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boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C26H42N8O17P3S"/> <species metaid="M_glyc2p_c" sboTerm="SBO:0000247" id="M_glyc2p_c" name="Glycerol_2_phosphate" compartment="Cytosol" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H7O6P"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#M_glyc2p_c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.metabolite/glyc2p_c"/> <rdf:li rdf:resource="http://identifiers.org/chebi/17270"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02979"/> <rdf:li 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xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#M_trp__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.metabolite/trp__L_e"/> <rdf:li rdf:resource="http://identifiers.org/chebi/16828"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00078"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM94"/> <rdf:li rdf:resource="http://identifiers.org/reactome/29500"/> <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00065"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="M_trp__L_p" sboTerm="SBO:0000247" id="M_trp__L_p" name="L_Tryptophan" compartment="Periplasm" initialConcentration="0" 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xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2AGPE180tipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPE180tipp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2agpe180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1700"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2AGPE181tipp" sboTerm="SBO:0000185" id="R_2AGPE181tipp" name="2_Acyl_sn_glycero_3_phosphoethanolamine__n_C181__transporter_via_facilitated_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2AGPE181tipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPE181tipp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94756"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2agpe181_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1700"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2AGPG160tipp" sboTerm="SBO:0000185" id="R_2AGPG160tipp" name="2_Acyl_sn_glycero_3_phosphoglycerol__n_C160__transporter_via_facilitated_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2AGPG160tipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPG160tipp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94767"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2agpg160_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1700"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2AGPG161tipp" sboTerm="SBO:0000185" id="R_2AGPG161tipp" name="2_Acyl_sn_glycero_3_phosphoglycerol__n_C161__transporter_via_facilitated_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2AGPG161tipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPG161tipp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94768"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2agpg161_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1700"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2AGPG180tipp" sboTerm="SBO:0000185" id="R_2AGPG180tipp" name="2_Acyl_sn_glycero_3_phosphoglycerol__n_C180__transporter_via_facilitated_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2AGPG180tipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPG180tipp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94769"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2agpg180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1700"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2AGPG181tipp" sboTerm="SBO:0000185" id="R_2AGPG181tipp" name="2_Acyl_sn_glycero_3_phosphoglycerol__n_C181__transporter_via_facilitated_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2AGPG181tipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPG181tipp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94770"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2agpg181_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1700"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2DHGLCNkt_tpp" sboTerm="SBO:0000185" id="R_2DHGLCNkt_tpp" name="2_ketogluconate_transporter" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2DHGLCNkt_tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2DHGLCNkt_tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2dhglcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3377"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2DHGLCNtex" sboTerm="SBO:0000185" id="R_2DHGLCNtex" name="ketogluconate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_2DHGLCNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2DHGLCNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2dhglcn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dhglcn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_2PQQS" sboTerm="SBO:0000176" id="R_2PQQS" name="pyrroloquinoline_quinone_biosynthesis__2pqq_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_2PQQS"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3pqq_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2pqq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_34DHCINMtex" sboTerm="SBO:0000185" id="R_34DHCINMtex" name="DHCINM_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_34DHCINMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/34DHCINMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhcinm_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhcinm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_34DHCINMtpp" sboTerm="SBO:0000185" id="R_34DHCINMtpp" name="DHCINM_transport_via_diffusion___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_34DHCINMtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/34DHCINMtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhcinm_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhcinm_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_34DHPHEtex" sboTerm="SBO:0000185" id="R_34DHPHEtex" name="3_4_Dihydroxy_L_phenylalanine_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_34DHPHEtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhphe_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhphe_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_34DHPHEtpp" sboTerm="SBO:0000185" id="R_34DHPHEtpp" name="3_4_Dihydroxy_L_phenylalanine_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_34DHPHEtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhphe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhphe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3HAACOAT100" sboTerm="SBO:0000176" id="R_3HAACOAT100" name="3_Hydroxyacyl_ACPCoA_Transacylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT100"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT100"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hdecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT120" sboTerm="SBO:0000176" id="R_3HAACOAT120" name="3_Hydroxyacyl_ACPCoA_Transacylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT120"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hddecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT121" sboTerm="SBO:0000176" id="R_3HAACOAT121" name="3_Hydroxyacyl_ACPCoA_Transacylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT121"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT121"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hcddec5eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT140" sboTerm="SBO:0000176" id="R_3HAACOAT140" name="3_Hydroxyacyl_ACPCoA_Transacylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT140"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hmrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT141" sboTerm="SBO:0000176" id="R_3HAACOAT141" name="3_Hydroxyacyl_ACPCoA_Transacylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT141"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hcmrs7eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT60" sboTerm="SBO:0000176" id="R_3HAACOAT60" name="3_Hydroxyacyl_ACPCoA_Transacylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT60"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT60"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hhexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT80" sboTerm="SBO:0000176" id="R_3HAACOAT80" name="3_Hydroxyacyl_ACPCoA_Transacylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT80"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT80"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hoctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD100" sboTerm="SBO:0000176" id="R_3HAD100" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C100_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD100"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD100"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hdecACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdec2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD120" sboTerm="SBO:0000176" id="R_3HAD120" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD120"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hddecACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tddec2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD121" sboTerm="SBO:0000176" id="R_3HAD121" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C121_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD121"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD121"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hcddec5eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c5ddeceACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD140" sboTerm="SBO:0000176" id="R_3HAD140" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD140"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hmrsACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tmrs2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD141" sboTerm="SBO:0000176" id="R_3HAD141" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD141"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hcmrs7eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c7mrseACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD160" sboTerm="SBO:0000176" id="R_3HAD160" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD160"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hpalmACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tpalm2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD161" sboTerm="SBO:0000176" id="R_3HAD161" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD161"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hcpalm9eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c9palmeACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD180" sboTerm="SBO:0000176" id="R_3HAD180" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD180"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hoctaACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_toctd2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD181" sboTerm="SBO:0000176" id="R_3HAD181" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD181"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hcvac11eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c11vaceACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD40" sboTerm="SBO:0000176" id="R_3HAD40" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C40_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD40"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3haACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_but2eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD60" sboTerm="SBO:0000176" id="R_3HAD60" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C60_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD60"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD60"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hhexACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thex2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAD80" sboTerm="SBO:0000176" id="R_3HAD80" name="3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C80_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAD80"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD80"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hoctACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_toct2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HBCD" sboTerm="SBO:0000176" id="R_3HBCD" name="3_hydroxybutyryl_CoA_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HBCD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94890"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HBCOAHL" sboTerm="SBO:0000176" id="R_3HBCOAHL" name="3_hydroxyisobutyryl_CoA_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HBCOAHL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HBCOAHL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hibutcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3MBZALDH" sboTerm="SBO:0000176" id="R_3MBZALDH" name="Benzyl_alcohol_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3MBZALDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3MBZALDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mbzalc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mbzald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_128"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3MBZDH" sboTerm="SBO:0000176" id="R_3MBZDH" name="Benzaldehyde_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3MBZDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3MBZDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mbzald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_m_tol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_131"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3MBt2pp" sboTerm="SBO:0000185" id="R_3MBt2pp" name="HIsovalerate_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3MBt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3MBt2pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94916"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mb_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3MBtex" sboTerm="SBO:0000185" id="R_3MBtex" name="3_methylbutanoic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3MBtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3MBtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94918"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mb_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mb_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3MCAT23DOX" sboTerm="SBO:0000176" id="R_3MCAT23DOX" name="catechol_2_3_dioxygenase__m_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3MCAT23DOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3MCAT23DOX"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94919"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mcat_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cchoxod_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OXOADPt_ex_" sboTerm="SBO:0000185" id="R_3OXOADPt_ex_" name="3_oxoadipate_transport__e_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_3OXOADPt_ex_"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3oxoadp_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oxoadp_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3OXOADPt_pp_" sboTerm="SBO:0000185" id="R_3OXOADPt_pp_" name="3_oxoadipate_MFS_transporter" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_3OXOADPt_pp_"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3oxoadp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1378"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3PQQS" sboTerm="SBO:0000176" id="R_3PQQS" name="Pyrroloquinolone_quinone_biosynthesis__3pqq_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_3PQQS"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4pqq_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3pqq_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3_4DHBZ1t_pp_" sboTerm="SBO:0000185" id="R_3_4DHBZ1t_pp_" name="3_4_dihidroxy_benzoate_reversible_trasporter_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_3_4DHBZ1t_pp_"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhbz_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3_4DHBZt2" sboTerm="SBO:0000185" id="R_3_4DHBZt2" name="Protocatechuate_outher_membrane_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3_4DHBZt2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3_4DHBZt2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhbz_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1382"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4ABUTabcpp" sboTerm="SBO:0000185" id="R_4ABUTabcpp" name="GABA_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4ABUTabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4abut_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3814"/> <fbc:geneProductRef fbc:geneProduct="PP_3815"/> <fbc:geneProductRef fbc:geneProduct="PP_3816"/> <fbc:geneProductRef fbc:geneProduct="PP_3817"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HBADH" sboTerm="SBO:0000176" id="R_4HBADH" name="4_hydroxy_benzyl_alcohol_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HBADH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4HBZtex" sboTerm="SBO:0000185" id="R_4HBZtex" name="4_Hydroxybenzoate_transport__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4HBZtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4HBZtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hbz_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbz_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1383"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPRODCabcpp" sboTerm="SBO:0000185" id="R_4HPRODCabcpp" name="cis_4_Hydroxy_D_proline_transport_via_ABC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPRODCabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_DC_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hpro_DC_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1259"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPRODCtex" sboTerm="SBO:0000185" id="R_4HPRODCtex" name="cis_4_hydroxy_L_proline_transport__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPRODCtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_DC_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hpro_DC_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4HPROE" sboTerm="SBO:0000176" id="R_4HPROE" name="4_hydroxyproline_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPROE"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_LT_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hpro_DC_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1258"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPROLTabcpp" sboTerm="SBO:0000185" id="R_4HPROLTabcpp" name="trans_4_Hydroxy_D_proline_transport_via_ABC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPROLTabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_LT_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" 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xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPROLTtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_LT_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hpro_LT_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4MBZALDH" sboTerm="SBO:0000176" id="R_4MBZALDH" name="Benzyl_alcohol_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4MBZALDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4MBZALDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4mbzalc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mbzald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_128"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4MBZDH" sboTerm="SBO:0000176" id="R_4MBZDH" name="Benzaldehyde_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4MBZDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4MBZDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4mbzald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_p_tol_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_131"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4MCAT23DOX" sboTerm="SBO:0000176" id="R_4MCAT23DOX" name="catechol_2_3_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4MCAT23DOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4MCAT23DOX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4mcat_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hmccms_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OD" sboTerm="SBO:0000176" id="R_4OD" name="4_oxalocrotonate_decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4OD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4OD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxalc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_op4en_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_091"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OD2" sboTerm="SBO:0000176" id="R_4OD2" name="4_oxalocrotonate_decarboxylase_p_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4OD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4OD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2omcm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hchd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_091"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4PCP" sboTerm="SBO:0000176" id="R_4PCP" name="tetrapeptide_L_D_carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4PCP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4PCP"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105116"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_LalaDgluMdapDala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4799"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4PCPpp" sboTerm="SBO:0000176" id="R_4PCPpp" name="tetrapeptide_L_D_carboxypeptidase__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4PCPpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4PCPpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_LalaDgluMdapDala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdap_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_5APTNabcpp" sboTerm="SBO:0000185" id="R_5APTNabcpp" name="D_amino_valeric_acid_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_5APTNabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aptn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1137"/> <fbc:geneProductRef fbc:geneProduct="PP_1138"/> <fbc:geneProductRef fbc:geneProduct="PP_1139"/> <fbc:geneProductRef fbc:geneProduct="PP_1140"/> <fbc:geneProductRef fbc:geneProduct="PP_1141"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_5APTNtex" sboTerm="SBO:0000185" id="R_5APTNtex" name="D_amino_valeric_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_5APTNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aptn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_5DH4DGLCD" sboTerm="SBO:0000176" id="R_5DH4DGLCD" name="5_dehydro_4_deoxyglucarate_dehydratase___decarboxylating_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_5DH4DGLCD"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5dh4dglc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25dop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3599"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_5DOAN" sboTerm="SBO:0000176" id="R_5DOAN" name="5__deoxyadenosine_nuclosidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_5DOAN"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/5DOAN"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dad_5_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5drib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_5OXPROabcpp" sboTerm="SBO:0000185" id="R_5OXPROabcpp" name="L_oxoproline_transport_via_ABC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_5OXPROabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5oxpro_p" stoichiometry="1" constant="true"/> 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<speciesReference species="M_6hnac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3939"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AAC24DABA" sboTerm="SBO:0000176" id="R_AAC24DABA" name="N_acetyl_diamonbutyric_acid_acylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AAC24DABA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aac24dab_c" stoichiometry="1" constant="true"/> <speciesReference 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xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AACTOOR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AACTOOR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mthgxl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AADSACYCL" sboTerm="SBO:0000176" id="R_AADSACYCL" name="2_Aminoadipate_6_semialdehyde" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF 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<fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AALDCDLsi" sboTerm="SBO:0000176" id="R_AALDCDLsi" name="Aminoacetaldehyde_CO2_ligase__spontaneous_reaction_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AALDCDLsi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2amsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference 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xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ABUTt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ABUTt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4abut_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4106"/> <fbc:geneProductRef fbc:geneProduct="PP_2543"/> <fbc:geneProductRef fbc:geneProduct="PP_2911"/> <fbc:geneProductRef fbc:geneProduct="PP_4756"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ABUTtex" sboTerm="SBO:0000185" id="R_ABUTtex" name="4_aminobutyrate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ABUTtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ABUTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> 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fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACALDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACALDtpp" sboTerm="SBO:0000185" id="R_ACALDtpp" name="acetaldehyde_reversible_transport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACALDtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACALDtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACGAMT" sboTerm="SBO:0000176" id="R_ACGAMT" name="UDP_N_acetylglucosamineundecaprenylphosphate_N_acetylglucosamine__1_phosphate_transferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACGAMT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACGAMT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> <speciesReference species="M_unaga_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1804"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACGK" sboTerm="SBO:0000176" id="R_ACGK" name="acetylglutamate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACGK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACGK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acg5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5289"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACGS" sboTerm="SBO:0000176" id="R_ACGS" name="N_acetylglutamate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACGS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACGS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5185"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOADH1" sboTerm="SBO:0000176" id="R_ACOADH1" name="acyl_CoA_dehydrogenase_2_Methyl_butanoyl_CoA" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACOADH1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACOADH1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2mbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACOADH2" sboTerm="SBO:0000176" id="R_ACOADH2" name="acyl_CoA_dehydrogenase__Isobutiryl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACOADH2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACOADH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ibcoa_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mp2coa_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACONCt4pp" sboTerm="SBO:0000185" id="R_ACONCt4pp" name="citrate_transport_via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACONCt4pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1416"/> <fbc:geneProductRef fbc:geneProduct="PP_1417"/> <fbc:geneProductRef fbc:geneProduct="PP_1418"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONIs" sboTerm="SBO:0000176" id="R_ACONIs" name="aconitate_isomerase__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACONIs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACONIs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acon_T_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACOTA" sboTerm="SBO:0000176" id="R_ACOTA" name="acetylornithine_transaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACOTA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACOTA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acorn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4481"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPPAT120" sboTerm="SBO:0000176" id="R_ACPPAT120" name="acyl__acyl_carrier_protein_phosphate_acyltransferase__C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPPAT120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPPAT120"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95395"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1912"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPPAT140" sboTerm="SBO:0000176" id="R_ACPPAT140" name="acyl__acyl_carrier_protein_phosphate_acyltransferase__C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPPAT140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPPAT140"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95396"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdcap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1912"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPPAT141" sboTerm="SBO:0000176" id="R_ACPPAT141" name="acyl__acyl_carrier_protein_phosphate_acyltransferase__C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPPAT141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPPAT141"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95397"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdceap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1912"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPPAT160" sboTerm="SBO:0000176" id="R_ACPPAT160" name="acyl__acyl_carrier_protein_phosphate_acyltransferase__C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPPAT160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPPAT160"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95398"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1912"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPPAT161" sboTerm="SBO:0000176" id="R_ACPPAT161" name="acyl__acyl_carrier_protein_phosphate_acyltransferase__C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPPAT161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPPAT161"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95399"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdceap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1912"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPPAT180" sboTerm="SBO:0000176" id="R_ACPPAT180" name="acyl__acyl_carrier_protein_phosphate_acyltransferase__C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPPAT180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPPAT180"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95400"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1912"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPPAT181" sboTerm="SBO:0000176" id="R_ACPPAT181" name="acyl__acyl_carrier_protein_phosphate_acyltransferase__C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPPAT181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPPAT181"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95401"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdceap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1912"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACPS1" sboTerm="SBO:0000176" id="R_ACPS1" name="acyl_carrier_protein_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACPS1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACPS1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95138"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_apoACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1183"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSERtex" sboTerm="SBO:0000185" id="R_ACSERtex" name="O_Acetyl_L_serine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACSERtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACSERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acser_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACSERtpp" sboTerm="SBO:0000185" id="R_ACSERtpp" name="O_Acetyl_L_serine_export_via_facilitated_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACSERtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACSERtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2872"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACTNtex" sboTerm="SBO:0000185" id="R_ACTNtex" name="acetoin_transpor__external_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACTNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_actn__R_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actn__R_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACTNtpp" sboTerm="SBO:0000185" id="R_ACTNtpp" name="_R__acetoin_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACTNtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_actn__R_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACt2rpp" sboTerm="SBO:0000185" id="R_ACt2rpp" name="acetate_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACt4pp" sboTerm="SBO:0000185" id="R_ACt4pp" name="NaAcetate_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1743"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACt5pp" sboTerm="SBO:0000185" id="R_ACt5pp" name="acetate_transport_in_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACt5pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACtex" sboTerm="SBO:0000185" id="R_ACtex" name="Acetate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ac_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ADA" sboTerm="SBO:0000176" id="R_ADA" name="Adenosine_deaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADA"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95320"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ins_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0591"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADCYRS" sboTerm="SBO:0000176" id="R_ADCYRS" name="adenosylcobyric_acid_synthase__glutamine_hydrolysing_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADCYRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADCYRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adcobdam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="4" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="4" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="4" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adcobhex_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="4" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="4" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="4" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADEt2rpp" sboTerm="SBO:0000185" id="R_ADEt2rpp" name="adenine_transport_via_proton_symport__reversible___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADEt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADEt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ade_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4653"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADEtex" sboTerm="SBO:0000185" id="R_ADEtex" name="adenine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADEtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ade_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ADK1" sboTerm="SBO:0000176" id="R_ADK1" name="adenylate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADK1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADK3" sboTerm="SBO:0000176" id="R_ADK3" name="adentylate_kinase__GTP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADK3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADK3"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97077"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADK4" sboTerm="SBO:0000176" id="R_ADK4" name="adentylate_kinase__ITP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADK4"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADK4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_idp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADNK1" sboTerm="SBO:0000176" id="R_ADNK1" name="adenosine_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADNK1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADNK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADNtex" sboTerm="SBO:0000185" id="R_ADNtex" name="adenosine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adn_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADOCBLS" sboTerm="SBO:0000176" id="R_ADOCBLS" name="Adenosylcobalamin_5__phosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADOCBLS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADOCBLS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_agdpcbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdmbzi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1681"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADOCBLabcpp" sboTerm="SBO:0000185" id="R_ADOCBLabcpp" name="Adenosylcobalamin_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADOCBLabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADOCBLabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adocbl_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0524"/> <fbc:geneProductRef