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| vsiRNA12187 | Sotub07g016410 | Sotub07g016410 | CPN21 | chaperonin | 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated | 20.2.1 stress.abiotic.heat | 29.6 protein.folding | 2 | 0.0365924860951974 | 213 | 234 | 225 | -33.3 | -26.1 | 0.7837837837837841 | 2 |
| vsiRNA12187 | Sotub12g008750 | Sotub12g008750 | Sotub12g008750.1.1 | chaperonin | 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated | 20.2.1 stress.abiotic.heat | 29.6 protein.folding | 2 | 0.0972521688492712 | 1095 | 1116 | 1107 | -33.3 | -24.6 | 0.7387387387387391 | 2 |
| vsiRNA12190 | Sotub01g039500 | Sotub01g039500 | FRO6 | Ferric reductase oxidase | 15.1 metal handling.acquisition | 30.3 signalling.calcium | 2 | 0.0866254484798032 | 903 | 922 | 913 | -33 | -23 | 0.696969696969697 | 2 |
| vsiRNA12190 | Sotub06g033000 | Sotub06g033000 | TAF15B | RNA-binding protein FUS | 27.3.99 RNA.regulation of transcription.unclassified | 2 | 0.24822839117326 | 154 | 177 | 167 | -33 | -21.64 | 0.6557575757575761 | 2 |
| vsiRNA12206 | Sotub02g010230 | Sotub02g010230 | CBP20 | Nuclear cap-binding protein subunit 2 | 27.1.1 RNA.processing.splicing | 2 | 0.35249175711072905 | 17 | 38 | 29 | -33 | -21.7 | 0.657575757575758 | 1 |
| vsiRNA12209 | Sotub04g024260 | Sotub04g024260 | VPS45 | Vacuolar protein-sorting protein 45 | 29.3.4.3 protein.targeting.secretory pathway.vacuole | 0 | 0.0050296797078595 | 1484 | 1504 | 1495 | -35.2 | -24.28 | 0.6897727272727271 | 3 |
| vsiRNA12227 | Sotub11g020430 | Sotub11g020430 | Sotub11g020430.1.1 | DUF803 domain membrane protein | 27.3.39 RNA.regulation of transcription.AtSR transcription factor family | 34.10 transport.nucleotides | 2 | 0.0053113852267952 | 256 | 277 | 268 | -38 | -28.2 | 0.742105263157895 | 0 |
| vsiRNA12236 | Sotub03g023940 | Sotub03g023940 | MLS | Malate synthase | 6.2 gluconeogenesis / glyoxylate cycle.malate synthase | 2 | 0.18838872364706402 | 451 | 470 | 461 | -28.1 | -20.9 | 0.743772241992882 | 3 |
| vsiRNA12236 | Sotub03g029450 | Sotub03g029450 | CHLP | Geranylgeranyl reductase | 16.1.1 secondary metabolism.isoprenoids.non-mevalonate pathway | 3 | 0.35350105071538 | 909 | 927 | 919 | -28.1 | -18.9 | 0.6725978647686831 | 3 |
| vsiRNA12236 | Sotub09g009340 | Sotub09g009340 | HSP70-10 | heat shock protein | 10.3 cell wall.hemicellulose synthesis | 20.2.1 stress.abiotic.heat | 26.10 misc.cytochrome P450 | 29.6 protein.folding | 34.99 transport.misc | 3 | 0.24782769093443602 | 910 | 930 | 921 | -28.1 | -19.3 | 0.686832740213523 | 3 |
| vsiRNA12237 | Sotub08g024740 | Sotub08g024740 | Sotub08g024740.1.1 | Unknown Protein | 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 | 0.0582794486321382 | 61 | 84 | 73 | -34.4 | -23.4 | 0.6802325581395351 | 0 |
| vsiRNA12241 | Sotub04g015820 | Sotub04g015820 | F13K9.21 | Ubiquitin thioesterase OTUB1 | 35.2 not assigned.unknown | 0 | 0.00215934756568004 | 18 | 39 | 30 | -35.3 | -26.4 | 0.747875354107649 | 2 |
| vsiRNA12250 | Sotub07g019470 | Sotub07g019470 | RRP6L3 | Exosome component 10 protein | 28.99 DNA.unspecified | 3 | 0.0110741882812788 | 1234 | 1255 | 1245 | -34.8 | -24.6 | 0.706896551724138 | 0 |
| vsiRNA12268 | Sotub10g011300 | Sotub10g011300 | FD1 | Ferredoxin I | 1.1.5.2 PS.lightreaction.other electron carrier (ox/red).ferredoxin | 21.2.2 redox.ascorbate and glutathione.glutathione | 26.30 misc.other Ferredoxins and Rieske domain | 2 | 0.149168696775474 | 67 | 89 | 79 | -34.7 | -23.1 | 0.6657060518731991 | 2 |
| vsiRNA12282 | Sotub03g020970 | Sotub03g020970 | EIF2 ALPHA | Eukaryotic translation initiation factor 2 alpha subunit family protein expressed | 27.3.99 RNA.regulation of transcription.unclassified | 29.2.3 protein.synthesis.initiation | 2 | 0.008541413503587721 | 858 | 883 | 874 | -38.7 | -29.46 | 0.761240310077519 | 2 |
| vsiRNA12309 | Sotub05g007130 | Sotub05g007130 | ALA1 | Phospholipid-transporting ATPase | 34.1 transport.p- and v-ATPases | 0 | 0.029548005364690398 | 3453 | 3474 | 3464 | -32.5 | -21.7 | 0.667692307692308 | 2 |
| vsiRNA12309 | Sotub05g006840 | Sotub05g006840 | NRPB3 | DNA-directed RNA polymerase II subunit 3 | 27.2 RNA.transcription | 1 | 0.0277534784674655 | 558 | 585 | 576 | -32.5 | -21.5 | 0.6615384615384621 | 1 |
| vsiRNA12309 | Sotub07g017980 | Sotub07g017980 | LHB1B1 | Chlorophyll a-b binding protein 4, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.324115619955647 | 248 | 275 | 263 | -32.5 | -21.3 | 0.655384615384615 | 0 |
| vsiRNA12316 | Sotub02g017370 | Sotub02g017370 | LHB1B1 | Chlorophyll a-b binding protein 1B, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.0076817679167197105 | 457 | 475 | 467 | -32.6 | -24.3 | 0.7453987730061351 | 3 |
| vsiRNA12316 | Sotub03g006080 | Sotub03g006080 | Sotub03g006080.1.1 | Chlorophyll a-b binding protein 3C, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.036489379671746 | 409 | 427 | 419 | -32.6 | -24.2 | 0.7423312883435581 | 3 |
| vsiRNA12316 | Sotub08g016800 | Sotub08g016800 | Sotub08g016800.1.1 | Chlorophyll a-b binding protein 3C, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.16960919753916 | 325 | 343 | 335 | -32.6 | -22.2 | 0.680981595092024 | 3 |
| vsiRNA12316 | Sotub03g005980 | Sotub03g005980 | Sotub03g005980.1.1 | Chlorophyll a-b binding protein 3C-like | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.00457489989577164 | 418 | 436 | 428 | -32.6 | -24.2 | 0.7423312883435581 | 3 |
| vsiRNA12323 | Sotub03g027760 | Sotub03g027760 | DXR | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 16.1.1.2 secondary metabolism.isoprenoids.non-mevalonate pathway.DXR | 29.4 protein.postranslational modification | 2 | 0.0210894451757768 | 1076 | 1097 | 1088 | -35.7 | -24.8 | 0.694677871148459 | 2 |
| vsiRNA12353 | Sotub03g022780 | Sotub03g022780 | Sotub03g022780.1.1 | Unknown Protein | 35.2 not assigned.unknown | 1 | 0.0036379668992292404 | 159 | 178 | 170 | -26.8 | -21 | 0.7835820895522391 | 3 |
| vsiRNA12353 | Sotub07g007430 | Sotub07g007430 | PAT23 | Ankyrin repeat-containing protein-like | 26.27 misc.calcineurin-like phosphoesterase family protein | 27.3.36 RNA.regulation of transcription.argonaute transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 31.1 cell.organisation | 2 | 0.40572004115577703 | 1585 | 1605 | 1596 | -26.8 | -18.2 | 0.67910447761194 | 2 |
