Selected Cell
Cell:
Value:
metadata
BF HL
PC HL
switching method
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Decay models published in Deneke et al. were used to fit the decay data of mRNA and calculate half-lives (HL) | |||||||||
BF =bloodform | |||||||||
PC =procyclic | |||||||||
Eq9 = fast-to-slow decay | |||||||||
Eq10 = slow-to-fast decay | |||||||||
lambda = rate of transition between states | |||||||||
mu = rate of degradation | |||||||||
nu = rate of initial degradation | |||||||||
U = transcript lifetime | |||||||||
Error = least squares | |||||||||
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Gene | Description | Class | Method | lambda | mu | nu | U | Half-life | Error |
Tb11.02.5105 | POMP15 | Mitochondrial membrane | Eq9 | 5.26617E-4 | 0.123244291 | 0.005673454 | 8.829387307 | 6.369142532 | 0.115963143 |
Tb11.02.5360 | hypothetical protein, conserved | 0 | Eq9 | 0.004019246 | 0.175774495 | 0.007842417 | 8.412423062 | 7.552442551 | 0.060071011 |
Tb11.02.5370 | hypothetical protein, conserved | 0 | Eq9 | 0.003315379 | 0.131873533 | 0.006356238 | 11.25532064 | 10.13274193 | 0.146500316 |
Tb11.02.5380 | RRP44 | RNA degradation | Eq9 | 4.6989E-4 | 0.089878778 | 0.003310893 | 12.63906385 | 9.329805374 | 0.057657916 |
Tb11.02.5390 | MRB complex protein | Mitochondrial RNA | Exponential | 0.078149193 | 0 | 0 | 12.79603743 | 8.869543076 | 0.080184984 |
Tb11.02.5400 | cystathionine beta-synthase, putative | Amino acid metabolism | Eq9 | 0.002056443 | 0.184243038 | 0.007079225 | 6.92696406 | 5.499887466 | 0.061057943 |
Tb11.02.5430 | hypothetical protein, conserved | 0 | Eq9 | 1.53965E-4 | 0.079748147 | 5.57738E-4 | 15.97019446 | 12.69282341 | 0.128357989 |
Tb11.02.5440 | hypothetical protein, conserved | 0 | Eq9 | 0.005648236 | 0.182520238 | 0.013482816 | 7.540695004 | 6.312589645 | 0.09790524 |
Tb927.1.1000 | developmentally regulated phosphoprotein (dr6) | Mitochondrial pathway | Eq9 | 6.13091E-4 | 0.135448817 | 0.005335703 | 8.194089442 | 5.972490311 | 0.0385342 |
Tb927.1.1010 | hypothetical protein, conserved | 0 | Eq9 | 0.008093727 | 0.132915333 | 0.010154909 | 12.7440468 | 13.14595222 | 0.102422156 |
Tb927.1.1020 | hypothetical protein, conserved | 0 | Exponential | 0.050907647 | 0 | 0 | 19.64341414 | 13.61577034 | 0.100589356 |
Tb927.1.1030 | leucine-rich repeat protein (LRRP) | LRRP | Eq9 | 0.001398187 | 0.103768698 | 0.010281853 | 10.80174542 | 7.90520668 | 0.041324878 |
Tb927.1.1040 | hypothetical protein, conserved | 0 | Eq9 | 0.045878661 | 0.479297331 | 0.036063073 | 4.326508423 | 6.048574448 | 0.033703879 |
Tb927.1.1050 | hypothetical protein, conserved | 0 | Eq9 | 0.004021964 | 0.103007674 | 0.011008577 | 12.75673017 | 10.27554512 | 0.036915422 |
Tb927.1.1060 | hypothetical protein, conserved, PCNA superfamily with putative DNA-binding site, low match to yeast Rad17 | 0 | Eq9 | 0.014350793 | 0.172571595 | 0.022857755 | 8.708589633 | 7.742605209 | 0.074486134 |
Tb927.1.1080 | TFIIH basal transcription factor subunit (TSP1) | RNA synthesis | Eq9 | 0.00348519 | 0.121617184 | 0.015618672 | 9.77713286 | 7.384328842 | 0.079758087 |
Tb927.1.1100 | hypothetical protein, conserved, myosin-like | 0 | Eq9 | 0.002998155 | 0.099783266 | 0.01199317 | 12.16161951 | 9.298315048 | 0.033233016 |
Tb927.1.1120 | hypothetical protein, conserved | 0 | Exponential | 0.07729216 | 0 | 0 | 12.93792283 | 8.967885971 | 0.10361782 |
Tb927.1.1130 | glycerol-3-phosphate dehydrogenase (FAD-dependent), putative | Glucose & glycerol | Eq9 | 0.066292406 | 40.67786428 | 0.017755681 | 0.116178341 | 25.69708824 | 0.090062796 |
Tb927.1.1140 | hypothetical protein, conserved | 0 | Eq9 | 0.018165592 | 7.11016547 | 0.021086628 | 0.261137489 | 0.366125107 | 0.068528049 |
Tb927.1.1150 | zeta tubulin | Cytoskeleton | Eq9 | 0.018247569 | 74.08433222 | 0.021352718 | 0.025027176 | 0.035295486 | 0.122689996 |
Tb927.1.1160 | PPR3 | Mitochondrial translation | Eq9 | 0.030727573 | 8.62174173 | 0.027172366 | 0.246269473 | 2.308835983 | 0.057672543 |
Tb927.1.1200 | Mitchondrial SSU ribosomal protein | Mitochondrial translation | Eq9 | 0.005248924 | 0.131733513 | 0.021641825 | 9.070769403 | 6.85997963 | 0.051809109 |
Tb927.1.1220 | hypothetical protein, conserved | 0 | Eq9 | 0.020956007 | 0.159371396 | 0.024950776 | 10.20307501 | 9.608392715 | 0.055913645 |
