 | 0.0362718321538722 | 127 | 154 | 145 | -28.6 | -21.5 | 0.7517482517482521 | 0 |
| vsiRNA34109 | Sotub06g032860 | Sotub06g032860 | BRR2A | Related to ATP dependent RNA helicase | 27.1.2 RNA.processing.RNA helicase | 28.1 DNA.synthesis/chromatin structure | 3 | 0.0773091785905055 | 636 | 654 | 646 | -28.5 | -20.1 | 0.705263157894737 | 2 |
| vsiRNA34117 | Sotub02g021690 | Sotub02g021690 | Sotub02g021690.1.1 | p21-activated protein kinase-interacting protein 1-like | 35.1 not assigned.no ontology | 1 | 0.0208658483406777 | 400 | 420 | 410 | -32 | -23.5 | 0.734375 | 2 |
| vsiRNA34120 | Sotub06g018160 | Sotub06g018160 | StILR1 | Iaa-amino acid hydrolase 4 | 17.2.1 hormone metabolism.auxin.synthesis-degradation | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 0 | 0.0457919412498682 | 423 | 442 | 434 | -35 | -23 | 0.657142857142857 | 2 |
| vsiRNA34123 | Sotub09g016280 | Sotub09g016280 | STR4A | Rhodanese-like | 26.23 misc.rhodanese | 0 | 0.018731240103169 | 700 | 721 | 711 | -34.2 | -24.7 | 0.7222222222222221 | 2 |
| vsiRNA34135 | PGSC0003DMC400063472 | PGSC0003DMG400041368 | PGSC0003DMG400041368 | Polyprotein protein | 35.3 not assigned.disagreeing hits | 0 | 0.018731240103169 | 464 | 485 | 475 | -36.5 | -24.8 | 0.6794520547945211 | 0 |
| vsiRNA34147 | Sotub10g009470 | Sotub10g009470 | TPT | Glucose-6-phosphate/phosphate translocator 2 | 2.2.2.6 major CHO metabolism.degradation.starch.transporter | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 34.8 transport.metabolite transporters at the envelope membrane | 2 | 0.17851477668607402 | 553 | 575 | 565 | -31.7 | -21 | 0.6624605678233441 | 0 |
| vsiRNA34147 | Sotub04g023260 | Sotub04g023260 | SDC | Histidine decarboxylase | 11.3 lipid metabolism.phospholipid synthesis | 13.2.7 amino acid metabolism.degradation.histidine | 26.10 misc.cytochrome P450 | 29.5.11.20 protein.degradation.ubiquitin.proteasom | 2 | 0.130849725441212 | 355 | 375 | 365 | -31.7 | -21.2 | 0.668769716088328 | 3 |
| vsiRNA34161 | Sotub06g011130 | Sotub06g011130 | PRA1B1 | Prenylated rab acceptor family protein | 30.5 signalling.G-proteins | 31.4 cell.vesicle transport | 0 | 0.0094098930956199 | 16 | 37 | 26 | -42.3 | -29.4 | 0.695035460992908 | 2 |
| vsiRNA34179 | Sotub04g010270 | Sotub04g010270 | Sotub04g010270.1.1 | 2-oxoglutarate dehydrogenase E1 component | 8.1.5 TCA / organic transformation.TCA.2-oxoglutarate dehydrogenase | 11.1.2 lipid metabolism.FA synthesis and FA elongation.acetyl CoA transacylase | 1 | 0.0406351815427184 | 2761 | 2782 | 2771 | -31.3 | -22 | 0.7028753993610221 | 3 |
| vsiRNA34179 | Sotub04g031110 | Sotub04g031110 | F6H11.40 | Arginine N-methyltransferase 2 | 2.2.2.6 major CHO metabolism.degradation.starch.transporter | 31.1 cell.organisation | 2 | 0.38188073233506303 | 284 | 311 | 303 | -31.3 | -21 | 0.670926517571885 | 1 |
| vsiRNA34179 | Sotub02g026070 | Sotub02g026070 | HMGB1 | High mobility group protein | 27.3.53 RNA.regulation of transcription.high mobility group family (HMG) | 27.3.62 RNA.regulation of transcription.nucleosome/chromatin assembly factor group | 2 | 0.42300813686342303 | 219 | 239 | 230 | -31.3 | -20.6 | 0.65814696485623 | 2 |
| vsiRNA34179 | Sotub08g018640 | Sotub08g018640 | RD22 | BURP domain-containing protein | 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases | 20.2.3 stress.abiotic.drought/salt | 2 | 0.460392887504363 | 938 | 957 | 948 | -31.3 | -20.8 | 0.664536741214057 | 3 |
| vsiRNA34179 | Sotub11g023530 | Sotub11g023530 | DIT1 | 2-oxoglutarate/malate translocator | 29.2.2 protein.synthesis.ribosome biogenesis | 34.9 transport.metabolite transporters at the mitochondrial membrane | 2 | 0.432656145261662 | 1024 | 1044 | 1034 | -31.3 | -20.88 | 0.667092651757188 | 3 |
| vsiRNA34188 | Sotub10g018180 | Sotub10g018180 | CML42 | Calmodulin-like protein | 30.3 signalling.calcium | 2 | 0.5190528563734891 | 86 | 114 | 99 | -34.8 | -23.2 | 0.6666666666666671 | 0 |
| vsiRNA34193 | Sotub01g045470 | Sotub01g045470 | G2-like | Myb family transcription factor | 27.3.20 RNA.regulation of transcription.G2-like transcription factor family (GARP) | 1 | 0.17095103474227102 | 645 | 663 | 655 | -28.4 | -19.1 | 0.6725352112676061 | 3 |