| vsiRNA12362 | Sotub01g024620 | Sotub01g024620 | LNK2 | Os01g0498200 protein (Fragment) | 35.2 not assigned.unknown | 2 | 0.298851835007349 | 609 | 629 | 620 | -30.2 | -19.68 | 0.651655629139073 | 3 |
| vsiRNA12373 | Sotub12g010240 | Sotub12g010240 | VPS2.1 | Charged multivesicular body protein 2a | 27.3.71 RNA.regulation of transcription.SNF7 | 2 | 0.0337304068047043 | 361 | 382 | 372 | -33.4 | -26.1 | 0.7814371257485031 | 0 |
| vsiRNA12373 | Sotub08g013640 | Sotub08g013640 | TALE | Homeobox protein knotted-1-like 3 | 27.3.22 RNA.regulation of transcription.homeobox transcription factor family (HB) | 2 | 0.20806075130190402 | 149 | 169 | 160 | -33.4 | -23 | 0.6886227544910181 | 3 |
| vsiRNA12376 | PGSC0003DMC400057067 | PGSC0003DMG400034963 | PGSC0003DMG400034963 | Conserved gene of unknown function | 20.1.7.12 stress.biotic.PR-proteins.PR12 (plant defensins) | 3 | 0.0219150376130296 | 566 | 587 | 577 | -36.8 | -25.3 | 0.6875 | 1 |
| vsiRNA12392 | Sotub01g031270 | Sotub01g031270 | NTMC2T4 | Syt1 synaptotagmin Ca2+-dependent lipid-binding protein putati (IC) | 30.3 signalling.calcium | 2 | 0.19575211846728202 | 1281 | 1299 | 1291 | -32.5 | -21.5 | 0.6615384615384621 | 3 |
| vsiRNA12398 | Sotub07g023620 | Sotub07g023620 | FUG1 | Translation initiation factor IF-2 | 29.2.3 protein.synthesis.initiation | 3 | 0.14864164808667202 | 1282 | 1301 | 1293 | -32.6 | -22.2 | 0.680981595092024 | 2 |
| vsiRNA12404 | Sotub10g014510 | Sotub10g014510 | RBG7 | RNA-binding glycine-rich protein-1b | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 2 | 0.32905373469276 | 134 | 154 | 145 | -35.8 | -23.6 | 0.659217877094972 | 2 |
| vsiRNA12404 | Sotub01g013140 | Sotub01g013140 | RFC3 | 30S ribosomal protein S6 | 29.2.1.1.3.1.6 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.176701908752554 | 652 | 674 | 663 | -35.8 | -25.1 | 0.7011173184357541 | 3 |
| vsiRNA12413 | Sotub08g006230 | Sotub08g006230 | ABCI7 | FeS assembly protein SufD | 34.16 transport.ABC transporters and multidrug resistance systems | 2 | 0.38078248470757703 | 489 | 514 | 505 | -30.2 | -19.8 | 0.655629139072848 | 1 |
| vsiRNA12413 | Sotub02g011200 | Sotub02g011200 | GRDP1 | Hypothetical YFW family protein 5 | 35.1.40 not assigned.no ontology.glycine rich proteins | 2 | 0.323308405511658 | 2140 | 2167 | 2158 | -30.2 | -20.1 | 0.6655629139072851 | 2 |
| vsiRNA12431 | Sotub11g023900 | Sotub11g023900 | ALB3 | Inner membrane protein oxaA | 29.3.3 protein.targeting.chloroplast | 31.2.5 cell.division.plastid | 1 | 0.0548447819624294 | 33 | 57 | 48 | -32.1 | -22 | 0.685358255451713 | 3 |
| vsiRNA12446 | Sotub06g020670 | Sotub06g020670 | AKHSDH1 | Bifunctional aspartokinase/homoserine dehydrogenase I | 13.1.3.6.1.1 amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase | 13.1.3.6.1.10 amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase | 2 | 0.116290619741876 | 1782 | 1801 | 1792 | -33.7 | -22.4 | 0.664688427299703 | 3 |
| vsiRNA12452 | PGSC0003DMC400037632 | PGSC0003DMG400021704 | PGSC0003DMG400021704 | Conserved gene of unknown function | 17.5.1.2 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase | 31.1 cell.organisation | 0 | 0.0600025874802446 | 171 | 194 | 184 | -30.9 | -20.1 | 0.650485436893204 | 0 |
| vsiRNA12453 | Sotub01g048550 | Sotub01g048550 | XCT | Protein FAM50 homolog | 27.3.39 RNA.regulation of transcription.AtSR transcription factor family | 30.11 signalling.light | 33.99 development.unspecified | 2 | 0.41079603202116105 | 801 | 821 | 812 | -39.3 | -26.28 | 0.6687022900763361 | 3 |
| vsiRNA12456 | Sotub08g028050 | Sotub08g028050 | Sotub08g028050.1.1 | Zinc finger protein Mlo2 | 29.5 protein.degradation | 0 | 0.0515832055904477 | 938 | 960 | 951 | -26.8 | -17.9 | 0.667910447761194 | 3 |
| vsiRNA12467 | Sotub08g009120 | Sotub08g009120 | PSAN | Photosystem I reaction center subunit | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | 3 | 0.14412304076760402 | 368 | 389 | 379 | -37.4 | -24.6 | 0.657754010695187 | 3 |
| vsiRNA12472 | Sotub01g042610 | Sotub01g042610 | DIT2-1 | Transporter divalent anion Na+ symporter (DASS) family protein | 34.8 transport.metabolite transporters at the envelope membrane | 34.9 transport.metabolite transporters at the mitochondrial membrane | 0 | 0.0399805686709274 | 913 | 934 | 923 | -32 | -22.4 | 0.7 | 2 |
| vsiRNA12472 | Sotub11g025500 | Sotub11g025500 | Sotub11g025500.1.1 | Genomic DNA chromosome 5 P1 clone MWD9 | 35.2 not assigned.unknown | 0 | 0.00673249178539082 | 96 | 114 | 106 | -32 | -24.4 | 0.7625000000000001 | 2 |
| vsiRNA12472 | Sotub03g032290 | Sotub03g032290 | EMB2444 | Polyadenylate-binding protein | 27.1.1 RNA.processing.splicing | 27.4 RNA.RNA binding | 0 | 0.14892550055290402 | 801 | 821 | 811 | -32 | -21 | 0.65625 | 3 |
| vsiRNA12472 | Sotub12g014910 | Sotub12g014910 | Sotub12g014910.1.1 | NADH-ubiquinone oxidoreductase chain 6 (Fragment) | 35.2 not assigned.unknown | 0 | 0.0503237427641928 | 298 | 318 | 308 | -32 | -22.5 | 0.703125 | 3 |
| vsiRNA12472 | Sotub09g006790 | Sotub09g006790 | UPL3 | Ubiquitin-protein ligase 4 | 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT | 1 | 0.039297608591262 | 4487 | 4506 | 4497 | -32 | -22.4 | 0.7 | 1 |
| vsiRNA12472 | Sotub01g023490 | Sotub01g023490 | NIFU1 | NifU like protein | 29.8 protein.assembly and cofactor ligation | 2 | 0.0297272528846231 | 68 | 89 | 80 | -32 | -24.7 | 0.771875 | 0 |
| vsiRNA12472 | Sotub01g044370 | Sotub01g044370 | NPY1 | Transposon protein Mutator sub-class | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 30.11 signalling.light | 2 | 0.128247396484922 | 1535 | 1554 | 1545 | -32 | -23.7 | 0.740625 | 3 |
| vsiRNA12472 | MICRO.2674.C1 | MICRO.2674.C1 | MICRO.2674.C1 | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 3 | 0.254813272025308 | 332 | 357 | 348 | -32 | -21.2 | 0.6625 | 0 |
| vsiRNA12472 | Sotub10g028750 | Sotub10g028750 | SBT6.1 | Subtilisin-like protease | 26.2 misc.UDP glucosyl and glucoronyl transferases | 29.5.1 protein.degradation.subtilases | 33.1 development.storage proteins | 3 | 0.0677640587883965 | 1111 | 1132 | 1123 | -32 | -22.4 | 0.7 | 1 |
| vsiRNA12472 | Sotub09g026230 | Sotub09g026230 | Sotub09g026230.1.1 | 1-aminocyclopropane-1-carboxylate oxidase-like protein | 17.5.1.2 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase | 21.2 redox.ascorbate and glutathione | 3 | 0.156076477402483 | 927 | 947 | 937 | -32 | -21.6 | 0.675 | 2 |