Tb927.1.1230 | chaperone protein DNAj, putative | Chaperone | Eq9 | 0.022851205 | 0.370012819 | 0.021295529 | 5.276766598 | 7.020196915 | 0.125560179 |
Tb927.1.1240 | CTP synthase | Nucleotides | Eq10 | 0.074160075 | 7.186E-8 | 0.071569853 | 2.843146112 | 41.44901991 | 0.086234342 |
Tb927.1.1270 | homocysteine S-methyltransferase, putative | Amino acid metabolism | Exponential | 0.046749379 | 0 | 0 | 21.39065858 | 14.8268795 | 0.100384232 |
Tb927.1.1300 | hypothetical protein, conserved | 0 | Eq9 | 0.067699377 | 0.386298771 | 0.089811607 | 3.862996327 | 3.325872421 | 0.039770465 |
Tb927.1.1310 | hypothetical protein, conserved | 0 | Exponential | 0.103812587 | 0 | 0 | 9.632743324 | 6.676912308 | 0.051731812 |
Tb927.1.1330 | Mitochondrial Editosome-like Complex TUTase (MEAT1) | Mitochondrial RNA | Eq9 | 1.21037E-4 | 0.147141817 | 0.003073245 | 7.058018508 | 4.977254868 | 0.039408173 |
Tb927.1.1340 | FG-GAP repeat protein, putative,intergrin alpha chain protein, putative | Cytoskeleton | Eq9 | 0.003020637 | 0.136442429 | 0.015409099 | 8.575958245 | 6.422109604 | 0.02581624 |
Tb927.1.1350 | kinesin heavy chain, putative | Cytoskeleton | Eq9 | 0.001601277 | 0.10930983 | 0.007781759 | 10.87152782 | 8.226747513 | 0.060095355 |
Tb927.1.1370 | rRNA biogenesis protein, putative | rRNA tRNA processing | Eq10 | 0.432916136 | 1.4E-11 | 0.082149258 | 19.22100507 | 12.34148979 | 0.053209773 |
Tb927.1.1380 | serine/threonine protein phosphatase 2A regulatory subunit, putative | Protein kinase | Eq10 | 0.440408306 | 8.0E-12 | 0.066106057 | 22.50556739 | 13.92418861 | 0.088813592 |
Tb927.1.1390 | hypothetical protein, conserved | 0 | Exponential | 0.063883946 | 0 | 0 | 15.65338488 | 10.85009575 | 0.133786204 |
Tb927.1.1400 | hypothetical protein, conserved | 0 | Exponential | 0.074193381 | 0 | 0 | 13.47829123 | 9.342432022 | 0.127488266 |
Tb927.1.1420 | hypothetical protein, conserved | 0 | Exponential | 0.05125436 | 0 | 0 | 19.51053518 | 13.52366447 | 0.093674969 |
Tb927.1.1500 | hypothetical protein, conserved | 0 | Eq10 | 0.063314134 | 7.149E-9 | 0.062181786 | 1.700025143 | 48.4058404 | 0.161773598 |
Tb927.1.1530 | protein kinase, putative | Protein kinase | Exponential | 0.071032879 | 0 | 0 | 14.07798778 | 9.758119583 | 0.045907288 |
Tb927.1.1540 | hypothetical protein, conserved | 0 | Eq10 | 0.75477809 | 0 | 0.106241301 | 13.77965783 | 8.462915421 | 0.080946742 |
Tb927.1.1550 | tubulin-tyrosine ligase, putative | Cytoskeleton | Eq10 | 0.416412984 | 3.04E-10 | 0.085950159 | 18.76211667 | 12.26218224 | 0.083834285 |
Tb927.1.1560 | vesicular-fusion protein nsf, putative,N-ethylmaleimide sensitive factor (NsF) | Vesicular transport | Eq9 | 7.86479E-4 | 0.088326524 | 0.006533569 | 12.57252025 | 9.160757065 | 0.055012918 |
Tb927.1.1600 | hypothetical protein, conserved | 0 | Eq9 | 0.002070686 | 0.085920747 | 0.010768685 | 13.55004351 | 10.11439323 | 0.035272665 |
Tb927.1.1610 | hypothetical protein, conserved | 0 | Eq9 | 0.024788576 | 0.27276764 | 0.039989755 | 5.443923146 | 4.774637222 | 0.059495867 |
Tb927.1.1620 | ATP-dependent DEAD/H RNA helicase, putative, no clear yeast homologue | RNA helicase | Eq9 | 3.44084E-5 | 0.06453995 | 6.18727E-4 | 16.3472254 | 11.61629677 | 0.071618049 |
Tb927.1.1630 | hypothetical protein, conserved | 0 | Eq9 | 2.95578E-4 | 0.101698146 | 0.00317111 | 10.71840218 | 7.740182877 | 0.051840568 |
Tb927.1.1640 | hypothetical protein, conserved | 0 | Eq9 | 0.020193964 | 0.64508993 | 0.024780623 | 2.728022575 | 3.095426559 | 0.056763259 |
Tb927.1.1660 | hypothetical protein, conserved | 0 | Eq9 | 0.01185005 | 0.168189195 | 0.019667722 | 8.900906962 | 7.922239304 | 0.065213864 |
Tb927.1.1670 | hypothetical protein, conserved | 0 | Eq10 | 0.176693869 | 2.62515E-7 | 0.170309232 | 1.234832528 | 17.40000725 | 0.191131968 |
Tb927.1.1680 | hypothetical protein, conserved | 0 | Eq9 | 7.53716E-4 | 0.134280314 | 0.006239122 | 8.300165723 | 6.06253624 | 0.05533899 |
Tb927.1.1690 | RNA editing endoribonuclease (KREN1) | Mitochondrial RNA | Eq9 | 0.004884406 | 0.118749913 | 0.011485579 | 11.5280631 | 9.578485489 | 0.103353432 |
Tb927.1.1700 | hypothetical protein, conserved | 0 | Exponential | 0.027480967 | 0 | 0 | 36.38882088 | 25.22280693 | 0.140861048 |
Tb927.1.1710 | hypothetical protein, conserved | 0 | Eq10 | 0.092148727 | 0 | 0.089925279 | 1.577558785 | 33.29527617 | 0.224110813 |
Tb927.1.1720 | hypothetical protein, conserved | 0 | Eq9 | 0.017215084 | 6.760676151 | 0.023408721 | 0.256040296 | 0.295248032 | 0.083569195 |
