Selected Cell
Cell:
Value:
metadata
BF HL
PC HL
switching method
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Decay models published in Deneke et al. were used to fit the decay data of mRNA and calculate half-lives (HL) | |||||||||
BF =bloodform | |||||||||
PC =procyclic | |||||||||
Eq9 = fast-to-slow decay | |||||||||
Eq10 = slow-to-fast decay | |||||||||
lambda = rate of transition between states | |||||||||
mu = rate of degradation | |||||||||
nu = rate of initial degradation | |||||||||
U = transcript lifetime | |||||||||
Error = least squares | |||||||||
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Gene | Description | Class | Method | lambda | mu | nu | U | Half-life | Error |
Tb11.02.5105 | POMP15 | Mitochondrial membrane | Eq9 | 5.26617E-4 | 0.123244291 | 0.005673454 | 8.829387307 | 6.369142532 | 0.115963143 |
Tb11.02.5360 | hypothetical protein, conserved | 0 | Eq9 | 0.004019246 | 0.175774495 | 0.007842417 | 8.412423062 | 7.552442551 | 0.060071011 |
Tb11.02.5370 | hypothetical protein, conserved | 0 | Eq9 | 0.003315379 | 0.131873533 | 0.006356238 | 11.25532064 | 10.13274193 | 0.146500316 |
Tb11.02.5380 | RRP44 | RNA degradation | Eq9 | 4.6989E-4 | 0.089878778 | 0.003310893 | 12.63906385 | 9.329805374 | 0.057657916 |
Tb11.02.5390 | MRB complex protein | Mitochondrial RNA | Exponential | 0.078149193 | 0 | 0 | 12.79603743 | 8.869543076 | 0.080184984 |
Tb11.02.5400 | cystathionine beta-synthase, putative | Amino acid metabolism | Eq9 | 0.002056443 | 0.184243038 | 0.007079225 | 6.92696406 | 5.499887466 | 0.061057943 |
Tb11.02.5430 | hypothetical protein, conserved | 0 | Eq9 | 1.53965E-4 | 0.079748147 | 5.57738E-4 | 15.97019446 | 12.69282341 | 0.128357989 |
Tb11.02.5440 | hypothetical protein, conserved | 0 | Eq9 | 0.005648236 | 0.182520238 | 0.013482816 | 7.540695004 | 6.312589645 | 0.09790524 |
Tb927.1.1000 | developmentally regulated phosphoprotein (dr6) | Mitochondrial pathway | Eq9 | 6.13091E-4 | 0.135448817 | 0.005335703 | 8.194089442 | 5.972490311 | 0.0385342 |
Tb927.1.1010 | hypothetical protein, conserved | 0 | Eq9 | 0.008093727 | 0.132915333 | 0.010154909 | 12.7440468 | 13.14595222 | 0.102422156 |
Tb927.1.1020 | hypothetical protein, conserved | 0 | Exponential | 0.050907647 | 0 | 0 | 19.64341414 | 13.61577034 | 0.100589356 |
Tb927.1.1030 | leucine-rich repeat protein (LRRP) | LRRP | Eq9 | 0.001398187 | 0.103768698 | 0.010281853 | 10.80174542 | 7.90520668 | 0.041324878 |
Tb927.1.1040 | hypothetical protein, conserved | 0 | Eq9 | 0.045878661 | 0.479297331 | 0.036063073 | 4.326508423 | 6.048574448 | 0.033703879 |
Tb927.1.1050 | hypothetical protein, conserved | 0 | Eq9 | 0.004021964 | 0.103007674 | 0.011008577 | 12.75673017 | 10.27554512 | 0.036915422 |
Tb927.1.1060 | hypothetical protein, conserved, PCNA superfamily with putative DNA-binding site, low match to yeast Rad17 | 0 | Eq9 | 0.014350793 | 0.172571595 | 0.022857755 | 8.708589633 | 7.742605209 | 0.074486134 |
Tb927.1.1080 | TFIIH basal transcription factor subunit (TSP1) | RNA synthesis | Eq9 | 0.00348519 | 0.121617184 | 0.015618672 | 9.77713286 | 7.384328842 | 0.079758087 |
Tb927.1.1100 | hypothetical protein, conserved, myosin-like | 0 | Eq9 | 0.002998155 | 0.099783266 | 0.01199317 | 12.16161951 | 9.298315048 | 0.033233016 |
Tb927.1.1120 | hypothetical protein, conserved | 0 | Exponential | 0.07729216 | 0 | 0 | 12.93792283 | 8.967885971 | 0.10361782 |
Tb927.1.1130 | glycerol-3-phosphate dehydrogenase (FAD-dependent), putative | Glucose & glycerol | Eq9 | 0.066292406 | 40.67786428 | 0.017755681 | 0.116178341 | 25.69708824 | 0.090062796 |
Tb927.1.1140 | hypothetical protein, conserved | 0 | Eq9 | 0.018165592 | 7.11016547 | 0.021086628 | 0.261137489 | 0.366125107 | 0.068528049 |
Tb927.1.1150 | zeta tubulin | Cytoskeleton | Eq9 | 0.018247569 | 74.08433222 | 0.021352718 | 0.025027176 | 0.035295486 | 0.122689996 |
Tb927.1.1160 | PPR3 | Mitochondrial translation | Eq9 | 0.030727573 | 8.62174173 | 0.027172366 | 0.246269473 | 2.308835983 | 0.057672543 |
Tb927.1.1200 | Mitchondrial SSU ribosomal protein | Mitochondrial translation | Eq9 | 0.005248924 | 0.131733513 | 0.021641825 | 9.070769403 | 6.85997963 | 0.051809109 |
Tb927.1.1220 | hypothetical protein, conserved | 0 | Eq9 | 0.020956007 | 0.159371396 | 0.024950776 | 10.20307501 | 9.608392715 | 0.055913645 |