| vsiRNA12477 | Sotub10g028070 | Sotub10g028070 | RCA | Ribulose-1 5-bisphosphate carboxylase/oxygenase activase 1 | 1.3.13 PS.calvin cycle.rubisco interacting | 3 | 0.0556358257085037 | 297 | 315 | 306 | -39.3 | -26.8 | 0.6819338422391861 | 2 |
| vsiRNA12478 | Sotub10g026660 | Sotub10g026660 | CAT2 | Amino acid transporter | 34.3 transport.amino acids | 2 | 0.022868728372912 | 3 | 21 | 12 | -28.2 | -22.6 | 0.8014184397163121 | 1 |
| vsiRNA12491 | Sotub08g020460 | Sotub08g020460 | Sotub08g020460.1.1 | Unknown Protein | 35.1 not assigned.no ontology | 2 | 0.189526247195646 | 367 | 387 | 378 | -32.4 | -21.3 | 0.657407407407407 | 3 |
| vsiRNA12500 | Sotub12g031950 | Sotub12g031950 | AGT1 | Serine-glyoxylate aminotransferase | 1.2.3 PS.photorespiration.aminotransferases peroxisomal | 13.1.1.3.11 amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase | 13.1.5.2.3 amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.serine glyoxylate aminotransferase | 2 | 0.247255065946504 | 386 | 414 | 398 | -34.5 | -23 | 0.6666666666666671 | 1 |
| vsiRNA12516 | Sotub04g012600 | Sotub04g012600 | CHLH | Magnesium chelatase H subunit | 16.2.1.10 secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD | 19.10 tetrapyrrole synthesis.magnesium chelatase | 2 | 0.20900851683016403 | 4044 | 4065 | 4055 | -42 | -28.1 | 0.669047619047619 | 3 |
| vsiRNA12525 | Sotub07g019380 | Sotub07g019380 | Sotub07g019380.1.1 | Unknown Protein | 27.3.44 RNA.regulation of transcription.chromatin remodeling factors | 2 | 0.10060421330256401 | 359 | 384 | 372 | -34.3 | -24.4 | 0.711370262390671 | 0 |
| vsiRNA12531 | Sotub12g011480 | Sotub12g011480 | LHB1B1 | Chlorophyll a-b binding protein 37, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.122864872654573 | 536 | 559 | 550 | -45 | -29.4 | 0.6533333333333331 | 3 |
| vsiRNA12540 | Sotub01g045870 | Sotub01g045870 | NIR1 | Nitrite reductase | 12.1.2 N-metabolism.nitrate metabolism.nitrite reductase | 2 | 0.46077547211343706 | 144 | 163 | 154 | -29.8 | -20.9 | 0.701342281879195 | 3 |
| vsiRNA12542 | Sotub06g023670 | Sotub06g023670 | MBD10 | Methyl-CpG binding domain containing protein expressed | 27.3.59 RNA.regulation of transcription.methyl binding domain proteins | 2 | 0.0019259990466714602 | 289 | 309 | 300 | -32.7 | -30.3 | 0.9266055045871561 | 2 |
| vsiRNA12555 | Sotub03g027900 | Sotub03g027900 | CAS | Extracellular calcium sensing receptor | 26.23 misc.rhodanese | 2 | 0.17455697763549802 | 953 | 977 | 963 | -24.9 | -17 | 0.6827309236947791 | 2 |
| vsiRNA12596 | Sotub11g007120 | Sotub11g007120 | RPL6A | 60S ribosomal protein L6 | 29.2.1.2.2.6 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.167101561448357 | 560 | 585 | 571 | -33.4 | -22.1 | 0.6616766467065871 | 3 |
| vsiRNA12644 | Sotub02g029110 | Sotub02g029110 | RBCS-1A | Ribulose bisphosphate carboxylase small chain | 1.3.2 PS.calvin cycle.rubisco small subunit | 26.10 misc.cytochrome P450 | 34.3 transport.amino acids | 2 | 0.0141951196276943 | 257 | 277 | 268 | -34.9 | -27.3 | 0.7822349570200571 | 1 |
| vsiRNA12647 | Sotub06g019440 | Sotub06g019440 | PSBS | Chloroplast photosystem II-associated protein | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 2 | 0.211267021139412 | 460 | 480 | 470 | -30.5 | -21.7 | 0.711475409836065 | 1 |
| vsiRNA12654 | TC218757 | TC218757 | TC218757 | NA | 35.2 not assigned.unknown | 2 | 0.0028552827145458303 | 326 | 346 | 337 | -39.3 | -40.9 | 1 | 0 |
| vsiRNA12668 | Sotub12g026810 | Sotub12g026810 | RD21A | Cathepsin B-like cysteine proteinase | 29.5.3 protein.degradation.cysteine protease | 34.19.1 transport.major intrinsic proteins.PIP | 2 | 0.27403181160014 | 741 | 761 | 751 | -31.1 | -20.8 | 0.6688102893890681 | 2 |
| vsiRNA12670 | Sotub02g029110 | Sotub02g029110 | RBCS-1A | Ribulose bisphosphate carboxylase small chain | 1.3.2 PS.calvin cycle.rubisco small subunit | 26.10 misc.cytochrome P450 | 34.3 transport.amino acids | 3 | 0.0780156491588138 | 157 | 179 | 169 | -32.7 | -21.8 | 0.6666666666666671 | 2 |
| vsiRNA12673 | Sotub06g028510 | Sotub06g028510 | BAG5 | Bcl-2-associated athanogene-like protein | 17.4.2 hormone metabolism.cytokinin.signal transduction | 19.4 tetrapyrrole synthesis.ALA dehydratase | 31.4 cell.vesicle transport | 33.99 development.unspecified | 2 | 0.6655561313672831 | 725 | 744 | 735 | -32.3 | -21 | 0.65015479876161 | 2 |
| vsiRNA12673 | Sotub01g034510 | Sotub01g034510 | FLK | Poly(RC) binding protein 3 | 26.28 misc.GDSL-motif lipase | 27.4 RNA.RNA binding | 29.2.2 protein.synthesis.ribosome biogenesis | 30.5 signalling.G-proteins | 2 | 0.14552255691072702 | 1999 | 2019 | 2010 | -32.3 | -23.8 | 0.7368421052631581 | 3 |
| vsiRNA12687 | PGSC0003DMC400041675 | PGSC0003DMG401024092 | PGSC0003DMG401024092 | Ubiquitin interaction motif-containing protein | 26.9 misc.glutathione S transferases | 29.5.11 protein.degradation.ubiquitin | 1 | 0.0409214564962054 | 161 | 181 | 172 | -37.4 | -24.4 | 0.6524064171122991 | 3 |
| vsiRNA12692 | Sotub05g009940 | Sotub05g009940 | Sotub05g009940.1.1 | RING finger protein 44 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 2 | 0.271953031676107 | 321 | 343 | 332 | -30.6 | -20.16 | 0.658823529411765 | 3 |
| vsiRNA12693 | Sotub07g006160 | Sotub07g006160 | AtIF3- 4 | Translation initiation factor IF-3 | 28.1 DNA.synthesis/chromatin structure | 29.2.3 protein.synthesis.initiation | 1 | 0.030272174771324798 | 395 | 415 | 406 | -29.5 | -19.88 | 0.673898305084746 | 3 |
| vsiRNA12693 | Sotub04g008750 | Sotub04g008750 | GAPA1 | Glyceraldehyde-3-phosphate dehydrogenase | 1.3.4 PS.calvin cycle.GAP | 20.1 stress.biotic | 29.2.1.2.2.10 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.0501665281898594 | 671 | 691 | 682 | -29.5 | -21.6 | 0.732203389830508 | 2 |
| vsiRNA12714 | Sotub04g028540 | Sotub04g028540 | Sotub04g028540.1.1 | Unknown Protein | 35.1 not assigned.no ontology | 2 | 0.36168321407846 | 385 | 406 | 396 | -40.5 | -26.4 | 0.651851851851852 | 3 |
| vsiRNA12717 | Sotub03g018880 | Sotub03g018880 | AtOR | Chaperone protein dnaJ-like | 29.6 protein.folding | 2 | 0.457682956468323 | 616 | 642 | 633 | -33.6 | -23 | 0.68452380952381 | 0 |
| vsiRNA12728 | Sotub04g009700 | Sotub04g009700 | T26I12.60 | Lipase-like protein | 11.9.2.2 lipid metabolism.lipid degradation.lipases.acylglycerol lipase | 2 | 0.20653253371828 | 188 | 219 | 210 | -29.2 | -19.3 | 0.660958904109589 | 1 |
