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Metadata | Values (examples) | ||||||||
Asset Title | ALD Kinetic Data | ||||||||
Uploader | Dawie van Niekerk | ||||||||
Uploader SEEK ID | |||||||||
Project | |||||||||
ASSAY | |||||||||
Assay SEEK ID | 0 | ||||||||
Assay Title | ALD | ||||||||
Assay_type | enzymaticAssay | ||||||||
Technology_type | initial rate experiment | ||||||||
Description | Kinetic characterisation of ALD. Experimental data for enzyme reaction rates. | ||||||||
Experimentalist | Gerald Penkler | ||||||||
Date | |||||||||
SOP | |||||||||
Publication (optional) | |||||||||
Experimental_conditions | |||||||||
Item | temperature | pH | Buffer | Buffer | Buffer | Buffer | |||
Compound (if concentration) | HEPES | MgCl | KCl | NaCl | |||||
Unit | °C | mM | mM | mM | mM | ||||
Start_value (optional) | 37 | 7.17 | 20 | 20 | 10 | 20 | |||
End_value (optional) | |||||||||
Comments | |||||||||
Culture growth | Batch | ||||||||
FACTORS_STUDIED | |||||||||
Item | concentration | concentration | concentration | ||||||
Compound (if concentration) | FBP | GAP | DHAP | ||||||
Unit | mM | mM | mM | ||||||
Start_value (optional) | 0.00625 | 0 | 0 | ||||||
End_value (optional) | 0.75 | 0 | 0 | ||||||
SD (optional) | |||||||||
Comments | |||||||||
ENZYME IDENTITY | |||||||||
Enzyme Name (IUBMB) | fructose-bisphosphate aldolase | ||||||||
EC Number | 4.1.2.13 | ||||||||
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Date | FBP | GAP | DHAP | v | ControlRate | v/ControlRate | mean (v/V) | SEM (v/V) | Vf_model | Vr_model | v_unnormalised |
yyymmdd | (mM) | (mM) | (mM) | (U/mg) | (U/mg) | 1 | 1 | (M/min) | (M/min) | (fmol/28fL/min) | |
20080808 | 1.0E-11 | 0 | 0 | 0 | 0.933421 | 0 | 0 | 0 | 0.0569593 | 0 | |
20080808 | 0.625 | 0 | 0 | 0.759670391897594 | 0.933421 | 0.813856118404872 | 0.8075884991691338 | 0.006267619235738208 | 0.0569593 | 1.2979868945416415 | |
20080808 | 0.625 | 0 | 0 | 0.74796973706831 | 0.933421 | 0.8013208799333956 | 0.0569593 | 1.2779949390989274 | |||
20080808 | 0.375 | 0 | 0 | 0.822028681106332 | 0.933421 | 0.8806622961196845 | 0.9087303628729722 | 0.028068066753287654 | 0.0569593 | 1.4045334218543584 | |
20080808 | 0.375 | 0 | 0 | 0.874427326980173 | 0.933421 | 0.9367984296262598 | 0.0569593 | 1.4940627181931085 | |||
20080808 | 0.25 | 0 | 0 | 0.800068072369597 | 0.933421 | 0.8571352823319778 | 0.8578469792688418 | 7.116969368640146E-4 | 0.0569593 | 1.3670111192340908 | |
20080808 | 0.25 | 0 | 0 | 0.801396698102606 | 0.933421 | 0.8585586762057058 | 0.0569593 | 1.3692812337569025 | |||
20080808 | 0.2 | 0 | 0 | 0.796454446584033 | 0.933421 | 0.8532639040519048 | 0.8461508023028763 | 0.007113101749028516 | 0.0569593 | 1.3608368113217824 | |
20080808 | 0.2 | 0 | 0 | 0.783175409488673 | 0.933421 | 0.8390377005538477 | 0.0569593 | 1.3381480027203898 | |||
20080808 | 0.15 | 0 | 0 | 0.732960041724814 | 0.933421 | 0.78524057389411 | 0.836510272166155 | 0.05126969827204503 | 0.0569593 | 1.2523490957769896 | |
20080808 | 0.15 | 0 | 0 | 0.828672467786395 | 0.933421 | 0.8877799704382 | 0.0569593 | 1.4158851187650556 | |||
20080808 | 0.1 | 0 | 0 | 0.648225482272148 | 0.933421 | 0.6944620726040533 | 0.6817421921102171 | 0.012719880493836155 | 0.0569593 | 1.1075700588981294 | |
