Selected Cell
Cell:
Value:
metadata
BF HL
PC HL
switching method
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Decay models published in Deneke et al. were used to fit the decay data of mRNA and calculate half-lives (HL) | |||||||||
BF =bloodform | |||||||||
PC =procyclic | |||||||||
Eq9 = fast-to-slow decay | |||||||||
Eq10 = slow-to-fast decay | |||||||||
lambda = rate of transition between states | |||||||||
mu = rate of degradation | |||||||||
nu = rate of initial degradation | |||||||||
U = transcript lifetime | |||||||||
Error = least squares | |||||||||
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Gene | Description | Class | Method | lambda | mu | nu | U | Half-life | Error |
Tb11.02.5105 | POMP15 | Mitochondrial membrane | Eq9 | 5.26617E-4 | 0.123244291 | 0.005673454 | 8.829387307 | 6.369142532 | 0.115963143 |
Tb11.02.5360 | hypothetical protein, conserved | 0 | Eq9 | 0.004019246 | 0.175774495 | 0.007842417 | 8.412423062 | 7.552442551 | 0.060071011 |
Tb11.02.5370 | hypothetical protein, conserved | 0 | Eq9 | 0.003315379 | 0.131873533 | 0.006356238 | 11.25532064 | 10.13274193 | 0.146500316 |
Tb11.02.5380 | RRP44 | RNA degradation | Eq9 | 4.6989E-4 | 0.089878778 | 0.003310893 | 12.63906385 | 9.329805374 | 0.057657916 |
Tb11.02.5390 | MRB complex protein | Mitochondrial RNA | Exponential | 0.078149193 | 0 | 0 | 12.79603743 | 8.869543076 | 0.080184984 |
Tb11.02.5400 | cystathionine beta-synthase, putative | Amino acid metabolism | Eq9 | 0.002056443 | 0.184243038 | 0.007079225 | 6.92696406 | 5.499887466 | 0.061057943 |
Tb11.02.5430 | hypothetical protein, conserved | 0 | Eq9 | 1.53965E-4 | 0.079748147 | 5.57738E-4 | 15.97019446 | 12.69282341 | 0.128357989 |
Tb11.02.5440 | hypothetical protein, conserved | 0 | Eq9 | 0.005648236 | 0.182520238 | 0.013482816 | 7.540695004 | 6.312589645 | 0.09790524 |
Tb927.1.1000 | developmentally regulated phosphoprotein (dr6) | Mitochondrial pathway | Eq9 | 6.13091E-4 | 0.135448817 | 0.005335703 | 8.194089442 | 5.972490311 | 0.0385342 |
Tb927.1.1010 | hypothetical protein, conserved | 0 | Eq9 | 0.008093727 | 0.132915333 | 0.010154909 | 12.7440468 | 13.14595222 | 0.102422156 |
Tb927.1.1020 | hypothetical protein, conserved | 0 | Exponential | 0.050907647 | 0 | 0 | 19.64341414 | 13.61577034 | 0.100589356 |
Tb927.1.1030 | leucine-rich repeat protein (LRRP) | LRRP | Eq9 | 0.001398187 | 0.103768698 | 0.010281853 | 10.80174542 | 7.90520668 | 0.041324878 |
Tb927.1.1040 | hypothetical protein, conserved | 0 | Eq9 | 0.045878661 | 0.479297331 | 0.036063073 | 4.326508423 | 6.048574448 | 0.033703879 |
Tb927.1.1050 | hypothetical protein, conserved | 0 | Eq9 | 0.004021964 | 0.103007674 | 0.011008577 | 12.75673017 | 10.27554512 | 0.036915422 |
Tb927.1.1060 | hypothetical protein, conserved, PCNA superfamily with putative DNA-binding site, low match to yeast Rad17 | 0 | Eq9 | 0.014350793 | 0.172571595 | 0.022857755 | 8.708589633 | 7.742605209 | 0.074486134 |
Tb927.1.1080 | TFIIH basal transcription factor subunit (TSP1) | RNA synthesis | Eq9 | 0.00348519 | 0.121617184 | 0.015618672 | 9.77713286 | 7.384328842 | 0.079758087 |
Tb927.1.1100 | hypothetical protein, conserved, myosin-like | 0 | Eq9 | 0.002998155 | 0.099783266 | 0.01199317 | 12.16161951 | 9.298315048 | 0.033233016 |
Tb927.1.1120 | hypothetical protein, conserved | 0 | Exponential | 0.07729216 | 0 | 0 | 12.93792283 | 8.967885971 | 0.10361782 |
Tb927.1.1130 | glycerol-3-phosphate dehydrogenase (FAD-dependent), putative | Glucose & glycerol | Eq9 | 0.066292406 | 40.67786428 | 0.017755681 | 0.116178341 | 25.69708824 | 0.090062796 |
Tb927.1.1140 | hypothetical protein, conserved | 0 | Eq9 | 0.018165592 | 7.11016547 | 0.021086628 | 0.261137489 | 0.366125107 | 0.068528049 |
Tb927.1.1150 | zeta tubulin | Cytoskeleton | Eq9 | 0.018247569 | 74.08433222 | 0.021352718 | 0.025027176 | 0.035295486 | 0.122689996 |
Tb927.1.1160 | PPR3 | Mitochondrial translation | Eq9 | 0.030727573 | 8.62174173 | 0.027172366 | 0.246269473 | 2.308835983 | 0.057672543 |
Tb927.1.1200 | Mitchondrial SSU ribosomal protein | Mitochondrial translation | Eq9 | 0.005248924 | 0.131733513 | 0.021641825 | 9.070769403 | 6.85997963 | 0.051809109 |
Tb927.1.1220 | hypothetical protein, conserved | 0 | Eq9 | 0.020956007 | 0.159371396 | 0.024950776 | 10.20307501 | 9.608392715 | 0.055913645 |