| vsiRNA12728 | MICRO.2346.C11 | MICRO.2346.C11 | MICRO.2346.C11 | NA | 35.2 not assigned.unknown | 35.2 not assigned.unknown | 2 | 0.278171581882595 | 839 | 859 | 850 | -29.2 | -19.3 | 0.660958904109589 | 2 |
| vsiRNA12728 | MICRO.2346.C6 | MICRO.2346.C6 | MICRO.2346.C6 | NA | 33.99 development.unspecified | 33.99 development.unspecified | 2 | 0.20346724578396502 | 813 | 833 | 824 | -29.2 | -19.3 | 0.660958904109589 | 2 |
| vsiRNA12728 | TC211501 | TC211501 | TC211501 | NA | 35.2 not assigned.unknown | 2 | 0.18754608825409 | 693 | 713 | 704 | -29.2 | -19.3 | 0.660958904109589 | 2 |
| vsiRNA12733 | Sotub05g025750 | Sotub05g025750 | Sotub05g025750.1.1 | Unknown Protein | 20.2.99 stress.abiotic.unspecified | 3 | 0.105383045413524 | 147 | 175 | 166 | -35.8 | -24.9 | 0.6955307262569831 | 1 |
| vsiRNA12742 | Sotub06g022740 | Sotub06g022740 | WRKY | WRKY transcription factor 1 | 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family | 2 | 0.49074711934011 | 1495 | 1515 | 1506 | -33.7 | -22.3 | 0.661721068249258 | 2 |
| vsiRNA12745 | Sotub01g005740 | Sotub01g005740 | ZKT | Tetratricopeptide TPR_2 repeat protein | 27.1.20 RNA.processing.degradation dicer | 1 | 0.0034506632770166 | 355 | 379 | 366 | -33.5 | -25.8 | 0.770149253731343 | 0 |
| vsiRNA12745 | Sotub03g018570 | Sotub03g018570 | pdl1 | Pterin-4-alpha-carbinolamine dehydratase | 2.2.2.6 major CHO metabolism.degradation.starch.transporter | 2 | 0.5994823242663411 | 370 | 395 | 382 | -33.5 | -22 | 0.6567164179104481 | 0 |
| vsiRNA12759 | Sotub10g005530 | Sotub10g005530 | Sotub10g005530.1.1 | 40S ribosomal protein S8 | 29.2.1.2.1.8 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.18373403818661302 | 371 | 393 | 384 | -33.6 | -22.9 | 0.6815476190476191 | 2 |
| vsiRNA12759 | Sotub11g020610 | Sotub11g020610 | F12C20.11 | F-box family protein | 27.3.28 RNA.regulation of transcription.squamosa promoter binding protein family (SBP) | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 2 | 0.127520419332102 | 956 | 976 | 967 | -33.6 | -22.5 | 0.6696428571428571 | 2 |
| vsiRNA12778 | Sotub11g010910 | Sotub11g010910 | ATJ2 | DNAJ chaperone | 20.2.1 stress.abiotic.heat | 2 | 0.0390068598615299 | 904 | 924 | 916 | -32.8 | -22.9 | 0.698170731707317 | 2 |
| vsiRNA12779 | Sotub02g029110 | Sotub02g029110 | RBCS-1A | Ribulose bisphosphate carboxylase small chain | 1.3.2 PS.calvin cycle.rubisco small subunit | 26.10 misc.cytochrome P450 | 34.3 transport.amino acids | 3 | 0.0751001408712916 | 50 | 71 | 62 | -30 | -20.6 | 0.6866666666666671 | 2 |
| vsiRNA12784 | Sotub01g043670 | Sotub01g043670 | PMDH1 | Malate dehydrogenase | 6.3 gluconeogenesis / glyoxylate cycle.malate dehydrogenase | 10.1.5 cell wall.precursor synthesis.UXS | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 3 | 0.0652450207323818 | 65 | 87 | 78 | -35.9 | -24.5 | 0.6824512534818941 | 2 |
| vsiRNA12785 | Sotub08g018420 | Sotub08g018420 | Sotub08g018420.1.1 | CHY zinc finger family protein expressed | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 0 | 0.011904208931532 | 81 | 103 | 94 | -36.3 | -25.5 | 0.7024793388429751 | 1 |
| vsiRNA12805 | Sotub03g030320 | Sotub03g030320 | PNSB1 | Glycosyl transferase family 9 | 17.3.1.2.1 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT1 | 2 | 0.292475756797133 | 867 | 886 | 877 | -32.4 | -22.4 | 0.6913580246913581 | 3 |
| vsiRNA12805 | Sotub12g030010 | Sotub12g030010 | Sotub12g030010.1.1 | Unknown Protein | 35.2 not assigned.unknown | 3 | 0.0743739661460227 | 157 | 176 | 167 | -32.4 | -23.1 | 0.712962962962963 | 3 |
| vsiRNA12824 | Sotub04g026430 | Sotub04g026430 | SOL1 | Carboxypeptidase D | 29.5 protein.degradation | 3 | 0.0416849418535562 | 1133 | 1163 | 1145 | -38 | -25.6 | 0.6736842105263161 | 2 |
| vsiRNA12843 | Sotub05g020800 | Sotub05g020800 | Sotub05g020800.1.1 | Strictosidine synthase family protein | 16.4.1 secondary metabolism.N misc.alkaloid-like | 2 | 0.105522299219304 | 138 | 158 | 149 | -34.9 | -24.4 | 0.6991404011461321 | 3 |
| vsiRNA12850 | Sotub10g018180 | Sotub10g018180 | CML42 | Calmodulin-like protein | 30.3 signalling.calcium | 2 | 0.047053394013561296 | 234 | 254 | 244 | -32.9 | -24.6 | 0.747720364741641 | 1 |
| vsiRNA12878 | Sotub10g007760 | Sotub10g007760 | POLD3 | DNA polymerase delta subunit 3 | 10.1.5 cell wall.precursor synthesis.UXS | 26.27 misc.calcineurin-like phosphoesterase family protein | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 31.3 cell.cycle | 0 | 0.0141802809670477 | 1407 | 1436 | 1419 | -36 | -24.6 | 0.683333333333333 | 3 |
| vsiRNA12888 | Sotub11g015360 | Sotub11g015360 | TCP | TCP family transcription factor | 17.2.2 hormone metabolism.auxin.signal transduction | 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated | 27.3.29 RNA.regulation of transcription.TCP transcription factor family | 0 | 0.0568455296411228 | 891 | 911 | 902 | -40.8 | -27.6 | 0.676470588235294 | 3 |
| vsiRNA12892 | PGSC0003DMC400057067 | PGSC0003DMG400034963 | PGSC0003DMG400034963 | Conserved gene of unknown function | 20.1.7.12 stress.biotic.PR-proteins.PR12 (plant defensins) | 3 | 0.0445033559652142 | 334 | 360 | 351 | -34.7 | -24.1 | 0.6945244956772331 | 2 |
| vsiRNA12892 | PGSC0003DMC400065211 | PGSC0003DMG400043107 | PGSC0003DMG400043107 | Conserved gene of unknown function | 11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 3 | 0.0434912376081931 | 90 | 111 | 102 | -34.7 | -24.1 | 0.6945244956772331 | 2 |
| vsiRNA12895 | Sotub04g016760 | Sotub04g016760 | CPK1 | Calcium dependent protein kinase | 29.4 protein.postranslational modification | 30.3 signalling.calcium | 1 | 0.0262040723477556 | 1139 | 1158 | 1149 | -34.8 | -23.2 | 0.6666666666666671 | 3 |
| vsiRNA12898 | Sotub03g026690 | Sotub03g026690 | HD-ZIP | Homeobox-leucine zipper-like protein | 27.3.22 RNA.regulation of transcription.homeobox transcription factor family (HB) | 2 | 0.040006865371549696 | 390 | 414 | 402 | -34.5 | -23.2 | 0.6724637681159421 | 1 |
| vsiRNA12904 | Sotub05g009850 | Sotub05g009850 | SULTR1;1 | High affinity sulfate transporter 1 | 16.1.3.3 secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase | 30.11 signalling.light | 31.4 cell.vesicle transport | 34.6 transport.sulphate | 2 | 0.0028552827145458303 | 1348 | 1368 | 1359 | -27.5 | -25 | 0.9090909090909091 | 2 |
| vsiRNA12915 | Sotub10g028070 | Sotub10g028070 | RCA | Ribulose-1 5-bisphosphate carboxylase/oxygenase activase 1 | 1.3.13 PS.calvin cycle.rubisco interacting | 2 | 0.34817820126922705 | 1157 | 1181 | 1169 | -31.4 | -20.8 | 0.6624203821656051 | 1 |