Tb927.1.1730 | hypothetical protein, conserved | 0 | Eq9 | 2.45628E-4 | 0.065998483 | 0.002301604 | 16.70669772 | 12.13599205 | 0.083698669 |
Tb927.1.1750 | hypothetical protein, conserved | 0 | Exponential | 0.029387449 | 0 | 0 | 34.0281318 | 23.58651161 | 0.153552483 |
Tb927.1.1790 | hypothetical protein | 0 | Exponential | 0.103257544 | 0 | 0 | 9.684522404 | 6.712808609 | 0.101734364 |
Tb927.1.1820 | hypothetical protein, conserved | 0 | Exponential | 0.0885198 | 0 | 0 | 11.29690756 | 7.83041954 | 0.054418168 |
Tb927.1.1840 | hypothetical protein, conserved | 0 | Eq9 | 0.001176622 | 0.105590486 | 0.006836839 | 10.97810321 | 8.190069199 | 0.064184917 |
Tb927.1.1850 | hypothetical protein, conserved | 0 | Exponential | 0.065693405 | 0 | 0 | 15.22222816 | 10.55125237 | 0.093727241 |
Tb927.1.1880 | hypothetical protein, conserved | 0 | Eq9 | 0.020389391 | 0.214891099 | 0.026613352 | 7.506503801 | 7.130861282 | 0.072812112 |
Tb927.1.1890 | hypothetical protein, conserved | 0 | Eq9 | 0.078443034 | 0.567368102 | 0.018370358 | 8.160415644 | 27.84878731 | 0.102283256 |
Tb927.1.1910 | hypothetical protein, conserved | 0 | Eq9 | 0.006637384 | 0.133948659 | 0.014551054 | 10.35767519 | 8.679265976 | 0.054379885 |
Tb927.1.1920 | hypothetical protein, conserved | 0 | Eq9 | 0.03782731 | 0.245380824 | 0.026168739 | 8.635045841 | 11.22584343 | 0.060280186 |
Tb927.1.1930 | TbTOR4 = TOR-like 2 | Signalling | Exponential | 0.028522647 | 0 | 0 | 35.05985961 | 24.30163383 | 0.176184612 |
Tb927.1.1960 | chaperone protein DNAj, putative | Chaperone | Eq10 | 0.276878643 | 0 | 0.275336968 | 0.120772772 | 11.04594231 | 0.053556315 |
Tb927.1.1980 | hypothetical protein, conserved | 0 | Eq10 | 0.47631374 | 3.82272E-7 | 0.468255596 | 0.21375379 | 6.432981491 | 0.070387982 |
Tb927.1.1990 | hypothetical protein, conserved | 0 | Eq10 | 1.114019303 | 1.3E-11 | 0.261123919 | 6.368163924 | 4.297208786 | 0.017868104 |
Tb927.1.2110 | calpain-like cysteine peptidase, putative,cysteine peptidase, Clan CA, family C2, putative | Protease or peptidase | Eq9 | 0.008315175 | 0.255051397 | 0.008193447 | 7.650389098 | 11.14460945 | 0.136703513 |
Tb927.1.2120 | calpain, putative,cysteine peptidase, Clan CA, family C2, putative | Protease or peptidase | Eq9 | 3.12337E-4 | 0.079503496 | 0.002767525 | 13.94282347 | 10.15675545 | 0.059393322 |
Tb927.1.2190 | RAPTOR-like (TOR complexes) | Signalling | Exponential | 0.068126273 | 0 | 0 | 14.67862475 | 10.17445564 | 0.094238487 |
Tb927.1.2210 | hypothetical protein, conserved | 0 | Eq10 | 0.336158665 | 0.007476488 | 0.100494978 | 16.77157698 | 12.06332207 | 0.053697844 |
Tb927.1.2320 | hypothetical protein, conserved | 0 | Eq9 | 0.006641823 | 0.301538729 | 0.027920766 | 4.016739894 | 3.071603775 | 0.040051367 |
Tb927.1.2330 | beta tubulin | Cytoskeleton | Eq10 | 0.046707193 | 8.8113E-8 | 0.044895083 | 5.018209255 | 65.85524797 | 0.429684988 |
Tb927.1.2340 | alpha tubulin | Cytoskeleton | Eq10 | 0.040001409 | 2.3455E-7 | 0.037396542 | 9.883706959 | 77.26486444 | 0.374199398 |
Tb927.1.2430 | histone H3 | Chromatin | Eq10 | 0.05080012 | 1.0375E-7 | 0.048717453 | 4.87747673 | 60.5732131 | 0.270430141 |
Tb927.1.2570 | coatomer beta subunit (beta-coP) | Vesicular transport | Eq10 | 0.191657196 | 2.77493E-7 | 0.186799155 | 0.797119487 | 16.0106945 | 0.066919031 |
Tb927.1.2580 | EAP1 exosome complex PH subunit | RNA degradation | Eq10 | 0.18701422 | 1.06972E-6 | 0.172464459 | 2.53173328 | 16.56704903 | 0.139427862 |
Tb927.1.2600 | PUF9 | RNA binding | Eq10 | 0.039248544 | 3.1415E-8 | 0.037218152 | 7.980615047 | 78.55767488 | 0.338663053 |
Tb927.1.2640 | hypothetical protein, conserved | 0 | Exponential | 0.071445691 | 0 | 0 | 13.99664538 | 9.701738358 | 0.125855988 |
Tb927.1.2670 | flagellar protein PF16 | Cytoskeleton | Eq10 | 0.119045816 | 0 | 0.116213119 | 1.204159007 | 25.7710743 | 0.111515226 |
Tb927.1.2700 | hypothetical protein, conserved | 0 | Eq9 | 0.015170451 | 0.140391675 | 0.02513971 | 10.30743 | 8.799543381 | 0.067717886 |
Tb927.1.2710 | hypothetical protein, conserved | 0 | Eq9 | 0.003933743 | 0.131418985 | 0.017336397 | 9.064513206 | 6.852331161 | 0.065348819 |
Tb927.1.2730 | hypothetical protein, conserved | 0 | Exponential | 0.055179065 | 0 | 0 | 18.12281522 | 12.56176949 | 0.101015402 |