| vsiRNA34196 | Sotub04g011820 | Sotub04g011820 | Sotub04g011820.1.1 | 60S ribosomal protein L6 | 29.2.1.2.2.6 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.0297272528846231 | 493 | 513 | 503 | -36.6 | -28.7 | 0.7841530054644811 | 1 |
| vsiRNA34196 | Sotub06g035000 | Sotub06g035000 | F4C21.10 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.774086039439365 | 327 | 347 | 338 | -36.6 | -23.8 | 0.650273224043716 | 3 |
| vsiRNA34198 | Sotub04g036500 | Sotub04g036500 | F14G6.20 | TMV response-related protein | 35.2 not assigned.unknown | 1 | 0.00743336096418301 | 444 | 464 | 455 | -31.6 | -23.2 | 0.7341772151898731 | 2 |
| vsiRNA34235 | Sotub01g032750 | Sotub01g032750 | BAG6 | BCL-2-associated athanogene 6 | 20.2.1 stress.abiotic.heat | 2 | 0.27666284388913404 | 3443 | 3462 | 3453 | -32.1 | -21.4 | 0.6666666666666671 | 3 |
| vsiRNA34235 | Sotub01g047060 | Sotub01g047060 | RBG7 | Glycine-rich RNA-binding protein | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 3 | 0.0495479059820219 | 323 | 344 | 333 | -32.1 | -23.1 | 0.719626168224299 | 1 |
| vsiRNA34238 | Sotub12g025320 | Sotub12g025320 | ATPD | ATP synthase delta subunit | 1.1.4.7 PS.lightreaction.ATP synthase.delta chain | 2 | 0.332850485973241 | 479 | 498 | 489 | -31.2 | -21.3 | 0.682692307692308 | 2 |
| vsiRNA34266 | Sotub04g035900 | Sotub04g035900 | Sotub04g035900.1.1 | Unknown Protein | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 0 | 0.0274474457600807 | 731 | 754 | 741 | -38.2 | -25.5 | 0.6675392670157071 | 3 |
| vsiRNA34320 | Sotub10g019430 | Sotub10g019430 | PAG1 | Proteasome subunit alpha type | 10.1.5 cell wall.precursor synthesis.UXS | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.5.11.20 protein.degradation.ubiquitin.proteasom | 1 | 0.129318029137431 | 628 | 657 | 641 | -32.2 | -21.1 | 0.65527950310559 | 0 |
| vsiRNA34320 | Sotub05g006510 | Sotub05g006510 | HSP90-1 | Chaperone protein htpG | 20.2.1 stress.abiotic.heat | 30.2.3 signalling.receptor kinases.leucine rich repeat III | 2 | 0.427404948205354 | 1810 | 1830 | 1821 | -32.2 | -22.3 | 0.692546583850932 | 2 |
| vsiRNA34320 | Sotub12g010120 | Sotub12g010120 | NAP1;1 | Nucleosome assembly protein 1-like protein 2 | 10.1.5 cell wall.precursor synthesis.UXS | 26.27 misc.calcineurin-like phosphoesterase family protein | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 28.1 DNA.synthesis/chromatin structure | 2 | 0.12073724975679301 | 975 | 993 | 984 | -32.2 | -24.3 | 0.7546583850931681 | 2 |
| vsiRNA34320 | Sotub10g022380 | Sotub10g022380 | KFB39 | Kelch repeat-containing F-box-like | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 3 | 0.164762994349612 | 613 | 633 | 624 | -32.2 | -21.4 | 0.664596273291925 | 2 |
| vsiRNA34321 | Sotub02g014610 | Sotub02g014610 | (ET):HMA | Copper-transporting ATPase | 34.12 transport.metal | 1 | 0.0490020953172949 | 2328 | 2350 | 2341 | -38.4 | -25.2 | 0.65625 | 2 |
| vsiRNA34327 | PGSC0003DMC400069100 | PGSC0003DMG400046996 | PGSC0003DMG400046996 | Gene of unknown function | 35.2 not assigned.unknown | 0 | 0.102175516720795 | 37 | 62 | 52 | -31.7 | -21.6 | 0.6813880126182971 | 0 |
| vsiRNA34327 | Sotub09g026230 | Sotub09g026230 | Sotub09g026230.1.1 | 1-aminocyclopropane-1-carboxylate oxidase-like protein | 17.5.1.2 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase | 21.2 redox.ascorbate and glutathione | 0 | 0.08935215385562109 | 928 | 948 | 938 | -31.7 | -21.8 | 0.687697160883281 | 1 |
| vsiRNA34327 | Sotub06g034690 | Sotub06g034690 | StGA1 | Ent-copalyl diphosphate synthase (Fragment) | 16.1.5 secondary metabolism.isoprenoids.terpenoids | 17.6.1.1 hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase | 17.6.1.2 hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase | 0 | 0.11625594993725201 | 2152 | 2171 | 2162 | -31.7 | -21.5 | 0.6782334384858041 | 3 |
| vsiRNA34329 | Sotub01g042620 | Sotub01g042620 | RIBA1 | 3 4-dihydroxy-2-butanone 4-phosphate synthase | 16.2 secondary metabolism.phenylpropanoids | 18.3.1 Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II | 1 | 0.0139207547942545 | 1378 | 1398 | 1389 | -32.4 | -23.22 | 0.716666666666667 | 3 |
| vsiRNA34331 | Sotub06g011990 | Sotub06g011990 | F21M12.3 | Elongation factor 1 gamma-like protein | 29.2.4 protein.synthesis.elongation | 2 | 0.34128713609675804 | 850 | 869 | 860 | -36.1 | -24 | 0.664819944598338 | 2 |