fbc:geneProduct="PP_4687"/> <fbc:geneProductRef fbc:geneProduct="PP_4688"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0524"/> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADOCBLtonex" sboTerm="SBO:0000185" id="R_ADOCBLtonex" name="Adenosylcobalimin_transport_via_ton_system__extermal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADOCBLtonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADOCBLtonex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adocbl_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbl_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0525"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADPT" sboTerm="SBO:0000176" id="R_ADPT" name="adenine_phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADPT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADPT"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94780"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4266"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSELR" sboTerm="SBO:0000176" id="R_ADSELR" name="phosphoadenylyl_selenate_reductase__thioredoxin_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ADSELR"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3padsel_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_slnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSELR2" sboTerm="SBO:0000176" id="R_ADSELR2" name="phosphoadenylyl_selenate_reductase__glutaredoxin_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ADSELR2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3padsel_c" stoichiometry="1" constant="true"/> <speciesReference species="M_grxrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_grxox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_slnt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_2958"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5054"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSS" sboTerm="SBO:0000176" id="R_ADSS" name="adenylosuccinate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADSS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADSS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101120"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4889"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AEPabcpp" sboTerm="SBO:0000185" id="R_AEPabcpp" name="2_aminoethylphosphonate_ABC_transport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AEPabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AEPabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ameph_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ameph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0825"/> <fbc:geneProductRef fbc:geneProduct="PP_0824"/> <fbc:geneProductRef fbc:geneProduct="PP_0826"/> <fbc:geneProductRef fbc:geneProduct="PP_0827"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5135"/> <fbc:geneProductRef fbc:geneProduct="PP_5137"/> <fbc:geneProductRef fbc:geneProduct="PP_5136"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AEPTA" sboTerm="SBO:0000176" id="R_AEPTA" name="2_aminoethylphosphonate_pyruvate_transaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AEPTA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ameph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pald_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2209"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AEPtpp" sboTerm="SBO:0000185" id="R_AEPtpp" name="2_aminoethylphosphonate_outer_membrane_transporter__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AEPtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ameph_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ameph_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AGM3Pt2pp" sboTerm="SBO:0000185" id="R_AGM3Pt2pp" name="GlcNAc_anhMurNAc_tripeptide_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGM3Pt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM3Pt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anhgm3p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1355"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM4PCP" sboTerm="SBO:0000176" id="R_AGM4PCP" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_L_D_carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGM4PCP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM4PCP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anhgm4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm3p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4799"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM4PCPpp" sboTerm="SBO:0000176" id="R_AGM4PCPpp" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_L_D_carboxypeptidase__periplasmic_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGM4PCPpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM4PCPpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm3p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AGM4Pt2pp" sboTerm="SBO:0000185" id="R_AGM4Pt2pp" name="GlcNAc_anhMurNAc_tetrapeptide_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGM4Pt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM4Pt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1355"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGMDA" sboTerm="SBO:0000176" id="R_AGMDA" name="agmatine_deaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGMDA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGMDA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_agm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Ncbmpts_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0266"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGMHE" sboTerm="SBO:0000176" id="R_AGMHE" name="ADP_D_glycero_D_manno_heptose_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGMHE"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGMHE"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adphep_DD_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adphep_LD_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0501"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGMabcpp" sboTerm="SBO:0000185" id="R_AGMabcpp" name="agmatine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AGMabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_agm_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_agm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AGMt2pp" sboTerm="SBO:0000185" id="R_AGMt2pp" name="GlcNAc_anhMurNAc_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGMt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGMt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anhgm_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1355"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGMtex" sboTerm="SBO:0000185" id="R_AGMtex" name="agmatine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_agm_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_agm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AGPR" sboTerm="SBO:0000176" id="R_AGPR" name="N_acetyl_g_glutamyl_phosphate_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGPR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGPR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acg5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3633"/> <fbc:geneProductRef fbc:geneProduct="PP_0432"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGt3" sboTerm="SBO:0000185" id="R_AGt3" name="silver_transport_out_via_proton_antiport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGt3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGt3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ag_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ag_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5385"/> <fbc:geneProductRef fbc:geneProduct="PP_5386"/> <fbc:geneProductRef fbc:geneProduct="PP_5387"/> <fbc:geneProductRef fbc:geneProduct="PP_5388"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGtex" sboTerm="SBO:0000185" id="R_AGtex" name="copper__Ag__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AGtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ag_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ag_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AGtpp" sboTerm="SBO:0000185" id="R_AGtpp" name="copper_transport_in_via_permease__no_H_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AGtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ag_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ag_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AICART" sboTerm="SBO:0000176" id="R_AICART" name="phosphoribosylaminoimidazolecarboxamide_formyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AICART"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AICART"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115676"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_aicar_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fprica_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4822"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGt2rpp" sboTerm="SBO:0000185" id="R_AKGt2rpp" name="2_oxoglutarate_reversible_transport_via_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AKGt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1400"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGtex" sboTerm="SBO:0000185" id="R_AKGtex" name="alpha_ketoglutarate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AKGtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ALAALAr" sboTerm="SBO:0000176" id="R_ALAALAr" name="D_alanine_D_alanine_ligase__reversible_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAALAr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAALAr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__D_c" stoichiometry="2" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4346"/> <fbc:geneProductRef fbc:geneProduct="PP_1339"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAR" sboTerm="SBO:0000176" id="R_ALAR" name="alanine_racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5269"/> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATRS" sboTerm="SBO:0000176" id="R_ALATRS" name="Alanyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALATRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALATRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaala_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alatrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4474"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAabcpp" sboTerm="SBO:0000185" id="R_ALAabcpp" name="L_alanine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1137"/> <fbc:geneProductRef fbc:geneProduct="PP_1138"/> <fbc:geneProductRef fbc:geneProduct="PP_1139"/> <fbc:geneProductRef fbc:geneProduct="PP_1140"/> <fbc:geneProductRef fbc:geneProduct="PP_1141"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAt2pp" sboTerm="SBO:0000185" id="R_ALAt2pp" name="L_alanine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4840"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAt4pp" sboTerm="SBO:0000185" id="R_ALAt4pp" name="L_alanine_transport_in_via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0496"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAtex" sboTerm="SBO:0000185" id="R_ALAtex" name="L_alanine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ALDD31" sboTerm="SBO:0000176" id="R_ALDD31" name="Aminoacetaldehyde_oxidation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALDD31"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALDD31"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ALDD3y" sboTerm="SBO:0000176" id="R_ALDD3y" name="aldehyde_dehydrogenase__propanal__NADP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALDD3y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALDD3y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95754"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ALDD4" sboTerm="SBO:0000176" id="R_ALDD4" name="aldehyde_dehydrogenase__butanal__NAD_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALDD4"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALDD4"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95755"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_but_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ALGAC1" sboTerm="SBO:0000185" id="R_ALGAC1" name="O_Acetylation_of_Alginate__2_units___acetyl_coa_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGAC1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prealgac_M1_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1278"/> <fbc:geneProductRef fbc:geneProduct="PP_1280"/> <fbc:geneProductRef fbc:geneProduct="PP_1279"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGAC2" sboTerm="SBO:0000185" id="R_ALGAC2" name="O_Acetylation_of_Alginate__2_units___acetyl_coa_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGAC2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prealgac_M2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1280"/> <fbc:geneProductRef fbc:geneProduct="PP_1279"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGAC3" sboTerm="SBO:0000185" id="R_ALGAC3" name="O_Acetylation_of_Alginate__3_units___acetyl_coa_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGAC3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="3" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="3" constant="true"/> <speciesReference species="M_prealgac_M3_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1278"/> <fbc:geneProductRef fbc:geneProduct="PP_1280"/> <fbc:geneProductRef fbc:geneProduct="PP_1279"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGAC4" sboTerm="SBO:0000185" id="R_ALGAC4" name="O_Acetylation_of_Alginate__4_units___acetyl_coa_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGAC4"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="4" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="4" constant="true"/> <speciesReference species="M_prealgac_M4_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1278"/> <fbc:geneProductRef fbc:geneProduct="PP_1280"/> <fbc:geneProductRef fbc:geneProduct="PP_1279"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGAC5" sboTerm="SBO:0000185" id="R_ALGAC5" name="O_Acetylation_of_Alginate__5_units___acetyl_coa_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGAC5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="5" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_algac__M_p" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="5" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1278"/> <fbc:geneProductRef fbc:geneProduct="PP_1280"/> <fbc:geneProductRef fbc:geneProduct="PP_1279"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE1" sboTerm="SBO:0000176" id="R_ALGE1" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealg_MG_41_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE2" sboTerm="SBO:0000176" id="R_ALGE2" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealg_MG_32_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE3" sboTerm="SBO:0000176" id="R_ALGE3" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealg_MG_23_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE4" sboTerm="SBO:0000176" id="R_ALGE4" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE4"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealg_MG_14_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE5" sboTerm="SBO:0000176" id="R_ALGE5" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealginate__G_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE6" sboTerm="SBO:0000176" id="R_ALGE6" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealgac_M4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_algac_MG_41_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE7" sboTerm="SBO:0000176" id="R_ALGE7" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE7"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealgac_M3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_algac_MG_32_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE8" sboTerm="SBO:0000176" id="R_ALGE8" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE8"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealgac_M2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_algac_MG_23_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE9" sboTerm="SBO:0000176" id="R_ALGE9" name="Alginate_C5_mannuronate_epimerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE9"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealgac_M1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_algac_MG_14_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGL" sboTerm="SBO:0000176" id="R_ALGL" name="alginate_lyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALGL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95237"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="4" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_manur_p" stoichiometry="5" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1281"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGL2" sboTerm="SBO:0000176" id="R_ALGL2" name="alginate_lyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGL2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmanur_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tmanur_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1281"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGSex1" sboTerm="SBO:0000185" id="R_ALGSex1" name="Alginate_secretion__AlgE_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGSex1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_41_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealg_MG_41_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGSex10" sboTerm="SBO:0000185" id="R_ALGSex10" name="Alginate_secretion__AlgE_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGSex10"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_14_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_algac_MG_14_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGSex11" sboTerm="SBO:0000185" id="R_ALGSex11" name="Alginate_secretion__AlgE_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> 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<annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGSex12"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmanur_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmanur_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGSex13" sboTerm="SBO:0000185" id="R_ALGSex13" name="Alginate_secretion__AlgE_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> 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<annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGSex2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_32_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealg_MG_32_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGSex3" sboTerm="SBO:0000185" id="R_ALGSex3" name="Alginate_secretion__AlgE_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" 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id="R_ALGSex9" name="Alginate_secretion__AlgE_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGSex9"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_23_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_algac_MG_23_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTNRA" 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sboTerm="SBO:0000185" id="R_ALLTNt2rpp" name="allantoin_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALLTNt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALLTNt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alltn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alltn_c" stoichiometry="1" 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xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALPATE161pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alpp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lpp161_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4790"/> <fbc:geneProductRef fbc:geneProduct="PP_5226"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALPATE180pp" sboTerm="SBO:0000176" id="R_ALPATE180pp" name="apolipoprotein_N_acyltransferase__phosphatidylethanolamine__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALPATE180pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alpp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe180_p" stoichiometry="1" constant="true"/> <speciesReference 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xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALPATG160pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALPATG160pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95784"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alpp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg160_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lpp_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4790"/> <fbc:geneProductRef fbc:geneProduct="PP_5226"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALPATG161pp" sboTerm="SBO:0000176" id="R_ALPATG161pp" name="apolipoprotein_N_acyltransferase__phosphatidylglycerol__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALPATG161pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alpp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lpp161_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4790"/> <fbc:geneProductRef fbc:geneProduct="PP_5226"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALPATG180pp" sboTerm="SBO:0000176" id="R_ALPATG180pp" name="apolipoprotein_N_acyltransferase__phosphatidylglycerol__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALPATG180pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alpp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lpp180_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4790"/> <fbc:geneProductRef fbc:geneProduct="PP_5226"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALPATG181pp" sboTerm="SBO:0000176" id="R_ALPATG181pp" name="apolipoprotein_N_acyltransferase__phosphatidylglycerol__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALPATG181pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alpp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lpp181_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4790"/> <fbc:geneProductRef fbc:geneProduct="PP_5226"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AM4PCP" sboTerm="SBO:0000176" id="R_AM4PCP" name="anhydrous_N_Acetylmuramyl_tetrapeptide_L_D_carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AM4PCP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AM4PCP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anhm4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhm3p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4799"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPMS2" sboTerm="SBO:0000176" id="R_AMPMS2" name="4_amino_2_methyl_5_phosphomethylpyrimidine_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AMPMS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPMS2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95826"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_air_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4ampm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ANHMK" sboTerm="SBO:0000176" id="R_ANHMK" name="1_6_anhydrous_N_Acetylmuramate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ANHMK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ANHMK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anhm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acmum6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0434"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ANPRT" sboTerm="SBO:0000176" id="R_ANPRT" name="anthranilate_phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ANPRT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ANPRT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_anth_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pran_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0421"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AOBUTDs" sboTerm="SBO:0000176" id="R_AOBUTDs" name="L_2_amino_3_oxobutanoate_decarboxylation__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AOBUTDs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AOBUTDs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2aobut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AOXHEXCYCL" sboTerm="SBO:0000627" id="R_AOXHEXCYCL" name="6_Amino_2_oxohexanoate_cyclation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AOXHEXCYCL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AOXHEXCYCL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1pipdn2c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AOXSr2" sboTerm="SBO:0000176" id="R_AOXSr2" name="8_amino_7_oxononanoate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AOXSr2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AOXSr2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95855"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pimACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_8aonn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0363"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AP4AH" sboTerm="SBO:0000176" id="R_AP4AH" name="Ap4A_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AP4AH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AP4AH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ap4a_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0399"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APCt5" sboTerm="SBO:0000185" id="R_APCt5" name="Ampicilin__transport_out_via_proton_antiport_TtgABC_system__cytoplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_APCt5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_apc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APCt6" sboTerm="SBO:0000185" id="R_APCt6" name="Ampicilin__transport_out_via_proton_antiport_TtgABC_system__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_APCt6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APCtex" sboTerm="SBO:0000185" id="R_APCtex" name="Ampicilin_transport__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_APCtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_APCtpp" sboTerm="SBO:0000185" id="R_APCtpp" name="Ampicilin_transport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_APCtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_apc_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_APG3PAT120" sboTerm="SBO:0000176" id="R_APG3PAT120" name="acyl_phosphateglycerol_3_phosphate_acyltransferase__C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APG3PAT120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APG3PAT120"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95869"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ddcap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1ddecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0391"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APG3PAT140" sboTerm="SBO:0000176" id="R_APG3PAT140" name="acyl_phosphateglycerol_3_phosphate_acyltransferase__C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APG3PAT140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APG3PAT140"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95870"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdcap_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1tdecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0391"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APG3PAT141" sboTerm="SBO:0000176" id="R_APG3PAT141" name="acyl_phosphateglycerol_3_phosphate_acyltransferase__C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APG3PAT141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APG3PAT141"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95871"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdceap_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1tdec7eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0391"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APG3PAT160" sboTerm="SBO:0000176" id="R_APG3PAT160" name="acyl_phosphateglycerol_3_phosphate_acyltransferase__C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APG3PAT160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APG3PAT160"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95872"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcap_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1hdecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0391"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APG3PAT161" sboTerm="SBO:0000176" id="R_APG3PAT161" name="acyl_phosphateglycerol_3_phosphate_acyltransferase__C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APG3PAT161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APG3PAT161"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95873"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdceap_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1hdec9eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0391"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APG3PAT180" sboTerm="SBO:0000176" id="R_APG3PAT180" name="acyl_phosphateglycerol_3_phosphate_acyltransferase__C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APG3PAT180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APG3PAT180"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95874"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcap_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1odecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0391"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APG3PAT181" sboTerm="SBO:0000176" id="R_APG3PAT181" name="acyl_phosphateglycerol_3_phosphate_acyltransferase__C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APG3PAT181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APG3PAT181"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95875"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdceap_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1odec11eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0391"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APPLDHr" sboTerm="SBO:0000176" id="R_APPLDHr" name="aminopropanol_dehydrogenase_reversible" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APPLDHr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APPLDHr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_APSR" sboTerm="SBO:0000176" id="R_APSR" name="adenosine_5__phosphosulfate_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APSR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APSR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aps_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APSR2" sboTerm="SBO:0000176" id="R_APSR2" name="adenosine_5__phosphosulfate_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_APSR2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aps_c" stoichiometry="1" constant="true"/> <speciesReference