Tb927.1.1230 | chaperone protein DNAj, putative | Chaperone | Eq9 | 0.022851205 | 0.370012819 | 0.021295529 | 5.276766598 | 7.020196915 | 0.125560179 |
Tb927.1.1240 | CTP synthase | Nucleotides | Eq10 | 0.074160075 | 7.186E-8 | 0.071569853 | 2.843146112 | 41.44901991 | 0.086234342 |
Tb927.1.1270 | homocysteine S-methyltransferase, putative | Amino acid metabolism | Exponential | 0.046749379 | 0 | 0 | 21.39065858 | 14.8268795 | 0.100384232 |
Tb927.1.1300 | hypothetical protein, conserved | 0 | Eq9 | 0.067699377 | 0.386298771 | 0.089811607 | 3.862996327 | 3.325872421 | 0.039770465 |
Tb927.1.1310 | hypothetical protein, conserved | 0 | Exponential | 0.103812587 | 0 | 0 | 9.632743324 | 6.676912308 | 0.051731812 |
Tb927.1.1330 | Mitochondrial Editosome-like Complex TUTase (MEAT1) | Mitochondrial RNA | Eq9 | 1.21037E-4 | 0.147141817 | 0.003073245 | 7.058018508 | 4.977254868 | 0.039408173 |
Tb927.1.1340 | FG-GAP repeat protein, putative,intergrin alpha chain protein, putative | Cytoskeleton | Eq9 | 0.003020637 | 0.136442429 | 0.015409099 | 8.575958245 | 6.422109604 | 0.02581624 |
Tb927.1.1350 | kinesin heavy chain, putative | Cytoskeleton | Eq9 | 0.001601277 | 0.10930983 | 0.007781759 | 10.87152782 | 8.226747513 | 0.060095355 |
Tb927.1.1370 | rRNA biogenesis protein, putative | rRNA tRNA processing | Eq10 | 0.432916136 | 1.4E-11 | 0.082149258 | 19.22100507 | 12.34148979 | 0.053209773 |
Tb927.1.1380 | serine/threonine protein phosphatase 2A regulatory subunit, putative | Protein kinase | Eq10 | 0.440408306 | 8.0E-12 | 0.066106057 | 22.50556739 | 13.92418861 | 0.088813592 |
Tb927.1.1390 | hypothetical protein, conserved | 0 | Exponential | 0.063883946 | 0 | 0 | 15.65338488 | 10.85009575 | 0.133786204 |
Tb927.1.1400 | hypothetical protein, conserved | 0 | Exponential | 0.074193381 | 0 | 0 | 13.47829123 | 9.342432022 | 0.127488266 |
Tb927.1.1420 | hypothetical protein, conserved | 0 | Exponential | 0.05125436 | 0 | 0 | 19.51053518 | 13.52366447 | 0.093674969 |
Tb927.1.1500 | hypothetical protein, conserved | 0 | Eq10 | 0.063314134 | 7.149E-9 | 0.062181786 | 1.700025143 | 48.4058404 | 0.161773598 |
Tb927.1.1530 | protein kinase, putative | Protein kinase | Exponential | 0.071032879 | 0 | 0 | 14.07798778 | 9.758119583 | 0.045907288 |
Tb927.1.1540 | hypothetical protein, conserved | 0 | Eq10 | 0.75477809 | 0 | 0.106241301 | 13.77965783 | 8.462915421 | 0.080946742 |
Tb927.1.1550 | tubulin-tyrosine ligase, putative | Cytoskeleton | Eq10 | 0.416412984 | 3.04E-10 | 0.085950159 | 18.76211667 | 12.26218224 | 0.083834285 |
Tb927.1.1560 | vesicular-fusion protein nsf, putative,N-ethylmaleimide sensitive factor (NsF) | Vesicular transport | Eq9 | 7.86479E-4 | 0.088326524 | 0.006533569 | 12.57252025 | 9.160757065 | 0.055012918 |
Tb927.1.1600 | hypothetical protein, conserved | 0 | Eq9 | 0.002070686 | 0.085920747 | 0.010768685 | 13.55004351 | 10.11439323 | 0.035272665 |
Tb927.1.1610 | hypothetical protein, conserved | 0 | Eq9 | 0.024788576 | 0.27276764 | 0.039989755 | 5.443923146 | 4.774637222 | 0.059495867 |
Tb927.1.1620 | ATP-dependent DEAD/H RNA helicase, putative, no clear yeast homologue | RNA helicase | Eq9 | 3.44084E-5 | 0.06453995 | 6.18727E-4 | 16.3472254 | 11.61629677 | 0.071618049 |
Tb927.1.1630 | hypothetical protein, conserved | 0 | Eq9 | 2.95578E-4 | 0.101698146 | 0.00317111 | 10.71840218 | 7.740182877 | 0.051840568 |
Tb927.1.1640 | hypothetical protein, conserved | 0 | Eq9 | 0.020193964 | 0.64508993 | 0.024780623 | 2.728022575 | 3.095426559 | 0.056763259 |
Tb927.1.1660 | hypothetical protein, conserved | 0 | Eq9 | 0.01185005 | 0.168189195 | 0.019667722 | 8.900906962 | 7.922239304 | 0.065213864 |
Tb927.1.1670 | hypothetical protein, conserved | 0 | Eq10 | 0.176693869 | 2.62515E-7 | 0.170309232 | 1.234832528 | 17.40000725 | 0.191131968 |
Tb927.1.1680 | hypothetical protein, conserved | 0 | Eq9 | 7.53716E-4 | 0.134280314 | 0.006239122 | 8.300165723 | 6.06253624 | 0.05533899 |
Tb927.1.1690 | RNA editing endoribonuclease (KREN1) | Mitochondrial RNA | Eq9 | 0.004884406 | 0.118749913 | 0.011485579 | 11.5280631 | 9.578485489 | 0.103353432 |
Tb927.1.1700 | hypothetical protein, conserved | 0 | Exponential | 0.027480967 | 0 | 0 | 36.38882088 | 25.22280693 | 0.140861048 |
Tb927.1.1710 | hypothetical protein, conserved | 0 | Eq10 | 0.092148727 | 0 | 0.089925279 | 1.577558785 | 33.29527617 | 0.224110813 |