| vsiRNA34354 | Sotub04g034870 | Sotub04g034870 | TUBB1 | Tubulin beta-1 chain | 11.1.8 lipid metabolism.FA synthesis and FA elongation.acyl CoA ligase | 16.2 secondary metabolism.phenylpropanoids | 31.1 cell.organisation | 2 | 0.34316794755091 | 935 | 954 | 945 | -36.2 | -23.8 | 0.657458563535912 | 3 |
| vsiRNA34355 | Sotub07g008570 | Sotub07g008570 | RFS1 | Alkaline alpha galactosidase 2 | 3.1.2.1 minor CHO metabolism.raffinose family.raffinose synthases.known | 3.1.3 minor CHO metabolism.raffinose family.stachyose synthases | 1 | 0.0169863540973219 | 1178 | 1197 | 1188 | -37.6 | -24.68 | 0.656382978723404 | 3 |
| vsiRNA34360 | Sotub10g017730 | Sotub10g017730 | SPE1 | Arginine decarboxylase | 13.2.2.3 amino acid metabolism.degradation.glutamate family.arginine | 22.1.3 polyamine metabolism.synthesis.arginine decarboxylase | 2 | 0.257869580425908 | 2097 | 2116 | 2107 | -33.9 | -22.5 | 0.6637168141592921 | 3 |
| vsiRNA34360 | Sotub11g007320 | Sotub11g007320 | GAD1 | Glutamate decarboxylase | 13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.glutamate decarboxylase | 2 | 0.270927489517649 | 352 | 370 | 361 | -33.9 | -22.4 | 0.6607669616519171 | 3 |
| vsiRNA34360 | Sotub07g022420 | Sotub07g022420 | FTSH1 | ATP-dependent zinc metalloprotease FtsH 4 | 29.5.7 protein.degradation.metalloprotease | 31.2 cell.division | 3 | 0.00948303456719168 | 909 | 928 | 919 | -33.9 | -25.6 | 0.755162241887906 | 2 |
| vsiRNA34371 | Sotub09g015310 | Sotub09g015310 | F7P12.1 | Reverse transcriptase like protein | 18.7 Co-factor and vitamine metabolism.iron-sulphur clusters | 20.1 stress.biotic | 27.1.19 RNA.processing.ribonucleases | 27.3.99 RNA.regulation of transcription.unclassified | 28.2 DNA.repair | 29.4 protein.postranslational modification | 29.5.3 protein.degradation.cysteine protease | 29.5.11 protein.degradation.ubiquitin | 29.6 protein.folding | 30.2.17 signalling.receptor kinases.DUF 26 | 31.1 cell.organisation | 31.4 cell.vesicle transport | 33.99 development.unspecified | 34.16 transport.ABC transporters and multidrug resistance systems | 1 | 0.0335280920836694 | 1915 | 1934 | 1925 | -33 | -22.6 | 0.684848484848485 | 3 |
| vsiRNA34371 | Sotub06g017560 | Sotub06g017560 | IPMS1 | 2-isopropylmalate synthase 1 | 13.1.4.4.1 amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase | 27.4 RNA.RNA binding | 2 | 0.14834437805540102 | 225 | 253 | 242 | -33 | -22.8 | 0.690909090909091 | 0 |
| vsiRNA34371 | Sotub05g016320 | Sotub05g016320 | F1N21.18 | REF-like stress related protein 1 | 16.1 secondary metabolism.isoprenoids | 2 | 0.42627845624251304 | 473 | 491 | 482 | -33 | -21.5 | 0.651515151515151 | 2 |
| vsiRNA34376 | Sotub10g027110 | Sotub10g027110 | NACA3 | Nascent polypeptide-associated complex alpha subunit-like protein | 29.2.4 protein.synthesis.elongation | 31.99 cell.unspecified | 2 | 0.33370987958486703 | 89 | 109 | 99 | -28.4 | -21.1 | 0.742957746478873 | 2 |
| vsiRNA34376 | Sotub08g022600 | Sotub08g022600 | IP5P2 | Inositol 1 4 5-trisphosphate 5-phosphatase | 3.4.1 minor CHO metabolism.myo-inositol.poly-phosphatases | 28.1 DNA.synthesis/chromatin structure | 2 | 0.47297018943142505 | 1625 | 1645 | 1635 | -28.4 | -20.6 | 0.725352112676056 | 3 |
| vsiRNA34376 | Sotub12g009890 | Sotub12g009890 | RPL31A | 60S ribosomal protein L31 | 29.2.1.2.2.31 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.5410683046071071 | 254 | 273 | 264 | -28.4 | -19.9 | 0.7007042253521131 | 3 |
| vsiRNA34376 | Sotub12g013560 | Sotub12g013560 | HSP90-1 | Heat shock protein 90 | 20.2.1 stress.abiotic.heat | 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family | 3 | 0.287745054060281 | 422 | 440 | 432 | -28.4 | -19.5 | 0.686619718309859 | 1 |
| vsiRNA34383 | Sotub04g007710 | Sotub04g007710 | VIT1 | Vacuolar iron transporter Ccc1 | 15.3 metal handling.regulation | 30.2.6 signalling.receptor kinases.leucine rich repeat VI | 34.12 transport.metal | 0 | 0.0506714500982275 | 202 | 221 | 212 | -30.7 | -20.5 | 0.6677524429967431 | 3 |
| vsiRNA34385 | Sotub02g032940 | Sotub02g032940 | PSBO1 | Oxygen-evolving enhancer protein 1 of photosystem II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.187390715520622 | 693 | 714 | 704 | -31.8 | -20.8 | 0.654088050314465 | 3 |
