Organisms

What is an Organism?

17 Organisms found

Boreogadus saida

ToxiGen - Reproductive toxicity and transgenerational effects of petroleum mixtures in fish

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/44932

Synonyms: Gadus saida

Salmonella enterica serovar Typhimurium strain 14028s

Adaptation of Salmonella enterica

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/590

Prorocentrum cordatum

Heat stress response of the red-tide dinoflagellate Prorocentrum cordatum

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/2364126

Aromatoleum aromaticum

EbN1 Systems Biology

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/551760

Mycoplasma pneumoniae

MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/2104

Synonyms: Filterable agent of primary atypical pneumonia, Schizoplasma pneumoniae

Pseudomonas sp. PAO1

EmPowerPutida

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/1708767

Pseudomonas mendocina

EmPowerPutida

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/300

Pseudomonas aeruginosa

EmPowerPutida, Mathematical modelling of the antibiotic-induced morphological transition of Pseudomonas aeruginosa

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/287

Synonyms: Bacterium aeruginosum, Pseudomonas pyocyanea, Bacterium pyocyaneum, Micrococcus pyocyaneus, Bacillus aeruginosus, Pseudomonas polycolor, Bacillus pyocyaneus

Systems toxicology of Atlantic cod, ToxiGen - Reproductive toxicity and transgenerational effects of petroleum mixtures in fish

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/8049

GenoSysFat, DigiSal, ToxiGen - Reproductive toxicity and transgenerational effects of petroleum mixtures in fish

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/7955

Synonyms: Cyprinus rerio, Danio frankei, zebra danio, Brachydanio rerio frankei, Danio rerio frankei, Brachydanio rerio

iRhythmics, Early Metabolic Injury (LiSyM-EMI - Pillar I), Chronic Liver Disease Progression (LiSyM-DP - Pillar II), Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III), LiSyM Core Infrastructure and Management (LiSyM-PD), Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV), Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP), Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF), The Hedgehog Signalling Pathway (LiSyM-JGMMS), Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM), SBEpo - Systems Biology of Erythropoietin, MS_DILI, MESI-STRAT, PoLiMeR - Polymers in the Liver: Metabolism and Regulation, Working Group Nicole Radde, Biomics Projects, Hi-IMPAcTB, SteaPKMod, test project for RNAseq of mouse skin samples

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/10090

Synonyms: mouse

Whole body modelling of glucose metabolism in malaria patients, SysVirDrug, IMOMESIC, iRhythmics, Early Metabolic Injury (LiSyM-EMI - Pillar I), Chronic Liver Disease Progression (LiSyM-DP - Pillar II), Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III), LiSyM Core Infrastructure and Management (LiSyM-PD), Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV), Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP), Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF), The Hedgehog Signalling Pathway (LiSyM-JGMMS), Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM), FAIRDOM user meeting, HUMET Startup, SBEpo - Systems Biology of Erythropoietin, Service to Milano-Bicocca with respect to their ATP-ROS model (Active NOW), Service to University of Lisbon (Portugal) with respect to their CFTR maturation model (Active NOW), Service to LCSB (Luxembourg) with respect to ROS management in Parkinson’s disease and cancer model (Active NOW), Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW), Service to Universidade Católica Portugues with respect to their Molecular Insight into Autism Spectrum Disorder (ASD) model (Active NOW), Service to Slovenia with respect to their Protease signaling network in neurodegeneration model (Active NOW), Service to University of Duisburg- Essen (Germany): with respect to their The Yin-Yang of Metabolism; Endometatoxicity (YYME) model (Active NOW), Service to Sheffield University (UK): with respect to Mitochondrial perfect adaptation model (Active NOW), Service to Sanquin (Amsterdam): with respect to Modelling of acute and chronic inflammation (Prospective), Service to Munich (Germany): with respect toCharged peptide to charged membrane binding model (Prospective), CausalDB, Colosys, MS_DILI, MESI-STRAT, INCOME, ROS detailed model for MSB manucript, Steroid biosynthesis, DCM, New LiSyM project, PoLiMeR - Polymers in the Liver: Metabolism and Regulation, OLCIR: Optimization of Lung Cancer Therapy with Ionizing Radiation, NAD COMPARTMENTATION, Bergen(Ziegler lab) project AF-NADase, NAMPT affinity, Stress granules, NAD phylogeny, CF transcriptome, miRiAD - exploring the role of microRNAs in T cell function and anti-viral defence, ComPASs - Common Pathways in Amyotrophic Lateral Sclerosis (ALS) and Spinal Muscular Atrophy (SMA), LungCARD - Blood test for clinical therapy guidance of non-small cell lung cancer patients, UnCentre - Unlocking satellite DNA and centromere structure in vertebrate chromosomes, Toggle switch, Biomics Projects, Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population, COVID-19 Disease Map, COVID-19 related studies and tools in Germany, nfdi4health - German National Research Data Infrastructure for Personal Health Data, Reduce Complexity (RCO) reconstruction, Backup Transcriptomic data, C19DM-Neo4j, SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation, Hi-IMPAcTB, Consensus Hallmark Annotation, C19DM - Macrophage logical model, Covid-19 Interferon pathway modelling and analysis, CoVIDD - Coronavirus interactions in drug discovery - optimization and implementation, Mass spectrometry proteomics for biomarker discovery, Molecular characterization and angiogenic properties of extracellular vesicles in healthy and preeclamptic amniotic fluid, Investigation of the activity of antisense oligonucleotides targeting multiple genes, DeCipher, NIRBTEST, iPlacenta- Placenta on a chip, Glucose metabolism in cancer cell lines, Pan-cancer multiSOM project, ARAX: a web-based computational reasoning system for translational biomedicine

Taxonomy URI: http://purl.bioontology.org/ontology/NCBITAXON/9606

Synonyms: man

Streptomyces coelicolor

STREAM, SYSTERACT, INBioPharm

Taxonomy URI: http://purl.obolibrary.org/obo/NCBITaxon_1902

Escherichia coli

SUMO, KOSMOBAC, Manchester Institute for Biotechnology, LEANPROT, Millar group, HOTSOLUTE, SynBio4Flav, Toggle switch, CEPOPA - Development of sustainable chemoenzymatic processes for optically pure amines from alcohols or alkynes, Function, control and engineering of microbial methylotrophy

Taxonomy URI: http://purl.obolibrary.org/obo/NCBITaxon_562

Saccharomyces cerevisiae

MOSES, TRANSLUCENT, WineSys, ICYSB 2015 - International Practical Course in Systems Biology, XyloCut, ROBUSTYEAST, SynBio4Flav, Yeast glycolytic oscillations, CoolWine

Taxonomy URI: http://purl.obolibrary.org/obo/NCBITaxon_4932

Synonyms: yeast, lager beer yeast, brewer's yeast, baker's yeast

Pseudomonas fluorescens

SCaRAB, EmPowerPutida

Taxonomy URI: http://purl.obolibrary.org/obo/NCBITaxon_294

Pseudomonas putida

PSYSMO, EmPowerPutida, SynBio4Flav, Acetyl-coa production in Pseudomonas putida

Taxonomy URI: http://purl.obolibrary.org/obo/NCBITaxon_303

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