Tb927.1.1720 | hypothetical protein, conserved | 0 | Eq9 | 0.017215084 | 6.760676151 | 0.023408721 | 0.256040296 | 0.295248032 | 0.083569195 |
Tb927.1.1730 | hypothetical protein, conserved | 0 | Eq9 | 2.45628E-4 | 0.065998483 | 0.002301604 | 16.70669772 | 12.13599205 | 0.083698669 |
Tb927.1.1750 | hypothetical protein, conserved | 0 | Exponential | 0.029387449 | 0 | 0 | 34.0281318 | 23.58651161 | 0.153552483 |
Tb927.1.1790 | hypothetical protein | 0 | Exponential | 0.103257544 | 0 | 0 | 9.684522404 | 6.712808609 | 0.101734364 |
Tb927.1.1820 | hypothetical protein, conserved | 0 | Exponential | 0.0885198 | 0 | 0 | 11.29690756 | 7.83041954 | 0.054418168 |
Tb927.1.1840 | hypothetical protein, conserved | 0 | Eq9 | 0.001176622 | 0.105590486 | 0.006836839 | 10.97810321 | 8.190069199 | 0.064184917 |
Tb927.1.1850 | hypothetical protein, conserved | 0 | Exponential | 0.065693405 | 0 | 0 | 15.22222816 | 10.55125237 | 0.093727241 |
Tb927.1.1880 | hypothetical protein, conserved | 0 | Eq9 | 0.020389391 | 0.214891099 | 0.026613352 | 7.506503801 | 7.130861282 | 0.072812112 |
Tb927.1.1890 | hypothetical protein, conserved | 0 | Eq9 | 0.078443034 | 0.567368102 | 0.018370358 | 8.160415644 | 27.84878731 | 0.102283256 |
Tb927.1.1910 | hypothetical protein, conserved | 0 | Eq9 | 0.006637384 | 0.133948659 | 0.014551054 | 10.35767519 | 8.679265976 | 0.054379885 |
Tb927.1.1920 | hypothetical protein, conserved | 0 | Eq9 | 0.03782731 | 0.245380824 | 0.026168739 | 8.635045841 | 11.22584343 | 0.060280186 |
Tb927.1.1930 | TbTOR4 = TOR-like 2 | Signalling | Exponential | 0.028522647 | 0 | 0 | 35.05985961 | 24.30163383 | 0.176184612 |
Tb927.1.1960 | chaperone protein DNAj, putative | Chaperone | Eq10 | 0.276878643 | 0 | 0.275336968 | 0.120772772 | 11.04594231 | 0.053556315 |
Tb927.1.1980 | hypothetical protein, conserved | 0 | Eq10 | 0.47631374 | 3.82272E-7 | 0.468255596 | 0.21375379 | 6.432981491 | 0.070387982 |
Tb927.1.1990 | hypothetical protein, conserved | 0 | Eq10 | 1.114019303 | 1.3E-11 | 0.261123919 | 6.368163924 | 4.297208786 | 0.017868104 |
Tb927.1.2110 | calpain-like cysteine peptidase, putative,cysteine peptidase, Clan CA, family C2, putative | Protease or peptidase | Eq9 | 0.008315175 | 0.255051397 | 0.008193447 | 7.650389098 | 11.14460945 | 0.136703513 |
Tb927.1.2120 | calpain, putative,cysteine peptidase, Clan CA, family C2, putative | Protease or peptidase | Eq9 | 3.12337E-4 | 0.079503496 | 0.002767525 | 13.94282347 | 10.15675545 | 0.059393322 |
Tb927.1.2190 | RAPTOR-like (TOR complexes) | Signalling | Exponential | 0.068126273 | 0 | 0 | 14.67862475 | 10.17445564 | 0.094238487 |
Tb927.1.2210 | hypothetical protein, conserved | 0 | Eq10 | 0.336158665 | 0.007476488 | 0.100494978 | 16.77157698 | 12.06332207 | 0.053697844 |
Tb927.1.2320 | hypothetical protein, conserved | 0 | Eq9 | 0.006641823 | 0.301538729 | 0.027920766 | 4.016739894 | 3.071603775 | 0.040051367 |
Tb927.1.2330 | beta tubulin | Cytoskeleton | Eq10 | 0.046707193 | 8.8113E-8 | 0.044895083 | 5.018209255 | 65.85524797 | 0.429684988 |
Tb927.1.2340 | alpha tubulin | Cytoskeleton | Eq10 | 0.040001409 | 2.3455E-7 | 0.037396542 | 9.883706959 | 77.26486444 | 0.374199398 |
Tb927.1.2430 | histone H3 | Chromatin | Eq10 | 0.05080012 | 1.0375E-7 | 0.048717453 | 4.87747673 | 60.5732131 | 0.270430141 |
Tb927.1.2570 | coatomer beta subunit (beta-coP) | Vesicular transport | Eq10 | 0.191657196 | 2.77493E-7 | 0.186799155 | 0.797119487 | 16.0106945 | 0.066919031 |
Tb927.1.2580 | EAP1 exosome complex PH subunit | RNA degradation | Eq10 | 0.18701422 | 1.06972E-6 | 0.172464459 | 2.53173328 | 16.56704903 | 0.139427862 |
Tb927.1.2600 | PUF9 | RNA binding | Eq10 | 0.039248544 | 3.1415E-8 | 0.037218152 | 7.980615047 | 78.55767488 | 0.338663053 |
Tb927.1.2640 | hypothetical protein, conserved | 0 | Exponential | 0.071445691 | 0 | 0 | 13.99664538 | 9.701738358 | 0.125855988 |
Tb927.1.2670 | flagellar protein PF16 | Cytoskeleton | Eq10 | 0.119045816 | 0 | 0.116213119 | 1.204159007 | 25.7710743 | 0.111515226 |
Tb927.1.2700 | hypothetical protein, conserved | 0 | Eq9 | 0.015170451 | 0.140391675 | 0.02513971 | 10.30743 | 8.799543381 | 0.067717886 |
Tb927.1.2710 | hypothetical protein, conserved | 0 | Eq9 | 0.003933743 | 0.131418985 | 0.017336397 | 9.064513206 | 6.852331161 | 0.065348819 |
Tb927.1.2730 | hypothetical protein, conserved | 0 | Exponential | 0.055179065 | 0 | 0 | 18.12281522 | 12.56176949 | 0.101015402 |