| vsiRNA12921 | Sotub09g028040 | Sotub09g028040 | ABCG32 | ATP-binding cassette transporter | 34.16 transport.ABC transporters and multidrug resistance systems | 3 | 0.005226746238037871 | 1652 | 1673 | 1664 | -30.3 | -21.9 | 0.7227722772277231 | 3 |
| vsiRNA12925 | Sotub10g005350 | Sotub10g005350 | LHCA2 | Chlorophyll a-b binding protein 7, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.2.1 PS.lightreaction.photosystem I.LHC-I | 2 | 0.0978163758290949 | 404 | 425 | 416 | -35.4 | -24.3 | 0.6864406779661021 | 3 |
| vsiRNA12950 | Sotub04g014680 | Sotub04g014680 | ERD15 | Early response to dehydration 15-like protein (Fragment) | 20.2.3 stress.abiotic.drought/salt | 2 | 0.585420037076363 | 65 | 86 | 75 | -30.7 | -20.9 | 0.680781758957655 | 3 |
| vsiRNA12956 | Sotub12g010270 | Sotub12g010270 | PSBX | Chloroplast photosystem II subunit X (Fragment) | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 3 | 0.0565655645389589 | 282 | 299 | 291 | -32.3 | -21.5 | 0.6656346749226011 | 2 |
| vsiRNA12970 | Sotub05g005880 | Sotub05g005880 | T27E13.16 | Pentatricopeptide repeat-containing protein At2g30100, chloroplastic | 29.5.11.1 protein.degradation.ubiquitin.ubiquitin | 2 | 0.0602405202746374 | 373 | 394 | 384 | -39.8 | -29.2 | 0.733668341708543 | 2 |
| vsiRNA12986 | Sotub11g029030 | Sotub11g029030 | StGA20ox3 | Gibberellin 20-oxidase-3 | 17.5.1 hormone metabolism.ethylene.synthesis-degradation | 1 | 0.0317652844409526 | 872 | 896 | 887 | -36 | -23.68 | 0.657777777777778 | 3 |
| vsiRNA12992 | Sotub06g032750 | Sotub06g032750 | CYP19-4 | Peptidyl-prolyl cis-trans isomerase | 29.4 protein.postranslational modification | 31.3.1 cell.cycle.peptidylprolyl isomerase | 2 | 0.186395261337848 | 189 | 220 | 211 | -37.3 | -25.3 | 0.67828418230563 | 0 |
| vsiRNA12992 | Sotub07g019790 | Sotub07g019790 | PORA | Protochlorophyllide reductase | 19.14 tetrapyrrole synthesis.protochlorophyllide reductase | 2 | 0.189526247195646 | 695 | 714 | 705 | -37.3 | -25.3 | 0.67828418230563 | 2 |
| vsiRNA12997 | Sotub11g020250 | Sotub11g020250 | F26A9.14 | Nuclear transport factor 2 (NTF2)-like protein | 29.3.1 protein.targeting.nucleus | 2 | 0.412478375926273 | 513 | 549 | 524 | -34.8 | -23.5 | 0.675287356321839 | 0 |
| vsiRNA13006 | Sotub02g023810 | Sotub02g023810 | APR1 | Phosphoadenosine phosphosulfate reductase | 14.2 S-assimilation.APR | 3 | 0.0812083216047377 | 685 | 705 | 695 | -25.8 | -18.5 | 0.7170542635658911 | 3 |
| vsiRNA13045 | Sotub05g013120 | Sotub05g013120 | AOR | Alcohol dehydrogenase zinc-containing | 26.7 misc.oxidases - copper, flavone etc | 2 | 0.0498695715057176 | 693 | 714 | 704 | -32.5 | -21.5 | 0.6615384615384621 | 3 |
| vsiRNA13049 | Sotub02g014560 | Sotub02g014560 | CCT1 | Choline-phosphate cytidylyltransferase B | 11.3.6 lipid metabolism.phospholipid synthesis.choline-phosphate cytidylyltransferase | 2 | 0.0518621802332105 | 754 | 780 | 771 | -35.4 | -23.9 | 0.675141242937853 | 1 |
| vsiRNA13049 | Sotub04g029110 | Sotub04g029110 | GATA | GATA transcription factor 25 | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.14552255691072702 | 720 | 748 | 739 | -35.4 | -23.2 | 0.655367231638418 | 2 |
| vsiRNA13067 | Sotub08g021850 | Sotub08g021850 | F3C3.2 | Catalytic/ coenzyme binding protein | 27.3.99 RNA.regulation of transcription.unclassified | 0 | 0.0149020300744523 | 190 | 209 | 201 | -33.7 | -22.1 | 0.6557863501483681 | 3 |
| vsiRNA13072 | Sotub05g025260 | Sotub05g025260 | SBPASE | Fructose-1 6-bisphosphatase class 1 | 1.3.9 PS.calvin cycle.sedoheptulose bisphosphatase | 13.2.3.2 amino acid metabolism.degradation.aspartate family.threonine | 26.8 misc.nitrilases, nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases | 2 | 0.129305456758942 | 643 | 667 | 658 | -37.7 | -26.6 | 0.7055702917771881 | 2 |
| vsiRNA13075 | Sotub04g023440 | Sotub04g023440 | F1M20.13 | Exocyst subunit Exo70-interacting protein Roh1 (Fragment) | 20.2.1 stress.abiotic.heat | 2 | 0.0433720134182543 | 213 | 245 | 236 | -34.1 | -24.9 | 0.730205278592375 | 0 |
| vsiRNA13089 | Sotub12g030010 | Sotub12g030010 | Sotub12g030010.1.1 | Unknown Protein | 35.2 not assigned.unknown | 2 | 0.553511413209412 | 109 | 137 | 128 | -32.3 | -23.2 | 0.718266253869969 | 1 |
| vsiRNA13089 | Sotub09g029990 | Sotub09g029990 | Sotub09g029990.1.1 | Unknown Protein | 27.3.6 RNA.regulation of transcription.basic helix-loop-helix family (bHLH) | 2 | 0.47687811628542504 | 349 | 371 | 362 | -32.3 | -22.8 | 0.7058823529411771 | 3 |
| vsiRNA13089 | Sotub01g048700 | Sotub01g048700 | Sotub01g048700.1.1 | Cold shock protein-1 | 20.2.2 stress.abiotic.cold | 27.3.75 RNA.regulation of transcription.GRP | 30.2.11 signalling.receptor kinases.leucine rich repeat XI | 30.2.12 signalling.receptor kinases.leucine rich repeat XII | 3 | 0.5313507141440921 | 286 | 308 | 299 | -32.3 | -21.2 | 0.656346749226006 | 3 |
| vsiRNA13095 | Sotub02g019170 | Sotub02g019170 | MEE62 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 | 29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII | 30.2.7 signalling.receptor kinases.leucine rich repeat VII | 0 | 0.0708339422776505 | 1800 | 1822 | 1811 | -34.2 | -22.9 | 0.6695906432748541 | 2 |
| vsiRNA13098 | Sotub08g020930 | Sotub08g020930 | CPuORF24 | Cyclin-dependent kinase F-4 | 29.4 protein.postranslational modification | 2 | 0.34566011252598405 | 673 | 696 | 684 | -30.6 | -20.5 | 0.6699346405228761 | 2 |
| vsiRNA13104 | Sotub01g049040 | Sotub01g049040 | HPR | Glyoxylate/hydroxypyruvate reductase B | 1.2.6 PS.photorespiration.hydroxypyruvate reductase | 13.2.5.1 amino acid metabolism.degradation.serine-glycine-cysteine group.serine | 13.2.5.2 amino acid metabolism.degradation.serine-glycine-cysteine group.glycine | 2 | 0.183207790177478 | 963 | 981 | 973 | -38.5 | -26 | 0.6753246753246751 | 3 |
| vsiRNA13121 | Sotub09g021500 | Sotub09g021500 | BPM1 | BTB/POZ domain containing protein expressed | 10.1.5 cell wall.precursor synthesis.UXS | 26.27 misc.calcineurin-like phosphoesterase family protein | 27.3.1 RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family | 29.5.11.4.5.2 protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ | 1 | 0.010686510690718699 | 139 | 159 | 150 | -30.6 | -21.5 | 0.702614379084967 | 2 |