| vsiRNA34387 | Sotub06g011440 | Sotub06g011440 | FDM3 | X1 (Fragment) | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 27.5.3.2.1 RNA.silencing.transitivity.SGS.XH-XS | 1 | 0.040048693375319 | 1766 | 1787 | 1778 | -31.4 | -21.2 | 0.67515923566879 | 3 |
| vsiRNA34416 | Sotub06g021550 | Sotub06g021550 | bHLH | LAX (Fragment) | 27.3.6 RNA.regulation of transcription.basic helix-loop-helix family (bHLH) | 1 | 0.0282292704880867 | 944 | 963 | 954 | -32.2 | -21.88 | 0.6795031055900621 | 3 |
| vsiRNA34426 | Sotub12g008360 | Sotub12g008360 | (ET):EBF | SCF E3 ubiquitin ligase complex F-box protein grrA | 3.6 minor CHO metabolism.callose | 26.10 misc.cytochrome P450 | 27.3.99 RNA.regulation of transcription.unclassified | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 0 | 0.017941194889003 | 1039 | 1060 | 1051 | -28.6 | -21.7 | 0.7587412587412591 | 2 |
| vsiRNA34426 | AM907690 | AM907690 | AM907690 | NA | 35.2 not assigned.unknown | 1 | 0.194952279697876 | 89 | 108 | 100 | -28.6 | -18.7 | 0.6538461538461541 | 3 |
| vsiRNA34426 | Sotub03g035740 | Sotub03g035740 | bHLH | BHLH transcription factor-like | 27.3.6 RNA.regulation of transcription.basic helix-loop-helix family (bHLH) | 1 | 0.133303219604189 | 830 | 851 | 840 | -28.6 | -18.8 | 0.6573426573426571 | 3 |
| vsiRNA34426 | Sotub01g040480 | Sotub01g040480 | ECT11 | YTH domain family 2 (Predicted) | 30.3 signalling.calcium | 2 | 0.801982363875637 | 1460 | 1482 | 1473 | -28.6 | -18.7 | 0.6538461538461541 | 3 |
| vsiRNA34429 | Sotub08g006800 | Sotub08g006800 | SKIP25 | Kelch repeat-containing F-box family protein | 1.1.4 PS.lightreaction.ATP synthase | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 1 | 0.00208693461689435 | 1030 | 1050 | 1041 | -30.5 | -24.3 | 0.79672131147541 | 0 |
| vsiRNA34435 | Sotub01g005890 | Sotub01g005890 | Sotub01g005890.1.1 | Importin beta | 35.1 not assigned.no ontology | 0 | 0.00875028031358005 | 196 | 214 | 206 | -28.8 | -21.4 | 0.743055555555555 | 3 |
| vsiRNA34435 | Sotub12g026810 | Sotub12g026810 | RD21A | Cathepsin B-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 34.19.1 transport.major intrinsic proteins.PIP | 3 | 0.14049089351909802 | 1127 | 1151 | 1138 | -28.8 | -19.7 | 0.684027777777778 | 1 |
| vsiRNA34458 | Sotub02g031970 | Sotub02g031970 | ZEP | Zeaxanthin epoxidase chloroplastic | 17.1.1.1.1 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase | 2 | 0.0897942023422952 | 1420 | 1440 | 1432 | -36.7 | -24.48 | 0.667029972752044 | 3 |
| vsiRNA34464 | Sotub02g023740 | Sotub02g023740 | SS3 | Glycogen synthase 1 | 2.1.2.2 major CHO metabolism.synthesis.starch.starch synthase | 2 | 0.39022818049108104 | 204 | 225 | 216 | -34.2 | -23.2 | 0.6783625730994151 | 2 |
| vsiRNA34474 | Sotub01g040810 | Sotub01g040810 | T11G11 | Ubiquitin-like domain containing CTD phosphatase 1 | 29.5.11.1 protein.degradation.ubiquitin.ubiquitin | 0 | 0.053448529633407696 | 740 | 761 | 752 | -33.6 | -21.9 | 0.6517857142857141 | 1 |
| vsiRNA34477 | Sotub05g025230 | Sotub05g025230 | CZF1 | Zinc finger CCCH domain-containing protein 37 | 27.3.12 RNA.regulation of transcription.C3H zinc finger family | 2 | 0.3849749976308 | 197 | 218 | 207 | -26.3 | -18.2 | 0.6920152091254751 | 1 |
| vsiRNA34480 | Sotub12g030180 | Sotub12g030180 | F13M7.16 | Ubiquitin carboxyl-terminal hydrolase | 29.5.11 protein.degradation.ubiquitin | 1 | 0.0159868638862553 | 197 | 216 | 207 | -37.6 | -25.8 | 0.686170212765957 | 3 |
| vsiRNA34517 | PGSC0003DMC400061760 | PGSC0003DMG400039656 | PGSC0003DMG400039656 | Gene of unknown function | 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 34.19 transport.major intrinsic proteins | 2 | 0.0525660092923481 | 467 | 485 | 477 | -38.1 | -26.2 | 0.6876640419947511 | 2 |
| vsiRNA34522 | Sotub02g029110 | Sotub02g029110 | RBCS-1A | Ribulose bisphosphate carboxylase small chain | 1.3.2 PS.calvin cycle.rubisco small subunit | 26.10 misc.cytochrome P450 | 34.3 transport.amino acids | 3 | 0.0137537527967866 | 489 | 508 | 499 | -34.7 | -24.3 | 0.70028818443804 | 3 |
| vsiRNA34530 | Sotub12g011130 | Sotub12g011130 | PAT1 | Genomic DNA chromosome 3 P1 clone MMP21 | 35.2 not assigned.unknown | 3 | 0.032856010017952006 | 164 | 183 | 174 | -35.6 | -24.1 | 0.6769662921348321 | 2 |