Tb927.1.2740 | lipase-like protein, putative | Lipids & fatty acids | Eq9 | 3.68176E-4 | 0.084343811 | 0.003085451 | 13.21331915 | 9.652566910000001 | 0.118343656 |
Tb927.1.2750 | hypothetical protein, conserved | 0 | Eq10 | 0.149942191 | 9.7423E-8 | 0.144805657 | 1.378988822 | 20.49807549 | 0.067396507 |
Tb927.1.2770 | hypothetical protein, conserved | 0 | Eq9 | 0.003452529 | 0.345579633 | 0.009672691 | 3.887709747 | 3.212175369 | 0.08719193 |
Tb927.1.2820 | pteridine transporter, putative | Folate | Eq9 | 4.48481E-4 | 0.066661854 | 0.003774602 | 16.67128441 | 12.15596199 | 0.079462099 |
Tb927.1.2970 | hypothetical protein, conserved | 0 | Eq9 | 0.00153286 | 0.159016668 | 0.017116445 | 6.786409374 | 4.871397018 | 0.060952926 |
Tb927.1.2980 | hypothetical protein, conserved | 0 | Eq9 | 0.01639451 | 0.299711991 | 0.021301126 | 5.598286046 | 5.729513168 | 0.043763578 |
Tb927.1.2985 | hypothetical protein, conserved | 0 | Eq9 | 0.062961419 | 0.190847516 | 0.040409702 | 10.07874993 | 10.21672249 | 0.069010835 |
Tb927.1.2990 | PPR2 | Mitochondrial translation | Eq9 | 0.012560093 | 0.176567958 | 0.013891607 | 10.06804508 | 11.04180336 | 0.085991034 |
Tb927.1.3000 | aminoacylase, putative,N-acyl-L-amino acid amidohydrolase, putative | Amino acid metabolism | Eq9 | 0.002774612 | 0.097715171 | 0.01274512 | 12.1176496 | 9.129476547 | 0.079702621 |
Tb927.1.3010 | mRNA processing protein, putative | Mitochondrial RNA | Eq9 | 0.021435246 | 0.135803074 | 0.013065521 | 16.79359323 | 24.3448925 | 0.164380739 |
Tb927.1.3030 | KREL2 | Mitochondrial RNA | Eq9 | 0.003730518 | 0.0792747 | 0.014299595 | 15.19040384 | 11.53012276 | 0.130472165 |
Tb927.1.3040 | hypothetical protein, conserved | 0 | Exponential | 0.044927441 | 0 | 0 | 22.25811148 | 15.42815208 | 0.093356917 |
Tb927.1.3050 | hypothetical protein, conserved | 0 | Eq10 | 0.232237485 | 0 | 0.094312126 | 19.08358865 | 16.43174171 | 0.09515385 |
Tb927.1.3070 | hypothetical protein, conserved, poly(Q), poly(H) | 0 | Exponential | 0.026069203 | 0 | 0 | 38.35943885 | 26.58873558 | 0.239344968 |
Tb927.1.3110 | soluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative | Vesicular transport | Eq10 | 0.329418309 | 0 | 0.153197773 | 11.61138909 | 11.08483315 | 0.059356263 |
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2110
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2161
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2200
Tb927.11.3180 | hypothetical protein, conserved | 0 | Eq9 | 0.001552884 | 0.192984922 | 0.009555924 | 5.975727264 | 4.447095394 | 0.025197661 | ||||||
Tb927.11.3190 | hypothetical protein, conserved, LIS homology & WD40 repeat region matches a human HIV BPR binding protein | 0 | Exponential | 0.016875341 | 0 | 0 | 59.25806192 | 41.07455492 | 0.21112201 | ||||||
Tb927.11.320 | Potential LC8 homologue (dynein light chain associated to multiple functions in other species such as flagellum beating and formation) | Cytoskeleton | Eq10 | 0.093039382 | 0 | 0.092827024 | 0.147208417 | 32.86585093 | 0.161283408 | ||||||
Tb927.11.3200 | hypothetical protein, conserved | 0 | Eq9 | 0.003307978 | 0.06743816 | 0.009122991 | 19.26038653 | 15.35158396 | 0.086866182 | ||||||
Tb927.11.3220 | metacaspase, (MCA1) | Protease or peptidase | Exponential | 0.046011214 | 0 | 0 | 21.7338319 | 15.0647378 | 0.030604122 | ||||||
Tb927.11.3230 | 60S ribosomal protein L44 | Ribosome | Exponential | 3.97707E-4 | 0 | 0 | 2514.414574 | -1 | 0.612018269 | ||||||
Tb927.11.3240 | T-complex protein 1, zeta subunit, putative (TCP-1-zeta) | Translation | Eq10 | 0.029117833 | 1.48736E-7 | 0.027580948 | 10.9805059 | 105.8996987 | 0.267442404 | ||||||
Tb927.11.3250 | dynein heavy chain, putative | Cytoskeleton | Exponential | 0.005222203 | 0 | 0 | 191.490065 | 132.7308011 | 1.041348734 | ||||||
Tb927.11.3260 | mitochondrial DNA polymerase I protein D, putative (POLID) | Mitochondrial DNA | Exponential | 0.018078224 | 0 | 0 | 55.31516666 | 38.34154844 | 0.307760369 | ||||||
Tb927.11.3270 | squalene monooxygenase, putative | Sterols | Eq10 | 0.054679533 | 2.1126E-7 | 0.054642608 | 0.062339841 | 65.12686014 | 0.166219239 | ||||||
Tb927.11.3280 | kinesin, MCAK-like KIF13-5 | Cytoskeleton | Eq10 | 0.170319947 | 2.65E-10 | 0.061590875 | 29.1055189 | 23.34848642 | 0.105341019 | ||||||
Tb927.11.330 | Nucleoporin (TbMlp-1) | Nucleo-cytoplasmic transport | Eq10 | 0.223580259 | 1.96E-10 | 0.10055958 | 17.77667512 | 16.5039897 | 0.080122375 | ||||||