Tb927.1.1230 | chaperone protein DNAj, putative | Chaperone | Eq9 | 0.022851205 | 0.370012819 | 0.021295529 | 5.276766598 | 7.020196915 | 0.125560179 |
Tb927.1.1240 | CTP synthase | Nucleotides | Eq10 | 0.074160075 | 7.186E-8 | 0.071569853 | 2.843146112 | 41.44901991 | 0.086234342 |
Tb927.1.1270 | homocysteine S-methyltransferase, putative | Amino acid metabolism | Exponential | 0.046749379 | 0 | 0 | 21.39065858 | 14.8268795 | 0.100384232 |
Tb927.1.1300 | hypothetical protein, conserved | 0 | Eq9 | 0.067699377 | 0.386298771 | 0.089811607 | 3.862996327 | 3.325872421 | 0.039770465 |
Tb927.1.1310 | hypothetical protein, conserved | 0 | Exponential | 0.103812587 | 0 | 0 | 9.632743324 | 6.676912308 | 0.051731812 |
Tb927.1.1330 | Mitochondrial Editosome-like Complex TUTase (MEAT1) | Mitochondrial RNA | Eq9 | 1.21037E-4 | 0.147141817 | 0.003073245 | 7.058018508 | 4.977254868 | 0.039408173 |
Tb927.1.1340 | FG-GAP repeat protein, putative,intergrin alpha chain protein, putative | Cytoskeleton | Eq9 | 0.003020637 | 0.136442429 | 0.015409099 | 8.575958245 | 6.422109604 | 0.02581624 |
Tb927.1.1350 | kinesin heavy chain, putative | Cytoskeleton | Eq9 | 0.001601277 | 0.10930983 | 0.007781759 | 10.87152782 | 8.226747513 | 0.060095355 |
Tb927.1.1370 | rRNA biogenesis protein, putative | rRNA tRNA processing | Eq10 | 0.432916136 | 1.4E-11 | 0.082149258 | 19.22100507 | 12.34148979 | 0.053209773 |
Tb927.1.1380 | serine/threonine protein phosphatase 2A regulatory subunit, putative | Protein kinase | Eq10 | 0.440408306 | 8.0E-12 | 0.066106057 | 22.50556739 | 13.92418861 | 0.088813592 |
Tb927.1.1390 | hypothetical protein, conserved | 0 | Exponential | 0.063883946 | 0 | 0 | 15.65338488 | 10.85009575 | 0.133786204 |
Tb927.1.1400 | hypothetical protein, conserved | 0 | Exponential | 0.074193381 | 0 | 0 | 13.47829123 | 9.342432022 | 0.127488266 |
Tb927.1.1420 | hypothetical protein, conserved | 0 | Exponential | 0.05125436 | 0 | 0 | 19.51053518 | 13.52366447 | 0.093674969 |
Tb927.1.1500 | hypothetical protein, conserved | 0 | Eq10 | 0.063314134 | 7.149E-9 | 0.062181786 | 1.700025143 | 48.4058404 | 0.161773598 |
Tb927.1.1530 | protein kinase, putative | Protein kinase | Exponential | 0.071032879 | 0 | 0 | 14.07798778 | 9.758119583 | 0.045907288 |
Tb927.1.1540 | hypothetical protein, conserved | 0 | Eq10 | 0.75477809 | 0 | 0.106241301 | 13.77965783 | 8.462915421 | 0.080946742 |
Tb927.1.1550 | tubulin-tyrosine ligase, putative | Cytoskeleton | Eq10 | 0.416412984 | 3.04E-10 | 0.085950159 | 18.76211667 | 12.26218224 | 0.083834285 |
Tb927.1.1560 | vesicular-fusion protein nsf, putative,N-ethylmaleimide sensitive factor (NsF) | Vesicular transport | Eq9 | 7.86479E-4 | 0.088326524 | 0.006533569 | 12.57252025 | 9.160757065 | 0.055012918 |
Tb927.1.1600 | hypothetical protein, conserved | 0 | Eq9 | 0.002070686 | 0.085920747 | 0.010768685 | 13.55004351 | 10.11439323 | 0.035272665 |
Tb927.1.1610 | hypothetical protein, conserved | 0 | Eq9 | 0.024788576 | 0.27276764 | 0.039989755 | 5.443923146 | 4.774637222 | 0.059495867 |
Tb927.1.1620 | ATP-dependent DEAD/H RNA helicase, putative, no clear yeast homologue | RNA helicase | Eq9 | 3.44084E-5 | 0.06453995 | 6.18727E-4 | 16.3472254 | 11.61629677 | 0.071618049 |
Tb927.1.1630 | hypothetical protein, conserved | 0 | Eq9 | 2.95578E-4 | 0.101698146 | 0.00317111 | 10.71840218 | 7.740182877 | 0.051840568 |
Tb927.1.1640 | hypothetical protein, conserved | 0 | Eq9 | 0.020193964 | 0.64508993 | 0.024780623 | 2.728022575 | 3.095426559 | 0.056763259 |
Tb927.1.1660 | hypothetical protein, conserved | 0 | Eq9 | 0.01185005 | 0.168189195 | 0.019667722 | 8.900906962 | 7.922239304 | 0.065213864 |
Tb927.1.1670 | hypothetical protein, conserved | 0 | Eq10 | 0.176693869 | 2.62515E-7 | 0.170309232 | 1.234832528 | 17.40000725 | 0.191131968 |
Tb927.1.1680 | hypothetical protein, conserved | 0 | Eq9 | 7.53716E-4 | 0.134280314 | 0.006239122 | 8.300165723 | 6.06253624 | 0.05533899 |
Tb927.1.1690 | RNA editing endoribonuclease (KREN1) | Mitochondrial RNA | Eq9 | 0.004884406 | 0.118749913 | 0.011485579 | 11.5280631 | 9.578485489 | 0.103353432 |
Tb927.1.1700 | hypothetical protein, conserved | 0 | Exponential | 0.027480967 | 0 | 0 | 36.38882088 | 25.22280693 | 0.140861048 |
Tb927.1.1710 | hypothetical protein, conserved | 0 | Eq10 | 0.092148727 | 0 | 0.089925279 | 1.577558785 | 33.29527617 | 0.224110813 |