Tb927.1.2740 | lipase-like protein, putative | Lipids & fatty acids | Eq9 | 3.68176E-4 | 0.084343811 | 0.003085451 | 13.21331915 | 9.652566910000001 | 0.118343656 |
Tb927.1.2750 | hypothetical protein, conserved | 0 | Eq10 | 0.149942191 | 9.7423E-8 | 0.144805657 | 1.378988822 | 20.49807549 | 0.067396507 |
Tb927.1.2770 | hypothetical protein, conserved | 0 | Eq9 | 0.003452529 | 0.345579633 | 0.009672691 | 3.887709747 | 3.212175369 | 0.08719193 |
Tb927.1.2820 | pteridine transporter, putative | Folate | Eq9 | 4.48481E-4 | 0.066661854 | 0.003774602 | 16.67128441 | 12.15596199 | 0.079462099 |
Tb927.1.2970 | hypothetical protein, conserved | 0 | Eq9 | 0.00153286 | 0.159016668 | 0.017116445 | 6.786409374 | 4.871397018 | 0.060952926 |
Tb927.1.2980 | hypothetical protein, conserved | 0 | Eq9 | 0.01639451 | 0.299711991 | 0.021301126 | 5.598286046 | 5.729513168 | 0.043763578 |
Tb927.1.2985 | hypothetical protein, conserved | 0 | Eq9 | 0.062961419 | 0.190847516 | 0.040409702 | 10.07874993 | 10.21672249 | 0.069010835 |
Tb927.1.2990 | PPR2 | Mitochondrial translation | Eq9 | 0.012560093 | 0.176567958 | 0.013891607 | 10.06804508 | 11.04180336 | 0.085991034 |
Tb927.1.3000 | aminoacylase, putative,N-acyl-L-amino acid amidohydrolase, putative | Amino acid metabolism | Eq9 | 0.002774612 | 0.097715171 | 0.01274512 | 12.1176496 | 9.129476547 | 0.079702621 |
Tb927.1.3010 | mRNA processing protein, putative | Mitochondrial RNA | Eq9 | 0.021435246 | 0.135803074 | 0.013065521 | 16.79359323 | 24.3448925 | 0.164380739 |
Tb927.1.3030 | KREL2 | Mitochondrial RNA | Eq9 | 0.003730518 | 0.0792747 | 0.014299595 | 15.19040384 | 11.53012276 | 0.130472165 |
Tb927.1.3040 | hypothetical protein, conserved | 0 | Exponential | 0.044927441 | 0 | 0 | 22.25811148 | 15.42815208 | 0.093356917 |
Tb927.1.3050 | hypothetical protein, conserved | 0 | Eq10 | 0.232237485 | 0 | 0.094312126 | 19.08358865 | 16.43174171 | 0.09515385 |
Tb927.1.3070 | hypothetical protein, conserved, poly(Q), poly(H) | 0 | Exponential | 0.026069203 | 0 | 0 | 38.35943885 | 26.58873558 | 0.239344968 |
Tb927.1.3110 | soluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative | Vesicular transport | Eq10 | 0.329418309 | 0 | 0.153197773 | 11.61138909 | 11.08483315 | 0.059356263 |
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Tb927.5.3520 | queuine tRNA-ribosyltransferase, putative | rRNA tRNA processing | Eq9 | 0.021664583 | 2.295738623 | 0.019951327 | 0.900090146 | 2.576987743 | 0.06795163 | ||||||
Tb927.5.3530 | hypothetical protein, conserved | 0 | Exponential | 0.04184424 | 0 | 0 | 23.89815187 | 16.56492949 | 0.071558438 | ||||||
Tb927.5.3540 | hypothetical protein, conserved | 0 | Eq10 | 0.199189678 | 0 | 0.067933225 | 26.24081603 | 20.41064501 | 0.038251221 | ||||||
Tb927.5.3550 | hypothetical protein, conserved | 0 | Exponential | 0.051328209 | 0 | 0 | 19.48246433 | 13.50422144 | 0.055052819 | ||||||
Tb927.5.3560 | vesicle-associated membrane protein, putative (VAMP) | Vesicular transport | Exponential | 0.021527174 | 0 | 0 | 46.45291633 | 32.19870329 | 0.094674944 | ||||||
Tb927.5.3570 | hypothetical protein, conserved | 0 | Eq10 | 0.148571336 | 0.012552105 | 0.099881545 | 17.15084794 | 16.88303232 | 0.054189431 | ||||||
Tb927.5.3580 | phosphoglycerate mutase protein, putative | Glucose & glycerol | Exponential | 0.041744616 | 0 | 0 | 23.95518515 | 16.60446882 | 0.085577782 | ||||||
Tb927.5.3590 | hypothetical protein, conserved | 0 | Eq10 | 0.246963042 | 2.0E-12 | 0.039673875 | 38.14980896 | 23.81735086 | 0.098489191 | ||||||
Tb927.5.3600 | ATP-dependent DEAD/H RNA helicase, putative Prp5, splicing? | RNA processing | Eq9 | 6.71601E-4 | 0.067017323 | 0.00743999 | 16.1070537 | 11.56304598 | 0.061051687 | ||||||
Tb927.5.3610 | adaptor complex protein (AP) 3 delta subunit 1, putative | Vesicular transport | Exponential | 0.055572378 | 0 | 0 | 17.99455121 | 12.47286558 | 0.047377425 | ||||||
Tb927.5.3620 | kinetoplastid-specific dual specificity phosphatase, putative | Phosphatase | Eq10 | 0.052774645 | 2.40639E-7 | 0.050935794 | 3.986933351 | 58.23708773 | 0.091819758 | ||||||
Tb927.5.3630 | hypothetical protein, conserved | 0 | Eq10 | 0.247644176 | 2.0E-12 | 0.07574568 | 23.17878715 | 17.14641809 | 0.038497253 | ||||||
Tb927.5.3640 | Mitchondrial SSU ribosomal protein | Mitochondrial translation | Eq10 | 0.213008045 | 8.99502E-7 | 0.2128041 | 0.026584201 | 14.63927507 | 0.022353573 | ||||||