20080808 | 0.1 | 0 | 0 | 0.624479475131274 | 0.933421 | 0.669022311616381 | 0.0569593 | 1.066997191513426 | |||
20080808 | 0.075 | 0 | 0 | 0.546519330648737 | 0.933421 | 0.5855014303821503 | 0.585021017333145 | 4.8041304900525716E-4 | 0.0569593 | 0.9337930454598484 | |
20080808 | 0.075 | 0 | 0 | 0.545622475391506 | 0.933421 | 0.5845406042841398 | 0.0569593 | 0.9322606619648449 | |||
20080808 | 0.05 | 0 | 0 | 0.422718425787535 | 0.933421 | 0.4528700616201425 | 0.461409004717936 | 0.008538943097793489 | 0.0569593 | 0.7222645276235251 | |
20080808 | 0.05 | 0 | 0 | 0.438659283398106 | 0.933421 | 0.46994794781572946 | 0.0569593 | 0.7495013720325734 | |||
20080808 | 0.0375 | 0 | 0 | 0.422153649798393 | 0.933421 | 0.4522650013213684 | 0.3836777338810017 | 0.06858726744036693 | 0.0569593 | 0.7212995409133981 | |
20080808 | 0.0375 | 0 | 0 | 0.294112058275484 | 0.933421 | 0.31509046644063504 | 0.0569593 | 0.5025253073436977 | |||
20080808 | 0.0125 | 0 | 0 | 0.182676628653838 | 0.933421 | 0.19570657683278822 | 0.19570657683278822 | 0 | 0.0569593 | 0.31212466941017136 | |
20080808 | 0.00625 | 0 | 0 | 0.0722647911944396 | 0.933421 | 0.07741929011072132 | 0.07741929011072132 | 0 | 0.0569593 | 0.12347295999370103 | |
20081205 | 0.75 | 0 | 0 | 0.890652718411289 | 0.984147 | 0.9049996783115623 | 0.8208331449246312 | 0.04389128251271763 | 0.0569593 | 1.4433481489518494 | |
20081205 | 0.75 | 0 | 0 | 0.745152020730246 | 0.984147 | 0.7571552021499288 | 0.0569593 | 1.2075568485629162 | |||
20081205 | 0.75 | 0 | 0 | 0.787656692092888 | 0.984147 | 0.8003445543124026 | 0.0569593 | 1.2764378360285003 | |||
20081205 | 0.449999999999999 | 0 | 0 | 0.780440681329217 | 0.984147 | 0.7930123054068314 | 0.8891778308976352 | 0.05355133000066363 | 0.0569593 | 1.2647439226060613 | |
20081205 | 0.449999999999999 | 0 | 0 | 0.962588414884896 | 0.984147 | 0.9780941413070364 | 0.0569593 | 1.5599236134425964 | |||
20081205 | 0.449999999999999 | 0 | 0 | 0.882215988019132 | 0.984147 | 0.8964270459790378 | 0.0569593 | 1.4296759971209465 | |||
20081205 | 0.3 | 0 | 0 | 0.7534822772225 | 0.984147 | 0.7656196454620093 | 0.7983903995480768 | 0.02290967209065428 | 0.0569593 | 1.2210564540093984 | |
20081205 | 0.3 | 0 | 0 | 0.829152452918172 | 0.984147 | 0.8425087440373968 | 0.0569593 | 1.3436838325189804 | |||
20081205 | 0.3 | 0 | 0 | 0.774565819491451 | 0.984147 | 0.7870428091448238 | 0.0569593 | 1.2552234094098373 | |||
20081205 | 0.24 | 0 | 0 | 0.720798713013492 | 0.984147 | 0.732409602440989 | 0.7929195057310879 | 0.04745453769599176 | 0.0569593 | 1.1680910715128765 | |
20081205 | 0.24 | 0 | 0 | 0.87244312015818 | 0.984147 | 0.8864967531864447 | 0.0569593 | 1.4138385663856343 | |||
20081205 | 0.24 | 0 | 0 | 0.747806225248527 | 0.984147 | 0.7598521615658301 | 0.0569593 | 1.2118581223357445 | |||
20081205 | 0.18 | 0 | 0 | 0.685429504837235 | 0.984147 | 0.696470654116951 | 0.6328984149586024 | 0.03189045086618782 | 0.0569593 | 1.110773466013222 | |
20081205 | 0.18 | 0 | 0 | 0.587189290492331 | 0.984147 | 0.596647950450828 | 0.0569593 | 0.9515701889151875 | |||
20081205 | 0.18 | 0 | 0 | 0.595976433829225 | 0.984147 | 0.6055766403080283 | 0.0569593 | 0.965810202792318 | |||