Tb927.1.1720 | hypothetical protein, conserved | 0 | Eq9 | 0.017215084 | 6.760676151 | 0.023408721 | 0.256040296 | 0.295248032 | 0.083569195 |
Tb927.1.1730 | hypothetical protein, conserved | 0 | Eq9 | 2.45628E-4 | 0.065998483 | 0.002301604 | 16.70669772 | 12.13599205 | 0.083698669 |
Tb927.1.1750 | hypothetical protein, conserved | 0 | Exponential | 0.029387449 | 0 | 0 | 34.0281318 | 23.58651161 | 0.153552483 |
Tb927.1.1790 | hypothetical protein | 0 | Exponential | 0.103257544 | 0 | 0 | 9.684522404 | 6.712808609 | 0.101734364 |
Tb927.1.1820 | hypothetical protein, conserved | 0 | Exponential | 0.0885198 | 0 | 0 | 11.29690756 | 7.83041954 | 0.054418168 |
Tb927.1.1840 | hypothetical protein, conserved | 0 | Eq9 | 0.001176622 | 0.105590486 | 0.006836839 | 10.97810321 | 8.190069199 | 0.064184917 |
Tb927.1.1850 | hypothetical protein, conserved | 0 | Exponential | 0.065693405 | 0 | 0 | 15.22222816 | 10.55125237 | 0.093727241 |
Tb927.1.1880 | hypothetical protein, conserved | 0 | Eq9 | 0.020389391 | 0.214891099 | 0.026613352 | 7.506503801 | 7.130861282 | 0.072812112 |
Tb927.1.1890 | hypothetical protein, conserved | 0 | Eq9 | 0.078443034 | 0.567368102 | 0.018370358 | 8.160415644 | 27.84878731 | 0.102283256 |
Tb927.1.1910 | hypothetical protein, conserved | 0 | Eq9 | 0.006637384 | 0.133948659 | 0.014551054 | 10.35767519 | 8.679265976 | 0.054379885 |
Tb927.1.1920 | hypothetical protein, conserved | 0 | Eq9 | 0.03782731 | 0.245380824 | 0.026168739 | 8.635045841 | 11.22584343 | 0.060280186 |
Tb927.1.1930 | TbTOR4 = TOR-like 2 | Signalling | Exponential | 0.028522647 | 0 | 0 | 35.05985961 | 24.30163383 | 0.176184612 |
Tb927.1.1960 | chaperone protein DNAj, putative | Chaperone | Eq10 | 0.276878643 | 0 | 0.275336968 | 0.120772772 | 11.04594231 | 0.053556315 |
Tb927.1.1980 | hypothetical protein, conserved | 0 | Eq10 | 0.47631374 | 3.82272E-7 | 0.468255596 | 0.21375379 | 6.432981491 | 0.070387982 |
Tb927.1.1990 | hypothetical protein, conserved | 0 | Eq10 | 1.114019303 | 1.3E-11 | 0.261123919 | 6.368163924 | 4.297208786 | 0.017868104 |
Tb927.1.2110 | calpain-like cysteine peptidase, putative,cysteine peptidase, Clan CA, family C2, putative | Protease or peptidase | Eq9 | 0.008315175 | 0.255051397 | 0.008193447 | 7.650389098 | 11.14460945 | 0.136703513 |
Tb927.1.2120 | calpain, putative,cysteine peptidase, Clan CA, family C2, putative | Protease or peptidase | Eq9 | 3.12337E-4 | 0.079503496 | 0.002767525 | 13.94282347 | 10.15675545 | 0.059393322 |
Tb927.1.2190 | RAPTOR-like (TOR complexes) | Signalling | Exponential | 0.068126273 | 0 | 0 | 14.67862475 | 10.17445564 | 0.094238487 |
Tb927.1.2210 | hypothetical protein, conserved | 0 | Eq10 | 0.336158665 | 0.007476488 | 0.100494978 | 16.77157698 | 12.06332207 | 0.053697844 |
Tb927.1.2320 | hypothetical protein, conserved | 0 | Eq9 | 0.006641823 | 0.301538729 | 0.027920766 | 4.016739894 | 3.071603775 | 0.040051367 |
Tb927.1.2330 | beta tubulin | Cytoskeleton | Eq10 | 0.046707193 | 8.8113E-8 | 0.044895083 | 5.018209255 | 65.85524797 | 0.429684988 |
Tb927.1.2340 | alpha tubulin | Cytoskeleton | Eq10 | 0.040001409 | 2.3455E-7 | 0.037396542 | 9.883706959 | 77.26486444 | 0.374199398 |
Tb927.1.2430 | histone H3 | Chromatin | Eq10 | 0.05080012 | 1.0375E-7 | 0.048717453 | 4.87747673 | 60.5732131 | 0.270430141 |
Tb927.1.2570 | coatomer beta subunit (beta-coP) | Vesicular transport | Eq10 | 0.191657196 | 2.77493E-7 | 0.186799155 | 0.797119487 | 16.0106945 | 0.066919031 |
Tb927.1.2580 | EAP1 exosome complex PH subunit | RNA degradation | Eq10 | 0.18701422 | 1.06972E-6 | 0.172464459 | 2.53173328 | 16.56704903 | 0.139427862 |
Tb927.1.2600 | PUF9 | RNA binding | Eq10 | 0.039248544 | 3.1415E-8 | 0.037218152 | 7.980615047 | 78.55767488 | 0.338663053 |
Tb927.1.2640 | hypothetical protein, conserved | 0 | Exponential | 0.071445691 | 0 | 0 | 13.99664538 | 9.701738358 | 0.125855988 |
Tb927.1.2670 | flagellar protein PF16 | Cytoskeleton | Eq10 | 0.119045816 | 0 | 0.116213119 | 1.204159007 | 25.7710743 | 0.111515226 |
Tb927.1.2700 | hypothetical protein, conserved | 0 | Eq9 | 0.015170451 | 0.140391675 | 0.02513971 | 10.30743 | 8.799543381 | 0.067717886 |
Tb927.1.2710 | hypothetical protein, conserved | 0 | Eq9 | 0.003933743 | 0.131418985 | 0.017336397 | 9.064513206 | 6.852331161 | 0.065348819 |
Tb927.1.2730 | hypothetical protein, conserved | 0 | Exponential | 0.055179065 | 0 | 0 | 18.12281522 | 12.56176949 | 0.101015402 |