Tb927.5.3650 | hypothetical protein, conserved | 0 | Eq10 | 0.224520638 | 1.0E-12 | 0.049314461 | 33.20237747 | 22.02337503 | 0.116288241 | ||||||
Tb927.5.3670 | DNA repair protein XPF, putative | DNA synthesis, modification, repair | Exponential | 0.026836986 | 0 | 0 | 37.26200806 | 25.82804918 | 0.103644239 | ||||||
Tb927.5.3680 | hypothetical protein, conserved | 0 | Exponential | 0.030762291 | 0 | 0 | 32.50733221 | 22.53236532 | 0.150555601 | ||||||
Tb927.5.3690 | hypothetical protein, conserved | 0 | Exponential | 0.025058647 | 0 | 0 | 39.90638503 | 27.66099215 | 0.252047148 | ||||||
Tb927.5.3700 | hypothetical protein, conserved | 0 | Eq10 | 0.126018301 | 1.3142E-6 | 0.117795032 | 3.144610152 | 24.52438116 | 0.057649124 | ||||||
Tb927.5.3710 | Neutral sphingomyelinase | Lipids & fatty acids | Eq10 | 0.179685415 | 6.0E-12 | 0.114331242 | 13.30209965 | 18.6407876 | 0.044723549 | ||||||
Tb927.5.3750 | PPCT1 | RNA binding | Eq9 | 7.21216E-4 | 0.094389365 | 0.00764159 | 11.5063997 | 8.288376331 | 0.025386034 | ||||||
Tb927.5.3760 | SPO11 meiotic recombination protein | DNA synthesis, modification, repair | Exponential | 0.048711181 | 0 | 0 | 20.52916754 | 14.22973394 | 0.115406699 | ||||||
Tb927.5.3780 | hypothetical protein, conserved | 0 | Exponential | 0.049052872 | 0 | 0 | 20.38616621 | 14.1306138 | 0.050793704 | ||||||
Tb927.5.3800 | glutamine hydrolysing (not ammonia-dependent) carbomoyl phosphate synthase, putative | Amino acid metabolism | Exponential | 0.002993455 | 0 | 0 | 334.0621922 | 231.5542674 | 1.219137059 | ||||||
Tb927.5.3810 | orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, OMPDCase-OPRTase | Nucleotides | Eq10 | 0.040667561 | 1.69325E-7 | 0.038419138 | 8.238567268 | 75.86090326 | 0.335338984 | ||||||
Tb927.5.3820 | aspartate carbamoyltransferase, putative | Nucleotides | Eq10 | 0.056998758 | 2.2627E-8 | 0.056810785 | 0.34745746 | 53.63474607 | 0.170465916 | ||||||
Tb927.5.3830 | dihydroorotate dehydrogenase (fumarate), putative | Enzyme | Eq10 | 0.079244234 | 9.4921E-8 | 0.077535413 | 1.639026954 | 38.69743109 | 0.108841903 | ||||||
Tb927.5.3840 | hypothetical protein, conserved | 0 | Eq9 | 0.011244039 | 0.188602133 | 0.009969775 | 10.64725287 | 15.26877165 | 0.086848423 | ||||||
Tb927.5.3850 | XRNE | rRNA tRNA processing | Eq10 | 0.127620359 | 4.12476E-7 | 0.121434183 | 2.298782963 | 24.14382219 | 0.155934104 | ||||||
Tb927.5.3860 | tubulin tyrosine ligase, putative | Cytoskeleton | Eq10 | 0.357668845 | 1.0E-12 | 0.05159131 | 28.55020291 | 17.58129358 | 0.035952413 | ||||||
Tb927.5.3870 | Mitchondrial LSU ribosomal protein | Mitochondrial translation | Eq10 | 0.313032295 | 1.0E-12 | 0.076486432 | 21.94965023 | 14.98947859 | 0.055232166 | ||||||
Tb927.5.3880 | hypothetical protein, conserved | 0 | Exponential | 0.057108755 | 0 | 0 | 17.51045015 | 12.13732481 | 0.04816073 | ||||||
Tb927.5.3890 | hypothetical protein, conserved | 0 | Exponential | 0.066881896 | 0 | 0 | 14.95172931 | 10.36374807 | 0.045919386 | ||||||
Tb927.5.3900 | hypothetical protein, conserved | 0 | Eq10 | 0.074186747 | 1.75257E-7 | 0.070895014 | 3.616975199 | 41.5032506 | 0.199079441 | ||||||
Tb927.5.3910 | small nuclear RNA-activating protein (SNAP2) | RNA processing | Eq9 | 0.004760857 | 108.9777628 | 0.014508116 | 0.012186828 | 0.010006428 | 0.029590279 | ||||||
Tb927.5.3920 | PEX6 peroxisome assembly protein, AAA ATPase | Glycosome biogenesis | Eq9 | 0.006514674 | 0.083137064 | 0.019624784 | 14.85706337 | 11.40561819 | 0.036969041 | ||||||
Tb927.5.3930 | hypothetical protein, conserved | 0 | Eq9 | 4.06885E-4 | 0.102175082 | 0.006134935 | 10.39483472 | 7.407438755 | 0.022909312 | ||||||
Tb927.5.3940 | helicase, putative | DNA synthesis, modification, repair | Exponential | 0.067550836 | 0 | 0 | 14.80366573 | 10.26112318 | 0.037256068 | ||||||
Tb927.5.3950 | hypothetical protein, conserved | 0 | Exponential | 0.007415956 | 0 | 0 | 134.8443748 | 93.46699476 | 0.106538363 | ||||||
Tb927.5.3960 | arginine N-methyltransferase, type I (PRMT6) | Arginine methylation | Eq9 | 0.002847203 | 0.082384254 | 0.019343508 | 13.45972142 | 9.772531986 | 0.038991691 | ||||||
Tb927.5.3970 | adenylate kinase, putative (ADKE) | Nucleotides | Eq10 | 0.15661373 | 6.16268E-7 | 0.148957383 | 1.889423959 | 19.67531919 | 0.062124121 | ||||||