20081205 | 0.18 | 0 | 0 | 0.750444025446334 | 0.984147 | 0.7625324524144604 | 0.8579832620964978 | 0.0479431155071687 | 0.0569593 | 1.2161328120707071 | |
20081205 | 0.18 | 0 | 0 | 0.899129847371033 | 0.984147 | 0.9136133599665832 | 0.0569593 | 1.4570857687216487 | |||
20081205 | 0.18 | 0 | 0 | 0.883571087510079 | 0.984147 | 0.8978039739084496 | 0.0569593 | 1.4318720049492195 | |||
20081205 | 0.12 | 0 | 0 | 0.552286042216287 | 0.984147 | 0.561182467879582 | 0.5515850729391839 | 0.027355004313905664 | 0.0569593 | 0.8950076951954173 | |
20081205 | 0.12 | 0 | 0 | 0.511248293396581 | 0.984147 | 0.5194836679851496 | 0.0569593 | 0.8285039305162628 | |||
20081205 | 0.12 | 0 | 0 | 0.64001414295053 | 0.984147 | 0.6503237249623584 | 0.0569593 | 1.0371755561229568 | |||
20081205 | 0.12 | 0 | 0 | 0.529314837423064 | 0.984147 | 0.5378412345138114 | 0.0569593 | 0.8577816864131911 | |||
20081205 | 0.12 | 0 | 0 | 0.481340657902933 | 0.984147 | 0.4890942693550181 | 0.0569593 | 0.7800370820612519 | |||
20081205 | 0.09 | 0 | 0 | 0.497345529882467 | 0.984147 | 0.5053569536689814 | 0.49725968500016904 | 0.025403244151663954 | 0.0569593 | 0.805973793271293 | |
20081205 | 0.09 | 0 | 0 | 0.558325354011067 | 0.984147 | 0.5673190631186875 | 0.0569593 | 0.9047947079330952 | |||
20081205 | 0.09 | 0 | 0 | 0.525440119054747 | 0.984147 | 0.5339041007641612 | 0.0569593 | 0.8515025077063704 | |||
20081205 | 0.09 | 0 | 0 | 0.432608702758309 | 0.984147 | 0.43957732204468336 | 0.0569593 | 0.7010644636671124 | |||
20081205 | 0.09 | 0 | 0 | 0.433163430362717 | 0.984147 | 0.4401409854043319 | 0.0569593 | 0.7019634280383469 | |||
20081205 | 0.06 | 0 | 0 | 0.465269890062376 | 0.984147 | 0.4727646277053896 | 0.4891080541606246 | 0.014689653137886673 | 0.0569593 | 0.7539935832480686 | |
20081205 | 0.06 | 0 | 0 | 0.502617571799661 | 0.984147 | 0.5107139195665495 | 0.0569593 | 0.8145174060454751 | |||
20081205 | 0.06 | 0 | 0 | 0.493936880929015 | 0.984147 | 0.5018933969508773 | 0.0569593 | 0.800449903818435 | |||
20081205 | 0.06 | 0 | 0 | 0.512179000550261 | 0.984147 | 0.52042936731023 | 0.0569593 | 0.8300121889201404 | |||
20081205 | 0.06 | 0 | 0 | 0.432767777548768 | 0.984147 | 0.4397389592700765 | 0.0569593 | 0.7013222524770579 | |||
20081205 | 0.045 | 0 | 0 | 0.307792287712527 | 0.984147 | 0.31275031851189605 | 0.347830463020252 | 0.021926758884930328 | 0.0569593 | 0.4987930980820099 | |
20081205 | 0.045 | 0 | 0 | 0.38200706434341 | 0.984147 | 0.38816057392179215 | 0.0569593 | 0.619061928189139 | |||
20081205 | 0.045 | 0 | 0 | 0.337149568014039 | 0.984147 | 0.3425804966270679 | 0.0569593 | 0.5463680678828442 | |||
20081205 | 0.015 | 0 | 0 | 0.113915849107701 | 0.984147 | 0.11575084728978598 | 0.10579734037895064 | 0.013849507312530979 | 0.0569593 | 0.18460644260892697 | |
20081205 | 0.015 | 0 | 0 | 0.0604177854056627 | 0.984147 | 0.06139101720135579 | 0.0569593 | 0.09791010225016117 | |||
20081205 | 0.015 | 0 | 0 | 0.118205993103321 | 0.984147 | 0.1201100984947584 | 0.0569593 | 0.19155883972938978 | |||
20081205 | 0.015 | 0 | 0 | 0.088390546184268 | 0.984147 | 0.08981437344651562 | 0.0569593 | 0.14324138756065927 | |||
20081205 | 0.015 | 0 | 0 | 0.139670501908663 | 0.984147 | 0.14192036546233744 | 0.0569593 | 0.2263431708294097 | |||