Tb927.11.3300 | hypothetical protein, conserved, HA tagged is in mitochondrion, poly(Q), rich in E, K. | 0 | Exponential | 0.01219015 | 0 | 0 | 82.03344734 | 56.8612504 | 0.393599096 | ||||||
Tb927.11.3310 | ubiquitin-conjugating enzyme, putative, | Ubiquitin & proteasome | Eq10 | 0.033279583 | 1.35024E-7 | 0.033204143 | 0.411224022 | 91.71471834 | 0.31753606 | ||||||
Tb927.11.3320 | ras-like small GTPase, putative (TbGTR) | Signalling | Eq9 | 3.34682E-4 | 0.110191006 | 0.008116351 | 9.420755424 | 6.640369892 | 0.029109779 | ||||||
Tb927.11.3330 | hypothetical protein, conserved, no yeast or human match | 0 | Eq9 | 3.76368E-4 | 0.065376954 | 0.004863838 | 16.38519423 | 11.7233777 | 0.050732303 | ||||||
Tb927.11.3340 | RBP34 | RNA binding | Eq10 | 0.222567447 | 4.61528E-7 | 0.215452681 | 0.866692884 | 13.80305529 | 0.080525047 | ||||||
Tb927.11.3350 | phospholipid-transporting ATPase 1-like protein, putative | Lipids & fatty acids | Exponential | 0.028089584 | 0 | 0 | 35.60038521 | 24.67630148 | 0.114289571 | ||||||
Tb927.11.3360 | CMF22, T. brucei components of motile flagella (TbCMF22) | Cytoskeleton | Eq10 | 0.144932666 | 7.0E-12 | 0.079875052 | 21.10566652 | 23.98201704 | 0.14692722 | ||||||
Tb927.11.3380 | Ran-binding protein 1, putative | Nucleo-cytoplasmic transport | Eq10 | 0.054743083 | 4.07198E-7 | 0.051122469 | 7.337058092 | 56.46767378 | 0.073761116 | ||||||
Tb927.11.3390 | hypothetical protein, conserved, HECT E3 ligase at C-terminus | Ubiquitin & proteasome | Exponential | 0.020236204 | 0 | 0 | 49.41638215 | 34.25283194 | 0.241503306 | ||||||
Tb927.11.340 | hypothetical protein, conserved | 0 | Eq9 | 3.56607E-5 | 0.061023401 | 0.001547128 | 16.75508267 | 11.73001528 | 0.029054261 | ||||||
Tb927.11.3400 | hypothetical protein, conserved | 0 | Eq10 | 0.208390649 | 1.0E-12 | 0.066957742 | 26.42022244 | 19.97164965 | 0.077147947 | ||||||
Tb927.11.3410 | hypothetical protein, conserved | 0 | Eq9 | 0.001178924 | 0.078238438 | 0.008964574 | 14.24763019 | 10.394032 | 0.05476983 | ||||||
Tb927.11.3420 | leucine-rich repeat protein (LRRP) | LRRP | Eq9 | 0.005979178 | 2.88667324 | 0.014588959 | 0.487387507 | 0.420691967 | 0.038010655 | ||||||
Tb927.11.3430 | hypothetical protein, conserved | 0 | Eq10 | 0.182797431 | 4.00176E-7 | 0.179288238 | 0.632412129 | 16.76764727 | 0.062509731 | ||||||
Tb927.11.3440 | hypothetical protein, conserved, no domains | 0 | Exponential | 0.025945509 | 0 | 0 | 38.54231635 | 26.71549559 | 0.101051532 | ||||||
Tb927.11.3450 | hypothetical protein, conserved | 0 | Eq10 | 0.2962007 | 3.1E-11 | 0.046914251 | 32.14620372 | 20.02925634 | 0.028699259 | ||||||
Tb927.11.3460 | hypothetical protein, conserved | 0 | Eq9 | 0.245001834 | 0.98611998 | 0.052267866 | 4.619711419 | 10.3918004 | 0.011391682 | ||||||
Tb927.11.3480 | hypothetical protein, conserved | 0 | Eq10 | 0.138729103 | 5.67223E-7 | 0.131433246 | 2.296143058 | 22.22699404 | 0.106902967 | ||||||
Tb927.11.3490 | hypothetical protein, conserved, no domains, no good BLASTp matches | 0 | Eq10 | 0.073741473 | 3.52595E-7 | 0.070296636 | 3.833288138 | 41.76921129 | 0.244713815 | ||||||
Tb927.11.350 | hypothetical protein, conserved | 0 | Exponential | 0.024713402 | 0 | 0 | 40.46387431 | 28.04741621 | 0.06617275 | ||||||
Tb927.11.3500 | hypothetical protein, conserved | 0 | Exponential | 0.021845594 | 0 | 0 | 45.77582083 | 31.72938108 | 0.264946284 | ||||||
Tb927.11.3510 | hypothetical protein, conserved | 0 | Eq10 | 0.248421884 | 2.7E-11 | 0.084149366 | 21.1675206 | 16.40867472 | 0.090304185 | ||||||
Tb927.11.3520 | hypothetical protein, conserved | 0 | Eq9 | 6.00493E-5 | 0.077607901 | 0.002025397 | 13.25705317 | 9.307758808 | 0.033893535 | ||||||
Tb927.11.3530 | hypothetical protein, conserved | 0 | Eq10 | 0.152645882 | 0 | 0.146800279 | 1.515246069 | 20.14999151 | 0.060520356 | ||||||
Tb927.11.3540 | hypothetical protein, conserved | 0 | Eq9 | 9.62827E-4 | 0.149703734 | 0.015730962 | 7.043406464 | 5.000059605 | 0.006559337 | ||||||
Tb927.11.3570 | aminopeptidase, putative,metallo-peptidase, Clan MA(E) Family M1 | Protease or peptidase | Eq10 | 0.04464291 | 2.42576E-7 | 0.041987998 | 8.079290412 | 69.158113 | 0.328935166 | ||||||
Tb927.11.3580 | hypothetical protein, conserved | 0 | Exponential | 0.032713228 | 0 | 0 | 30.56867435 | 21.18858576 | 0.081503231 | ||||||
Tb927.11.3590 | 40S ribosomal protein S4 | Ribosome | Exponential | 0.001554846 | 0 | 0 | 643.1503578 | -1 | 0.417916999 | ||||||