Tb927.1.2740 | lipase-like protein, putative | Lipids & fatty acids | Eq9 | 3.68176E-4 | 0.084343811 | 0.003085451 | 13.21331915 | 9.652566910000001 | 0.118343656 |
Tb927.1.2750 | hypothetical protein, conserved | 0 | Eq10 | 0.149942191 | 9.7423E-8 | 0.144805657 | 1.378988822 | 20.49807549 | 0.067396507 |
Tb927.1.2770 | hypothetical protein, conserved | 0 | Eq9 | 0.003452529 | 0.345579633 | 0.009672691 | 3.887709747 | 3.212175369 | 0.08719193 |
Tb927.1.2820 | pteridine transporter, putative | Folate | Eq9 | 4.48481E-4 | 0.066661854 | 0.003774602 | 16.67128441 | 12.15596199 | 0.079462099 |
Tb927.1.2970 | hypothetical protein, conserved | 0 | Eq9 | 0.00153286 | 0.159016668 | 0.017116445 | 6.786409374 | 4.871397018 | 0.060952926 |
Tb927.1.2980 | hypothetical protein, conserved | 0 | Eq9 | 0.01639451 | 0.299711991 | 0.021301126 | 5.598286046 | 5.729513168 | 0.043763578 |
Tb927.1.2985 | hypothetical protein, conserved | 0 | Eq9 | 0.062961419 | 0.190847516 | 0.040409702 | 10.07874993 | 10.21672249 | 0.069010835 |
Tb927.1.2990 | PPR2 | Mitochondrial translation | Eq9 | 0.012560093 | 0.176567958 | 0.013891607 | 10.06804508 | 11.04180336 | 0.085991034 |
Tb927.1.3000 | aminoacylase, putative,N-acyl-L-amino acid amidohydrolase, putative | Amino acid metabolism | Eq9 | 0.002774612 | 0.097715171 | 0.01274512 | 12.1176496 | 9.129476547 | 0.079702621 |
Tb927.1.3010 | mRNA processing protein, putative | Mitochondrial RNA | Eq9 | 0.021435246 | 0.135803074 | 0.013065521 | 16.79359323 | 24.3448925 | 0.164380739 |
Tb927.1.3030 | KREL2 | Mitochondrial RNA | Eq9 | 0.003730518 | 0.0792747 | 0.014299595 | 15.19040384 | 11.53012276 | 0.130472165 |
Tb927.1.3040 | hypothetical protein, conserved | 0 | Exponential | 0.044927441 | 0 | 0 | 22.25811148 | 15.42815208 | 0.093356917 |
Tb927.1.3050 | hypothetical protein, conserved | 0 | Eq10 | 0.232237485 | 0 | 0.094312126 | 19.08358865 | 16.43174171 | 0.09515385 |
Tb927.1.3070 | hypothetical protein, conserved, poly(Q), poly(H) | 0 | Exponential | 0.026069203 | 0 | 0 | 38.35943885 | 26.58873558 | 0.239344968 |
Tb927.1.3110 | soluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative | Vesicular transport | Eq10 | 0.329418309 | 0 | 0.153197773 | 11.61138909 | 11.08483315 | 0.059356263 |
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Tb927.5.2290 | U5 splicing factor U5-200K, putative | RNA processing | Eq10 | 0.104097127 | 0 | 0.101237839 | 1.590637789 | 29.4908309 | 0.150536691 | ||||||
Tb927.5.2300 | formin, putative | 0 | Exponential | 0.016443617 | 0 | 0 | 60.81387199 | 42.1529603 | 0.183568183 | ||||||
Tb927.5.2310 | hypothetical protein, conserved | 0 | Exponential | 0.048676456 | 0 | 0 | 20.54381297 | 14.23989058 | 0.054291953 | ||||||
Tb927.5.2320 | hypothetical protein, conserved | 0 | Exponential | 0.007675903 | 0 | 0 | 130.2778303 | 90.30171633 | 0.469114511 | ||||||
Tb927.5.2330 | hypothetical protein, conserved, armadillo repeat, weak PI3/4 kinase domain | 0 | Exponential | 0.014534666 | 0 | 0 | 68.80103291 | 47.68923998 | 0.390960092 | ||||||
Tb927.5.2340 | hypothetical protein, conserved | 0 | Eq9 | 0.003848332 | 0.123430998 | 0.013780261 | 10.0508394 | 7.792003155 | 0.038817766 | ||||||
Tb927.5.2350 | hypothetical protein, conserved | 0 | Eq9 | 0.006987794 | 46.06677559 | 0.007017269 | 0.043317484 | 0.127294064 | 0.089041745 | ||||||
Tb927.5.2360 | hypothetical protein, conserved | 0 | Eq9 | 0.032285468 | 6.258220577 | 0.0112255 | 0.616179802 | 35.32469988 | 0.093561316 | ||||||
Tb927.5.2370 | hydrolase, alpha/beta fold family, putative | Enzyme | Eq9 | 0.006012601 | 0.098760792 | 0.013621701 | 13.75729705 | 11.30449533 | 0.048810979 | ||||||
Tb927.5.2380 | hydrolase, alpha/beta fold family, putative | Enzyme | Eq10 | 0.107435007 | 1.29453E-6 | 0.107349339 | 0.039818097 | 32.2801137 | 0.133812575 | ||||||
Tb927.5.2400 | ubiquitin carboxyl-terminal hydrolase, Clan CA cysteine peptidase, family C12, putative | Ubiquitin & proteasome | Eq10 | 0.072853588 | 2.76801E-7 | 0.068546552 | 4.920843999 | 42.37702131 | 0.132990203 | ||||||
Tb927.5.2410 | kinesin, putative | Cytoskeleton | Exponential | 0.016797923 | 0 | 0 | 59.53116828 | 41.2638545 | 0.23868753 | ||||||
Tb927.5.2420 | hypothetical protein, conserved | 0 | Exponential | 0.041536727 | 0 | 0 | 24.07507955 | 16.68756723 | 0.079982459 | ||||||