| vsiRNA34550 | Sotub06g033000 | Sotub06g033000 | TAF15B | RNA-binding protein FUS | 27.3.99 RNA.regulation of transcription.unclassified | 2 | 0.009897694271262641 | 107 | 126 | 117 | -35.4 | -27.7 | 0.7824858757062151 | 1 |
| vsiRNA34550 | Sotub06g033000 | Sotub06g033000 | TAF15B | RNA-binding protein FUS | 27.3.99 RNA.regulation of transcription.unclassified | 2 | 0.0813275786630839 | 14 | 33 | 24 | -35.4 | -25.2 | 0.711864406779661 | 3 |
| vsiRNA34558 | PGSC0003DMC400013307 | PGSC0003DMG400007516 | PGSC0003DMG400007516 | Conserved gene of unknown function | 35.2 not assigned.unknown | 2 | 0.19540243458436102 | 728 | 747 | 738 | -30.7 | -20.1 | 0.654723127035831 | 2 |
| vsiRNA34581 | Sotub11g005380 | Sotub11g005380 | RAF1 | Homology to unknown gene | 31.3.1 cell.cycle.peptidylprolyl isomerase | 3 | 0.163818827660643 | 976 | 995 | 986 | -34 | -22.6 | 0.664705882352941 | 3 |
| vsiRNA34583 | Sotub04g034270 | Sotub04g034270 | F1B16.1 | Peptidase S16 lon domain protein | 29.5 protein.degradation | 2 | 0.276104656019788 | 103 | 123 | 114 | -30 | -21.4 | 0.713333333333333 | 1 |
| vsiRNA34603 | Sotub01g034210 | Sotub01g034210 | NF-YC | Nuclear transcription factor Y subunit C-3 | 27.3.16 RNA.regulation of transcription.CCAAT box binding factor family, HAP5 | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 2 | 0.028188737834143898 | 131 | 151 | 141 | -32.8 | -24 | 0.731707317073171 | 3 |
| vsiRNA34628 | Sotub01g037560 | Sotub01g037560 | TCTP1 | Translationally-controlled tumor protein homolog | 33.99 development.unspecified | 3 | 0.0188173447094151 | 229 | 249 | 239 | -30.5 | -24 | 0.7868852459016391 | 2 |
| vsiRNA34639 | Sotub08g017320 | Sotub08g017320 | ARA1 | Galactokinase like protein | 3.8.1 minor CHO metabolism.galactose.galactokinases | 10.1.30.2 cell wall.precursor synthesis.sugar kinases.arabinose-1-kinase | 1 | 0.0825606148411729 | 2174 | 2192 | 2184 | -33.7 | -22.1 | 0.6557863501483681 | 2 |
| vsiRNA34639 | Sotub02g023710 | Sotub02g023710 | ATPC1 | ATP synthase gamma chain | 1.1.4.4 PS.lightreaction.ATP synthase.gamma chain | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.48379673442810905 | 769 | 793 | 783 | -33.7 | -22 | 0.6528189910979231 | 1 |
| vsiRNA34639 | Sotub07g012190 | Sotub07g012190 | T25K17.20 | Mitochondrial ATP synthase g subunit family protein | 9.9 mitochondrial electron transport / ATP synthesis.F1-ATPase | 2 | 0.46561494959683 | 356 | 375 | 366 | -33.7 | -22 | 0.6528189910979231 | 2 |
| vsiRNA34642 | Sotub02g016860 | Sotub02g016860 | Sotub02g016860.1.1 | Alpha/beta hydrolase fold | 28.2 DNA.repair | 2 | 0.0141951196276943 | 662 | 684 | 676 | -34 | -25.3 | 0.7441176470588241 | 1 |
| vsiRNA34660 | Sotub04g020890 | Sotub04g020890 | ERF | Ethylene-responsive transcription factor 5 | 17.5.2 hormone metabolism.ethylene.signal transduction | 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/ethylene-responsive element binding protein family | 2 | 0.5911983736874931 | 965 | 983 | 974 | -34.4 | -22.5 | 0.6540697674418611 | 2 |
| vsiRNA34660 | Sotub05g014250 | Sotub05g014250 | GGAT1 | Alanine aminotransferase 2 | 1.2.3 PS.photorespiration.aminotransferases peroxisomal | 13.1.1.3.1 amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase | 13.1.5.2.2 amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase | 28.1.1.4 DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase | 2 | 0.024546242206054298 | 1324 | 1344 | 1335 | -34.4 | -26.1 | 0.758720930232558 | 3 |
| vsiRNA34662 | Sotub09g027750 | Sotub09g027750 | HDA19 | Histone deacetylase | 27.3.55 RNA.regulation of transcription.HDA | 2 | 0.419159852831733 | 1222 | 1242 | 1233 | -33.3 | -22.9 | 0.6876876876876881 | 3 |
| vsiRNA34671 | Sotub02g006630 | Sotub02g006630 | CCB1 | CPLD51 protein required for cyt b6 assembly | 35.2 not assigned.unknown | 2 | 0.226941951140805 | 397 | 416 | 407 | -29.1 | -20.1 | 0.6907216494845361 | 1 |
| vsiRNA34671 | Sotub01g035280 | Sotub01g035280 | PHOT1 | Serine/threonine protein kinase | 29.4 protein.postranslational modification | 30.11 signalling.light | 2 | 0.421612460629923 | 2740 | 2761 | 2752 | -29.1 | -19.3 | 0.663230240549828 | 3 |