Tb927.11.360 | hypothetical protein, conserved,ATP-binding protein, putative | 0 | Eq10 | 0.166262847 | 5.60393E-7 | 0.156279297 | 2.190390507 | 18.57230902 | 0.055264141 | ||||||
Tb927.11.3640 | Mitchondrial LSU ribosomal protein | Mitochondrial translation | Eq10 | 0.183394844 | 6.0E-12 | 0.07708269 | 23.32478962 | 20.56814432 | 0.081881806 | ||||||
Tb927.11.3650 | adenylosuccinate synthetase, putative | Nucleotides | Exponential | 0.00517377 | 0 | 0 | 193.2826496 | 133.9733291 | 0.622667056 | ||||||
Tb927.11.3660 | dynein light chain, putative,dynein Tctex1 family, putative | Cytoskeleton | Exponential | 0.026219086 | 0 | 0 | 38.14015437 | 26.43674612 | 0.090822183 | ||||||
Tb927.11.3670 | hypothetical protein, conserved | 0 | Exponential | 0.048516822 | 0 | 0 | 20.61140794 | 14.28673983 | 0.034140145 | ||||||
Tb927.11.3680 | calmodulin, putative | Calcium | Eq9 | 0.001083794 | 0.069562108 | 0.011194088 | 15.52557731 | 11.14191771 | 0.033325632 | ||||||
Tb927.11.3690 | hypothetical protein, conserved | 0 | Exponential | 0.04169936 | 0 | 0 | 23.98118319 | 16.62249327 | 0.069769692 | ||||||
Tb927.11.370 | repressor activator protein 1 (RAP1) | chromatin | Eq10 | 0.108861681 | 0 | 0.108734671 | 0.063235444 | 28.60458612 | 0.15168349 | ||||||
Tb927.11.3700 | hypothetical protein, conserved | 0 | Eq10 | 0.115525475 | 0 | 0.114280252 | 0.560829377 | 26.49692774 | 0.134814507 | ||||||
Tb927.11.3710 | hypothetical protein, conserved | 0 | Eq10 | 0.061566822 | 8.3847E-8 | 0.059496784 | 3.296135769 | 49.91491556 | 0.123417381 | ||||||
Tb927.11.3720 | hypothetical protein, conserved | 0 | Eq10 | 0.069443403 | 0.002514891 | 0.049323684 | 31.12150692 | 40.52206278 | 0.094497971 | ||||||
Tb927.11.3730 | leucyl-tRNA synthetase, putative (LeuRS) | Translation tRNA | Exponential | 0.005601511 | 0 | 0 | 178.5232525 | 123.7428832 | 0.704639082 | ||||||
Tb927.11.3740 | proteasome regulatory ATPase subunit 2 (RPT2) | Ubiquitin & proteasome | Eq10 | 0.107779085 | 0 | 0.107539361 | 0.123806599 | 28.37576151 | 0.073800966 | ||||||
Tb927.11.3750 | NADH-cytochrome b5 reductase, putative (B5R) | Mitochondrial electron transport | Eq10 | 0.115856841 | 0 | 0.115600246 | 0.11467686 | 26.39845133 | 0.02208067 | ||||||
Tb927.11.3760 | hypothetical protein | 0 | Eq10 | 0.083522762 | 3.87921E-7 | 0.078187593 | 4.641931602 | 36.9964242 | 0.091522537 | ||||||
Tb927.11.3770 | hypothetical protein, conserved | 0 | Eq10 | 0.149281882 | 2.53605E-7 | 0.14257882 | 1.819084356 | 20.62771082 | 0.056351503 | ||||||
Tb927.11.3780 | subtilisin-like serine peptidase,serine peptidase, clan SB, family S8-like protein | Protease or peptidase | Exponential | 0.025966411 | 0 | 0 | 38.51129025 | 26.693995 | 0.120964402 | ||||||
Tb927.11.3790 | hypothetical protein, conserved | 0 | Eq10 | 0.17702575 | 3.35862E-7 | 0.170116217 | 1.33206621 | 17.37624407 | 0.059087109 | ||||||
Tb927.11.380 | hypothetical protein, conserved | 0 | Eq9 | 0.017680368 | 2.864878177 | 0.018360202 | 0.680982668 | 1.180078983 | 0.054663897 | ||||||
Tb927.11.3800 | hypothetical protein, conserved | 0 | Eq9 | 0.015479217 | 3.083903013 | 0.018804858 | 0.588230091 | 0.757462978 | 0.088998872 | ||||||
Tb927.11.3830 | hypothetical protein, conserved | 0 | Eq10 | 0.156954017 | 4.0E-12 | 0.104929308 | 13.71822483 | 21.09028101 | 0.033371036 | ||||||
Tb927.11.3840 | hypothetical protein, conserved | 0 | Eq10 | 0.197914589 | 3.9422E-7 | 0.189916391 | 1.233942667 | 15.54611921 | 0.068786452 | ||||||
Tb927.11.3850 | AMP deaminase, putative | Nucleotides | Exponential | 0.0421753 | 0 | 0 | 23.71056042 | 16.4349103 | 0.139427148 | ||||||
Tb927.11.3860 | hypothetical protein, conserved | 0 | Eq10 | 0.18615181 | 0 | 0.05718742 | 30.72264327 | 22.7692008 | 0.044311145 | ||||||
Tb927.11.3870 | katanin, putative | Protease or peptidase | Eq9 | 0.001316141 | 0.123520702 | 0.014689102 | 8.728190988 | 6.261498928 | 0.012382911 | ||||||
Tb927.11.3880 | actin, putative (TRYPARP) | Cytoskeleton | Eq9 | 1.23783E-4 | 0.076453948 | 0.003928998 | 13.47003975 | 9.460594654 | 0.016748854 | ||||||
Tb927.11.3890 | N(2), N(2)-dimethylguanosine tRNA methyltransferase, putative | rRNA tRNA processing | Eq9 | 0.002607826 | 0.108829149 | 0.011252328 | 11.05341212 | 8.413660526 | 0.053278712 | ||||||
Tb927.11.390 | hypothetical protein, conserved | 0 | Exponential | 0.030594687 | 0 | 0 | 32.68541326 | 22.65580416 | 0.07665856 | ||||||