Tb927.5.2430 | membrane transporter protein, putative | Transporter | Eq10 | 0.073506403 | 5.00196E-7 | 0.070292884 | 3.597462798 | 41.87731504 | 0.098507842 | ||||||
Tb927.5.2440 | hypothetical protein, conserved | 0 | Eq9 | 0.001066531 | 0.0505031 | 0.008305043 | 21.88147729 | 15.87932825 | 0.049568617 | ||||||
Tb927.5.2460 | hypothetical protein, conserved | 0 | Eq9 | 0.002007409 | 0.099397871 | 0.011326163 | 11.60922232 | 8.626406193 | 0.03973608 | ||||||
Tb927.5.2470 | hypothetical protein, conserved | 0 | Exponential | 0.067884877 | 0 | 0 | 14.73082141 | 10.21062613 | 0.033777686 | ||||||
Tb927.5.2520 | hypothetical protein, conserved | 0 | Eq10 | 0.11937312 | 0 | 0.118806719 | 0.238676024 | 25.6166482 | 0.155023211 | ||||||
Tb927.5.2530 | hypothetical protein, conserved | 0 | Exponential | 0.012851871 | 0 | 0 | 77.80968484 | 53.93356562 | 0.445249068 | ||||||
Tb927.5.2550 | hypothetical protein, conserved | 0 | Eq10 | 0.097830359 | 0 | 0.096458838 | 0.861855372 | 31.30686522 | 0.111497926 | ||||||
Tb927.5.2560 | hypothetical protein, conserved, no known domains | 0 | Exponential | 0.005241104 | 0 | 0 | 190.7994905 | 132.2521234 | 0.50483662 | ||||||
Tb927.5.2570 | EIF3B translation initiation factor, putative () | Translation | Exponential | 0.00620129 | 0 | 0 | 161.2567615 | 111.7746663 | 0.520807812 | ||||||
Tb927.5.2580 | hypothetical protein, possible component of cytochorome oxidase complex | Mitochondrial electron transport | Eq10 | 0.110328116 | 0 | 0.021481894 | 73.98222636 | 47.74839163 | 0.148236974 | ||||||
Tb927.5.2590 | hypothetical protein, conserved | 0 | Exponential | 0.070505347 | 0 | 0 | 14.18332135 | 9.831125736 | 0.057679617 | ||||||
Tb927.5.2600 | hypothetical protein, conserved, weak SAM-dependent methyltransferase domain. | 0 | Exponential | 0.042281126 | 0 | 0 | 23.65121513 | 16.39376879 | 0.097260363 | ||||||
Tb927.5.2610 | hypothetical protein, conserved | 0 | Exponential | 0.075464429 | 0 | 0 | 13.25127625 | 9.185078144 | 0.040272464 | ||||||
Tb927.5.2620 | hypothetical protein, conserved, ubiquitin-like C-terminus, no yeast or human match | 0 | Eq10 | 0.08363003 | 1.38707E-7 | 0.080867975 | 2.383394926 | 36.74209356 | 0.0544842 | ||||||
Tb927.5.2630 | hypothetical protein, conserved | 0 | Eq9 | 0.00462474 | 0.111247204 | 0.014846978 | 11.31847469 | 8.84427309 | 0.036752385 | ||||||
Tb927.5.2640 | hypothetical protein, conserved | 0 | Eq10 | 0.229370903 | 3.54668E-7 | 0.225113522 | 0.487198877 | 13.36201429 | 0.065590763 | ||||||
Tb927.5.2650 | L-galactonolactone oxidase (GAL/ALO) | Enzyme | Eq10 | 0.147048439 | 1.81442E-7 | 0.143353811 | 1.02975513 | 20.86709261 | 0.069079425 | ||||||
Tb927.5.2670 | hypothetical protein, conserved | 0 | Exponential | 0.044979923 | 0 | 0 | 22.23214137 | 15.4101491 | 0.058196472 | ||||||
Tb927.5.2680 | hypothetical protein, conserved | 0 | Eq9 | 0.010307223 | 0.084789536 | 0.014795816 | 17.84110182 | 15.75364351 | 0.048104859 | ||||||
Tb927.5.2690 | inositol-1(or 4)-monophosphatase 1, putative (IMPase 1) | Signalling | Eq9 | 5.94619E-4 | 0.074507691 | 0.006869698 | 14.46768844 | 10.38132906 | 0.048576445 | ||||||
Tb927.5.2700 | otubain, putative,otubain cysteine peptidase, Clan CA, family C65, putative | Protease or peptidase | Eq10 | 0.097806085 | 0 | 0.097113659 | 0.434818396 | 31.27778292 | 0.175572099 | ||||||
Tb927.5.2710 | hypothetical protein, conserved | 0 | Eq9 | 7.74244E-4 | 0.078233046 | 0.006905326 | 14.07620345 | 10.20963907 | 0.050496895 | ||||||
Tb927.5.2720 | zinc-finger protein ZPR1, putative | Zinc finger | Eq10 | 0.087427686 | 0 | 0.086810903 | 0.484730196 | 34.99051809 | 0.151705594 | ||||||
Tb927.5.2740 | hypothetical protein, conserved | 0 | Eq10 | 0.148454595 | 3.61733E-7 | 0.144537632 | 1.071530128 | 20.6729579 | 0.062921403 | ||||||
Tb927.5.2770 | hypothetical protein, conserved | 0 | Eq10 | 0.103518963 | 0 | 0.103336799 | 0.101903299 | 29.55950975 | 0.08101798 | ||||||
Tb927.5.2780 | mitochondrial DNA polymerase beta | Mitochondrial DNA | Eq10 | 0.054358378 | 2.02978E-7 | 0.051848888 | 5.138138579 | 56.6590476 | 0.172554412 | ||||||
Tb927.5.2800 | hypothetical protein, conserved | 0 | Exponential | 0.047937464 | 0 | 0 | 20.86051105 | 14.45940256 | 0.051720471 | ||||||
Tb927.5.2810 | hypothetical protein, conserved | 0 | Exponential | 0.05064185 | 0 | 0 | 19.74651407 | 13.68724108 | 0.069883072 | ||||||