| vsiRNA34687 | Sotub08g007630 | Sotub08g007630 | (SA):SAGT | UDP-glucosyltransferase family 1 protein | 26.2 misc.UDP glucosyl and glucoronyl transferases | 28.1 DNA.synthesis/chromatin structure | 1 | 0.0461378694852264 | 8023 | 8042 | 8033 | -27.3 | -18.6 | 0.681318681318681 | 3 |
| vsiRNA34687 | Sotub08g007240 | Sotub08g007240 | GGCT2;1 | Cation transport regulator-like protein 2 | 29.2.2 protein.synthesis.ribosome biogenesis | 34.14 transport.unspecified cations | 2 | 0.028188737834143898 | 534 | 552 | 544 | -27.3 | -21 | 0.769230769230769 | 1 |
| vsiRNA34701 | Sotub01g017120 | Sotub01g017120 | psbB | Photosystem II CP47 chlorophyll apoprotein | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 29.5 protein.degradation | 2 | 0.109989505079534 | 822 | 840 | 831 | -40.5 | -27.2 | 0.6716049382716051 | 1 |
| vsiRNA34704 | PGSC0003DMC400051920 | PGSC0003DMG400029799 | PGSC0003DMG400029799 | Gene of unknown function | 8.1.8 TCA / organic transformation.TCA.fumarase | 34.1 transport.p- and v-ATPases | 0 | 0.0422565196869682 | 63 | 82 | 73 | -26.9 | -19.2 | 0.7137546468401491 | 2 |
| vsiRNA34704 | Sotub06g022740 | Sotub06g022740 | WRKY | WRKY transcription factor 1 | 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family | 2 | 0.19264518411619402 | 1088 | 1107 | 1098 | -26.9 | -19.4 | 0.721189591078067 | 2 |
| vsiRNA34704 | Sotub10g025510 | Sotub10g025510 | U2AF35A | Splicing factor U2af subunit | 27.1.1 RNA.processing.splicing | 2 | 0.7300692944667481 | 855 | 876 | 865 | -26.9 | -17.68 | 0.65724907063197 | 3 |
| vsiRNA34715 | Sotub07g023620 | Sotub07g023620 | FUG1 | Translation initiation factor IF-2 | 29.2.3 protein.synthesis.initiation | 2 | 0.180302729408076 | 2069 | 2089 | 2079 | -31.2 | -21.8 | 0.698717948717949 | 1 |
| vsiRNA34737 | Sotub02g035640 | Sotub02g035640 | FTRC | Ferredoxin-thioredoxin reductase catalytic chain | 21.1 redox.thioredoxin | 29.5.11.1 protein.degradation.ubiquitin.ubiquitin | 2 | 0.0998141364388908 | 269 | 287 | 279 | -32.4 | -23.4 | 0.7222222222222221 | 2 |
| vsiRNA34746 | Sotub11g023870 | Sotub11g023870 | HSP70-10 | heat shock protein | 10.3 cell wall.hemicellulose synthesis | 20.2.1 stress.abiotic.heat | 26.10 misc.cytochrome P450 | 29.6 protein.folding | 34.99 transport.misc | 0 | 0.10274123394803 | 1868 | 1891 | 1882 | -32.4 | -21.4 | 0.6604938271604941 | 2 |
| vsiRNA34746 | Sotub06g023300 | Sotub06g023300 | EMB2753 | N-alpha-acetyltransferase 16, NatA auxiliary subunit | 26.5 misc.acyl transferases | 1 | 0.0053699598655805305 | 2306 | 2328 | 2316 | -32.4 | -24.6 | 0.7592592592592591 | 1 |
| vsiRNA34746 | Sotub07g017790 | Sotub07g017790 | HPD | p-hydroxyphenylpyruvate dioxygenase | 13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine | 16.1.3.1 secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase | 2 | 0.180400966173648 | 889 | 906 | 898 | -32.4 | -22.5 | 0.6944444444444441 | 3 |
| vsiRNA34749 | Sotub10g007130 | Sotub10g007130 | PORA | Protochlorophyllide reductase | 19.14 tetrapyrrole synthesis.protochlorophyllide reductase | 2 | 0.576763371463561 | 770 | 789 | 779 | -28.4 | -19.1 | 0.6725352112676061 | 2 |
| vsiRNA34750 | Sotub07g013670 | Sotub07g013670 | ATR1 | Cytochrome P450 NADPH-reductase | 16.2 secondary metabolism.phenylpropanoids | 26.10 misc.cytochrome P450 | 2 | 0.113711054242251 | 176 | 201 | 186 | -36.2 | -24.4 | 0.6740331491712711 | 2 |
| vsiRNA34750 | Sotub11g025940 | Sotub11g025940 | ABCF1 | ATP-binding cassette | 34.16 transport.ABC transporters and multidrug resistance systems | 3 | 0.00196324036502493 | 1572 | 1592 | 1583 | -36.2 | -30.3 | 0.837016574585635 | 1 |
| vsiRNA34753 | PGSC0003DMC400057067 | PGSC0003DMG400034963 | PGSC0003DMG400034963 | Conserved gene of unknown function | 20.1.7.12 stress.biotic.PR-proteins.PR12 (plant defensins) | 0 | 0.0199394998554649 | 315 | 337 | 327 | -41.9 | -28.6 | 0.6825775656324581 | 1 |
| vsiRNA34755 | Sotub03g017080 | Sotub03g017080 | NACA2 | Nascent polypeptide-associated complex alpha subunit-like protein | 29.2.3 protein.synthesis.initiation | 29.2.4 protein.synthesis.elongation | 1 | 0.0222175706313867 | 359 | 390 | 381 | -34.3 | -22.3 | 0.650145772594752 | 3 |
| vsiRNA34792 | TC223471 | TC223471 | TC223471 | NA | 35.2 not assigned.unknown | 2 | 0.00141999115323088 | 211 | 230 | 221 | -35.7 | -37.1 | 1 | 0 |