species="M_grxrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_grxox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5054"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_2958"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APTNAT" sboTerm="SBO:0000176" id="R_APTNAT" name="5_aminopentanoate2_oxoglutarate_aminotransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APTNAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APTNAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxptn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARBTNR1" sboTerm="SBO:0000176" id="R_ARBTNR1" name="aerobactin_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBTNR1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNR1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_fe3_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arbtn_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ARBTNR2" sboTerm="SBO:0000176" id="R_ARBTNR2" name="aerobactin_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBTNR2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNR2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_fe3_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arbtn_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ARBTNabcpp" sboTerm="SBO:0000185" id="R_ARBTNabcpp" name="aerobactin_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBTNabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_fe3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_arbtn_fe3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> <fbc:geneProductRef fbc:geneProduct="PP_2418"/> </fbc:and> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2593"/> <fbc:geneProductRef fbc:geneProduct="PP_2594"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2592"/> <fbc:geneProductRef fbc:geneProduct="PP_2591"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARBTNexs" sboTerm="SBO:0000176" id="R_ARBTNexs" name="aerobactin_Fe_loading_reaction__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBTNexs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNexs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_e" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arbtn_fe3_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARBTNtex" sboTerm="SBO:0000185" id="R_ARBTNtex" name="aerobactin_secretion__to_extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBTNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arbtn_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ARBTNtonex" sboTerm="SBO:0000185" id="R_ARBTNtonex" name="aerobactin_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBTNtonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNtonex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arbtn_fe3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2193"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARBTNtpp" sboTerm="SBO:0000185" id="R_ARBTNtpp" name="aerobactin_secretion__to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBTNtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arbtn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ARBt3ipp" sboTerm="SBO:0000185" id="R_ARBt3ipp" name="L_arabinose_transport_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARBt3ipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBt3ipp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95937"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arab__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arab__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2428"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGDr" sboTerm="SBO:0000176" id="R_ARGDr" name="Arginine_Deiminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGDr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGDr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_citr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGDC" sboTerm="SBO:0000176" id="R_ARGDC" name="arginine_decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGDC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGDC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_agm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0567"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGDCpp" sboTerm="SBO:0000176" id="R_ARGDCpp" name="arginine_decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGDCpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGDCpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_agm_p" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0567"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGORNt7pp" sboTerm="SBO:0000185" id="R_ARGORNt7pp" name="arginineornithine_antiporter__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGORNt7pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGORNt7pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1002"/> <fbc:geneProductRef fbc:geneProduct="PP_1003"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGSL" sboTerm="SBO:0000176" id="R_ARGSL" name="argininosuccinate_lyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGSL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGSL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_argsuc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGSS" sboTerm="SBO:0000176" id="R_ARGSS" name="argininosuccinate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGSS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGSS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_citr__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_argsuc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1088"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGTRS" sboTerm="SBO:0000176" id="R_ARGTRS" name="Arginyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaarg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_argtrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5089"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGt2pp" sboTerm="SBO:0000185" id="R_ARGt2pp" name="L_lysine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ARGt2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3727"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASNNpp" sboTerm="SBO:0000176" id="R_ASNNpp" name="L_asparaginase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASNNpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASNNpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2453"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASNtex" sboTerm="SBO:0000185" id="R_ASNtex" name="L_asparagine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asn__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ASO3t2pp" sboTerm="SBO:0000185" id="R_ASO3t2pp" name="arsenite_transporter_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ASO3t2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1929"/> <fbc:geneProductRef fbc:geneProduct="PP_2717"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASO3tex" sboTerm="SBO:0000185" id="R_ASO3tex" name="arsenite_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASO3tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASO3tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso3_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ASO4rt2rpp" sboTerm="SBO:0000185" id="R_ASO4rt2rpp" name="arsenate_ireversible_transport_via_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASO4rt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASO4rt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aso4_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1373"/> <fbc:geneProductRef fbc:geneProduct="PP_4103"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASO4tex" sboTerm="SBO:0000185" id="R_ASO4tex" name="Arsenate_transporter__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASO4tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASO4tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aso4_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso4_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ASP3H" sboTerm="SBO:0000176" id="R_ASP3H" name="L_Aspartate_3_hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ASP3H"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hasp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4222"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPK" sboTerm="SBO:0000176" id="R_ASPK" name="aspartate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASPK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4pasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4473"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPTRS" sboTerm="SBO:0000176" id="R_ASPTRS" name="Aspartyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASPTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaasp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asptrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPt2pp" sboTerm="SBO:0000185" id="R_ASPt2pp" name="L_aspartate_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASPt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPtex" sboTerm="SBO:0000185" id="R_ASPtex" name="L_aspartate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASPtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ATPHs" sboTerm="SBO:0000176" id="R_ATPHs" name="ATP_amine_hydrolysis__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ATPHs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPHs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ATPM" sboTerm="SBO:0000176" id="R_ATPM" name="ATP_maintenance_requirement" reversible="false" fast="false" fbc:lowerFluxBound="FB2N1" fbc:upperFluxBound="FB2N1"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ATPM"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPM"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ATPPRT" sboTerm="SBO:0000176" id="R_ATPPRT" name="ATP_phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ATPPRT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPPRT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prbatp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0965"/> <fbc:geneProductRef fbc:geneProduct="PP_4890"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ATPS4rpp" sboTerm="SBO:0000185" id="R_ATPS4rpp" name="ATP_synthase__four_protons_for_one_ATP___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ATPS4rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPS4rpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96137"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="4" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5417"/> <fbc:geneProductRef fbc:geneProduct="PP_5418"/> <fbc:geneProductRef fbc:geneProduct="PP_5419"/> <fbc:geneProductRef fbc:geneProduct="PP_5412"/> <fbc:geneProductRef fbc:geneProduct="PP_5413"/> <fbc:geneProductRef fbc:geneProduct="PP_5414"/> <fbc:geneProductRef fbc:geneProduct="PP_5415"/> <fbc:geneProductRef fbc:geneProduct="PP_5416"/> <fbc:geneProductRef fbc:geneProduct="PP_5420"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAt2pp" sboTerm="SBO:0000185" id="R_BALAt2pp" name="beta_alanine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BALAt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BALAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala_B_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4840"/> <fbc:geneProductRef fbc:geneProduct="PP_0284"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAtex" sboTerm="SBO:0000185" id="R_BALAtex" name="beta_alanine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BALAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BALAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala_B_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BETALDHx" sboTerm="SBO:0000176" id="R_BETALDHx" name="betaine_aldehyde_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BETALDHx"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BETALDHx"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_betald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BETALDHy" sboTerm="SBO:0000176" id="R_BETALDHy" name="betaine_aldehyde_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BETALDHy"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BETALDHy"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_betald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BHBtpp" sboTerm="SBO:0000185" id="R_BHBtpp" name="_R__3_Hydroxybutanoate_transport_via_H_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BHBtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BHBtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bhb_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3074"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BILIVERDtex" sboTerm="SBO:0000185" id="R_BILIVERDtex" name="biliverdin_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BILIVERDtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_biliverd_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_biliverd_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BILIVERDtpp" sboTerm="SBO:0000185" id="R_BILIVERDtpp" name="biliverdin_transport_via_diffusion__periplasm_to_cytoplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BILIVERDtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_biliverd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_biliverd_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BMOGDS1" sboTerm="SBO:0000176" id="R_BMOGDS1" name="bis_molybdopterin_guanine_dinucleotide_synthase__single_GDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BMOGDS1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BMOGDS1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96315"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bmoco_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bmoco1gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3457"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BMOGDS2" sboTerm="SBO:0000176" id="R_BMOGDS2" name="bis_molybdopterin_guanine_dinucleotide_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BMOGDS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BMOGDS2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96316"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bmoco1gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bmocogdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3457"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BTDDtex" sboTerm="SBO:0000185" id="R_BTDDtex" name="butanediol_transporter__external" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BTDDtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btd_RR_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btd_RR_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BTDDtpp" sboTerm="SBO:0000185" id="R_BTDDtpp" name="butanediol__pasive_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BTDDtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btd_RR_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btd_RR_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BTNt2ipp" sboTerm="SBO:0000185" id="R_BTNt2ipp" name="Biotin_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BTNt2ipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BTNt2ipp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BTNtex" sboTerm="SBO:0000185" id="R_BTNtex" name="Biotin_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BTNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BTNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BTS5" sboTerm="SBO:0000176" id="R_BTS5" name="Biotin_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BTS5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BTS5"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96344"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2fe2s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtbt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2fe1s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_btn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dad_5_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0362"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BWCOGDS1" sboTerm="SBO:0000176" id="R_BWCOGDS1" name="tungsten_bispterin_guanine_dinucleotide_synthase__single_GDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BWCOGDS1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BWCOGDS1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96356"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bwco_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bwco1gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3457"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BWCOGDS2" sboTerm="SBO:0000176" id="R_BWCOGDS2" name="tungsten_bispterin_guanine_dinucleotide_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BWCOGDS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BWCOGDS2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96357"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bwco1gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bwcogdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3457"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BZALDH" sboTerm="SBO:0000176" id="R_BZALDH" name="Benzyl_alcohol_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BZALDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BZALDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bzalc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bzal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_128"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BZDH" sboTerm="SBO:0000176" id="R_BZDH" name="Benzaldehyde_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BZDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BZDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bzal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_131"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BZt1pp" sboTerm="SBO:0000185" id="R_BZt1pp" name="Benzoate_proton_symport_periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF 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</rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ca2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ca2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CARBSARAH" sboTerm="SBO:0000176" id="R_CARBSARAH" name="N_carbamoylsarcosine_amidohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CARBSARAH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_Ncarbsar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sarcs_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3941"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CAT23DOX" sboTerm="SBO:0000176" id="R_CAT23DOX" name="catechol_2_3_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CAT23DOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CAT23DOX"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94919"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hmcnsad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CATECHOLtex" sboTerm="SBO:0000185" id="R_CATECHOLtex" name="catechol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CATECHOLtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CATECHOLtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_catechol_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_catechol_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CATECHOLtpp" sboTerm="SBO:0000185" id="R_CATECHOLtpp" name="catechol_transport_via_diffusion___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CATECHOLtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CATECHOLtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_catechol_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CAt6pp" sboTerm="SBO:0000185" id="R_CAt6pp" name="calcium__sodium_antiporter__11_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CAt6pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CAt6pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ca2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ca2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0928"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBItonex" sboTerm="SBO:0000185" id="R_CBItonex" name="Cobinamide_transport_via_ton_system__extermal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBItonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBItonex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96468"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cbi_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cbi_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0525"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBIuabcpp" sboTerm="SBO:0000185" id="R_CBIuabcpp" name="Cobinamide_transport_via_ABC_system__uptake__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBIuabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBIuabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbi_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0524"/> <fbc:geneProductRef fbc:geneProduct="PP_4687"/> <fbc:geneProductRef fbc:geneProduct="PP_4688"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0524"/> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBL1abcpp" sboTerm="SBO:0000185" id="R_CBL1abcpp" name="Cob_1_alamin_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBL1abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBL1abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbl1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbl1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0524"/> <fbc:geneProductRef fbc:geneProduct="PP_4687"/> <fbc:geneProductRef fbc:geneProduct="PP_4688"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0524"/> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBL1tonex" sboTerm="SBO:0000185" id="R_CBL1tonex" name="Cob_1_alamin_transport_via_ton_system__extermal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBL1tonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBL1tonex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96472"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cbl1_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cbl1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0525"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBMKr" sboTerm="SBO:0000176" id="R_CBMKr" name="Carbamate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBMKr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBMKr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0999"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBPAH" sboTerm="SBO:0000176" id="R_CBPAH" name="N_carbamoylputrescine_amidohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBPAH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBPAH"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96483"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_Ncbmpts_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5340"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBPS" sboTerm="SBO:0000176" id="R_CBPS" name="carbamoyl_phosphate_synthase__glutamine_hydrolysing_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cbp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4723"/> <fbc:geneProductRef fbc:geneProduct="PP_4724"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CCGS" sboTerm="SBO:0000176" id="R_CCGS" name="7_cyano_7_carbaguanine_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CCGS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CCGS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cdg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_preq0_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1226"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CCPpp" sboTerm="SBO:0000185" id="R_CCPpp" name="Cytochrome_c_peroxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CCPpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_focytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2943"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CD2t3pp" sboTerm="SBO:0000185" id="R_CD2t3pp" name="cadmium__Cd2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CD2t3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CD2t3pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cd2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CD2t4pp" sboTerm="SBO:0000185" id="R_CD2t4pp" name="cadmium__Cd2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CD2t4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CD2t4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cd2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0026"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CD2t5" sboTerm="SBO:0000185" id="R_CD2t5" name="cadmium__Cd2__transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CD2t5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cd2_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0043"/> <fbc:geneProductRef fbc:geneProduct="PP_0044"/> <fbc:geneProductRef fbc:geneProduct="PP_0045"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CD2t6" sboTerm="SBO:0000185" id="R_CD2t6" name="cadmium__Cd2__transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CD2t6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cd2_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0043"/> <fbc:geneProductRef fbc:geneProduct="PP_0044"/> <fbc:geneProductRef fbc:geneProduct="PP_0045"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CD2tex" sboTerm="SBO:0000185" id="R_CD2tex" name="cadmium__Cd2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CD2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CD2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cd2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CD2tpp" sboTerm="SBO:0000185" id="R_CD2tpp" name="cadmium__2__transport_in_via_permease__no_H_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CD2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CD2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cd2_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CDGR" sboTerm="SBO:0000176" id="R_CDGR" name="7_cyano_7_deazaguanine_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CDGR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CDGR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/> <speciesReference species="M_preq0_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_preq1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2160"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CDPMEK" sboTerm="SBO:0000176" id="R_CDPMEK" name="4__cytidine_5__diphospho__2_C_methyl_D_erythritol_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CDPMEK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CDPMEK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4c2me_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2p4c2me_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0723"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CELLex" sboTerm="SBO:0000185" id="R_CELLex" name="Cellulose_export_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CELLex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cell4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cell4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CHLtex" sboTerm="SBO:0000185" id="R_CHLtex" name="choline_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CHLtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHLtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chol_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CHOLD" sboTerm="SBO:0000176" id="R_CHOLD" name="choline_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CHOLD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHOLD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_betald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5064"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHOLS_ex_" sboTerm="SBO:0000185" id="R_CHOLS_ex_" name="Choline_sulfate_transport_difusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CHOLS_ex_"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chols_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chols_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CHOLSabc" sboTerm="SBO:0000185" id="R_CHOLSabc" name="Choline_sulfate_ABC_transporter" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CHOLSabc"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHOLSabc"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_chols_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_chols_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0075"/> <fbc:geneProductRef fbc:geneProduct="PP_0076"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHOLt4ipp" sboTerm="SBO:0000185" id="R_CHOLt4ipp" name="choline__sodium_cotransport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CHOLt4ipp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chol_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5061"/> <fbc:geneProductRef fbc:geneProduct="PP_0229"/> <fbc:geneProductRef fbc:geneProduct="PP_3957"/> <fbc:geneProductRef fbc:geneProduct="PP_5374"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHORS" sboTerm="SBO:0000176" id="R_CHORS" name="chorismate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CHORS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHORS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3psme_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1830"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHORt2rpp" sboTerm="SBO:0000185" id="R_CHORt2rpp" name="Chorismate_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CHORt2rpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chor_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CHORtex" sboTerm="SBO:0000185" id="R_CHORtex" name="Chorismate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CHORtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chor_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chor_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CHRPL" sboTerm="SBO:0000176" id="R_CHRPL" name="Chorismate_pyruvate_lyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CHRPL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHRPL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5317"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CINNMCOAH" sboTerm="SBO:0000176" id="R_CINNMCOAH" name="Cinnamoyl_CoA_Hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CINNMCOAH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cinmcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cinnm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CINNMtex" sboTerm="SBO:0000185" id="R_CINNMtex" name="Cinnamic_acid_transport__diffusion__extra_organism_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CINNMtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cinnm_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cinnm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CINNMtpp" sboTerm="SBO:0000185" id="R_CINNMtpp" name="Cinnamic_acid_transport__diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CINNMtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cinnm_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cinnm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CITt4pp" sboTerm="SBO:0000185" id="R_CITt4pp" name="citrate_transport_via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CITt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CITt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1416"/> <fbc:geneProductRef fbc:geneProduct="PP_1417"/> <fbc:geneProductRef fbc:geneProduct="PP_1418"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CITt_kt" sboTerm="SBO:0000185" id="R_CITt_kt" name="citrate_transport_in_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CITt_kt"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CITt_kt"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2703"/> <fbc:geneProductRef fbc:geneProduct="PP_2057"/> <fbc:geneProductRef