Tb927.5.3980 | Mitchondrial LSU ribosomal protein | Mitochondrial translation | Eq10 | 0.161012872 | 1.01E-10 | 0.054230296 | 32.82359656 | 25.37251711 | 0.06679801 | ||||||
Tb927.5.4020 | hypothetical protein no clear yeast or human matches | 0 | Exponential | 0.05235729 | 0 | 0 | 19.09953714 | 13.23879004 | 0.092187345 | ||||||
Tb927.5.4030 | LSm7 | RNA processing | Eq9 | 0.109082468 | 1.666879318 | 0.03369531 | 2.385929148 | 13.15071344 | 0.058344218 | ||||||
Tb927.5.4040 | Mitchondrial SSU ribosomal associated (coiled coil) | Mitochondrial translation | Eq10 | 0.094052174 | 0 | 0.092957614 | 0.743883014 | 32.55126715 | 0.278423687 | ||||||
Tb927.5.4050 | hypothetical protein, conserved | 0 | Exponential | 0.031942728 | 0 | 0 | 31.3060301 | 21.6996932 | 0.068782835 | ||||||
Tb927.5.4060 | hypothetical protein, conserved | 0 | Eq10 | 0.20242958 | 3.928E-9 | 0.199229922 | 0.469752962 | 15.13463259 | 0.047445094 | ||||||
Tb927.5.4070 | hypothetical protein, DNA primase domain | 0 | Exponential | 0.041745437 | 0 | 0 | 23.95471379 | 16.6041398 | 0.039842997 | ||||||
Tb927.5.4080 | hypothetical protein, conserved | 0 | Eq10 | 0.133958661 | 2.97181E-7 | 0.125275497 | 2.937121471 | 23.07232618 | 0.064465607 | ||||||
Tb927.5.4090 | hypothetical protein, conserved, kinetoplastid-specific | 0 | Exponential | 0.07172338 | 0 | 0 | 13.94245498 | 9.664170742 | 0.044457909 | ||||||
Tb927.5.410 | hypothetical protein | 0 | Exponential | 0.058599453 | 0 | 0 | 17.06500577 | 11.82856321 | 0.0970862 | ||||||
Tb927.5.4100 | hypothetical protein, conserved | 0 | Eq9 | 9.25074E-5 | 0.085874943 | 0.003911331 | 11.90742695 | 8.336126804 | 0.03042799 | ||||||
Tb927.5.4110 | hypothetical protein, conserved | 0 | Eq9 | 0.001352841 | 0.129315648 | 0.011762462 | 8.533146803 | 6.195380688 | 0.029044502 | ||||||
Tb927.5.4120 | Mitchondrial LSU ribosomal protein | Mitochondrial translation | Eq10 | 0.221055137 | 1.0E-12 | 0.077735396 | 23.0051488 | 18.17837477 | 0.023130945 | ||||||
Tb927.5.4130 | hypothetical protein, conserved | 0 | Eq10 | 0.16038625 | 3.05614E-7 | 0.152307949 | 1.901128945 | 19.21872854 | 0.059655089 | ||||||
Tb927.5.4140 | hypothetical protein, conserved | 0 | Eq9 | 3.60938E-4 | 0.084805108 | 0.005396502 | 12.52710237 | 8.92772913 | 0.024010632 | ||||||
Tb927.5.4150 | hypothetical protein, conserved | 0 | Eq10 | 0.163159315 | 0.005919114 | 0.050314187 | 32.94558153 | 23.69851828 | 0.045836176 | ||||||
Tb927.5.4160 | hypothetical protein, conserved | 0 | Eq9 | 0.034666364 | 3.344997296 | 0.012595015 | 1.110284351 | 30.72304487 | 0.137750621 | ||||||
Tb927.5.4170 | histone H4 | Chromatin | Exponential | 0.001228015 | 0 | 0 | 814.3226287 | -1 | 0.502305424 | ||||||
Tb927.5.4270 | ATP-dependent DEAD/H RNA helicase, putative Hca4, ribosome biogenesis? | rRNA tRNA processing | Eq10 | 0.201963334 | 0 | 0.068355227 | 26.05594775 | 20.18974543 | 0.093199257 | ||||||
Tb927.5.4280 | hypothetical protein, conserved | 0 | Eq9 | 3.43791E-4 | 0.09867284 | 0.005621005 | 10.71700574 | 7.621171474 | 0.02392627 | ||||||
Tb927.5.4290 | hypothetical protein, conserved | 0 | Eq9 | 1.80666E-4 | 0.100235654 | 0.004258263 | 10.38105298 | 7.326514721 | 0.03740812 | ||||||
Tb927.5.4300 | prolyl oligopeptidase, putative,Serine peptidase, Clan SC, Family S9A | Protease or peptidase | Exponential | 0.049447029 | 0 | 0 | 20.22366191 | 14.01797533 | 0.044225195 | ||||||
Tb927.5.4310 | GTP-binding protein, putative | Enzyme | Eq10 | 0.206289806 | 1.0E-12 | 0.055947203 | 30.69074937 | 21.67649031 | 0.103183639 | ||||||
Tb927.5.4320 | zinc finger protein family member, putative (FIP1) | DNA synthesis, modification, repair | Eq10 | 0.109204953 | 0 | 0.108707997 | 0.250213638 | 28.00135374 | 0.080451725 | ||||||
Tb927.5.4330 | dihydrolipoamide branched chain transacylase, putative | Mitochondrial pathway | Eq10 | 0.250575371 | 2.0E-12 | 0.0745264 | 23.44656175 | 17.14505911 | 0.068709569 | ||||||
Tb927.5.4340 | hypothetical protein, conserved | 0 | Exponential | 0.021704147 | 0 | 0 | 46.07414446 | 31.93616152 | 0.123951595 | ||||||
Tb927.5.4350 | NUDIX hydrolase, putative | Enzyme | Exponential | 0.040876117 | 0 | 0 | 24.46416341 | 16.95726156 | 0.098468491 | ||||||
Tb927.5.4360 | hypothetical protein, conserved | 0 | Exponential | 0.04224413 | 0 | 0 | 23.67192795 | 16.40813112 | 0.103013471 | ||||||
Tb927.5.4370 | hypothetical protein, conserved | 0 | Exponential | 0.039124847 | 0 | 0 | 25.5592056 | 17.71629095 | 0.089358081 | ||||||