| vsiRNA34792 | Sotub10g014540 | Sotub10g014540 | RBG8 | Glycine-rich RNA-binding protein | 17.2.2 hormone metabolism.auxin.signal transduction | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 2 | 0.0226152867448089 | 300 | 323 | 314 | -35.7 | -28.36 | 0.7943977591036411 | 3 |
| vsiRNA34795 | Sotub03g019370 | Sotub03g019370 | GLT1 | Glutamate synthase (Ferredoxin) | 12.2.1.1 N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent | 12.2.1.2 N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent | 2 | 0.20748877875306201 | 4108 | 4127 | 4119 | -30.9 | -20.3 | 0.6569579288025891 | 2 |
| vsiRNA34798 | Sotub03g025760 | Sotub03g025760 | PCMP-E65 | Pentatricopeptide repeat-containing protein | 29.4 protein.postranslational modification | 34.99 transport.misc | 0 | 0.0624180559975207 | 587 | 607 | 598 | -37.3 | -24.42 | 0.6546916890080431 | 3 |
| vsiRNA34798 | Sotub12g026810 | Sotub12g026810 | RD21A | Cathepsin B-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 34.19.1 transport.major intrinsic proteins.PIP | 2 | 0.172155467113314 | 1183 | 1212 | 1203 | -37.3 | -25.1 | 0.6729222520107241 | 1 |
| vsiRNA34801 | Sotub01g047970 | Sotub01g047970 | ASE1 | Amidophosphoribosyltransferase | 23.1.2.1 nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase | 27.3.22 RNA.regulation of transcription.homeobox transcription factor family (HB) | 2 | 0.0953874248736566 | 1208 | 1228 | 1218 | -27.8 | -20.6 | 0.741007194244604 | 1 |
| vsiRNA34801 | Sotub12g027890 | Sotub12g027890 | CAT1 | Catalase | 21.6 redox.dismutases and catalases | 2 | 0.37747602003707703 | 1416 | 1434 | 1426 | -27.8 | -18.8 | 0.6762589928057551 | 3 |
| vsiRNA34801 | PGSC0003DMC400030533 | PGSC0003DMG400017478 | PGSC0003DMG400017478 | Gene of unknown function | 35.2 not assigned.unknown | 3 | 0.0715834214612381 | 23 | 41 | 33 | -27.8 | -19.6 | 0.7050359712230221 | 2 |
| vsiRNA34812 | Sotub05g012050 | Sotub05g012050 | F10M23.360 | mRNA clone RTFL01-05-M08 | 17.3.1.1.1 hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.505102315284314 | 1149 | 1173 | 1163 | -31.1 | -20.5 | 0.6591639871382641 | 0 |
| vsiRNA34812 | Sotub02g020850 | Sotub02g020850 | rps5 | 30S ribosomal protein S5 | 29.2.1.1.1.1.5 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5 | 2 | 0.12154285886780901 | 337 | 361 | 352 | -31.1 | -22 | 0.7073954983922831 | 2 |
| vsiRNA34817 | Sotub04g023260 | Sotub04g023260 | SDC | Histidine decarboxylase | 11.3 lipid metabolism.phospholipid synthesis | 13.2.7 amino acid metabolism.degradation.histidine | 26.10 misc.cytochrome P450 | 29.5.11.20 protein.degradation.ubiquitin.proteasom | 2 | 0.6184855739906361 | 551 | 579 | 570 | -30.3 | -19.8 | 0.653465346534653 | 0 |
| vsiRNA34818 | Sotub10g017740 | Sotub10g017740 | PNSL1 | Photosystem II oxygen evolving complex protein PsbP | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.33940093901668705 | 522 | 545 | 533 | -37.3 | -24.7 | 0.6621983914209121 | 0 |
| vsiRNA34845 | Sotub01g049250 | Sotub01g049250 | ABD1 | DDB1- and CUL4-associated factor 8 | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 30.11 signalling.light | 2 | 0.326045460943019 | 1331 | 1354 | 1345 | -33.4 | -22.66 | 0.678443113772455 | 2 |
| vsiRNA34845 | Sotub07g022420 | Sotub07g022420 | FTSH1 | ATP-dependent zinc metalloprotease FtsH 4 | 29.5.7 protein.degradation.metalloprotease | 31.2 cell.division | 3 | 0.168241801252413 | 251 | 271 | 262 | -33.4 | -22.3 | 0.6676646706586831 | 3 |
| vsiRNA34881 | Sotub02g023810 | Sotub02g023810 | APR1 | Phosphoadenosine phosphosulfate reductase | 14.2 S-assimilation.APR | 2 | 0.0314481340228615 | 140 | 160 | 151 | -33.3 | -24.1 | 0.7237237237237241 | 2 |
| vsiRNA34882 | Sotub07g028200 | Sotub07g028200 | UPL1 | Ubiquitin-protein ligase 1 | 20.2.3 stress.abiotic.drought/salt | 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT | 2 | 0.123100895336853 | 10181 | 10200 | 10191 | -27.1 | -18.8 | 0.6937269372693731 | 3 |
| vsiRNA34884 | Sotub08g026990 | Sotub08g026990 | GBSS1 | Granule-bound starch synthase | 2.1.2.2 major CHO metabolism.synthesis.starch.starch synthase | 2 | 0.50576618454143 | 997 | 1017 | 1008 | -27.4 | -18.1 | 0.66058394160584 | 2 |