Tb927.11.3900 | glycosyltransferase family-like protein, putative | Glycan synthesis & metabolism | Eq10 | 0.164003355 | 3.45239E-7 | 0.157617191 | 1.434449312 | 18.75554323 | 0.095357838 | ||||||
Tb927.11.3910 | hypothetical protein, conserved, no yeast or human match | 0 | Exponential | 0.033210198 | 0 | 0 | 30.11123298 | 20.87151289 | 0.212292393 | ||||||
Tb927.11.3930 | hypothetical protein, conserved | 0 | Eq9 | 0.001850103 | 0.145300058 | 0.012784877 | 7.779198248 | 5.719878674 | 0.014364792 | ||||||
Tb927.11.3940 | hypothetical protein, conserved | Mitochondrial pathway | Eq10 | 0.308344903 | 0 | 0.087019541 | 19.88787101 | 14.24971819 | 0.024561992 | ||||||
Tb927.11.3950 | hypothetical protein, conserved | 0 | Eq9 | 1.18116E-4 | 0.083052105 | 0.003865359 | 12.39094552 | 8.699963093 | 0.021648821 | ||||||
Tb927.11.3960 | hypothetical protein, conserved | 0 | Eq10 | 0.19651143 | 9.142E-9 | 0.195188388 | 0.205801784 | 15.56630373 | 0.051133455 | ||||||
Tb927.11.3970 | hypothetical protein, conserved | 0 | Exponential | 0.019599342 | 0 | 0 | 51.0221206 | 35.36584139 | 0.192247075 | ||||||
Tb927.11.3980 | mitochondrial processing peptidase alpha subunit, MMPalpha | Mitochondrial biogenesis | Exponential | 0.003409952 | 0 | 0 | 293.2592956 | 203.2718539 | 1.140234387 | ||||||
Tb927.11.3990 | hypothetical protein, conserved | 0 | Exponential | 0.051251309 | 0 | 0 | 19.51169663 | 13.52447748 | 0.071756097 | ||||||
Tb927.11.400 | hypothetical protein, conserved | 0 | Eq9 | 0.00296783 | 0.08556436 | 0.012894276 | 13.8951321 | 10.48461199 | 0.039735955 | ||||||
Tb927.11.4000 | hypothetical protein, conserved | 0 | Eq10 | 0.256486819 | 0 | 0.077594515 | 22.58531169 | 16.63084745 | 0.047125731 | ||||||
Tb927.11.4020 | hypothetical protein, conserved | 0 | Exponential | 0.02507441 | 0 | 0 | 39.88129746 | 27.64361143 | 0.115249836 | ||||||
Tb927.11.4030 | hypothetical protein, conserved, no clear yeast or human matches | 0 | Eq10 | 0.125104495 | 2.04178E-7 | 0.117245312 | 3.046792758 | 24.69618559 | 0.181876658 | ||||||
Tb927.11.4040 | hypothetical protein, conserved | 0 | Eq10 | 0.176332069 | 2.83026E-7 | 0.168163963 | 1.589131776 | 17.46789694 | 0.065853029 | ||||||
Tb927.11.4050 | hypothetical protein, conserved | 0 | Eq10 | 0.21750633 | 1.15223E-6 | 0.207574337 | 1.270151073 | 14.15813684 | 0.02294672 | ||||||
Tb927.11.410 | hypothetical protein, conserved | 0 | Eq9 | 0.036200062 | 2.574088361 | 0.018701693 | 1.124648496 | 15.17793417 | 0.069269042 | ||||||
Tb927.11.4130 | ubiquitin-like protein, putative | Ubiquitin & proteasome | Eq10 | 0.085256344 | 0 | 0.083916946 | 1.108564873 | 35.93456984 | 0.144755189 | ||||||
Tb927.11.4140 | hypothetical protein, conserved | 0 | Exponential | 0.05864735 | 0 | 0 | 17.05106891 | 11.81890726 | 0.072997463 | ||||||
Tb927.11.4150 | hypothetical protein, conserved | 0 | Eq9 | 6.00165E-4 | 0.076922973 | 0.006652671 | 14.06308032 | 10.109303 | 0.036864712 | ||||||
Tb927.11.4160 | hypothetical protein, conserved,predicted C2 domain protein | 0 | Exponential | 0.034721361 | 0 | 0 | 28.80071419 | 19.9631381 | 0.154546459 | ||||||
Tb927.11.4180 | hypothetical protein, conserved | 0 | Eq10 | 0.058123214 | 2.66026E-7 | 0.054774171 | 6.010136567 | 53.10096502 | 0.17076331 | ||||||
Tb927.11.420 | hypothetical protein, conserved | 0 | Exponential | 0.037287286 | 0 | 0 | 26.81879313 | 18.58937502 | 0.071316993 | ||||||
Tb927.11.4200 | ERGIC53 paralogue, lectin-like, ER quality control | Vesicular transport | Exponential | 0.007006416 | 0 | 0 | 142.726319 | 98.93034697 | 0.607601388 | ||||||
Tb927.11.4210 | hypothetical protein, conserved | 0 | Eq10 | 0.05969141 | 9.8156E-8 | 0.05763652 | 3.481426487 | 51.49006605 | 0.2363826 | ||||||
Tb927.11.4220 | palmitoyl acyltransferase 6, putative | Lipids & fatty acids | Eq9 | 0.001296555 | 0.078785013 | 0.012096042 | 13.82575814 | 9.964034557 | 0.049509836 | ||||||
Tb927.11.4230 | hypothetical protein, conserved | 0 | Exponential | 0.046372465 | 0 | 0 | 21.56452093 | 14.94739294 | 0.071464772 | ||||||
Tb927.11.4240 | hypothetical protein, conserved | 0 | Eq9 | 0.025282817 | 3.024238002 | 0.032674753 | 0.581656053 | 0.686852932 | 0.028367595 | ||||||
Tb927.11.4250 | hypothetical protein, conserved | 0 | Exponential | 0.051507048 | 0 | 0 | 19.41481884 | 13.45732927 | 0.05149556 | ||||||