fbc:geneProduct="PP_0147"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNH120pp" sboTerm="SBO:0000176" id="R_CLPNH120pp" name="cardiolipin_hydrolase__periplasm__n_C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLPNH120pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH120pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96774"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_clpn120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg120_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CLPNH140pp" sboTerm="SBO:0000176" id="R_CLPNH140pp" name="cardiolipin_hydrolase__periplasm__n_C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLPNH140pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH140pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96775"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_clpn140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pa140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg140_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CLPNH141pp" sboTerm="SBO:0000176" id="R_CLPNH141pp" name="cardiolipin_hydrolase__periplasm__n_C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLPNH141pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH141pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96776"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_clpn141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pa141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg141_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CLPNH160pp" sboTerm="SBO:0000176" id="R_CLPNH160pp" name="cardiolipin_hydrolase__periplasm__n_C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLPNH160pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH160pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_clpn160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg160_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CLPNH161pp" sboTerm="SBO:0000176" id="R_CLPNH161pp" name="cardiolipin_hydrolase__periplasm__n_C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLPNH161pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH161pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96778"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_clpn161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CLPNH180pp" sboTerm="SBO:0000176" id="R_CLPNH180pp" name="cardiolipin_hydrolase__periplasm__n_C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLPNH180pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH180pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96779"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_clpn180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CLPNH181pp" sboTerm="SBO:0000176" id="R_CLPNH181pp" name="cardiolipin_hydrolase__periplasm__n_C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLPNH181pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH181pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96780"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_clpn181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CLt3_2pp" sboTerm="SBO:0000185" id="R_CLt3_2pp" name="chloride_transport_out_via_proton_antiport__21___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLt3_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLt3_2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cl_p" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cl_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3959"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLtex" sboTerm="SBO:0000185" id="R_CLtex" name="chloride__Cl_1__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CLtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104461"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cl_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cl_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CMCBTFR1" sboTerm="SBO:0000176" id="R_CMCBTFR1" name="carboxymycobactin_reductase__fadh_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMCBTFR1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fcmcbtt_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmcbtt_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" 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<rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fcmcbtt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fcmcbtt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2593"/> <fbc:geneProductRef fbc:geneProduct="PP_2594"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2592"/> <fbc:geneProductRef fbc:geneProduct="PP_2591"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> <fbc:geneProductRef fbc:geneProduct="PP_2418"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CMCBTFexs" sboTerm="SBO:0000176" id="R_CMCBTFexs" name="carboxymycobactin_Fe_loading_reaction__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMCBTFexs"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CMCBTFtex" sboTerm="SBO:0000185" id="R_CMCBTFtex" name="carboxymycobactin_secretion__to_extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMCBTFtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cmcbtt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CMCBTFtonex" sboTerm="SBO:0000185" id="R_CMCBTFtonex" name="carboxymycobactin_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMCBTFtonex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fcmcbtt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2590"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CMCBTFtpp" sboTerm="SBO:0000185" id="R_CMCBTFtpp" name="carboxymycobactin_secretion__to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMCBTFtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cmcbtt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmcbtt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CMt2ex" sboTerm="SBO:0000185" id="R_CMt2ex" name="Chloramphenicol_extrusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMt2ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CMt2ppi" sboTerm="SBO:0000185" id="R_CMt2ppi" name="Chloramphenicol_transport_via_diffusion__periplasm_to_cytosol_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMt2ppi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cm_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CMtex" sboTerm="SBO:0000185" id="R_CMtex" name="Chloramphenicol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CMtexabc" sboTerm="SBO:0000185" id="R_CMtexabc" name="Chloramphenicol_extrusion_via_ABC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CMtexabc"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2669"/> <fbc:geneProductRef fbc:geneProduct="PP_2668"/> <fbc:geneProductRef fbc:geneProduct="PP_2667"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CMtpp" sboTerm="SBO:0000185" id="R_CMtpp" name="Chloramphenicol_transport_via_TolC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CMtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CMtpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96809"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cm_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CO2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CO2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CO2tpp" sboTerm="SBO:0000185" id="R_CO2tpp" name="CO2_transporter_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CO2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CO2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> 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id="R_COBALT2tex" name="cobalt__Co2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_COBALT2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/COBALT2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cobalt2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cobalt2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_COBALT2tpp" sboTerm="SBO:0000185" id="R_COBALT2tpp" name="cobalt_transport_in_via_permease__no_H_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_COBALT2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/COBALT2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cobalt2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cobalt2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2955"/> <fbc:geneProductRef fbc:geneProduct="PP_1843"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_COBALTt4pp" sboTerm="SBO:0000185" id="R_COBALTt4pp" name="cobalt_transport_out_via_proton_antiporter__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_COBALTt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/COBALTt4pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96822"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cobalt2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cobalt2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0026"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_COLIPAabcpp_kt" sboTerm="SBO:0000185" id="R_COLIPAabcpp_kt" name="core_oligosaccharide_lipid_A_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_COLIPAabcpp_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpscore_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpscore_kt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CONFRLtex" sboTerm="SBO:0000185" id="R_CONFRLtex" name="conyferyl_alcohol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CONFRLtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CONFRLtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_confrl_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_confrl_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CONFRLtpp" sboTerm="SBO:0000185" id="R_CONFRLtpp" name="conyferyl_alcohol_transport_via_diffusion___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CONFRLtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CONFRLtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_confrl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_confrl_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_COtex" sboTerm="SBO:0000185" id="R_COtex" name="CO_transporter_via_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_COtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96764"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_co_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_COtpp" sboTerm="SBO:0000185" id="R_COtpp" name="CO_transporter_via_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_COtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_co_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CPMPS" sboTerm="SBO:0000176" id="R_CPMPS" name="cyclic_pyranopterin_monophosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CPMPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CPMPS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96877"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cpmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1969"/> <fbc:geneProductRef fbc:geneProduct="PP_1292"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2482"/> <fbc:geneProductRef fbc:geneProduct="PP_1292"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4597"/> <fbc:geneProductRef fbc:geneProduct="PP_1292"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CPPPGO" sboTerm="SBO:0000176" id="R_CPPPGO" name="coproporphyrinogen_oxidase__O2_required_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CPPPGO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CPPPGO"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96882"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cpppg3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pppg9_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0073"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CREATtex" sboTerm="SBO:0000185" id="R_CREATtex" name="Creatine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CREATtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_creat_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_creat_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CREATtpp" sboTerm="SBO:0000185" id="R_CREATtpp" name="Creatine_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CREATtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_creat_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_creat_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3666"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRNDH" sboTerm="SBO:0000176" id="R_CRNDH" name="carnitine_3_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRNDH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference 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xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CRNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CRNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_crn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_crn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CRO2t3pp" sboTerm="SBO:0000185" id="R_CRO2t3pp" name="chromite_transport_out_via_proton_antiport__cytoplasm_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRO2t3pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cro2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2556"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRO2tex" sboTerm="SBO:0000185" id="R_CRO2tex" name="cromite_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRO2tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cro2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CRO2tpp" sboTerm="SBO:0000185" id="R_CRO2tpp" name="chromite_transport___periplasm_to__cytoplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRO2tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cro2_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CRO4Rx" sboTerm="SBO:0000176" id="R_CRO4Rx" name="Chromate_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRO4Rx"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cro2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2s_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4138"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRO4Ry" sboTerm="SBO:0000176" id="R_CRO4Ry" name="Chromate_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRO4Ry"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cro2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2s_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4138"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRO4abcpp" sboTerm="SBO:0000185" id="R_CRO4abcpp" name="chromate_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CRO4abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CRO4abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96912"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cro4_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cro4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> <fbc:geneProductRef fbc:geneProduct="PP_4305"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRO4t3pp" sboTerm="SBO:0000185" id="R_CRO4t3pp" name="chromate_transport_out_via_proton_antiport__cytoplasm_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CRO4t3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CRO4t3pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cro4_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2556"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRO4tex" sboTerm="SBO:0000185" id="R_CRO4tex" name="cromate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CRO4tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CRO4tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro4_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cro4_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CRTNtex" sboTerm="SBO:0000185" id="R_CRTNtex" name="Creatinine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRTNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_crtn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_crtn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CRTNtpp" sboTerm="SBO:0000185" id="R_CRTNtpp" name="Cretinine_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRTNtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_crtn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_crtn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CS" sboTerm="SBO:0000176" id="R_CS" name="citrate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94779"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4194"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CSNt2pp" sboTerm="SBO:0000185" id="R_CSNt2pp" name="cytosine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CSNt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CSNt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_csn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_csn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3187"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CSNtex" sboTerm="SBO:0000185" id="R_CSNtex" name="cytosine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CSNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CSNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_csn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_csn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CSPMDDH" sboTerm="SBO:0000176" id="R_CSPMDDH" name="carboxyspermidine_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CSPMDDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CSPMDDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cspmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2928"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CTI1" sboTerm="SBO:0000176" id="R_CTI1" name="cis_trans_enoyl_CoA_isomerase__cis_tetradec_2_enoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CTI1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tde_2Z_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CTPS2" sboTerm="SBO:0000176" id="R_CTPS2" name="CTP_synthase__glutamine_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CTPS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CTPS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1610"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CU2t4pp" sboTerm="SBO:0000185" id="R_CU2t4pp" name="Copper__Cu2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CU2t4pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0026"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CU2tex" sboTerm="SBO:0000185" id="R_CU2tex" name="copper__Cu2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CU2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CU2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CU2tonex" sboTerm="SBO:0000185" id="R_CU2tonex" name="cupper_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CU2tonex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4838"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CU2tpp" sboTerm="SBO:0000185" id="R_CU2tpp" name="copper_transport_in_via_permease__no_H_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CU2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CU2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CUt3" sboTerm="SBO:0000185" id="R_CUt3" name="copper_transport_out_via_proton_antiport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CUt3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CUt3"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96953"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5385"/> <fbc:geneProductRef fbc:geneProduct="PP_5386"/> <fbc:geneProductRef fbc:geneProduct="PP_5387"/> <fbc:geneProductRef fbc:geneProduct="PP_5388"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CUtex" sboTerm="SBO:0000185" id="R_CUtex" name="copper__Cu1__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CUtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CUtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96954"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CUtpp" sboTerm="SBO:0000185" id="R_CUtpp" name="copper_transport_in_via_permease__no_H_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CUtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYANt2pp" sboTerm="SBO:0000185" id="R_CYANt2pp" name="Cyanate_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CYANt2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cyan_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3751"/> <fbc:geneProductRef fbc:geneProduct="PP_0970"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYANtex" sboTerm="SBO:0000185" id="R_CYANtex" name="Cyanide_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYANtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYANtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cyan_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYO4pp" sboTerm="SBO:0000185" id="R_CYO4pp" name="cytochrome_c_reductase__pqq_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CYO4pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_focytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2675"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYSDS" sboTerm="SBO:0000176" id="R_CYSDS" name="Cysteine_Desulfhydrase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSDS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSDS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96995"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYSDabcpp" sboTerm="SBO:0000185" id="R_CYSDabcpp" name="D_cysteine_uptake_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSDabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSDabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYSDtex" sboTerm="SBO:0000185" id="R_CYSDtex" name="D_cysteine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYSSADS" sboTerm="SBO:0000176" id="R_CYSSADS" name="L_cysteine_sulfinic_acid_desulfurase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSSADS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSSADS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3sala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1529"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYSTGL" sboTerm="SBO:0000176" id="R_CYSTGL" name="cystathionine_g_lyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSTGL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSTGL"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97013"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cyst__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4594"/> <fbc:geneProductRef fbc:geneProduct="PP_0659"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYSTL" sboTerm="SBO:0000176" id="R_CYSTL" name="cystathionine_b_lyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSTL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSTL"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97016"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cyst__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYSTRS" sboTerm="SBO:0000176" id="R_CYSTRS" name="Cysteinyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnacys_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cystrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2905"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYSTS" sboTerm="SBO:0000176" id="R_CYSTS" name="cystathionine_beta_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSTS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSTS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97020"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cyst__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0658"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYSabcpp" sboTerm="SBO:0000185" id="R_CYSabcpp" name="L_cysteine_uptake_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0225"/> <fbc:geneProductRef fbc:geneProduct="PP_0227"/> <fbc:geneProductRef fbc:geneProduct="PP_0226"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYStex" sboTerm="SBO:0000185" id="R_CYStex" name="L_cysteine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYStex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYStex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYStpp" sboTerm="SBO:0000185" id="R_CYStpp" name="L_cysteine_export_via_facilitated_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYStpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYStpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2872"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTBDpp" sboTerm="SBO:0000185" id="R_CYTBDpp" name="cytochrome_oxidase_bd__ubiquinol_8_2_protons___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYTBDpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYTBDpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97033"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4650"/> <fbc:geneProductRef fbc:geneProduct="PP_4651"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTK1" sboTerm="SBO:0000176" id="R_CYTK1" name="cytidylate_kinase__CMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYTK1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYTK1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97048"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1771"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTK2" sboTerm="SBO:0000176" id="R_CYTK2" name="cytidylate_kinase__dCMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYTK2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYTK2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97054"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1771"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAAD" sboTerm="SBO:0000176" id="R_DAAD" name="D_Amino_acid_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DAAD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DAAD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4434"/> <fbc:geneProductRef fbc:geneProduct="PP_5270"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAAD8" sboTerm="SBO:0000176" id="R_DAAD8" name="D_Amino_acid_dehydrogenase__ser_D_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DAAD8"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5270"/> <fbc:geneProductRef fbc:geneProduct="PP_4434"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DADA" sboTerm="SBO:0000176" id="R_DADA" name="Deoxyadenosine_deaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DADA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DADA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dad_2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_din_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0591"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DADK" sboTerm="SBO:0000176" id="R_DADK" name="deoxyadenylate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DADK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DADK"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97077"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_damp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGLIPA160ex" sboTerm="SBO:0000176" id="R_DAGLIPA160ex" name="Diacyl_sn_glycerol_lipase__extracellular_hexadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DAGLIPA160ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_12dgr160_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1ag160_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGLIPA180ex" sboTerm="SBO:0000176" id="R_DAGLIPA180ex" name="Diacyl_sn_glycerol_lipase__extracellular_octadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DAGLIPA180ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_12dgr180_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1ag180_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGLIPA181d9ex" sboTerm="SBO:0000176" id="R_DAGLIPA181d9ex" name="Diacyl_sn_glycerol_lipase__extracellular_nC181d9_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DAGLIPA181d9ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dag181d9_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1ag181d9_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcea_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGLIPA182d9d12ex" sboTerm="SBO:0000176" id="R_DAGLIPA182d9d12ex" name="Diacyl_sn_glycerol_lipase__extracellular_nC181d9d12_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DAGLIPA182d9d12ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dag182d9d12_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1ag182d9d12_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DALAALAD" sboTerm="SBO:0000176" id="R_DALAALAD" name="beta_alanine_L_alanine_dipeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DALAALAD"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DALADALAD" sboTerm="SBO:0000176" id="R_DALADALAD" name="beta_alanine_beta_alanine_dipeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DALADALAD"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balabala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DALAGLYD" sboTerm="SBO:0000176" id="R_DALAGLYD" name="beta_alanine_L_glycine_dipeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DALAGLYD"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balagly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DALALEUD" sboTerm="SBO:0000176" id="R_DALALEUD" name="beta_alanine_L_leucine_dipeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DALALEUD"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DALAabcpp" sboTerm="SBO:0000185" id="R_DALAabcpp" name="D_alanine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DALAabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DALAabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4863"/> <fbc:geneProductRef fbc:geneProduct="PP_4864"/> <fbc:geneProductRef fbc:geneProduct="PP_4866"/> <fbc:geneProductRef fbc:geneProduct="PP_4867"/> <fbc:geneProductRef fbc:geneProduct="PP_4865"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DALAt2pp" sboTerm="SBO:0000185" id="R_DALAt2pp" name="D_alanine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DALAt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DALAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4840"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DALAtex" sboTerm="SBO:0000185" id="R_DALAtex" name="D_Alanine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DALAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DALAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAPAT" sboTerm="SBO:0000176" id="R_DAPAT" name="Cadaverine_aminotranferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DAPAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DAPAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pprdn_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAPabcpp" sboTerm="SBO:0000185" id="R_DAPabcpp" name="M_diaminopimelic_acid_ABC_transport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DAPabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DAPabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_26dap__M_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_26dap__M_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAPtex" sboTerm="SBO:0000185" id="R_DAPtex" name="1_5_Diaminopentane_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DAPtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DAPtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_15dap_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_15dap_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DARGabcpp" sboTerm="SBO:0000185" id="R_DARGabcpp" name="D_arginine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DARGabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_arg__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DARGtex" sboTerm="SBO:0000185" id="R_DARGtex" name="D_arginine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DARGtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DASNabcpp" sboTerm="SBO:0000185" id="R_DASNabcpp" name="D_asparagine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DASNabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asn__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> 