| vsiRNA13135 | Sotub05g029260 | Sotub05g029260 | LHCA1 | Chlorophyll a-b binding protein 6A, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 1.1.2.1 PS.lightreaction.photosystem I.LHC-I | 3 | 6.548421796859221E-4 | 505 | 526 | 517 | -38.3 | -29.6 | 0.772845953002611 | 3 |
| vsiRNA13145 | Sotub02g015280 | Sotub02g015280 | T15B16.17 | Cathepsin B | 29.5.3 protein.degradation.cysteine protease | 3 | 0.044192657757709496 | 915 | 934 | 925 | -35.7 | -24.4 | 0.6834733893557421 | 2 |
| vsiRNA13148 | Sotub09g015620 | Sotub09g015620 | (SA):GSNO | Alcohol dehydrogenase | 5.3 fermentation.ADH | 25 C1-metabolism | 26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase | 2 | 0.136155955479472 | 581 | 604 | 595 | -29.3 | -19.3 | 0.6587030716723551 | 1 |
| vsiRNA13150 | Sotub10g022440 | Sotub10g022440 | Sotub10g022440.1.1 | Unknown Protein | 19.4 tetrapyrrole synthesis.ALA dehydratase | 3 | 0.12892785812427 | 186 | 206 | 197 | -28.8 | -19.1 | 0.6631944444444451 | 3 |
| vsiRNA13152 | Sotub04g034870 | Sotub04g034870 | TUBB1 | Tubulin beta-1 chain | 11.1.8 lipid metabolism.FA synthesis and FA elongation.acyl CoA ligase | 16.2 secondary metabolism.phenylpropanoids | 31.1 cell.organisation | 2 | 0.19882513405157 | 1194 | 1217 | 1205 | -38.4 | -25.4 | 0.661458333333333 | 2 |
| vsiRNA13172 | Sotub06g030840 | Sotub06g030840 | TIP1-1 | Aquaporin-like protein | 21.4 redox.glutaredoxins | 27.1.20 RNA.processing.degradation dicer | 34.19.2 transport.major intrinsic proteins.TIP | 2 | 0.130736496625099 | 417 | 440 | 431 | -31.4 | -21.1 | 0.671974522292994 | 0 |
| vsiRNA13175 | Sotub01g006500 | Sotub01g006500 | T11I18.5 | Casein kinase-like protein | 29.4 protein.postranslational modification | 0 | 0.0248966909551922 | 585 | 606 | 597 | -33.5 | -23.2 | 0.6925373134328361 | 2 |
| vsiRNA13175 | Sotub10g014540 | Sotub10g014540 | RBG8 | Glycine-rich RNA-binding protein | 17.2.2 hormone metabolism.auxin.signal transduction | 27.3.75 RNA.regulation of transcription.GRP | 27.4 RNA.RNA binding | 3 | 0.0209513717247173 | 385 | 404 | 396 | -33.5 | -24.5 | 0.73134328358209 | 1 |
| vsiRNA13175 | Sotub01g048700 | Sotub01g048700 | Sotub01g048700.1.1 | Cold shock protein-1 | 20.2.2 stress.abiotic.cold | 27.3.75 RNA.regulation of transcription.GRP | 30.2.11 signalling.receptor kinases.leucine rich repeat XI | 30.2.12 signalling.receptor kinases.leucine rich repeat XII | 3 | 0.083088416625253 | 301 | 320 | 312 | -33.5 | -22.3 | 0.6656716417910451 | 2 |
| vsiRNA13187 | Sotub01g022470 | Sotub01g022470 | AHP1 | Histidine-containing phosphotransfer protein | 17.4.2 hormone metabolism.cytokinin.signal transduction | 30.1 signalling.in sugar and nutrient physiology | 30.10 signalling.phosphorelay | 2 | 0.008836626771715261 | 193 | 214 | 205 | -38.5 | -30 | 0.779220779220779 | 3 |
| vsiRNA13192 | Sotub10g009470 | Sotub10g009470 | TPT | Glucose-6-phosphate/phosphate translocator 2 | 2.2.2.6 major CHO metabolism.degradation.starch.transporter | 27.3.35 RNA.regulation of transcription.bZIP transcription factor family | 34.8 transport.metabolite transporters at the envelope membrane | 2 | 0.38362016986323705 | 648 | 671 | 658 | -36.5 | -24 | 0.6575342465753421 | 3 |
| vsiRNA13218 | Sotub09g024050 | Sotub09g024050 | FRL4A | FRIGIDA (Fragment) | 10.5.4 cell wall.cell wall proteins.HRGP | 2 | 0.118219517186191 | 584 | 607 | 598 | -32.3 | -23.6 | 0.730650154798762 | 0 |
| vsiRNA13218 | Sotub01g032200 | Sotub01g032200 | UBC4 | Ubiquitin-conjugating enzyme h | 29.5.11.3 protein.degradation.ubiquitin.E2 | 2 | 0.007075570483644711 | 442 | 461 | 452 | -32.3 | -26.2 | 0.811145510835913 | 2 |
| vsiRNA13232 | Sotub01g039110 | Sotub01g039110 | APA1 | Aspartic proteinase 4 | 29.5.4 protein.degradation.aspartate protease | 2 | 0.27403181160014 | 387 | 406 | 399 | -26.7 | -18.1 | 0.6779026217228471 | 2 |
| vsiRNA13240 | Sotub01g049320 | Sotub01g049320 | IYO | RNA polymerase II-associated protein 1 | 35.2 not assigned.unknown | 2 | 0.218003915655777 | 1591 | 1613 | 1601 | -30.5 | -21.4 | 0.701639344262295 | 0 |
| vsiRNA13246 | Sotub03g031780 | Sotub03g031780 | CLPB1 | ATP-dependent clp protease ATP-binding subunit | 20.2.1 stress.abiotic.heat | 29.5.5 protein.degradation.serine protease | 2 | 0.288418022628441 | 2403 | 2429 | 2420 | -39.8 | -27 | 0.678391959798995 | 2 |
| vsiRNA13246 | Sotub01g028130 | Sotub01g028130 | Nog1-1 | Nucleolar GTP-binding protein | 29.3.4.3 protein.targeting.secretory pathway.vacuole | 30.5 signalling.G-proteins | 2 | 0.16748916166944303 | 1288 | 1310 | 1302 | -39.8 | -26.9 | 0.675879396984925 | 3 |
| vsiRNA13248 | Sotub01g040390 | Sotub01g040390 | HSP70-10 | Chaperone DnaK | 20.2.1 stress.abiotic.heat | 2 | 0.18373403818661302 | 346 | 371 | 361 | -36.5 | -24.3 | 0.6657534246575341 | 0 |
| vsiRNA13250 | Sotub08g005960 | Sotub08g005960 | RGGA | Nuclear RNA binding protein (Fragment) | 27.4 RNA.RNA binding | 2 | 0.0742979939761901 | 528 | 548 | 539 | -35.3 | -25.4 | 0.7195467422096321 | 3 |
| vsiRNA13264 | Sotub03g019370 | Sotub03g019370 | GLT1 | Glutamate synthase (Ferredoxin) | 12.2.1.1 N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent | 12.2.1.2 N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent | 2 | 0.0190939186618136 | 4027 | 4047 | 4038 | -35.7 | -25.8 | 0.7226890756302521 | 3 |
| vsiRNA13285 | Sotub10g019470 | Sotub10g019470 | SUVH1 | Histone-lysine N-methyltransferase | 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family | 2 | 0.0769411349128102 | 583 | 604 | 595 | -29.3 | -20.4 | 0.696245733788396 | 1 |
| vsiRNA13287 | Sotub01g006990 | Sotub01g006990 | RLK1 | S-receptor kinase-like | 26.16 misc.myrosinases-lectin-jacalin | 29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII | 30.2.17 signalling.receptor kinases.DUF 26 | 30.2.24 signalling.receptor kinases.S-locus glycoprotein like | 2 | 0.12575116890929702 | 2095 | 2115 | 2107 | -35 | -24.3 | 0.6942857142857141 | 2 |
| vsiRNA13287 | Sotub04g028370 | Sotub04g028370 | GeBP | Os09g0451700 protein (Fragment) | 27.3.49 RNA.regulation of transcription.GeBP like | 2 | 0.156687175447761 | 838 | 861 | 850 | -35 | -23.28 | 0.665142857142857 | 2 |
| vsiRNA13290 | Sotub01g008470 | Sotub01g008470 | dl3085w | Transferase transferring glycosyl groups | 3.5 minor CHO metabolism.others | 17.3.1.1.1 hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2 | 26.10 misc.cytochrome P450 | 0 | 0.0298011482817615 | 91 | 116 | 101 | -34.6 | -23.8 | 0.6878612716763011 | 2 |