Tb927.5.2830 | hypothetical protein, conserved | 0 | Eq9 | 0.005659765 | 0.115795607 | 0.033006681 | 9.645298485 | 7.020857334 | 0.008651839 | ||||||
Tb927.5.2840 | hypothetical protein, conserved | 0 | Eq9 | 0.114403621 | 1.137559743 | 0.027796169 | 4.086226048 | 17.91970968 | 0.067547345 | ||||||
Tb927.5.2850 | radial spoke protein RSP2, putative | Cytoskeleton | Eq10 | 0.071406354 | 2.54404E-7 | 0.068350096 | 3.624174216 | 43.10548067 | 0.202474991 | ||||||
Tb927.5.2860 | hypothetical protein, conserved | 0 | Eq10 | 0.213299928 | 7.95935E-7 | 0.202706268 | 1.40956897 | 14.44858789 | 0.030508785 | ||||||
Tb927.5.2880 | chaperone protein DNAj, putative | Chaperone | Exponential | 0.069419313 | 0 | 0 | 14.40521317 | 9.98493433 | 0.043230983 | ||||||
Tb927.5.2890 | hypothetical protein, conserved, P-loop NTP hydrolase domains, von Willebrand factor domain. | 0 | Eq10 | 0.18763411 | 2.0E-12 | 0.06496941 | 27.48305454 | 21.54225111 | 0.112123684 | ||||||
Tb927.5.2900 | histone deacetylase 4 (HDAC4) | Chromatin | Eq9 | 0.006388077 | 0.069740101 | 0.011323919 | 20.54590642 | 17.47431993 | 0.07069125 | ||||||
Tb927.5.2910 | hypothetical protein, copurifed with splicing complex | 0 | Eq9 | 3.16174E-4 | 0.083510073 | 0.003493697 | 13.00903179 | 9.376852512 | 0.06475362 | ||||||
Tb927.5.2920 | hypothetical protein, conserved | 0 | Eq9 | 0.001760819 | 0.047513101 | 0.005956581 | 26.29401097 | 20.45657873 | 0.077314834 | ||||||
Tb927.5.2930 | Mitochondrial ATP synthase subunit, putative | Mitochondrial pathway | Eq10 | 0.026933387 | 8.3031E-8 | 0.026194318 | 6.144038339 | 113.9660096 | 0.135490932 | ||||||
Tb927.5.2940 | stress-induced protein sti1, putative | Chaperone | Eq10 | 0.024975202 | 2.9934E-8 | 0.023793129 | 11.46552757 | 123.3524251 | 0.336528164 | ||||||
Tb927.5.2950 | CMF3, T. brucei components of motile flagella (TbCMF3) | Cytoskeleton | Eq10 | 0.101899098 | 2.15333E-6 | 0.101845453 | 0.032808846 | 32.37402678 | 0.088008596 | ||||||
Tb927.5.2960 | phosphoribosylpyrophosphate synthetase, putative (PRS) | Pentose phosphate pathway | Eq10 | 0.096846273 | 0 | 0.096558985 | 0.183851881 | 31.56920671 | 0.067341659 | ||||||
Tb927.5.2980 | hypothetical protein, conserved | 0 | Eq9 | 0.001556823 | 0.106771305 | 0.008599125 | 10.90247221 | 8.149087429 | 0.05919214 | ||||||
Tb927.5.2990 | hypothetical protein, conserved | 0 | Eq10 | 0.238417554 | 1.7E-11 | 0.053382664 | 30.81433197 | 20.53953409 | 0.04708 | ||||||
Tb927.5.3000 | hypothetical protein, conserved | 0 | Eq9 | 2.39866E-4 | 0.086585207 | 0.006215196 | 11.96190666 | 8.422758579 | 0.028483904 | ||||||
Tb927.5.3010 | MRB complex protein | Mitochondrial RNA | Eq10 | 0.164828887 | 6.41175E-7 | 0.160283193 | 1.009105235 | 18.62210512 | 0.065992916 | ||||||
Tb927.5.3020 | hypothetical protein, conserved | 0 | Eq9 | 0.035017373 | 4.329825889 | 0.02828423 | 0.512745313 | 3.803608418 | 0.031738058 | ||||||
Tb927.5.3030 | intraflagellar transport protein IFT122B | Cytoskeleton | Exponential | 0.027319761 | 0 | 0 | 36.60354197 | 25.3716445 | 0.155670541 | ||||||
Tb927.5.3040 | Cytochrome c Oxidase complex, MIX protein | Mitochondrial pathway | Eq10 | 0.090576411 | 0 | 0.088488212 | 1.533195911 | 33.86690855 | 0.074714696 | ||||||
Tb927.5.3050 | poly(ADP-ribose) polymerase, putative | Enzyme | Eq10 | 0.085512379 | 0 | 0.085396813 | 0.094506447 | 35.86943865 | 0.227748051 | ||||||
Tb927.5.3060 | hypothetical protein, conserved | 0 | Exponential | 0.064578671 | 0 | 0 | 15.48498878 | 10.73337793 | 0.063230128 | ||||||
Tb927.5.3070 | hypothetical protein, conserved | 0 | Eq10 | 0.12820324 | 4.00997E-7 | 0.124948304 | 1.193866888 | 23.93346548 | 0.076845641 | ||||||
Tb927.5.3080 | hypothetical protein, conserved | 0 | Eq9 | 0.100564739 | 2.195869359 | 0.032061924 | 1.801305109 | 13.42622995 | 0.058091626 | ||||||
Tb927.5.3090 | Mitochondrial ATP synthase subunit, putative | Mitochondrial pathway | Exponential | 0.003967799 | 0 | 0 | 252.0288751 | 174.69311 | 0.667307407 | ||||||
Tb927.5.310 | hypothetical protein | 0 | Eq10 | 0.181964697 | 3.6737E-8 | 0.178592511 | 0.613012141 | 16.84448004 | 0.059055605 | ||||||
Tb927.5.3120 | eIF2 beta | Translation | Eq10 | 0.024420205 | 1.86212E-7 | 0.023053344 | 13.89421205 | 126.3397765 | 0.334284776 | ||||||