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id="R_DATPHs" name="dATP_amine_hydrolysis__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DATPHs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DATPHs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_datp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DCAtex" sboTerm="SBO:0000185" id="R_DCAtex" name="Decanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DCAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DCAtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97211"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dca_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DCTPD" sboTerm="SBO:0000176" id="R_DCTPD" name="dCTP_deaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DCTPD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DCTPD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dutp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DCTPD2" sboTerm="SBO:0000176" id="R_DCTPD2" name="dCTP_deaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DCTPD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DCTPD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DDCAtexi" sboTerm="SBO:0000185" id="R_DDCAtexi" name="Fatty_acid__dodecanoate__transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DDCAtexi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DDCAtexi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97211"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ddca_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ddca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DGBUTNH" sboTerm="SBO:0000176" id="R_DGBUTNH" name="1_4_diguanidinobutane_amidinohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DGBUTNH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dgudbutn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_agm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DGK1" sboTerm="SBO:0000176" id="R_DGK1" name="deoxyguanylate_kinase__dGMPATP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DGK1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DGK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5296"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DGUDBUTNabcpp" sboTerm="SBO:0000185" id="R_DGUDBUTNabcpp" name="1_4_Diguanidinobutane_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DGUDBUTNabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgudbutn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgudbutn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DGUDBUTNtex" sboTerm="SBO:0000185" id="R_DGUDBUTNtex" name="1_4_Diguanidinobutane_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DGUDBUTNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dgudbutn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgudbutn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DH3MCHCDH" sboTerm="SBO:0000176" id="R_DH3MCHCDH" name="1_2_dihydrodihydroxybenzoate_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DH3MCHCDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DH3MCHCDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dh3mchc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mcat_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_099"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DH4MCHCDH" sboTerm="SBO:0000176" id="R_DH4MCHCDH" name="1_2_dihydrodihydroxybenzoate_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DH4MCHCDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DH4MCHCDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dh4mchc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mcat_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_099"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHAD1" sboTerm="SBO:0000176" id="R_DHAD1" name="dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylbutanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHAD1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHAD1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_23dhmb_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5128"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHAD2" sboTerm="SBO:0000176" id="R_DHAD2" name="Dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylpentanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHAD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHAD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_23dhmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5128"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHDPRy" sboTerm="SBO:0000176" id="R_DHDPRy" name="dihydrodipicolinate_reductase__NADPH_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHDPRy"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHDPRy"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97393"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_23dhdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4725"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHORD2" sboTerm="SBO:0000176" id="R_DHORD2" name="dihydoorotic_acid_dehydrogenase__quinone8_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHORD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHORD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dhor__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orot_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2095"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHORDfum" sboTerm="SBO:0000176" id="R_DHORDfum" name="Fumarate_dependent_DHORD" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHORDfum"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHORDfum"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dhor__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orot_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2095"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHORTS" sboTerm="SBO:0000176" id="R_DHORTS" name="dihydroorotase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHORTS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHORTS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dhor__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cbasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1086"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHQS" sboTerm="SBO:0000176" id="R_DHQS" name="3_dehydroquinate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHQS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHQS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2dda7p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5078"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHSKDH" sboTerm="SBO:0000176" id="R_DHSKDH" name="dehydroshikimate_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHSKDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHSKDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2554"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLASNR" sboTerm="SBO:0000176" id="R_DLASNR" name="Asparagine_racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLASNR"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asn__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLCYSR" sboTerm="SBO:0000176" id="R_DLCYSR" name="Cysteine_racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLCYSR"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLEUabcpp" sboTerm="SBO:0000185" id="R_DLEUabcpp" name="D_leucine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLEUabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DLEUtex" sboTerm="SBO:0000185" id="R_DLEUtex" name="D_leucine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLEUtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_leu__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_leu__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DLMETR" sboTerm="SBO:0000176" id="R_DLMETR" name="Methionine_racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLMETR"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_met__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMETtex" sboTerm="SBO:0000185" id="R_DMETtex" name="D_methionine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DMETtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_met__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_met__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DMGLYtex" sboTerm="SBO:0000185" id="R_DMGLYtex" name="Dimethylglycine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DMGLYtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmgly_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmgly_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DMPPS" sboTerm="SBO:0000176" id="R_DMPPS" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__dmpp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DMPPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMPPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2mb4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0606"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMQMT" sboTerm="SBO:0000176" id="R_DMQMT" name="3_Dimethylubiquinonol_3_methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DMQMT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMQMT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2omhmbl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1765"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DM_5drib_c" sboTerm="SBO:0000628" id="R_DM_5drib_c" name="Sink_needed_to_allow_5__deoxyribose_to_leave_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DM_5drib_c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DM_5drib_c"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97542"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5drib_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_amob_c" sboTerm="SBO:0000628" id="R_DM_amob_c" name="Sink_needed_to_allow_S_Adenosyl_4_methylthio_2_oxobutanoate_to_leave_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DM_amob_c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DM_amob_c"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97556"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amob_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C100aPHA" sboTerm="SBO:0000628" id="R_DM_C100aPHA" name="C100aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C100aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C100aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C100pPHA" sboTerm="SBO:0000628" id="R_DM_C100pPHA" name="C100pPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C100pPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C100pPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C101PHA" sboTerm="SBO:0000628" id="R_DM_C101PHA" name="C101PHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C101PHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C101PAH_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C120aPHA" sboTerm="SBO:0000628" id="R_DM_C120aPHA" name="C120aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C120aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C120aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C121aPHA" sboTerm="SBO:0000628" id="R_DM_C121aPHA" name="C121aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C121aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C121aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C121d6PHA" sboTerm="SBO:0000628" id="R_DM_C121d6PHA" name="C121d6PHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C121d6PHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C121d6PHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C140aPHA" sboTerm="SBO:0000628" id="R_DM_C140aPHA" name="C140aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C140aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C140aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C141aPHA" sboTerm="SBO:0000628" id="R_DM_C141aPHA" name="C121d6PHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C141aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C141aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C141d5PHA" sboTerm="SBO:0000628" id="R_DM_C141d5PHA" name="C141d5PHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C141d5PHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C141d5PHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C142PHA" sboTerm="SBO:0000628" id="R_DM_C142PHA" name="C142PHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C142PHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C142PHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C40aPHA" sboTerm="SBO:0000628" id="R_DM_C40aPHA" name="C40aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C40aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C40aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C40atPHA" sboTerm="SBO:0000628" id="R_DM_C40atPHA" name="C40atPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C40atPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C40atPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C40pPHA" sboTerm="SBO:0000628" id="R_DM_C40pPHA" name="C40pPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C40pPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C40pPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C50aPHA" sboTerm="SBO:0000628" id="R_DM_C50aPHA" name="C50aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C50aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C50aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C50pPHA" sboTerm="SBO:0000628" id="R_DM_C50pPHA" name="C50pPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C50pPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C50pPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C60aPHA" sboTerm="SBO:0000628" id="R_DM_C60aPHA" name="C60aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C60aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C60aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C60atPHA" sboTerm="SBO:0000628" id="R_DM_C60atPHA" name="C60atPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C60atPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C60atPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C60pPHA" sboTerm="SBO:0000628" id="R_DM_C60pPHA" name="C60pPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C60pPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C60pPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C70aPHA" sboTerm="SBO:0000628" id="R_DM_C70aPHA" name="C70aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C70aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C70aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C70pPHA" sboTerm="SBO:0000628" id="R_DM_C70pPHA" name="C70pPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C70pPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C70pPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C80aPHA" sboTerm="SBO:0000628" id="R_DM_C80aPHA" name="C80aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C80aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C80aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C80pPHA" sboTerm="SBO:0000628" id="R_DM_C80pPHA" name="C80pPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C80pPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C80pPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C90aPHA" sboTerm="SBO:0000628" id="R_DM_C90aPHA" name="C90aPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C90aPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C90aPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_C90pPHA" sboTerm="SBO:0000628" id="R_DM_C90pPHA" name="C90pPHA_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C90pPHA"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_C90pPHA_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM__acmum6p" sboTerm="SBO:0000628" id="R_DM__acmum6p" name="DM__acmum6p_c_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM__acmum6p"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acmum6p_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM__ppi50" sboTerm="SBO:0000628" id="R_DM__ppi50" name="DM__ppi50" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM__ppi50"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ppi50_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_acgam" sboTerm="SBO:0000628" id="R_DM_acgam" name="DM__acgam" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_acgam"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_doxopa" sboTerm="SBO:0000628" id="R_DM_doxopa" name="DM_doxopa" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_doxopa"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_doxopa_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DM_tripeptide_c_" sboTerm="SBO:0000628" id="R_DM_tripeptide_c_" name="tripeptide_demand" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_tripeptide_c_"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tripeptide_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_DNMPPA" sboTerm="SBO:0000176" id="R_DNMPPA" name="Dihydroneopterin_monophosphate_dephosphorylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DNMPPA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DNMPPA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dhpmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhnpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DNTAep" sboTerm="SBO:0000185" id="R_DNTAep" name="N_N_bis_3_5_dinitrotolyl__amine_extrusion_pump" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DNTAep"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_35dnta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35dnta_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3425"/> <fbc:geneProductRef fbc:geneProduct="PP_3426"/> <fbc:geneProductRef fbc:geneProduct="PP_3427"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DNTPPA" sboTerm="SBO:0000176" id="R_DNTPPA" name="Dihydroneopterin_triphosphate_pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DNTPPA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DNTPPA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ahdt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhpmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DOPAtex" sboTerm="SBO:0000185" id="R_DOPAtex" name="dopamine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DOPAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DOPAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dopa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dopa_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DOPAtpp" sboTerm="SBO:0000185" id="R_DOPAtpp" name="DOPA_transport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DOPAtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dopa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dopa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DORNtex" sboTerm="SBO:0000185" id="R_DORNtex" name="D_ornithine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DORNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orn__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orn__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DPCOAK" sboTerm="SBO:0000176" id="R_DPCOAK" name="dephospho_CoA_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DPCOAK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DPCOAK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dpcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0631"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DPHEt2rpp" sboTerm="SBO:0000185" id="R_DPHEt2rpp" name="D_phenylalanine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DPHEt2rpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__D_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DPHEtex" sboTerm="SBO:0000185" id="R_DPHEtex" name="D_phenylalanine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DPHEtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phe__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phe__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DPROabcpp" sboTerm="SBO:0000185" id="R_DPROabcpp" name="D_proline_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DPROabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__D_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DPROtex" sboTerm="SBO:0000185" id="R_DPROtex" name="D_proline_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DPROtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pro__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pro__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DSBAO1" sboTerm="SBO:0000185" id="R_DSBAO1" name="DsbA_protein_reoxidation_reaction__aerobic_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DSBAO1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSBAO1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dsbard_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbaox_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0127"/> <fbc:geneProductRef fbc:geneProduct="PP_0190"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0127"/> <fbc:geneProductRef fbc:geneProduct="PP_0809"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBCGT" sboTerm="SBO:0000176" id="R_DSBCGT" name="DsbCglutathione_thiotransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DSBCGT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSBCGT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dsbcox_p" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_p" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbcrd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1469"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBGGT" sboTerm="SBO:0000176" id="R_DSBGGT" name="DsbGglutathione_thiotransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DSBGGT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSBGGT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dsbgox_p" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_p" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbgrd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4237"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSERt2pp" sboTerm="SBO:0000185" id="R_DSERt2pp" name="D_serine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DSERt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSERt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4840"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSERtex" sboTerm="SBO:0000185" id="R_DSERtex" name="D_serine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DSERtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ser__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ser__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DTMPK" sboTerm="SBO:0000176" id="R_DTMPK" name="dTMP_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DTMPK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DTMPK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtdp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DTYRt2rpp" sboTerm="SBO:0000185" id="R_DTYRt2rpp" name="D_tyrosine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DTYRt2rpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__D_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DTYRtex" sboTerm="SBO:0000185" id="R_DTYRtex" name="D_tyrosine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DTYRtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tyr__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tyr__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DUTPDP" sboTerm="SBO:0000176" id="R_DUTPDP" name="dUTP_diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DUTPDP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DUTPDP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dutp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dump_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5286"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DVALabcpp" sboTerm="SBO:0000185" id="R_DVALabcpp" name="D_valine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DVALabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4863"/> <fbc:geneProductRef fbc:geneProduct="PP_4864"/> <fbc:geneProductRef fbc:geneProduct="PP_4866"/> <fbc:geneProductRef fbc:geneProduct="PP_4867"/> <fbc:geneProductRef fbc:geneProduct="PP_4865"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DVALtex" sboTerm="SBO:0000185" id="R_DVALtex" name="D_valine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DVALtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_val__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_val__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DXPRIi" sboTerm="SBO:0000176" id="R_DXPRIi" name="1_deoxy_D_xylulose_reductoisomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DXPRIi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DXPRIi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dxyl5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2me4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1597"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DXPS" sboTerm="SBO:0000176" id="R_DXPS" name="1_deoxy_D_xylulose_5_phosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DXPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DXPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dxyl5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0527"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_D_LACt2pp" sboTerm="SBO:0000185" id="R_D_LACt2pp" name="D_lactate_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_D_LACt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/D_LACt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_D_LACtex" sboTerm="SBO:0000185" id="R_D_LACtex" name="D_lactate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_D_LACtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/D_LACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lac__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lac__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR100y" sboTerm="SBO:0000176" id="R_EAR100y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C100_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR100y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR100y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97846"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdec2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR120y" sboTerm="SBO:0000176" id="R_EAR120y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR120y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR120y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97848"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tddec2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR121y" sboTerm="SBO:0000176" id="R_EAR121y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C121_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR121y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR121y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97850"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c5ddeceACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cddec5eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR140y" sboTerm="SBO:0000176" id="R_EAR140y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR140y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR140y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97852"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tmrs2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR141y" sboTerm="SBO:0000176" id="R_EAR141y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR141y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR141y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97854"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c7mrseACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR160y" sboTerm="SBO:0000176" id="R_EAR160y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR160y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR160y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97856"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tpalm2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR161y" sboTerm="SBO:0000176" id="R_EAR161y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR161y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR161y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97858"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c9palmeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR180y" sboTerm="SBO:0000176" id="R_EAR180y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR180y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR180y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97860"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_toctd2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcaACP_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR181y" sboTerm="SBO:0000176" id="R_EAR181y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR181y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR181y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97862"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c11vaceACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octeACP_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR40y" sboTerm="SBO:0000176" id="R_EAR40y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C40_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR40y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR40y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97864"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_but2eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_butACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR60y" sboTerm="SBO:0000176" id="R_EAR60y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C60_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR60y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR60y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97866"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thex2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EAR80y" sboTerm="SBO:0000176" id="R_EAR80y" name="enoyl_acyl_carrier_protein_reductase__NADPH___n_C80_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR80y"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR80y"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97868"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_toct2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocACP_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ECOAE" sboTerm="SBO:0000176" id="R_ECOAE" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxybutanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ECOAE"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH12" sboTerm="SBO:0000176" id="R_ECOAH12" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyisobutyryl_CoA___mitochondria_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ECOAH12"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ECOAH12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2mp2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hibutcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ECOAH9ir" sboTerm="SBO:0000176" id="R_ECOAH9ir" name="2_Methylprop_2_enoyl_CoA__2_Methylbut_2_enoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ECOAH9ir"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ECOAH9ir"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2mb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hmbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ECTOH" sboTerm="SBO:0000176" id="R_ECTOH" name="ectoine_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ECTOH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ecto__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aac24dab_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4432"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECTOabcpp" sboTerm="SBO:0000185" id="R_ECTOabcpp" name="L_ectoine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ECTOabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ecto__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ecto__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4425"/> <fbc:geneProductRef fbc:geneProduct="PP_4428"/> <fbc:geneProductRef fbc:geneProduct="PP_4427"/> <fbc:geneProductRef