| vsiRNA13316 | Sotub01g019550 | Sotub01g019550 | Sotub01g019550.1.1 | Photosystem II CP47 chlorophyll apoprotein | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | 29.5 protein.degradation | 0 | 0.00511367390331063 | 541 | 562 | 553 | -36 | -27.1 | 0.7527777777777781 | 1 |
| vsiRNA13335 | Sotub06g022580 | Sotub06g022580 | LHCB5 | Chlorophyll a-b binding protein, chloroplastic | 1.1.1.1 PS.lightreaction.photosystem II.LHC-II | 3 | 0.0272709688147821 | 315 | 335 | 326 | -37.4 | -26.1 | 0.697860962566845 | 3 |
| vsiRNA13338 | Sotub12g020730 | Sotub12g020730 | F15H18.24 | Peptidyl-tRNA hydrolase family protein | 29.2.2 protein.synthesis.ribosome biogenesis | 34.99 transport.misc | 2 | 0.19301686616961303 | 519 | 537 | 529 | -30.1 | -20.6 | 0.684385382059801 | 2 |
| vsiRNA13338 | Sotub01g047810 | Sotub01g047810 | FBA1 | Fructose-bisphosphate aldolase | 1.3.6 PS.calvin cycle.aldolase | 11.1.30 lipid metabolism.FA synthesis and FA elongation.pyruvate kinase | 3 | 0.0985515630501225 | 33 | 51 | 44 | -30.1 | -20.1 | 0.667774086378738 | 2 |
| vsiRNA13371 | PGSC0003DMC400013666 | PGSC0003DMG401007748 | T21H19_30 | Conserved gene of unknown function | 35.2 not assigned.unknown | 0 | 0.0197263123081369 | 167 | 188 | 178 | -36.1 | -25.2 | 0.6980609418282551 | 3 |
| vsiRNA13373 | Sotub03g006550 | Sotub03g006550 | T3A5.70 | Acidic leucine-rich nuclear phosphoprotein 32 family member A | 35.1 not assigned.no ontology | 3 | 0.0535643636694317 | 571 | 591 | 581 | -35.4 | -25.2 | 0.711864406779661 | 2 |
| vsiRNA13379 | Sotub07g021980 | Sotub07g021980 | bHLH | Transcription factor | 27.3.6 RNA.regulation of transcription.basic helix-loop-helix family (bHLH) | 0 | 0.11932906720077101 | 183 | 202 | 194 | -28.5 | -18.6 | 0.652631578947368 | 3 |
| vsiRNA13379 | Sotub10g018900 | Sotub10g018900 | PDC1 | Pyruvate decarboxylase | 5.2 fermentation.PDC | 2 | 0.0734921413131031 | 1285 | 1307 | 1296 | -28.5 | -21.1 | 0.7403508771929831 | 1 |
| vsiRNA13379 | Sotub01g040390 | Sotub01g040390 | HSP70-10 | Chaperone DnaK | 20.2.1 stress.abiotic.heat | 2 | 0.23377317659144403 | 141 | 161 | 152 | -28.5 | -19.6 | 0.6877192982456141 | 3 |
| vsiRNA13386 | Sotub10g028070 | Sotub10g028070 | RCA | Ribulose-1 5-bisphosphate carboxylase/oxygenase activase 1 | 1.3.13 PS.calvin cycle.rubisco interacting | 2 | 0.0417095145319349 | 605 | 629 | 620 | -31.5 | -22.4 | 0.711111111111111 | 2 |
| vsiRNA13389 | Sotub08g029020 | Sotub08g029020 | TALE | BEL1-like homeodomain protein 2 | 27.3.22 RNA.regulation of transcription.homeobox transcription factor family (HB) | 2 | 0.0734921413131031 | 907 | 930 | 921 | -39.3 | -25.9 | 0.6590330788804071 | 2 |
| vsiRNA13401 | Sotub01g045870 | Sotub01g045870 | NIR1 | Nitrite reductase | 12.1.2 N-metabolism.nitrate metabolism.nitrite reductase | 2 | 0.652987000118184 | 1254 | 1277 | 1265 | -32.1 | -20.9 | 0.651090342679128 | 0 |
| vsiRNA13466 | Sotub04g024990 | Sotub04g024990 | RPS2A | 30S ribosomal protein S5 | 29.2.1.2.1.2 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2 | 29.2.2 protein.synthesis.ribosome biogenesis | 2 | 0.16895737523685903 | 248 | 268 | 259 | -30.4 | -20.2 | 0.6644736842105261 | 3 |
| vsiRNA13472 | Sotub02g023810 | Sotub02g023810 | APR1 | Phosphoadenosine phosphosulfate reductase | 14.2 S-assimilation.APR | 3 | 0.0545658232680597 | 702 | 731 | 722 | -30.4 | -20.8 | 0.684210526315789 | 1 |
| vsiRNA13493 | Sotub01g025830 | Sotub01g025830 | T8H10.20 | Protein E03H4.4 partially confirmed by transcript evidence | 35.2 not assigned.unknown | 1 | 0.23897167492266103 | 1366 | 1386 | 1376 | -32 | -20.9 | 0.653125 | 3 |
| vsiRNA13495 | Sotub02g009530 | Sotub02g009530 | KIWI | Activated RNA polymerase II transcriptional coactivator p15 | 27.3.50 RNA.regulation of transcription.general transcription | 2 | 0.18606470827785102 | 177 | 198 | 188 | -28.9 | -19.1 | 0.660899653979239 | 3 |
| vsiRNA13522 | Sotub08g007240 | Sotub08g007240 | GGCT2;1 | Cation transport regulator-like protein 2 | 29.2.2 protein.synthesis.ribosome biogenesis | 34.14 transport.unspecified cations | 0 | 0.0071344264447144 | 534 | 553 | 545 | -28.9 | -21.2 | 0.73356401384083 | 2 |
| vsiRNA13523 | PGSC0003DMC400058964 | PGSC0003DMG400036860 | PGSC0003DMG400036860 | Gene of unknown function | 35.2 not assigned.unknown | 0 | 0.0050296797078595 | 283 | 304 | 295 | -30.1 | -23.4 | 0.777408637873754 | 1 |
| vsiRNA13523 | Sotub05g005190 | Sotub05g005190 | FAC19 | Pentatricopeptide repeat-containing protein | 17.8.1 hormone metabolism.salicylic acid.synthesis-degradation | 26.1 misc.misc2 | 27.3 RNA.regulation of transcription | 29.4 protein.postranslational modification | 33.99 development.unspecified | 0 | 0.010528528033946001 | 2015 | 2037 | 2028 | -30.1 | -22.4 | 0.744186046511628 | 2 |
| vsiRNA13534 | Sotub09g018440 | Sotub09g018440 | TOM2AH1 | mRNA clone RTFL01-33-D01 | 33.1 development.storage proteins | 1 | 9.78508207539086E-4 | 598 | 618 | 608 | -30.6 | -24.8 | 0.8104575163398691 | 1 |
| vsiRNA13539 | Sotub03g030320 | Sotub03g030320 | PNSB1 | Glycosyl transferase family 9 | 17.3.1.2.1 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT1 | 2 | 0.0725468664970446 | 436 | 465 | 447 | -36.7 | -24.9 | 0.678474114441417 | 0 |
| vsiRNA13572 | Sotub09g029310 | Sotub09g029310 | CCL | Light regulated protein-like protein | 30.11 signalling.light | 2 | 0.13853008202602202 | 292 | 316 | 304 | -33.5 | -23.1 | 0.68955223880597 | 0 |
| vsiRNA13580 | Sotub01g031270 | Sotub01g031270 | NTMC2T4 | Syt1 synaptotagmin Ca2+-dependent lipid-binding protein putati (IC) | 30.3 signalling.calcium | 2 | 0.13853008202602202 | 1312 | 1332 | 1323 | -32.5 | -21.8 | 0.670769230769231 | 3 |
| vsiRNA13593 | Sotub05g016370 | Sotub05g016370 | Sotub05g016370.1.1 | Drought-induced protein 1 | 20.2.3 stress.abiotic.drought/salt | 29.6 protein.folding | 1 | 0.0471979381277581 | 117 | 136 | 127 | -29.6 | -20.6 | 0.695945945945946 | 2 |
| vsiRNA13599 | Sotub04g022130 | Sotub04g022130 | PNSL4 | Peptidyl-prolyl cis-trans isomerase | 29.6 protein.folding | 2 | 0.0209831428393452 | 236 | 259 | 249 | -36 | -25.2 | 0.7 | 0 |
| vsiRNA13607 | Sotub03g028480 | Sotub03g028480 | ABCB27 | Lipid a export ATP-binding/permease protein msba | 34.16 transport.ABC transporters and multidrug resistance systems | 1 | 0.0026885942021822604 | 1758 | 1775 | 1766 | -30.8 | -23.9 | 0.7759740259740261 | 3 |