Tb927.11.4260 | hypothetical protein, conserved | 0 | Eq9 | 0.011756818 | 0.243466753 | 0.014991641 | 6.990831148 | 7.346770763 | 0.102236383 | ||||||
Tb927.11.4270 | hypothetical protein, conserved | 0 | Eq9 | 0.016172168 | 0.191503937 | 0.020467394 | 8.619879518 | 8.455002308 | 0.021026823 | ||||||
Tb927.11.4280 | hypothetical protein, conserved | 0 | Exponential | 0.022322539 | 0 | 0 | 44.79777131 | 31.05144739 | 0.100967958 | ||||||
Tb927.11.4290 | 40S ribosomal protein S12 | Ribosome | Exponential | 0.003607468 | 0 | 0 | 277.2027238 | 192.1422887 | 0.341730659 |
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Gene | Method PC | Method BF | |||||||
Tb927.3.2230 | Eq10 | Eq10 | |||||||
Tb927.7.4260 | Eq10 | Eq10 | |||||||
Tb927.3.5330 | Eq10 | Eq10 | |||||||
Tb927.6.3340 | Eq10 | Eq10 | |||||||
Tb927.11.11030 | Eq10 | Eq10 | |||||||
Tb927.11.1440 | Eq10 | Eq10 | |||||||
Tb927.11.4050 | Eq10 | Eq10 | |||||||
Tb927.6.1270 | Eq10 | Eq10 | |||||||
Tb927.5.2860 | Eq10 | Eq10 | |||||||
Tb927.3.3360 | Eq10 | Eq10 | |||||||
Tb927.10.9400 | Eq10 | Eq10 | |||||||
Tb927.6.3210 | Eq10 | Eq10 | |||||||
Tb927.8.5230 | Eq10 | Eq10 | |||||||
Tb927.10.5790 | Eq10 | Eq10 | |||||||
Tb927.10.15430 | Eq10 | Eq10 | |||||||
Tb927.10.7140 | Eq10 | Eq10 | |||||||
Tb927.10.730 | Eq10 | Eq10 | |||||||
Tb927.10.8800 | Eq10 | Eq10 | |||||||
Tb927.10.12980 | Eq10 | Eq10 | |||||||
Tb927.3.1390 | Eq10 | Eq10 | |||||||
Tb927.10.4230 | Eq10 | Eq10 | |||||||
Tb927.4.2170 | Eq10 | Eq10 | |||||||
Tb927.5.4410 | Eq10 | Eq10 | |||||||
Tb927.9.13770 | Eq10 | Eq10 | |||||||
Tb927.9.15490 | Eq10 | Eq10 | |||||||
Tb927.8.6780 | Eq10 | Eq10 | |||||||
Tb927.7.1330 | Eq10 | Eq10 | |||||||
Tb927.10.3620 | Eq10 | Eq10 | |||||||
Tb927.7.2270 | Eq10 | Eq10 | |||||||
Tb927.11.11510 | Eq10 | Eq10 | |||||||
Tb927.9.8550 | Eq10 | Eq10 | |||||||
Tb927.7.5740 | Eq10 | Eq10 | |||||||
Tb927.5.310 | Eq10 | Eq10 | |||||||
Tb927.11.8260 | Eq10 | Eq10 | |||||||
Tb927.11.710 | Eq10 | Eq10 | |||||||
Tb927.9.11700 | Eq10 | Eq10 | |||||||
Tb927.7.4710 | Eq10 | Eq10 | |||||||
Tb927.1.990 | Eq10 | Eq10 | |||||||
Tb927.11.11720 | Eq10 | Eq10 | |||||||
Tb927.11.11670 | Eq10 | Eq10 | |||||||
Tb927.11.7310 | Eq10 | Eq10 | |||||||
Tb927.11.15220 | Eq10 | Eq10 | |||||||
Tb927.11.1730 | Eq10 | Eq10 | |||||||
Tb927.6.1410 | Eq10 | Eq10 | |||||||
Tb927.11.3790 | Eq10 | Eq10 | |||||||
Tb927.11.13130 | Eq10 | Eq10 | |||||||
Tb927.10.1430 | Eq10 | Eq10 | |||||||
Tb927.11.11660 | Eq10 | Eq10 | |||||||
Tb927.10.7740 | Eq10 | Eq10 | |||||||
Tb927.10.1230 | Eq10 | Eq10 | |||||||
Tb927.10.9180 | Eq10 | Eq10 | |||||||
Tb927.10.3470 | Eq10 | Eq10 | |||||||
Tb927.5.550 | Eq10 | Eq10 | |||||||
Tb927.10.4510 | Eq10 | Eq10 | |||||||
Tb927.11.15760 | Eq10 | Eq10 | |||||||
Tb927.5.1020 | Eq10 | Eq10 | |||||||
Tb927.10.8690 | Eq10 | Eq10 | |||||||
Tb927.9.15050 | Eq10 | Eq10 | |||||||
Tb927.3.5320 | Eq10 | Eq10 | |||||||
Tb927.7.1360 | Eq10 | Eq10 | |||||||
Tb927.3.3260 | Eq10 | Eq10 | |||||||
Tb927.10.15240 | Eq10 | Eq10 | |||||||
Tb927.11.15400 | Eq10 | Eq10 | |||||||
Tb927.6.4080 | Eq10 | Eq10 | |||||||
Tb927.11.14900 | Eq10 | Eq10 | |||||||
Tb927.10.15940 | Eq10 | Eq10 | |||||||
Tb927.10.8400 | Eq10 | Eq10 | |||||||
Tb927.9.1500 | Eq10 | Eq10 | |||||||
Tb927.6.4520 | Eq10 | Eq10 | |||||||
Tb927.11.250 | Eq10 | Eq10 | |||||||
Tb927.7.2260 | Eq10 | Eq10 | |||||||
Tb927.10.15000 | Eq10 | Eq10 | |||||||
Tb927.5.3460 | Eq10 | Eq10 | |||||||
Tb927.10.6870 | Eq10 | Eq10 | |||||||
Tb927.9.5260 | Eq10 | Eq10 | |||||||
Tb927.8.3430 | Eq10 | Eq10 | |||||||
Tb927.10.350 | Eq10 | Eq10 | |||||||
Tb927.8.1100 | Eq10 | Eq10 | |||||||
Tb927.5.3710 | Eq10 | Eq10 | |||||||
Tb927.11.2330 | Eq10 | Eq10 | |||||||
Tb927.7.1170 | Eq10 | Eq10 | |||||||
Tb927.1.3260 | Eq10 | Eq10 | |||||||
Tb927.10.1960 | Eq10 | Eq10 | |||||||
Tb927.11.12500 | Eq10 | Eq10 | |||||||
Tb927.11.10610 | Eq10 | Eq10 | |||||||
Tb927.11.15430 | Eq10 | Eq10 | |||||||
Tb927.6.3540 | Eq10 | Eq10 | |||||||
Tb927.6.3890 | Eq10 | Eq10 | |||||||
Tb927.11.7370 | Eq10 | Eq10 | |||||||
Tb927.2.3480 | Eq10 | Eq10 | |||||||
Tb927.6.3000 | Eq10 | Eq10 | |||||||
Tb927.6.1230 | Eq10 | Eq10 | |||||||
Tb927.11.13200 | Eq10 | Eq10 | |||||||
Tb927.8.5510 | Eq10 | Eq10 | |||||||
Tb927.9.10470 | Eq10 | Eq10 | |||||||
Tb927.10.3590 | Eq10 | Eq10 | |||||||
Tb927.6.1830 | Eq10 | Eq10 | |||||||
Tb927.2.5150 | Eq10 | Eq10 | |||||||
Tb927.10.9130 | Eq10 | Eq10 |