fbc:geneProduct="PP_4426"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECTOtex" sboTerm="SBO:0000185" id="R_ECTOtex" name="L_ectoine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ECTOtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ecto__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ecto__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EGMEACPR" sboTerm="SBO:0000176" id="R_EGMEACPR" name="Enoylglutaryl_ACP_methyl_ester_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EGMEACPR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EGMEACPR"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97906"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_egmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ENO" sboTerm="SBO:0000176" id="R_ENO" name="enolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ENO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ENO"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102626"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2pg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1612"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EPMEACPR" sboTerm="SBO:0000176" id="R_EPMEACPR" name="Enoylpimeloyl_ACP_methyl_ester_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EPMEACPR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EPMEACPR"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97945"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_epmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmeACP_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ETHAt2pp" sboTerm="SBO:0000185" id="R_ETHAt2pp" name="ethanolamine_transport_in_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ETHAt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETHAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etha_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0544"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHAtex" sboTerm="SBO:0000185" id="R_ETHAtex" name="ethanolamine_transport_via_diffusion__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ETHAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETHAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etha_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etha_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ETOHtex" sboTerm="SBO:0000185" id="R_ETOHtex" name="ethanol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ETOHtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETOHtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etoh_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ETOHtrpp" sboTerm="SBO:0000185" id="R_ETOHtrpp" name="ethanol_reversible_transport_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ETOHtrpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETOHtrpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EX_12dgr160_e" sboTerm="SBO:0000627" id="R_EX_12dgr160_e" name="1_2_Diacyl_sn_glycerol__dihexadecanoyl__n_C160__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_12dgr160_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_12dgr160_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_12dgr180_e" sboTerm="SBO:0000627" id="R_EX_12dgr180_e" name="1_2_Diacyl_sn_glycerol__dioctadecanoyl__n_C180__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_12dgr180_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_12dgr180_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_13dampp_e" sboTerm="SBO:0000627" id="R_EX_13dampp_e" name="1_3_Diaminopropane_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_13dampp_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_13dampp_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_13dampp_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_15dap_e" sboTerm="SBO:0000627" id="R_EX_15dap_e" name="1_5_Diaminopentane_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_15dap_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_15dap_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97995"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_15dap_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_1ag160_e" sboTerm="SBO:0000627" id="R_EX_1ag160_e" name="1_Acyl_sn_glycerol__hexadecanoate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag160_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag160_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_1ag180_e" sboTerm="SBO:0000627" id="R_EX_1ag180_e" name="1_Acyl_sn_glycerol__octadecanoate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag180_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag180_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_1ag181d9_e" sboTerm="SBO:0000627" id="R_EX_1ag181d9_e" name="1_Acyl_sn_glycerol__nC181d9__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag181d9_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag181d9_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_1ag182d9d12_e" sboTerm="SBO:0000627" id="R_EX_1ag182d9d12_e" name="1_Acyl_sn_glycerol__nC182d9d12__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag182d9d12_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag182d9d12_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_25dkglcn_e" sboTerm="SBO:0000627" id="R_EX_25dkglcn_e" name="2_5_diketo_D_gluconate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_25dkglcn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_25dkglcn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_26dap__M_e" sboTerm="SBO:0000627" id="R_EX_26dap__M_e" name="meso_2_6_Diaminoheptanedioate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_26dap__M_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_26dap__M_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98010"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_26dap__M_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_AEP_e" sboTerm="SBO:0000627" id="R_EX_AEP_e" name="_2_Aminoethyl_phosphonate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_AEP_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_AEP_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98099"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ameph_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_2ddglcn_e" sboTerm="SBO:0000627" id="R_EX_2ddglcn_e" name="2_Dehydro_3_deoxy_D_gluconate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_2ddglcn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_2ddglcn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98011"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ddglcn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_2dhglcn_e" sboTerm="SBO:0000627" id="R_EX_2dhglcn_e" name="2_Dehydro_D_gluconate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_2dhglcn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_2dhglcn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98012"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2dhglcn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_2m35mdntha_e" sboTerm="SBO:0000627" id="R_EX_2m35mdntha_e" name="N__2_methyl_3_5_dinitrophenyl__4_methyl_3_5_dinitroaniline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_2m35mdntha_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_34dhbz_e" sboTerm="SBO:0000627" id="R_EX_34dhbz_e" name="3_4_Dihydroxybenzoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_34dhbz_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_34dhbz_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98024"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhbz_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_34dhcinm_e" sboTerm="SBO:0000627" id="R_EX_34dhcinm_e" name="3_4_Dihydroxy_trans_cinnamate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_34dhcinm_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_34dhcinm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98025"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhcinm_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_34dhphe_e" sboTerm="SBO:0000627" id="R_EX_34dhphe_e" name="3_4_Dihydroxy_L_phenylalanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_34dhphe_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_34dhphe_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98028"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhphe_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_35dnta_e" sboTerm="SBO:0000627" id="R_EX_35dnta_e" name="N_N_bis_3_5_dinitrotolyl__amine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_35dnta_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_35dnta_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_3h4atb_e" sboTerm="SBO:0000627" id="R_EX_3h4atb_e" name="3_Hydroxy_4_acetylthiobutanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_3h4atb_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3h4atb_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_3mb_e" sboTerm="SBO:0000627" id="R_EX_3mb_e" name="3_Methylbutanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_3mb_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_3mb_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98047"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mb_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_3oxoadp_e" sboTerm="SBO:0000627" id="R_EX_3oxoadp_e" name="3_Oxoadipate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_3oxoadp_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_3oxoadp_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98054"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3oxoadp_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_4abut_e" sboTerm="SBO:0000627" id="R_EX_4abut_e" name="4_Aminobutanoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_4abut_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4abut_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98058"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_4hbz_e" sboTerm="SBO:0000627" id="R_EX_4hbz_e" name="4_Hydroxybenzoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_4hbz_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4hbz_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98062"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hbz_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_4hpro_DC_e" sboTerm="SBO:0000627" id="R_EX_4hpro_DC_e" name="cis_4_Hydroxy_D_proline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_4hpro_DC_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_DC_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_4hpro_LT_e" sboTerm="SBO:0000627" id="R_EX_4hpro_LT_e" name="trans_4_Hydroxy_L_proline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_4hpro_LT_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4hpro_LT_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98066"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_LT_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_5aptn_e" sboTerm="SBO:0000627" id="R_EX_5aptn_e" name="5_Aminopentanoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_5aptn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aptn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_5mcsn_e" sboTerm="SBO:0000627" id="R_EX_5mcsn_e" name="5_Methylcytosine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_5mcsn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5mcsn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_5oxpro_e" sboTerm="SBO:0000627" id="R_EX_5oxpro_e" name="5_Oxoproline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_5oxpro_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_5oxpro_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98087"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5oxpro_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_6atha_e" sboTerm="SBO:0000627" id="R_EX_6atha_e" name="6_acetylthiohexanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_6atha_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_6atha_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_6hnac_e" sboTerm="SBO:0000627" id="R_EX_6hnac_e" name="6_Hydroxynicotinate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_6hnac_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_6hnac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_met__D_e" sboTerm="SBO:0000627" id="R_EX_met__D_e" name="D_methionine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_met__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_met__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98752"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_met__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_LalaLglu_e" sboTerm="SBO:0000627" id="R_EX_LalaLglu_e" name="L_alanine_L_glutamate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_LalaLglu_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_LalaLglu_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98183"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_Ncbmpts_e" sboTerm="SBO:0000627" id="R_EX_Ncbmpts_e" name="N_Carbamoylputrescine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" 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<listOfReactants> <speciesReference species="M_R_3htd5e_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_R_3httdca_e" sboTerm="SBO:0000627" id="R_EX_R_3httdca_e" name="_R__3_Hydroxytetradecanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_R_3httdca_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3httdca_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_T4hcinnm_e" sboTerm="SBO:0000627" id="R_EX_T4hcinnm_e" name="trans_4_Hydroxycinnamate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_T4hcinnm_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_T4hcinnm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98191"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_T4hcinnm_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ac_e" sboTerm="SBO:0000627" id="R_EX_ac_e" name="Acetate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98196"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_acac_e" sboTerm="SBO:0000627" id="R_EX_acac_e" name="Acetoacetate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98197"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_acald_e" sboTerm="SBO:0000627" id="R_EX_acald_e" name="Acetaldehyde_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acald_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acald_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98198"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_acon_C_e" sboTerm="SBO:0000627" id="R_EX_acon_C_e" name="cis_Aconitate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acon_C_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acon_C_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98224"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_acser_e" sboTerm="SBO:0000627" id="R_EX_acser_e" name="O_Acetyl_L_serine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acser_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acser_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98225"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acser_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_actn__R_e" sboTerm="SBO:0000627" id="R_EX_actn__R_e" name="_R__Acetoin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_actn__R_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_actn__R_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98226"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_actn__R_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ade_e" sboTerm="SBO:0000627" id="R_EX_ade_e" name="Adenine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ade_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ade_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98229"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ade_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_adn_e" sboTerm="SBO:0000627" id="R_EX_adn_e" name="Adenosine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_adn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_adn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98230"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_adocbl_e" sboTerm="SBO:0000627" id="R_EX_adocbl_e" name="Adenosylcobalamin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_adocbl_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_adocbl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98231"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adocbl_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ag_e" sboTerm="SBO:0000627" id="R_EX_ag_e" name="silver_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ag_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ag_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98238"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ag_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_agm_e" sboTerm="SBO:0000627" id="R_EX_agm_e" name="Agmatine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_agm_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_agm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98239"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_agm_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_akg_e" sboTerm="SBO:0000627" id="R_EX_akg_e" name="2_Oxoglutarate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_akg_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_akg_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98247"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ala_B_e" sboTerm="SBO:0000627" id="R_EX_ala_B_e" name="beta_Alanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ala_B_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ala_B_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98248"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala_B_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ala__D_e" sboTerm="SBO:0000627" id="R_EX_ala__D_e" name="D_Alanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ala__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ala__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98255"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ala__L_e" sboTerm="SBO:0000627" id="R_EX_ala__L_e" name="L_Alanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ala__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ala__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98256"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_alaala_e" sboTerm="SBO:0000627" id="R_EX_alaala_e" name="D_Alanyl_D_alanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_alaala_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_alaala_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98257"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alaala_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_alahis_e" sboTerm="SBO:0000627" id="R_EX_alahis_e" name="L_alaninylhistidine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alahis_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alahis_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_alaleu_e" sboTerm="SBO:0000627" id="R_EX_alaleu_e" name="L_alaninylleucine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alaleu_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alaleu_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_alathr_e" sboTerm="SBO:0000627" id="R_EX_alathr_e" name="L_alaninylthreonine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alathr_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alathr_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_alatrp_e" sboTerm="SBO:0000627" id="R_EX_alatrp_e" name="L_alaninyltryptophan_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alatrp_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alatrp_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_algac_MG_14_e" sboTerm="SBO:0000627" id="R_EX_algac_MG_14_e" name="alginate__1_units_of_acetylated_D_mannuronate_and_4_units_of_L_guluronate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_14_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_14_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_algac_MG_23_e" sboTerm="SBO:0000627" id="R_EX_algac_MG_23_e" name="alginate__2_units_of_acetylated_D_mannuronate_and_3_units_of_L_guluronate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_23_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_23_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_algac_MG_32_e" sboTerm="SBO:0000627" id="R_EX_algac_MG_32_e" name="alginate__3_units_of_acetylated_D_mannuronate_and_2_units_of_L_guluronate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_32_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_32_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_algac_MG_41_e" sboTerm="SBO:0000627" id="R_EX_algac_MG_41_e" name="alginate__4_units_of_acetylated_D_mannuronate_and_one_unit_of_L_guluronate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_41_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_41_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_algac__M_e" sboTerm="SBO:0000627" id="R_EX_algac__M_e" name="Alginate__5_units_of__D_mannuronate_completelly_acetylated__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac__M_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac__M_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_alltn_e" sboTerm="SBO:0000627" id="R_EX_alltn_e" name="Allantoin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_alltn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_alltn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98261"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alltn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_apc_e" sboTerm="SBO:0000627" id="R_EX_apc_e" name="Ampicillin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_apc_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_arbtn_e" sboTerm="SBO:0000627" id="R_EX_arbtn_e" name="aerobactin_minus_Fe3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arbtn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arbtn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98284"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_arbtn_fe3_e" sboTerm="SBO:0000627" id="R_EX_arbtn_fe3_e" name="Aerobactin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arbtn_fe3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arbtn_fe3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98285"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arbtn_fe3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_arg__D_e" sboTerm="SBO:0000627" id="R_EX_arg__D_e" name="D_Arginine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arg__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arg__D_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_arg__L_e" sboTerm="SBO:0000627" id="R_EX_arg__L_e" name="L_Arginine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arg__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arg__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98286"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_asn__D_e" sboTerm="SBO:0000627" id="R_EX_asn__D_e" name="D_Asparagine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_asn__D_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_asn__L_e" sboTerm="SBO:0000627" id="R_EX_asn__L_e" name="L_Asparagine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_asn__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_asn__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98292"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_aso3_e" sboTerm="SBO:0000627" id="R_EX_aso3_e" name="arsenite_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_aso3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_aso3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98293"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_aso4_e" sboTerm="SBO:0000627" id="R_EX_aso4_e" name="arsenate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_aso4_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_aso4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98294"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aso4_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_asp__L_e" sboTerm="SBO:0000627" id="R_EX_asp__L_e" name="L_Aspartate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_asp__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_asp__L_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_balaala_e" sboTerm="SBO:0000627" id="R_EX_balaala_e" name="beta_alanyl_L_alanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balaala_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balaala_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_balabala_e" sboTerm="SBO:0000627" id="R_EX_balabala_e" name="beta_alanyl_beta_alanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balabala_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balabala_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_balagly_e" sboTerm="SBO:0000627" id="R_EX_balagly_e" name="beta_alanyl_L_glycine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balagly_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balagly_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_balaleu_e" sboTerm="SBO:0000627" id="R_EX_balaleu_e" name="beta_alanyl_L_leucine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balaleu_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balaleu_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_balamd_e" sboTerm="SBO:0000627" id="R_EX_balamd_e" name="beta_Alaninamide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balamd_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_balamd_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_bhb_e" sboTerm="SBO:0000627" id="R_EX_bhb_e" name="_R__3_Hydroxybutanoate_transport_via_H_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_bhb_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_bhb_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bhb_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_biliverd_e" sboTerm="SBO:0000627" id="R_EX_biliverd_e" name="Biliverdin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_biliverd_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_biliverd_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_biliverd_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_btd_RR_e" sboTerm="SBO:0000627" id="R_EX_btd_RR_e" name="_R_R__2_3_Butanediol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_btd_RR_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_btd_RR_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98303"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btd_RR_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_btn_e" sboTerm="SBO:0000627" id="R_EX_btn_e" name="Biotin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_btn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_btn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98304"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_butso3_e" sboTerm="SBO:0000627" id="R_EX_butso3_e" name="butanesulfonate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_butso3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_butso3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_butso3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_bz_e" sboTerm="SBO:0000627" id="R_EX_bz_e" name="Benzoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_bz_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_bz_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98308"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bz_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ca2_e" sboTerm="SBO:0000627" id="R_EX_ca2_e" name="Calcium_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ca2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ca2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98318"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ca2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_carn_e" sboTerm="SBO:0000627" id="R_EX_carn_e" name="L_Carnosine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_carn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_carn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98320"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_carn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_catechol_e" sboTerm="SBO:0000627" id="R_EX_catechol_e" name="Catechol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_catechol_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_catechol_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98323"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_catechol_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cbi_e" sboTerm="SBO:0000627" id="R_EX_cbi_e" name="Cobinamide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cbi_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cbi_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98325"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cbi_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cbl1_e" sboTerm="SBO:0000627" id="R_EX_cbl1_e" name="Cob_I_alamin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cbl1_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cbl1_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98326"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cbl1_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cd2_e" sboTerm="SBO:0000627" id="R_EX_cd2_e" name="Cadmium_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cd2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cd2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98330"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cell4_e" sboTerm="SBO:0000627" id="R_EX_cell4_e" name="cellulose__n4_repeating_units__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cell4_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cell4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98332"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cell4_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cgly_e" sboTerm="SBO:0000627" id="R_EX_cgly_e" name="Cys_Gly_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cgly_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cgly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98336"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_chol_e" sboTerm="SBO:0000627" id="R_EX_chol_e" name="Choline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_chol_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_chol_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98339"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_chols_e" sboTerm="SBO:0000627" id="R_EX_chols_e" name="Choline_sulfate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_chols_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_chols_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98341"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chols_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_chor_e" sboTerm="SBO:0000627" id="R_EX_chor_e" name="chorismate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_chor_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_chor_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98342"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chor_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cinnm_e" sboTerm="SBO:0000627" id="R_EX_cinnm_e" name="trans_Cinnamate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_cinnm_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cinnm_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cit_e" sboTerm="SBO:0000627" id="R_EX_cit_e" name="Citrate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cit_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cit_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98346"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cit_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cl_e" sboTerm="SBO:0000627" id="R_EX_cl_e" name="Chloride_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cl_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98349"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cl_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cm_e" sboTerm="SBO:0000627" id="R_EX_cm_e" name="Chloramphenicol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cm_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98351"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cmcbtt_e" sboTerm="SBO:0000627" id="R_EX_cmcbtt_e" name="carboxymycobactin_T__R8_carbon__final_carbon_is_carboxyl_group__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_cmcbtt_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_co2_e" sboTerm="SBO:0000627" id="R_EX_co2_e" name="CO2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_co2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_co2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98353"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_co_e" sboTerm="SBO:0000627" id="R_EX_co_e" name="Carbon_monoxide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_co_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_co_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98354"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_co_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cobalt2_e" sboTerm="SBO:0000627" id="R_EX_cobalt2_e" name="Co2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cobalt2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cobalt2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98356"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cobalt2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_confrl_e" sboTerm="SBO:0000627" id="R_EX_confrl_e" name="Coniferol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_confrl_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_confrl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98361"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_confrl_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_creat_e" sboTerm="SBO:0000627" id="R_EX_creat_e" name="Creatine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_creat_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_creat_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98366"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_creat_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_crn_e" sboTerm="SBO:0000627" id="R_EX_crn_e" name="L_Carnitine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_crn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_crn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98371"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_crn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cro2_e" sboTerm="SBO:0000627" id="R_EX_cro2_e" name="chromite_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_cro2_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cro4_e" sboTerm="SBO:0000627" id="R_EX_cro4_e" name="chromate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cro4_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cro4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98372"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cro4_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_crtn_e" sboTerm="SBO:0000627" id="R_EX_crtn_e" name="Creatinine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_crtn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_crtn_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_crtn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_csn_e" sboTerm="SBO:0000627" id="R_EX_csn_e" name="Cytosine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_csn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_csn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98376"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_csn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cu2_e" sboTerm="SBO:0000627" id="R_EX_cu2_e" name="Cu2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cu2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cu2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98384"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cu_e" sboTerm="SBO:0000627" id="R_EX_cu_e" name="Cu_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cu_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cu_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98385"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cyan_e" sboTerm="SBO:0000627" id="R_EX_cyan_e" name="Hydrogen_cyanide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cyan_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cyan_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98386"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cys__D_e" sboTerm="SBO:0000627" id="R_EX_cys__D_e" name="D_Cysteine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cys__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cys__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98388"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_cys__L_e" sboTerm="SBO:0000627" id="R_EX_cys__L_e" name="L_Cysteine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cys__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cys__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98389"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dag181d9_e" sboTerm="SBO:0000627" id="R_EX_dag181d9_e" name="1_2_Diacyl_sn_glycerol__nC181d9__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dag181d9_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dag181d9_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dag182d9d12_e" sboTerm="SBO:0000627" id="R_EX_dag182d9d12_e" name="1_2_Diacyl_sn_glycerol__nC182d9d12__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dag182d9d12_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dag182d9d12_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dca_e" sboTerm="SBO:0000627" id="R_EX_dca_e" name="Decanoate__n_C100__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_dca_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_dca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98398"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dca_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ddca_e" sboTerm="SBO:0000627" id="R_EX_ddca_e" name="Dodecanoate__n_C120__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ddca_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ddca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98403"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ddca_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dgudbutn_e" sboTerm="SBO:0000627" id="R_EX_dgudbutn_e" name="1_4_Diguanidinobutane_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dgudbutn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dgudbutn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dmanur_e" sboTerm="SBO:0000627" id="R_EX_dmanur_e" name="dimmer_of_D_mannuronate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dmanur_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmanur_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dmgly_e" sboTerm="SBO:0000627" id="R_EX_dmgly_e" name="N_N_Dimethylglycine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_dmgly_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_dmgly_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmgly_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dmso2_e" sboTerm="SBO:0000627" id="R_EX_dmso2_e" name="Dimethyl_sulfone_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dmso2_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmso2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_dopa_e" sboTerm="SBO:0000627" id="R_EX_dopa_e" name="Dopamine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_dopa_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_dopa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98427"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dopa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ecto__L_e" sboTerm="SBO:0000627" id="R_EX_ecto__L_e" name="L_Ectoine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_ecto__L_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ecto__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_enter_e" sboTerm="SBO:0000627" id="R_EX_enter_e" name="Enterochelin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_enter_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_enter_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98449"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_enter_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_etha_e" sboTerm="SBO:0000627" id="R_EX_etha_e" name="Ethanolamine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_etha_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_etha_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98459"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etha_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ethso3_e" sboTerm="SBO:0000627" id="R_EX_ethso3_e" name="ethanesulfonate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ethso3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ethso3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ethso3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_etoh_e" sboTerm="SBO:0000627" id="R_EX_etoh_e" name="Ethanol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_etoh_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_etoh_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98461"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etoh_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fald_e" sboTerm="SBO:0000627" id="R_EX_fald_e" name="Formaldehyde_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fald_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fald_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fcmcbtt_e" sboTerm="SBO:0000627" id="R_EX_fcmcbtt_e" name="iron_III__chelated_carboxymycobactin_T__R8_carbon__final_carbon_is_carboxyl_group__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fcmcbtt_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fe2_e" sboTerm="SBO:0000627" id="R_EX_fe2_e" name="Fe2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fe2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98464"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fe3_e" sboTerm="SBO:0000627" id="R_EX_fe3_e" name="Fe3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fe3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98465"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fe3dcit_e" sboTerm="SBO:0000627" id="R_EX_fe3dcit_e" name="Fe_III_dicitrate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fe3dcit_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe3dcit_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98466"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3dcit_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fe3mcbtt_e" sboTerm="SBO:0000627" id="R_EX_fe3mcbtt_e" name="Iron_III__chelated_mycobactin_T_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fe3mcbtt_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3mcbtt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fe3pyovd_e" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_e" name="Ferrypyoverdine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fe3pyovd_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fe3pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_kt_e" name="Ferrypyoverdine__P_putida_KT2440_specific__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fe3pyovd_kt_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fecrm_e" sboTerm="SBO:0000627" id="R_EX_fecrm_e" name="Ferrichrome_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fecrm_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fecrm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98474"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fecrm_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fecrm_un_e" sboTerm="SBO:0000627" id="R_EX_fecrm_un_e" name="Ferrichrome_minus_Fe_III__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fecrm_un_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fecrm_un_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98475"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fecrm_un_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_feenter_e" sboTerm="SBO:0000627" id="R_EX_feenter_e" name="Fe_enterobactin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_feenter_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_feenter_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98476"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feenter_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_feoxam_e" sboTerm="SBO:0000627" id="R_EX_feoxam_e" name="ferroxamine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_feoxam_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_feoxam_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98477"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feoxam_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_feoxam_un_e" sboTerm="SBO:0000627" id="R_EX_feoxam_un_e" name="ferroxamine_minus_Fe_3__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_feoxam_un_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_feoxam_un_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98478"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feoxam_un_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fer_e" sboTerm="SBO:0000627" id="R_EX_fer_e" name="Ferulate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fer_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fer_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98479"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fer_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_for_e" sboTerm="SBO:0000627" id="R_EX_for_e" name="Formate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_for_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_for_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98490"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_for_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fru_e" sboTerm="SBO:0000627" id="R_EX_fru_e" name="D_Fructose_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fru_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fru_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98492"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fru_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_fum_e" sboTerm="SBO:0000627" id="R_EX_fum_e" name="Fumarate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fum_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fum_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98523"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fum_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ga_e" sboTerm="SBO:0000627" id="R_EX_ga_e" name="Gallic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ga_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ga_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98532"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ga_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_galct__D_e" sboTerm="SBO:0000627" id="R_EX_galct__D_e" name="D_Galactarate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_galct__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_galct__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98539"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galct__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_galur_e" sboTerm="SBO:0000627" id="R_EX_galur_e" name="D_Galacturonate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_galur_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_galur_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98555"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galur_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glc__D_e" sboTerm="SBO:0000627" id="R_EX_glc__D_e" name="D_Glucose_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glc__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glc__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98569"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glc__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glcn_e" sboTerm="SBO:0000627" id="R_EX_glcn_e" name="D_Gluconate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glcn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcn_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glcr_e" sboTerm="SBO:0000627" id="R_EX_glcr_e" name="D_Glucarate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glcr_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcr_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98575"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcr_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glcur_e" sboTerm="SBO:0000627" id="R_EX_glcur_e" name="D_Glucuronate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glcur_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcur_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98577"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcur_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_gln__L_e" sboTerm="SBO:0000627" id="R_EX_gln__L_e" name="L_Glutamine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gln__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gln__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98579"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gln__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glu__L_e" sboTerm="SBO:0000627" id="R_EX_glu__L_e" name="L_Glutamate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glu__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glu__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98583"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glutar_e" sboTerm="SBO:0000627" id="R_EX_glutar_e" name="Glutarate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glutar_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glutar_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_gly_e" sboTerm="SBO:0000627" id="R_EX_gly_e" name="Glycine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gly_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98591"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gly_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyald_e" sboTerm="SBO:0000627" id="R_EX_glyald_e" name="D_Glyceraldehyde_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyald_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyald_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98596"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyald_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyb_e" sboTerm="SBO:0000627" id="R_EX_glyb_e" name="Glycine_betaine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyb_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyb_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98597"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyb_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyc__R_e" sboTerm="SBO:0000627" id="R_EX_glyc__R_e" name="_R__Glycerate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyc__R_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyc__R_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98600"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc__R_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyc_e" sboTerm="SBO:0000627" id="R_EX_glyc_e" name="Glycerol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyc_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98602"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyclt_e" sboTerm="SBO:0000627" id="R_EX_glyclt_e" name="Glycolate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyclt_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyclt_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98603"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyclt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glycol_e" sboTerm="SBO:0000627" id="R_EX_glycol_e" name="Glycol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glycol_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glycol_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glygln_e" sboTerm="SBO:0000627" id="R_EX_glygln_e" name="L_glycinylglutamine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glygln_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glygln_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyglu_e" sboTerm="SBO:0000627" id="R_EX_glyglu_e" name="L_glycinylglutamate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glyglu_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyglu_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glygly_e" sboTerm="SBO:0000627" id="R_EX_glygly_e" name="Glycylglycine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glygly_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glygly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98606"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glygly_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glymet_e" sboTerm="SBO:0000627" id="R_EX_glymet_e" name="L_Glycinylmethionine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glymet_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glymet_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyphe_e" sboTerm="SBO:0000627" id="R_EX_glyphe_e" name="Glycyl_L_phenylalanin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyphe_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyphe_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98611"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyphe_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_glyser_e" sboTerm="SBO:0000627" id="R_EX_glyser_e" name="L_glycinylserine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glyser_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyser_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_gua_e" sboTerm="SBO:0000627" id="R_EX_gua_e" name="Guanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gua_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gua_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98632"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gua_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_gudac_e" sboTerm="SBO:0000627" id="R_EX_gudac_e" name="Guanidinoacetate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gudac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gudac_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gudac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_gudptn_e" sboTerm="SBO:0000627" id="R_EX_gudptn_e" name="delta_Guanidinovaleric_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_gudptn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gudptn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_h2o2_e" sboTerm="SBO:0000627" id="R_EX_h2o2_e" name="Hydrogen_peroxide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h2o2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2o2_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_h2o_e" sboTerm="SBO:0000627" id="R_EX_h2o_e" name="H2O_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h2o_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2o_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_h2s_e" sboTerm="SBO:0000627" id="R_EX_h2s_e" name="Hydrogen_sulfide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h2s_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2s_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98642"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_h_e" sboTerm="SBO:0000627" id="R_EX_h_e" name="H_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98643"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hco3_e" sboTerm="SBO:0000627" id="R_EX_hco3_e" name="Bicarbonate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hco3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hco3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hcys__L_e" sboTerm="SBO:0000627" id="R_EX_hcys__L_e" name="L_homocysteine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hcys__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hcys__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98649"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hcys__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hdca_e" sboTerm="SBO:0000627" id="R_EX_hdca_e" name="Hexadecanoate__n_C160__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hdca_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hdca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98650"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hdca_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hdcea_e" sboTerm="SBO:0000627" id="R_EX_hdcea_e" name="hexadecenoate__n_C161__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hdcea_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hdcea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98651"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hdcea_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hg2_e" sboTerm="SBO:0000627" id="R_EX_hg2_e" name="Hg2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hg2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hg2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98655"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hgentis_e" sboTerm="SBO:0000627" id="R_EX_hgentis_e" name="Homogentisate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hgentis_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hgentis_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hgentis_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_his__L_e" sboTerm="SBO:0000627" id="R_EX_his__L_e" name="L_Histidine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_his__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_his__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98656"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_his__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hisgly_e" sboTerm="SBO:0000627" id="R_EX_hisgly_e" name="L_histidinylglycine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_hisgly_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hisgly_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hishis_e" sboTerm="SBO:0000627" id="R_EX_hishis_e" name="L_histidinylhistidine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_hishis_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hishis_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hom__L_e" sboTerm="SBO:0000627" id="R_EX_hom__L_e" name="L_Homoserine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hom__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hom__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98658"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hom__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hpta_e" sboTerm="SBO:0000627" id="R_EX_hpta_e" name="heptanoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_hpta_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hpta_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hxa_e" sboTerm="SBO:0000627" id="R_EX_hxa_e" name="Hexanoate__n_C60__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hxa_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hxa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98664"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hxa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_hxan_e" sboTerm="SBO:0000627" id="R_EX_hxan_e" name="Hypoxanthine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hxan_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hxan_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98665"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hxan_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_icit_e" sboTerm="SBO:0000627" id="R_EX_icit_e" name="Isocitrate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_icit_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_icit_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ile__L_e" sboTerm="SBO:0000627" id="R_EX_ile__L_e" name="L_Isoleucine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ile__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ile__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98677"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ile__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ind3ac_e" sboTerm="SBO:0000627" id="R_EX_ind3ac_e" name="Indole_3_acetate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ind3ac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ind3ac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98679"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ind3ac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_indole_e" sboTerm="SBO:0000627" id="R_EX_indole_e" name="Indole_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_indole_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_indole_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98681"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ins_e" sboTerm="SBO:0000627" id="R_EX_ins_e" name="Inosine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ins_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ins_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98683"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ins_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_isetac_e" sboTerm="SBO:0000627" id="R_EX_isetac_e" name="Isethionic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_isetac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_isetac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98684"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_isetac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_k_e" sboTerm="SBO:0000627" id="R_EX_k_e" name="K_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_k_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_k_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98686"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_k_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_lac__D_e" sboTerm="SBO:0000627" id="R_EX_lac__D_e" name="D_lactate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lac__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lac__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98694"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lac__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_lac__L_e" sboTerm="SBO:0000627" id="R_EX_lac__L_e" name="L_Lactate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lac__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lac__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98695"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lac__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_leu__D_e" sboTerm="SBO:0000627" id="R_EX_leu__D_e" name="D_Leucine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_leu__D_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_leu__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_leu__L_e" sboTerm="SBO:0000627" id="R_EX_leu__L_e" name="L_Leucine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_leu__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_leu__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98700"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_leu__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_leuleu_e" sboTerm="SBO:0000627" id="R_EX_leuleu_e" name="leucyl_leucine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_leuleu_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_leuleu_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98708"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_leuleu_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_lnlc_e" sboTerm="SBO:0000627" id="R_EX_lnlc_e" name="linoleic_acid__all_cis_C182__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lnlc_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lnlc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98719"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lnlc_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_lpspput_e" sboTerm="SBO:0000627" id="R_EX_lpspput_e" name="Lipopolysacharide__LPS__from_P_putida_KT2440_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_lpspput_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lpspput_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_lys__D_e" sboTerm="SBO:0000627" id="R_EX_lys__D_e" name="D_Lysine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_lys__D_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lys__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_lys__L_e" sboTerm="SBO:0000627" id="R_EX_lys__L_e" name="L_Lysine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lys__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lys__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98724"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lys__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_m_xyl_e" sboTerm="SBO:0000627" id="R_EX_m_xyl_e" name="m_Xylene_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_m_xyl_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_m_xyl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98726"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mal__D_e" sboTerm="SBO:0000627" id="R_EX_mal__D_e" name="D_Malate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mal__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mal__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98730"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mal__L_e" sboTerm="SBO:0000627" id="R_EX_mal__L_e" name="L_Malate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mal__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mal__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98731"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_man_e" sboTerm="SBO:0000627" id="R_EX_man_e" name="D_Mannose_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_man_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_man_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98741"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_man_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_manur_e" sboTerm="SBO:0000627" id="R_EX_manur_e" name="D_Mannuronate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_manur_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_manur_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mcbtt_e" sboTerm="SBO:0000627" id="R_EX_mcbtt_e" name="mycobactin_T_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_mcbtt_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mcbtt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_meoh_e" sboTerm="SBO:0000627" id="R_EX_meoh_e" name="methanol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_meoh_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_meoh_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98748"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_met__L_e" sboTerm="SBO:0000627" id="R_EX_met__L_e" name="L_Methionine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_met__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_met__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98753"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_met__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mg2_e" sboTerm="SBO:0000627" id="R_EX_mg2_e" name="Mg_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mg2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mg2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98756"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mg2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mmet_e" sboTerm="SBO:0000627" id="R_EX_mmet_e" name="S_Methyl_L_methionine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mmet_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mmet_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98760"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mmet_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mn2_e" sboTerm="SBO:0000627" id="R_EX_mn2_e" name="Mn2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mn2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mn2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98761"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mn2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mobd_e" sboTerm="SBO:0000627" id="R_EX_mobd_e" name="Molybdate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mobd_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mobd_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98764"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mobd_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mso3_e" sboTerm="SBO:0000627" id="R_EX_mso3_e" name="methanesulfonate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mso3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mso3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98766"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mso3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_na1_e" sboTerm="SBO:0000627" id="R_EX_na1_e" name="Sodium_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_na1_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_na1_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_nac_e" sboTerm="SBO:0000627" id="R_EX_nac_e" name="Nicotinate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_nac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_nac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98782"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_nh4_e" sboTerm="SBO:0000627" id="R_EX_nh4_e" name="Ammonia_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_nh4_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_nh4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98786"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ni2_e" sboTerm="SBO:0000627" id="R_EX_ni2_e" name="Ni2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ni2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ni2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98787"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ni2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