Tb927.5.3140 | hypothetical protein, conserved | 0 | Eq10 | 0.10849802 | 0 | 0.072747399 | 19.71426884 | 30.48851252 | 0.053984673 | ||||||
Tb927.5.3150 | protein kinase , putative | Protein kinase | Eq10 | 0.217741624 | 9.6E-11 | 0.069741849 | 25.35402582 | 19.13816214 | 0.11266257 | ||||||
Tb927.5.3160 | protein kinase, putative | Protein kinase | Eq10 | 0.121101124 | 0 | 0.11739789 | 1.523046954 | 25.36387682 | 0.077365676 | ||||||
Tb927.5.3170 | ribose-phosphate pyrophosphokinase, putative (PRPS5) | Pentose phosphate pathway | Eq10 | 0.055192943 | 5.4368E-8 | 0.053781953 | 2.791635393 | 55.60036898 | 0.213091676 | ||||||
Tb927.5.3190 | hypothetical protein, conserved | 0 | Exponential | 0.079135751 | 0 | 0 | 12.63651374 | 8.758957386 | 0.034071922 | ||||||
Tb927.5.3200 | hypothetical protein, conserved | 0 | Exponential | 0.027669166 | 0 | 0 | 36.14131403 | 25.05125284 | 0.087368575 | ||||||
Tb927.5.3210 | small ubiquitin-related modifier, putative (TbSUMO) | Ubiquitin & proteasome | Eq10 | 0.022399331 | 1.13473E-7 | 0.021189797 | 14.60629602 | 137.6948905 | 0.327720016 | ||||||
Tb927.5.3220 | signal peptidase type I, putative | Vesicular transport | Eq10 | 0.070811205 | 3.59124E-7 | 0.067231135 | 4.323294605 | 43.52835417 | 0.195573539 | ||||||
Tb927.5.3230 | hypothetical protein, conserved | 0 | Exponential | 0.014148058 | 0 | 0 | 70.68107628 | 48.99239302 | 0.334779745 | ||||||
Tb927.5.3240 | hypothetical protein, conserved | 0 | Exponential | 0.014039765 | 0 | 0 | 71.22626271 | 49.37027693 | 0.362933198 | ||||||
Tb927.5.3250 | hypothetical protein, conserved, no clear yeast or human matches | 0 | Eq10 | 0.17556666 | 1.601E-9 | 0.041765148 | 39.95192248 | 27.07172155 | 0.100080462 | ||||||
Tb927.5.3280 | hypothetical protein, conserved, kineto-specific | 0 | Exponential | 0.028185015 | 0 | 0 | 35.47984686 | 24.59275961 | 0.193928249 | ||||||
Tb927.5.3290 | hypothetical protein, conserved | 0 | Exponential | 0.02047461 | 0 | 0 | 48.84097972 | 33.85399103 | 0.265057039 | ||||||
Tb927.5.3300 | hypothetical protein, conserved | Mitochondrial pathway | Eq10 | 0.059221364 | 1.74265E-7 | 0.054861333 | 7.558775726 | 52.27681875 | 0.301436296 | ||||||
Tb927.5.3310 | hypothetical protein, conserved | 0 | Eq10 | 0.26144521 | 2.0E-12 | 0.074677957 | 23.22778434 | 16.71828032 | 0.066286594 | ||||||
Tb927.5.3320 | protein kinase, putative | Protein kinase | Eq9 | 0.011633876 | 2.875036675 | 0.010800743 | 0.719561372 | 3.724944592 | 0.018668102 | ||||||
Tb927.5.3330 | hypothetical protein, conserved | 0 | Exponential | 0.014183883 | 0 | 0 | 70.50255578 | 48.86865377 | 0.335785287 | ||||||
Tb927.5.3340 | hypothetical protein, conserved | 0 | Eq10 | 0.06655048 | 2.3958E-7 | 0.063082107 | 4.742763209 | 46.33015394 | 0.205326597 | ||||||
Tb927.5.3350 | iron superoxide dismutase, putative | Mitochondrial pathway | Eq10 | 0.027630756 | 4.3223E-8 | 0.026696164 | 7.388912272 | 111.2235904 | 0.290583495 | ||||||
Tb927.5.3360 | Mitchondrial LSU ribosomal protein L2, putative | Mitochondrial translation | Eq10 | 0.183076675 | 2.75895E-7 | 0.182866444 | 0.037727805 | 16.70507669 | 0.037067005 | ||||||
Tb927.5.3370 | hypothetical protein | 0 | Exponential | 0.054322824 | 0 | 0 | 18.40846844 | 12.75978327 | 0.069300455 | ||||||
Tb927.5.340 | ESAG5-related protein, putative | ESAG | Eq10 | 0.039736905 | 1.64924E-7 | 0.037688899 | 7.854544127 | 77.58339643 | 0.203031298 | ||||||
Tb927.5.3400 | calcium-translocating P-type ATPase, calcium pump | Ion channel or pump | Exponential | 0.004220163 | 0 | 0 | 236.9576595 | 164.2465281 | 0.921148237 | ||||||
Tb927.5.3410 | Mitchondrial LSU ribosomal protein | Mitochondrial translation | Exponential | 0.056867005 | 0 | 0 | 17.58488936 | 12.18892336 | 0.030886967 | ||||||
Tb927.5.3430 | ubiquitin-activating enzyme e1, putative | Ubiquitin & proteasome | Exponential | 0.0339208 | 0 | 0 | 29.48043636 | 20.43427706 | 0.158992668 | ||||||
Tb927.5.3440 | hypothetical protein, conserved | 0 | Eq9 | 0.007783582 | 0.105827174 | 0.017726679 | 12.66683386 | 10.2754283 | 0.03946261 | ||||||
Tb927.5.3450 | hypothetical protein, conserved | 0 | Exponential | 0.01327065 | 0 | 0 | 75.35425812 | 52.23158598 | 0.49405571 | ||||||
Tb927.5.3460 | hypothetical protein, conserved | 0 | Eq10 | 0.394329871 | 4.21E-10 | 0.045362273 | 30.7299109 | 18.56847525 | 0.041377389 | ||||||