Tb927.5.4380 | kinetoplastid-specific phospho-protein phosphatase, putative | Protein phosphatase | Eq10 | 0.032434233 | 0 | 0.031461452 | 5.576880641 | 94.6923852 | 0.398396835 | ||||||
Tb927.5.4390 | hypothetical protein, conserved | 0 | Eq10 | 0.094455365 | 1.92343E-4 | 0.06015537 | 25.42518522 | 35.1555419 | 0.084298669 | ||||||
Tb927.5.440 | trans sialidase, putative | Membrane protein | Exponential | 0.004379723 | 0 | 0 | 228.324942 | 158.2627845 | 0.655804629 | ||||||
Tb927.5.4400 | hypothetical protein, conserved | 0 | Eq9 | 0.00258653 | 0.092534745 | 0.016071931 | 12.204784 | 8.952863216 | 0.023695043 | ||||||
Tb927.5.4410 | hypothetical protein, conserved | 0 | Eq10 | 0.263952565 | 2.0E-12 | 0.079885496 | 21.93909918 | 16.15772009 | 0.039596982 | ||||||
Tb927.5.4420 | nucleolar RNA helicase 2 human, DDX50 Mouse | rRNA tRNA processing | Exponential | 0.006838495 | 0 | 0 | 146.2310099 | 101.3596129 | 0.441098963 | ||||||
Tb927.5.4440 | dynein light chain, putative | Cytoskeleton | Eq10 | 0.050820246 | 0.001576038 | 0.039137819 | 35.03541652 | 54.42443132 | 0.088280681 | ||||||
Tb927.5.4450 | hypothetical protein, conserved | 0 | Exponential | 0.046733919 | 0 | 0 | 21.39773478 | 14.831779 | 0.066260036 | ||||||
Tb927.5.4460 | major vault protein, putative (MVP) | Enzyme | Exponential | 0.01963141 | 0 | 0 | 50.93877697 | 35.30806303 | 0.164893172 | ||||||
Tb927.5.4470 | hypothetical protein, conserved | 0 | Exponential | 0.033273538 | 0 | 0 | 30.05391251 | 20.83178759 | 0.08401918 | ||||||
Tb927.5.4480 | paraflagellar rod protein par4, putative | Cytoskeleton | Exponential | 0.011732646 | 0 | 0 | 85.23226765 | 59.07850027 | 0.362321628 | ||||||
Tb927.5.4490 | hypothetical protein, conserved | 0 | Eq9 | 0.001072959 | 0.076578409 | 0.006261315 | 15.08490183 | 11.22623205 | 0.047488827 | ||||||
Tb927.5.450 | NADH-ubiquinone oxidoreductase, mitochondrial, putative | Mitochondrial electron transport | Eq10 | 0.06722566 | 3.41378E-7 | 0.063554581 | 4.922246459 | 45.88462114 | 0.088875852 | ||||||
Tb927.5.4500 | ras-like small GTPase, putative (TbSAR1) | Vesicular transport | Eq10 | 0.054820232 | 4.8555E-8 | 0.052577771 | 4.509216068 | 56.13216162 | 0.219868807 | ||||||
Tb927.5.4510 | hypothetical protein, conserved | 0 | Exponential | 0.008087383 | 0 | 0 | 123.649396 | 85.70722818 | 0.381624462 | ||||||
Tb927.5.4520 | hypothetical protein, conserved, spectrin repeat, prefoldin domains | 0 | Eq10 | 0.144897946 | 8.0E-12 | 0.020411478 | 71.73674124 | 44.06147718 | 0.135841304 | ||||||
Tb927.5.4530 | Elongase 4 | Lipids & fatty acids | Exponential | 0.012046587 | 0 | 0 | 83.01106358 | 57.53888369 | 0.272175145 | ||||||
Tb927.5.4540 | GRESAG 4, putative receptor-type adenylate cyclase | GRESAG | Eq9 | 0.002054444 | 0.047590018 | 0.008995675 | 24.74357141 | 18.54518652 | 0.041002553 | ||||||
Tb927.5.4560 | guanine deaminase, putative | Nucleotides | Eq10 | 0.099514947 | 0 | 0.099323998 | 0.115580424 | 30.75255632 | 0.207851407 | ||||||
Tb927.5.460 | hypothetical protein, conserved, poly(N) | 0 | Exponential | 0.018160993 | 0 | 0 | 55.06306706 | 38.16681147 | 0.281374057 | ||||||
Tb927.5.480 | hypothetical protein, conserved | 0 | Exponential | 0.060722256 | 0 | 0 | 16.46842628 | 11.41504526 | 0.063346883 | ||||||
Tb927.5.490 | methyltransferase, putative | Enzyme | Eq10 | 0.334540954 | 6.231E-9 | 0.066908711 | 23.91322479 | 15.52065611 | 0.051428102 | ||||||
Tb927.5.500 | in situ HA-tagged protein colocalizes with mitochondrion (TRitrypDB comment) | Mitochondrial pathway | Eq10 | 0.148301776 | 8.93E-10 | 0.02564522 | 60.13544726 | 37.97106028 | 0.10086813 | ||||||
Tb927.5.510 | SDH10 homogue, succinate dehydrogenase complex | Mitochondrial pathway | Eq10 | 0.035118983 | 3.0066E-8 | 0.034188186 | 4.54920702 | 87.39646196 | 0.240893966 | ||||||
Tb927.5.520 | stomatin-like protein, putative | Mitochondrial pathway | Eq10 | 0.075967146 | 2.24373E-7 | 0.07275495 | 3.364989961 | 40.51445246 | 0.176395168 | ||||||
Tb927.5.530 | hypothetical protein, conserved | 0 | Exponential | 0.044637564 | 0 | 0 | 22.40265612 | 15.52833796 | 0.085593665 | ||||||
Tb927.5.550 | vacuolar ATP synthase, putative | Lysosome | Eq10 | 0.230852262 | 0 | 0.075921061 | 23.37565725 | 17.86246061 | 0.043705649 | ||||||