| vsiRNA13607 | Sotub11g025940 | Sotub11g025940 | ABCF1 | ATP-binding cassette | 34.16 transport.ABC transporters and multidrug resistance systems | 2 | 0.255107064342019 | 1625 | 1644 | 1635 | -30.8 | -21.5 | 0.698051948051948 | 2 |
| vsiRNA13607 | Sotub11g026570 | Sotub11g026570 | Sotub11g026570.1.1 | Aquaporin | 34.19.1 transport.major intrinsic proteins.PIP | 2 | 0.31731076381306 | 774 | 793 | 784 | -30.8 | -20.8 | 0.6753246753246751 | 2 |
| vsiRNA13613 | Sotub04g011340 | Sotub04g011340 | Sotub04g011340.1.1 | Unknown Protein | 35.1.41 not assigned.no ontology.hydroxyproline rich proteins | 2 | 0.11125331210860401 | 214 | 237 | 226 | -37.4 | -26 | 0.6951871657754011 | 1 |
| vsiRNA13628 | Sotub11g023900 | Sotub11g023900 | ALB3 | Inner membrane protein oxaA | 29.3.3 protein.targeting.chloroplast | 31.2.5 cell.division.plastid | 2 | 0.5855011080197481 | 1258 | 1281 | 1272 | -34.6 | -23.1 | 0.6676300578034681 | 1 |
| vsiRNA13637 | Sotub05g025970 | Sotub05g025970 | LPD1 | Dihydrolipoyl dehydrogenase | 8.1.1.3 TCA / organic transformation.TCA.pyruvate DH.E3 | 21.2.2 redox.ascorbate and glutathione.glutathione | 2 | 0.024546242206054298 | 1120 | 1142 | 1133 | -36.3 | -24.3 | 0.669421487603306 | 2 |
| vsiRNA13650 | Sotub12g021630 | Sotub12g021630 | PIFI | Chloroplast post-illumination chlorophyll fluorescence increase protein | 1.1.40 PS.lightreaction.cyclic electron flow-chlororespiration | 2 | 0.312419972200079 | 376 | 394 | 386 | -33.9 | -23.3 | 0.687315634218289 | 3 |
| vsiRNA13651 | Sotub01g034840 | Sotub01g034840 | GME | NAD-dependent epimerase/dehydratase family protein-like protein | 10.1.5 cell wall.precursor synthesis.UXS | 21.2.1.1 redox.ascorbate and glutathione.ascorbate.GME | 2 | 0.474475008539592 | 519 | 540 | 531 | -36.2 | -24.5 | 0.676795580110497 | 1 |
| vsiRNA13653 | Sotub07g025380 | Sotub07g025380 | ALS | Acetolactate synthase | 13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase | 18.2 Co-factor and vitamine metabolism.thiamine | 2 | 0.0488887682682202 | 1527 | 1547 | 1539 | -38.2 | -25.9 | 0.678010471204188 | 3 |
| vsiRNA13654 | Sotub03g034280 | Sotub03g034280 | Sotub03g034280.1.1 | NUMOD3 motif family protein expressed | 35.2 not assigned.unknown | 2 | 0.123100895336853 | 1359 | 1382 | 1371 | -38.8 | -25.6 | 0.65979381443299 | 3 |
| vsiRNA13686 | Sotub05g016450 | Sotub05g016450 | FBX6 | F-box family protein (Fragment) | 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX | 0 | 0.0149020300744523 | 194 | 214 | 205 | -32.6 | -24.2 | 0.7423312883435581 | 1 |
| vsiRNA13686 | Sotub12g006910 | Sotub12g006910 | Sotub12g006910.1.1 | 14-3-3-like protein GF14 Epsilon | 30.7 signalling.14-3-3 proteins | 2 | 0.24822839117326 | 285 | 313 | 304 | -32.6 | -22.3 | 0.684049079754601 | 0 |
| vsiRNA13687 | Sotub02g030460 | Sotub02g030460 | BCAT3 | Branched-chain-amino-acid aminotransferase | 13.1.4.1.4 amino acid metabolism.synthesis.branched chain group.common.branched-chain-amino-acid aminotransferase | 16.5.1.1.1.1 secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT) | 18.4.1 Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase | 1 | 0.00877218323284468 | 863 | 883 | 874 | -34.3 | -25.2 | 0.73469387755102 | 2 |
| vsiRNA13735 | Sotub05g006510 | Sotub05g006510 | HSP90-1 | Chaperone protein htpG | 20.2.1 stress.abiotic.heat | 30.2.3 signalling.receptor kinases.leucine rich repeat III | 3 | 0.345928119495974 | 1366 | 1392 | 1378 | -31.3 | -20.8 | 0.664536741214057 | 1 |
| vsiRNA13738 | Sotub10g013740 | Sotub10g013740 | AKT1 | Inward rectifier potassium channel-like protein (Fragment) | 34.15 transport.potassium | 2 | 0.157666446538536 | 1796 | 1816 | 1807 | -35.3 | -24.2 | 0.685552407932011 | 3 |
| vsiRNA13766 | Sotub01g048710 | Sotub01g048710 | CSP1 | Cold shock protein-1 | 20.2.2 stress.abiotic.cold | 27.3.75 RNA.regulation of transcription.GRP | 3 | 0.0032476236801934903 | 278 | 305 | 288 | -36.8 | -28 | 0.760869565217391 | 0 |
| vsiRNA13790 | Sotub01g005440 | Sotub01g005440 | XTH27 | Xyloglucan endotransglucosylase/hydrolase 13 | 10.7 cell wall.modification | 2 | 0.060968327044391396 | 594 | 618 | 608 | -38.8 | -28 | 0.721649484536083 | 0 |
| vsiRNA13806 | Sotub02g036100 | Sotub02g036100 | BCA1 | Carbonic anhydrase | 8.3 TCA / organic transformation.carbonic anhydrases | 16.99 secondary metabolism.unspecified | 3 | 0.0021151565282011603 | 694 | 718 | 709 | -39.2 | -29.7 | 0.75765306122449 | 0 |
| vsiRNA13820 | Sotub06g032770 | Sotub06g032770 | PDX11 | Pyridoxal biosynthesis lyase pdxS | 17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated | 18 Co-factor and vitamine metabolism | 3 | 0.0330547363669049 | 452 | 474 | 462 | -41.7 | -28.4 | 0.6810551558753 | 1 |
| vsiRNA13826 | Sotub01g047810 | Sotub01g047810 | FBA1 | Fructose-bisphosphate aldolase | 1.3.6 PS.calvin cycle.aldolase | 11.1.30 lipid metabolism.FA synthesis and FA elongation.pyruvate kinase | 3 | 0.0167965119134043 | 636 | 657 | 647 | -32.4 | -22.52 | 0.6950617283950621 | 3 |
| vsiRNA13840 | PGSC0003DMC400044193 | PGSC0003DMG400025487 | ICL | Isocitrate lyase | 6.9 gluconeogenesis / glyoxylate cycle.isocitrate lyase | 3 | 0.008433820621842841 | 1007 | 1027 | 1018 | -36.4 | -28.3 | 0.777472527472527 | 2 |
| vsiRNA13844 | Sotub02g006950 | Sotub02g006950 | DPE2 | 4-alpha-glucanotransferase | 2.2.2.4 major CHO metabolism.degradation.starch.D enzyme | 2 | 0.15523993763052402 | 316 | 339 | 330 | -32.4 | -21.5 | 0.66358024691358 | 2 |
| vsiRNA13854 | Sotub05g029410 | Sotub05g029410 | EMB1691 | Methyltransferase-like protein KIAA1627-like protein | 27.3.67 RNA.regulation of transcription.putative transcription regulator | 2 | 0.0113036307861911 | 3168 | 3187 | 3179 | -32.1 | -23.5 | 0.73208722741433 | 3 |
| vsiRNA13854 | PGSC0003DMC400056581 | PGSC0003DMG400034477 | PGSC0003DMG400034477 | Gene of unknown function | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING | 3 | 0.0241700517553955 | 208 | 230 | 221 | -32.1 | -21.8 | 0.679127725856698 | 3 |
| vsiRNA13866 | Sotub01g042420 | Sotub01g042420 | UGT85A1 | UDP-glucuronosyltransferase | 26.2 misc.UDP glucosyl and glucoronyl transferases | 2 | 0.00959297188570685 | 1242 | 1261 | 1252 | -33.1 | -25.6 | 0.7734138972809671 | 2 |
| vsiRNA13866 | Sotub03g026200 | Sotub03g026200 | AFC1 | Serine/threonine kinase | 29.4 protein.postranslational modification | 2 | 0.128247396484922 | 774 | 793 | 784 | -33.1 | -22.9 | 0.691842900302115 | 3 |