Tb927.5.3470 | hypothetical protein, conserved | 0 | Exponential | 0.024551865 | 0 | 0 | 40.73010384 | 28.23195219 | 0.05802345 | ||||||
Tb927.5.3490 | hypothetical protein, conserved | 0 | Eq9 | 4.12774E-5 | 0.077468368 | 0.001088146 | 13.39102608 | 9.438621998 | 0.067534384 | ||||||
Tb927.5.3500 | hypothetical protein, conserved | 0 | Eq9 | 0.004193505 | 0.036822819 | 0.013483562 | 31.96309586 | 23.79946947 | 0.048445594 | ||||||
Tb927.5.3510 | structural maintenance of chromosome 3 (SMC3) | Chromatin | Exponential | 0.005932341 | 0 | 0 | 168.5675314 | 116.8421102 | 0.413780031 |
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Gene | Method PC | Method BF | |||||||
Tb927.3.2230 | Eq10 | Eq10 | |||||||
Tb927.7.4260 | Eq10 | Eq10 | |||||||
Tb927.3.5330 | Eq10 | Eq10 | |||||||
Tb927.6.3340 | Eq10 | Eq10 | |||||||
Tb927.11.11030 | Eq10 | Eq10 | |||||||
Tb927.11.1440 | Eq10 | Eq10 | |||||||
Tb927.11.4050 | Eq10 | Eq10 | |||||||
Tb927.6.1270 | Eq10 | Eq10 | |||||||
Tb927.5.2860 | Eq10 | Eq10 | |||||||
Tb927.3.3360 | Eq10 | Eq10 | |||||||
Tb927.10.9400 | Eq10 | Eq10 | |||||||
Tb927.6.3210 | Eq10 | Eq10 | |||||||
Tb927.8.5230 | Eq10 | Eq10 | |||||||
Tb927.10.5790 | Eq10 | Eq10 | |||||||
Tb927.10.15430 | Eq10 | Eq10 | |||||||
Tb927.10.7140 | Eq10 | Eq10 | |||||||
Tb927.10.730 | Eq10 | Eq10 | |||||||
Tb927.10.8800 | Eq10 | Eq10 | |||||||
Tb927.10.12980 | Eq10 | Eq10 | |||||||
Tb927.3.1390 | Eq10 | Eq10 | |||||||
Tb927.10.4230 | Eq10 | Eq10 | |||||||
Tb927.4.2170 | Eq10 | Eq10 | |||||||
Tb927.5.4410 | Eq10 | Eq10 | |||||||
Tb927.9.13770 | Eq10 | Eq10 | |||||||
Tb927.9.15490 | Eq10 | Eq10 | |||||||
Tb927.8.6780 | Eq10 | Eq10 | |||||||
Tb927.7.1330 | Eq10 | Eq10 | |||||||
Tb927.10.3620 | Eq10 | Eq10 | |||||||
Tb927.7.2270 | Eq10 | Eq10 | |||||||
Tb927.11.11510 | Eq10 | Eq10 | |||||||
Tb927.9.8550 | Eq10 | Eq10 | |||||||
Tb927.7.5740 | Eq10 | Eq10 | |||||||
Tb927.5.310 | Eq10 | Eq10 | |||||||
Tb927.11.8260 | Eq10 | Eq10 | |||||||
Tb927.11.710 | Eq10 | Eq10 | |||||||
Tb927.9.11700 | Eq10 | Eq10 | |||||||
Tb927.7.4710 | Eq10 | Eq10 | |||||||
Tb927.1.990 | Eq10 | Eq10 | |||||||
Tb927.11.11720 | Eq10 | Eq10 | |||||||
Tb927.11.11670 | Eq10 | Eq10 | |||||||
Tb927.11.7310 | Eq10 | Eq10 | |||||||
Tb927.11.15220 | Eq10 | Eq10 | |||||||
Tb927.11.1730 | Eq10 | Eq10 | |||||||
Tb927.6.1410 | Eq10 | Eq10 | |||||||
Tb927.11.3790 | Eq10 | Eq10 | |||||||
Tb927.11.13130 | Eq10 | Eq10 | |||||||
Tb927.10.1430 | Eq10 | Eq10 | |||||||
Tb927.11.11660 | Eq10 | Eq10 | |||||||
Tb927.10.7740 | Eq10 | Eq10 | |||||||
Tb927.10.1230 | Eq10 | Eq10 | |||||||
Tb927.10.9180 | Eq10 | Eq10 | |||||||
Tb927.10.3470 | Eq10 | Eq10 | |||||||
Tb927.5.550 | Eq10 | Eq10 | |||||||
Tb927.10.4510 | Eq10 | Eq10 | |||||||
Tb927.11.15760 | Eq10 | Eq10 | |||||||
Tb927.5.1020 | Eq10 | Eq10 | |||||||
Tb927.10.8690 | Eq10 | Eq10 | |||||||
Tb927.9.15050 | Eq10 | Eq10 | |||||||
Tb927.3.5320 | Eq10 | Eq10 | |||||||
Tb927.7.1360 | Eq10 | Eq10 | |||||||
Tb927.3.3260 | Eq10 | Eq10 | |||||||
Tb927.10.15240 | Eq10 | Eq10 | |||||||
Tb927.11.15400 | Eq10 | Eq10 | |||||||
Tb927.6.4080 | Eq10 | Eq10 | |||||||
Tb927.11.14900 | Eq10 | Eq10 | |||||||
Tb927.10.15940 | Eq10 | Eq10 | |||||||
Tb927.10.8400 | Eq10 | Eq10 | |||||||
Tb927.9.1500 | Eq10 | Eq10 | |||||||
Tb927.6.4520 | Eq10 | Eq10 | |||||||
Tb927.11.250 | Eq10 | Eq10 | |||||||
Tb927.7.2260 | Eq10 | Eq10 | |||||||
Tb927.10.15000 | Eq10 | Eq10 | |||||||
Tb927.5.3460 | Eq10 | Eq10 | |||||||
Tb927.10.6870 | Eq10 | Eq10 | |||||||
Tb927.9.5260 | Eq10 | Eq10 | |||||||
Tb927.8.3430 | Eq10 | Eq10 | |||||||
Tb927.10.350 | Eq10 | Eq10 | |||||||
Tb927.8.1100 | Eq10 | Eq10 | |||||||
Tb927.5.3710 | Eq10 | Eq10 | |||||||
Tb927.11.2330 | Eq10 | Eq10 | |||||||
Tb927.7.1170 | Eq10 | Eq10 | |||||||
Tb927.1.3260 | Eq10 | Eq10 | |||||||
Tb927.10.1960 | Eq10 | Eq10 | |||||||
Tb927.11.12500 | Eq10 | Eq10 | |||||||
Tb927.11.10610 | Eq10 | Eq10 | |||||||
Tb927.11.15430 | Eq10 | Eq10 | |||||||
Tb927.6.3540 | Eq10 | Eq10 | |||||||
Tb927.6.3890 | Eq10 | Eq10 | |||||||
Tb927.11.7370 | Eq10 | Eq10 | |||||||
Tb927.2.3480 | Eq10 | Eq10 | |||||||
Tb927.6.3000 | Eq10 | Eq10 | |||||||
Tb927.6.1230 | Eq10 | Eq10 | |||||||
Tb927.11.13200 | Eq10 | Eq10 | |||||||
Tb927.8.5510 | Eq10 | Eq10 | |||||||
Tb927.9.10470 | Eq10 | Eq10 | |||||||
Tb927.10.3590 | Eq10 | Eq10 | |||||||
Tb927.6.1830 | Eq10 | Eq10 | |||||||
Tb927.2.5150 | Eq10 | Eq10 | |||||||
Tb927.10.9130 | Eq10 | Eq10 |