| vsiRNA34885 | Sotub01g039110 | Sotub01g039110 | APA1 | Aspartic proteinase 4 | 29.5.4 protein.degradation.aspartate protease | 2 | 0.271584073287841 | 315 | 334 | 325 | -33.6 | -22 | 0.6547619047619051 | 2 |
| vsiRNA34891 | Sotub01g043180 | Sotub01g043180 | EX1 | T17H3.1 protein (Fragment) | 35.2 not assigned.unknown | 2 | 0.164846809303162 | 1032 | 1051 | 1042 | -26.6 | -19.2 | 0.721804511278195 | 2 |
| vsiRNA34904 | Sotub12g026810 | Sotub12g026810 | RD21A | Cathepsin B-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 34.19.1 transport.major intrinsic proteins.PIP | 3 | 0.00598335319472731 | 1123 | 1152 | 1133 | -30.9 | -23.9 | 0.7734627831715211 | 1 |
| vsiRNA34927 | Sotub09g029310 | Sotub09g029310 | CCL | Light regulated protein-like protein | 30.11 signalling.light | 3 | 0.653459995484431 | 287 | 308 | 299 | -25.4 | -17 | 0.6692913385826771 | 3 |
| vsiRNA34939 | Sotub09g027230 | Sotub09g027230 | CPN60 | chaperonin | 20.2.1 stress.abiotic.heat | 29.4 protein.postranslational modification | 29.6 protein.folding | 0 | 0.0386826564515763 | 526 | 548 | 537 | -32.4 | -21.5 | 0.66358024691358 | 0 |
| vsiRNA34959 | Sotub01g006500 | Sotub01g006500 | T11I18.5 | Casein kinase-like protein | 29.4 protein.postranslational modification | 2 | 0.22467812567741902 | 546 | 572 | 556 | -30 | -21.9 | 0.73 | 0 |
| vsiRNA34959 | Sotub02g019750 | Sotub02g019750 | Sotub02g019750.1.1 | Cathepsin B-like cysteine proteinase 5 | 29.5.3 protein.degradation.cysteine protease | 2 | 0.9196980622263471 | 603 | 627 | 613 | -30 | -19.7 | 0.6566666666666671 | 1 |
| vsiRNA34959 | Sotub04g025090 | Sotub04g025090 | ndhM | NAD(P)H-quinone oxidoreductase subunit M | 1.1.6 PS.lightreaction.NADH DH | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 | 0.17851477668607402 | 102 | 120 | 111 | -30 | -22.2 | 0.74 | 2 |
| vsiRNA34959 | Sotub12g025320 | Sotub12g025320 | ATPD | ATP synthase delta subunit | 1.1.4.7 PS.lightreaction.ATP synthase.delta chain | 2 | 0.38625427878072505 | 480 | 499 | 490 | -30 | -21.1 | 0.703333333333333 | 2 |
| vsiRNA34964 | Sotub01g007980 | Sotub01g007980 | 2-Cys Prx B | Peroxiredoxin | 21.1 redox.thioredoxin | 21.5.1 redox.peroxiredoxin.BAS1 | 2 | 0.215764702165734 | 358 | 382 | 373 | -32.6 | -21.7 | 0.665644171779141 | 0 |
| vsiRNA34968 | Sotub02g037300 | Sotub02g037300 | SOX | Sulfite oxidase-like | 12.1.1 N-metabolism.nitrate metabolism.NR | 14.3 S-assimilation.sulfite redox | 14.5 S-assimilation.sulfite oxidase | 2 | 0.20447208829186703 | 207 | 229 | 217 | -34.6 | -23.64 | 0.683236994219653 | 1 |
| vsiRNA34970 | Sotub12g020880 | Sotub12g020880 | NMT1 | Ubiquinone/menaquinone biosynthesis methyltransferase ubiE | 2.2.2.6 major CHO metabolism.degradation.starch.transporter | 11.3 lipid metabolism.phospholipid synthesis | 2 | 0.330163806297102 | 1449 | 1469 | 1460 | -32.6 | -21.4 | 0.656441717791411 | 2 |
| vsiRNA34970 | Sotub06g035020 | Sotub06g035020 | (SCF):CUL | Ubiquitin-protein ligase Cullin 4 | 17.4.2 hormone metabolism.cytokinin.signal transduction | 20.2.3 stress.abiotic.drought/salt | 27.3.99 RNA.regulation of transcription.unclassified | 29.5.11.4.3.3 protein.degradation.ubiquitin.E3.SCF.cullin | 3 | 0.0965738297902585 | 1384 | 1403 | 1394 | -32.6 | -21.7 | 0.665644171779141 | 3 |
| vsiRNA34975 | Sotub12g018630 | Sotub12g018630 | RACK1A | Guanine nucleotide-binding protein beta subunit-like protein | 27.3.99 RNA.regulation of transcription.unclassified | 29.4 protein.postranslational modification | 30.5 signalling.G-proteins | 33.99 development.unspecified | 2 | 0.0434091438643038 | 611 | 631 | 622 | -29.7 | -20.3 | 0.683501683501683 | 1 |
| vsiRNA34975 | Sotub06g019230 | Sotub06g019230 | Sotub06g019230.1.1 | 40S ribosomal protein S8 | 29.2.1.2.1.8 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.0123493746299019 | 132 | 151 | 141 | -29.7 | -21.4 | 0.72053872053872 | 2 |
| vsiRNA35000 | Sotub01g047410 | Sotub01g047410 | ANX1 | Receptor-like kinase | 17.5.2 hormone metabolism.ethylene.signal transduction | 29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII | 30.2.1 signalling.receptor kinases.leucine rich repeat I | 30.2.16 signalling.receptor kinases.Catharanthus roseus-like RLK1 | 30.2.26 signalling.receptor kinases.crinkly like | 2 | 0.12004985510995 | 1902 | 1924 | 1913 | -40.3 | -27.2 | 0.6749379652605461 | 2 |