Tb927.5.560 | hypothetical protein, conserved | 0 | Eq9 | 4.81366E-4 | 0.084372081 | 0.007154786 | 12.57790867 | 8.957698345 | 0.039718459 | ||||||
Tb927.5.580 | prefoldin subunit, putative | Chaperone | Eq10 | 0.038671469 | 7.6373E-8 | 0.037499165 | 4.728905259 | 79.41808462 | 0.186548349 | ||||||
Tb927.5.590 | protein phosphatase 1, regulatory subunit, putative | Protein phosphatase | Eq10 | 0.258079206 | 3.0E-12 | 0.04676374 | 33.37267274 | 21.24303102 | 0.062162501 | ||||||
Tb927.5.600 | hypothetical protein, conserved | 0 | Exponential | 0.010388771 | 0 | 0 | 96.25777923 | 66.72080755 | 0.306997739 |
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Gene | Method PC | Method BF | |||||||
Tb927.3.2230 | Eq10 | Eq10 | |||||||
Tb927.7.4260 | Eq10 | Eq10 | |||||||
Tb927.3.5330 | Eq10 | Eq10 | |||||||
Tb927.6.3340 | Eq10 | Eq10 | |||||||
Tb927.11.11030 | Eq10 | Eq10 | |||||||
Tb927.11.1440 | Eq10 | Eq10 | |||||||
Tb927.11.4050 | Eq10 | Eq10 | |||||||
Tb927.6.1270 | Eq10 | Eq10 | |||||||
Tb927.5.2860 | Eq10 | Eq10 | |||||||
Tb927.3.3360 | Eq10 | Eq10 | |||||||
Tb927.10.9400 | Eq10 | Eq10 | |||||||
Tb927.6.3210 | Eq10 | Eq10 | |||||||
Tb927.8.5230 | Eq10 | Eq10 | |||||||
Tb927.10.5790 | Eq10 | Eq10 | |||||||
Tb927.10.15430 | Eq10 | Eq10 | |||||||
Tb927.10.7140 | Eq10 | Eq10 | |||||||
Tb927.10.730 | Eq10 | Eq10 | |||||||
Tb927.10.8800 | Eq10 | Eq10 | |||||||
Tb927.10.12980 | Eq10 | Eq10 | |||||||
Tb927.3.1390 | Eq10 | Eq10 | |||||||
Tb927.10.4230 | Eq10 | Eq10 | |||||||
Tb927.4.2170 | Eq10 | Eq10 | |||||||
Tb927.5.4410 | Eq10 | Eq10 | |||||||
Tb927.9.13770 | Eq10 | Eq10 | |||||||
Tb927.9.15490 | Eq10 | Eq10 | |||||||
Tb927.8.6780 | Eq10 | Eq10 | |||||||
Tb927.7.1330 | Eq10 | Eq10 | |||||||
Tb927.10.3620 | Eq10 | Eq10 | |||||||
Tb927.7.2270 | Eq10 | Eq10 | |||||||
Tb927.11.11510 | Eq10 | Eq10 | |||||||
Tb927.9.8550 | Eq10 | Eq10 | |||||||
Tb927.7.5740 | Eq10 | Eq10 | |||||||
Tb927.5.310 | Eq10 | Eq10 | |||||||
Tb927.11.8260 | Eq10 | Eq10 | |||||||
Tb927.11.710 | Eq10 | Eq10 | |||||||
Tb927.9.11700 | Eq10 | Eq10 | |||||||
Tb927.7.4710 | Eq10 | Eq10 | |||||||
Tb927.1.990 | Eq10 | Eq10 | |||||||
Tb927.11.11720 | Eq10 | Eq10 | |||||||
Tb927.11.11670 | Eq10 | Eq10 | |||||||
Tb927.11.7310 | Eq10 | Eq10 | |||||||
Tb927.11.15220 | Eq10 | Eq10 | |||||||
Tb927.11.1730 | Eq10 | Eq10 | |||||||
Tb927.6.1410 | Eq10 | Eq10 | |||||||
Tb927.11.3790 | Eq10 | Eq10 | |||||||
Tb927.11.13130 | Eq10 | Eq10 | |||||||
Tb927.10.1430 | Eq10 | Eq10 | |||||||
Tb927.11.11660 | Eq10 | Eq10 | |||||||
Tb927.10.7740 | Eq10 | Eq10 | |||||||
Tb927.10.1230 | Eq10 | Eq10 | |||||||
Tb927.10.9180 | Eq10 | Eq10 | |||||||
Tb927.10.3470 | Eq10 | Eq10 | |||||||
Tb927.5.550 | Eq10 | Eq10 | |||||||
Tb927.10.4510 | Eq10 | Eq10 | |||||||
Tb927.11.15760 | Eq10 | Eq10 | |||||||
Tb927.5.1020 | Eq10 | Eq10 | |||||||
Tb927.10.8690 | Eq10 | Eq10 | |||||||
Tb927.9.15050 | Eq10 | Eq10 | |||||||
Tb927.3.5320 | Eq10 | Eq10 | |||||||
Tb927.7.1360 | Eq10 | Eq10 | |||||||
Tb927.3.3260 | Eq10 | Eq10 | |||||||
Tb927.10.15240 | Eq10 | Eq10 | |||||||
Tb927.11.15400 | Eq10 | Eq10 | |||||||
Tb927.6.4080 | Eq10 | Eq10 | |||||||
Tb927.11.14900 | Eq10 | Eq10 | |||||||
Tb927.10.15940 | Eq10 | Eq10 | |||||||
Tb927.10.8400 | Eq10 | Eq10 | |||||||
Tb927.9.1500 | Eq10 | Eq10 | |||||||
Tb927.6.4520 | Eq10 | Eq10 | |||||||
Tb927.11.250 | Eq10 | Eq10 | |||||||
Tb927.7.2260 | Eq10 | Eq10 | |||||||
Tb927.10.15000 | Eq10 | Eq10 | |||||||
Tb927.5.3460 | Eq10 | Eq10 | |||||||
Tb927.10.6870 | Eq10 | Eq10 | |||||||
Tb927.9.5260 | Eq10 | Eq10 | |||||||
Tb927.8.3430 | Eq10 | Eq10 | |||||||
Tb927.10.350 | Eq10 | Eq10 | |||||||
Tb927.8.1100 | Eq10 | Eq10 | |||||||
Tb927.5.3710 | Eq10 | Eq10 | |||||||
Tb927.11.2330 | Eq10 | Eq10 | |||||||
Tb927.7.1170 | Eq10 | Eq10 | |||||||
Tb927.1.3260 | Eq10 | Eq10 | |||||||
Tb927.10.1960 | Eq10 | Eq10 | |||||||
Tb927.11.12500 | Eq10 | Eq10 | |||||||
Tb927.11.10610 | Eq10 | Eq10 | |||||||
Tb927.11.15430 | Eq10 | Eq10 | |||||||
Tb927.6.3540 | Eq10 | Eq10 | |||||||
Tb927.6.3890 | Eq10 | Eq10 | |||||||
Tb927.11.7370 | Eq10 | Eq10 | |||||||
Tb927.2.3480 | Eq10 | Eq10 | |||||||
Tb927.6.3000 | Eq10 | Eq10 | |||||||
Tb927.6.1230 | Eq10 | Eq10 | |||||||
Tb927.11.13200 | Eq10 | Eq10 | |||||||
Tb927.8.5510 | Eq10 | Eq10 | |||||||
Tb927.9.10470 | Eq10 | Eq10 | |||||||
Tb927.10.3590 | Eq10 | Eq10 | |||||||
Tb927.6.1830 | Eq10 | Eq10 | |||||||
Tb927.2.5150 | Eq10 | Eq10 | |||||||
Tb927.10.9130 | Eq10 | Eq10 |