_no2_e" sboTerm="SBO:0000627" id="R_EX_no2_e" name="Nitrite_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_no2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_no2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98790"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_no3_e" sboTerm="SBO:0000627" id="R_EX_no3_e" name="Nitrate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_no3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_no3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98791"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_no_e" sboTerm="SBO:0000627" id="R_EX_no_e" name="Nitric_oxide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_no_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_no_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_nona_e" sboTerm="SBO:0000627" id="R_EX_nona_e" name="Nonanoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_nona_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nona_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_o2_e" sboTerm="SBO:0000627" id="R_EX_o2_e" name="O2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB7N100"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_o2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_o2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98799"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_o_xyl_e" sboTerm="SBO:0000627" id="R_EX_o_xyl_e" name="o_methyltoluene_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_o_xyl_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o_xyl_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_oaa_e" sboTerm="SBO:0000627" id="R_EX_oaa_e" name="Oxaloacetate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_oaa_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_oaa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98802"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_oaa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ocdca_e" sboTerm="SBO:0000627" id="R_EX_ocdca_e" name="octadecanoate__n_C180__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ocdca_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ocdca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98807"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ocdca_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ocdcea_e" sboTerm="SBO:0000627" id="R_EX_ocdcea_e" name="octadecenoate__n_C181__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ocdcea_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ocdcea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98808"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ocdcea_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_octa_e" sboTerm="SBO:0000627" id="R_EX_octa_e" name="octanoate__n_C80__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_octa_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_octa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98810"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_octa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_orn__D_e" sboTerm="SBO:0000627" id="R_EX_orn__D_e" name="D_Ornithine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_orn__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orn__D_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orn__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_orn_e" sboTerm="SBO:0000627" id="R_EX_orn_e" name="Ornithine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_orn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orn_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_orot_e" sboTerm="SBO:0000627" id="R_EX_orot_e" name="Orotate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_orot_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orot_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98814"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orot_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_oxa_e" sboTerm="SBO:0000627" id="R_EX_oxa_e" name="Oxalate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_oxa_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_oxa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98815"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_oxa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_5g2oxpt_e" sboTerm="SBO:0000627" id="R_EX_5g2oxpt_e" name="2_Oxoarginine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_5g2oxpt_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_5g2oxpt_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5g2oxpt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_p_xyl_e" sboTerm="SBO:0000627" id="R_EX_p_xyl_e" name="p_methyltoluene_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_p_xyl_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_p_xyl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98816"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pac_e" sboTerm="SBO:0000627" id="R_EX_pac_e" name="Phenylacetic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98817"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pacald_e" sboTerm="SBO:0000627" id="R_EX_pacald_e" name="Phenylacetaldehyde_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pacald_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pacald_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98818"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pacald_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pb2_e" sboTerm="SBO:0000627" id="R_EX_pb2_e" name="Pb2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pb2_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pb2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pea_e" sboTerm="SBO:0000627" id="R_EX_pea_e" name="Phenylethylalcohol_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pea_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pea_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pea_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_peamn_e" sboTerm="SBO:0000627" id="R_EX_peamn_e" name="Phenethylamine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_peamn_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_peamn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98830"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_peamn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pentso3_e" sboTerm="SBO:0000627" id="R_EX_pentso3_e" name="pentanesulfonate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pentso3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pentso3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98837"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pentso3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phe__D_e" sboTerm="SBO:0000627" id="R_EX_phe__D_e" name="D_Phenylalanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phe__D_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phe__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phe__L_e" sboTerm="SBO:0000627" id="R_EX_phe__L_e" name="L_Phenylalanine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_phe__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_phe__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98845"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phe__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phedca_e" sboTerm="SBO:0000627" id="R_EX_phedca_e" name="10_Phenyldecanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phedca_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phedca_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phehpa_e" sboTerm="SBO:0000627" id="R_EX_phehpa_e" name="7_Phenylheptanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phehpa_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phehpa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phehxa_e" sboTerm="SBO:0000627" id="R_EX_phehxa_e" name="6_Phenylhexanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phehxa_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phehxa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pheme_e" sboTerm="SBO:0000627" id="R_EX_pheme_e" name="Protoheme_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pheme_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pheme_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98848"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phenona_e" sboTerm="SBO:0000627" id="R_EX_phenona_e" name="9_Phenylnonanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phenona_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phenona_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pheocta_e" sboTerm="SBO:0000627" id="R_EX_pheocta_e" name="8_Phenyloctanoic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pheocta_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pheocta_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phept_e" sboTerm="SBO:0000627" id="R_EX_phept_e" name="5_phenylvaleric_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phept_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phept_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_phpyr_e" sboTerm="SBO:0000627" id="R_EX_phpyr_e" name="Phenylpyruvate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_phpyr_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_phpyr_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phpyr_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pi_e" sboTerm="SBO:0000627" id="R_EX_pi_e" name="Phosphate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pi_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pi_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98854"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pi_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pnto__R_e" sboTerm="SBO:0000627" id="R_EX_pnto__R_e" name="_R__Pantothenate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pnto__R_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pnto__R_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98856"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pnto__R_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ppa_e" sboTerm="SBO:0000627" id="R_EX_ppa_e" name="Propionate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ppa_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ppa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98857"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ppa_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ppi_e" sboTerm="SBO:0000627" id="R_EX_ppi_e" name="Diphosphate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ppi_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ppi_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98860"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ppi_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_prealg_MG_14_e" sboTerm="SBO:0000627" id="R_EX_prealg_MG_14_e" name="beta_1_4_glycosidic__1__beta_D_mannuronic__4__L_guluronic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_14_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_14_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_prealg_MG_23_e" sboTerm="SBO:0000627" id="R_EX_prealg_MG_23_e" name="beta_1_4_glycosidic__2__beta_D_mannuronic__3__L_guluronic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_23_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_23_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_prealg_MG_32_e" sboTerm="SBO:0000627" id="R_EX_prealg_MG_32_e" name="beta_1_4_glycosidic__3__beta_D_mannuronic__2__L_guluronic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_32_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_32_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_prealg_MG_41_e" sboTerm="SBO:0000627" id="R_EX_prealg_MG_41_e" name="beta_1_4_glycosidic__4__beta_D_mannuronic__1__L_guluronic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_41_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_41_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_prealginate__G_e" sboTerm="SBO:0000627" id="R_EX_prealginate__G_e" name="Prealginate_KT2440___beta_1_4__linked_copolymers_of__b_L_guluronic_acid_5_units__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealginate__G_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealginate__G_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pro__D_e" sboTerm="SBO:0000627" id="R_EX_pro__D_e" name="D_Proline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pro__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pro__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98865"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pro__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pro__L_e" sboTerm="SBO:0000627" id="R_EX_pro__L_e" name="L_Proline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pro__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pro__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98866"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pro__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_progly_e" sboTerm="SBO:0000627" id="R_EX_progly_e" name="L_Prolinylglycine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_progly_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_progly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98867"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_progly_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pta_e" sboTerm="SBO:0000627" id="R_EX_pta_e" name="Pentanoate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pta_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pta_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98885"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pta_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ptrc_e" sboTerm="SBO:0000627" id="R_EX_ptrc_e" name="Putrescine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ptrc_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ptrc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98888"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ptrc_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ptsla_e" sboTerm="SBO:0000627" id="R_EX_ptsla_e" name="petroselaidic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_ptsla_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ptsla_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pydam_e" sboTerm="SBO:0000627" id="R_EX_pydam_e" name="Pyridoxamine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pydam_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pydam_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98892"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pydam_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pyovd_e" sboTerm="SBO:0000627" id="R_EX_pyovd_e" name="Pyoverdine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pyovd_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pyovd_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_pyovd_kt_e" name="Pyoverdine__P_putida_specific__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pyovd_kt_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pyr_e" sboTerm="SBO:0000627" id="R_EX_pyr_e" name="Pyruvate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pyr_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pyr_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98895"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pyr_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_quin_e" sboTerm="SBO:0000627" id="R_EX_quin_e" name="Quinate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_quin_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_quin_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98898"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_rib__D_e" sboTerm="SBO:0000627" id="R_EX_rib__D_e" name="D_Ribose_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_rib__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_rib__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98911"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_rib__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_sbo3_e" sboTerm="SBO:0000627" id="R_EX_sbo3_e" name="antimonite_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_sbo3_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_sbo3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_sel_e" sboTerm="SBO:0000627" id="R_EX_sel_e" name="Selenate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_sel_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_sel_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98927"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ser__D_e" sboTerm="SBO:0000627" id="R_EX_ser__D_e" name="D_Serine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ser__D_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ser__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98929"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ser__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ser__L_e" sboTerm="SBO:0000627" id="R_EX_ser__L_e" name="L_Serine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ser__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ser__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98930"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ser__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_sheme_e" sboTerm="SBO:0000627" id="R_EX_sheme_e" name="Siroheme_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_sheme_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_sheme_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_skm_e" sboTerm="SBO:0000627" id="R_EX_skm_e" name="Shikimate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_skm_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_skm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98931"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_skm_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_so2_e" sboTerm="SBO:0000627" id="R_EX_so2_e" name="sulfur_dioxide_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_so2_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_so2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98934"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_so3_e" sboTerm="SBO:0000627" id="R_EX_so3_e" name="Sulfite_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_so3_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_so3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so3_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_so4_e" sboTerm="SBO:0000627" id="R_EX_so4_e" name="Sulfate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_so4_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_so4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98935"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so4_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_spmd_e" sboTerm="SBO:0000627" id="R_EX_spmd_e" name="Spermidine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_spmd_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_spmd_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98940"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_spmd_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_succ_e" sboTerm="SBO:0000627" id="R_EX_succ_e" name="Succinate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_succ_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_succ_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_succ_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_sulfac_e" sboTerm="SBO:0000627" id="R_EX_sulfac_e" name="sulfoacetate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_sulfac_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_sulfac_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_sulfac_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tag160_e" sboTerm="SBO:0000627" id="R_EX_tag160_e" name="Triacylglycerol__hexadecanoate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag160_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tag160_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tag180_e" sboTerm="SBO:0000627" id="R_EX_tag180_e" name="Triacylglycerol__octadecanoate__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag180_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tag180_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tag181d9_e" sboTerm="SBO:0000627" id="R_EX_tag181d9_e" name="Triacylglycerol__nC181d9__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag181d9_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tag181d9_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tag182d9d12_e" sboTerm="SBO:0000627" id="R_EX_tag182d9d12_e" name="Triacylglycerol__nC182d9d12__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag182d9d12_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tag182d9d12_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_taur_e" sboTerm="SBO:0000627" id="R_EX_taur_e" name="Taurine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_taur_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_taur_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98956"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_taur_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tcynt_e" sboTerm="SBO:0000627" id="R_EX_tcynt_e" name="Thiocyanate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tcynt_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tcynt_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98962"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_thr__L_e" sboTerm="SBO:0000627" id="R_EX_thr__L_e" name="L_Threonine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_thr__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_thr__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98977"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_thr__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_thym_e" sboTerm="SBO:0000627" id="R_EX_thym_e" name="Thymine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_thym_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_thym_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98979"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_thym_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tmanur_e" sboTerm="SBO:0000627" id="R_EX_tmanur_e" name="trimmer_of_D_mannuronate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tmanur_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tmanur_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tnt_e" sboTerm="SBO:0000627" id="R_EX_tnt_e" name="2_4_6_Trinitrotoluene_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tnt_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tol_e" sboTerm="SBO:0000627" id="R_EX_tol_e" name="Toluene_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tol_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tol_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98986"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_trp__L_e" sboTerm="SBO:0000627" id="R_EX_trp__L_e" name="L_Tryptophan_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_trp__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_trp__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98991"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_trp__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tsul_e" sboTerm="SBO:0000627" id="R_EX_tsul_e" name="Thiosulfate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tsul_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tsul_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98995"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tsul_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ttdca_e" sboTerm="SBO:0000627" id="R_EX_ttdca_e" name="tetradecanoate__n_C140__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ttdca_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ttdca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98996"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ttdca_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ttdcea_e" sboTerm="SBO:0000627" id="R_EX_ttdcea_e" name="tetradecenoate__n_C141__exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ttdcea_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ttdcea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98997"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ttdcea_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ttrcyc_e" sboTerm="SBO:0000627" id="R_EX_ttrcyc_e" name="tetracycline_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ttrcyc_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ttrcyc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99000"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tungs_e" sboTerm="SBO:0000627" id="R_EX_tungs_e" name="tungstate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tungs_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tungs_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99001"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tungs_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tyr__D_e" sboTerm="SBO:0000627" id="R_EX_tyr__D_e" name="D_Tyrosine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tyr__D_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tyr__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_tyr__L_e" sboTerm="SBO:0000627" id="R_EX_tyr__L_e" name="L_Tyrosine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tyr__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tyr__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99005"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tyr__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_ura_e" sboTerm="SBO:0000627" id="R_EX_ura_e" name="Uracil_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ura_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ura_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99023"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ura_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_urea_e" sboTerm="SBO:0000627" id="R_EX_urea_e" name="Urea_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_urea_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_urea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99025"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_urea_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_uri_e" sboTerm="SBO:0000627" id="R_EX_uri_e" name="Uridine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_uri_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_uri_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99026"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_uri_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_vacc_e" sboTerm="SBO:0000627" id="R_EX_vacc_e" name="vaccenic_acid_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_vacc_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_vacc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99030"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vacc_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_val__D_e" sboTerm="SBO:0000627" id="R_EX_val__D_e" name="D_Valine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_val__D_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_val__D_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_val__L_e" sboTerm="SBO:0000627" id="R_EX_val__L_e" name="L_Valine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_val__L_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_val__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99031"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_val__L_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_vanln_e" sboTerm="SBO:0000627" id="R_EX_vanln_e" name="Vanillin_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_vanln_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_vanln_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99032"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vanln_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_vanlt_e" sboTerm="SBO:0000627" id="R_EX_vanlt_e" name="Vanillate_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_vanlt_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_vanlt_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99033"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vanlt_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_xan_e" sboTerm="SBO:0000627" id="R_EX_xan_e" name="Xanthine_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_xan_e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_xan_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99041"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_xan_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_zn2_e" sboTerm="SBO:0000627" id="R_EX_zn2_e" name="Zinc_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_zn2_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_zn2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_FA100ACPHi" sboTerm="SBO:0000176" id="R_FA100ACPHi" name="fatty_acyl_ACP_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FA100ACPHi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA100ACPHi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99086"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FA120ACPHi" sboTerm="SBO:0000176" id="R_FA120ACPHi" name="fatty_acyl_ACP_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FA120ACPHi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA120ACPHi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99087"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FA140ACPHi" sboTerm="SBO:0000176" id="R_FA140ACPHi" name="fatty_acyl_ACP_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FA140ACPHi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA140ACPHi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99089"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FA141ACPHi" sboTerm="SBO:0000176" id="R_FA141ACPHi" name="fatty_acyl_ACP_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FA141ACPHi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA141ACPHi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99093"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdcea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FA160ACPHi" sboTerm="SBO:0000176" id="R_FA160ACPHi" name="fatty_acyl_ACP_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FA160ACPHi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA160ACPHi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99097"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FA161ACPHi" sboTerm="SBO:0000176" id="R_FA161ACPHi" name="fatty_acyl_ACP_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FA161ACPHi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA161ACPHi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99103"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FA80ACPHi" sboTerm="SBO:0000176" id="R_FA80ACPHi" name="fatty_acyl_ACP_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FA80ACPHi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA80ACPHi"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99125"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0922"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE100" sboTerm="SBO:0000176" id="R_FACOAE100" name="fatty_acid_CoA_thioesterase__decanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE100"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE100"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99127"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE120" sboTerm="SBO:0000176" id="R_FACOAE120" name="fatty_acid_CoA_thioesterase__dodecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE120"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99128"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE140" sboTerm="SBO:0000176" id="R_FACOAE140" name="fatty_acid_CoA_thioesterase__tetradecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE140"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99129"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE141" sboTerm="SBO:0000176" id="R_FACOAE141" name="fatty_acid_CoA_thioesterase__tetradecenoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE141"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99130"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdcea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE160" sboTerm="SBO:0000176" id="R_FACOAE160" name="fatty_acid_CoA_thioesterase__hexadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE160"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0418"/> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE161" sboTerm="SBO:0000176" id="R_FACOAE161" name="fatty_acid_CoA_thioesterase__hexadecenoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE161"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99132"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE180" sboTerm="SBO:0000176" id="R_FACOAE180" name="fatty_acid_CoA_thioesterase__octadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE180"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE181" sboTerm="SBO:0000176" id="R_FACOAE181" name="fatty_acid_CoA_thioesterase__octadecenoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE181"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99134"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMR_0260" sboTerm="SBO:0000176" id="R_HMR_0260" name="fatty_acid_CoA_thioesterase__vaccenic_acic_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMR_0260"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMR_0260"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE1829Z12Z" sboTerm="SBO:0000176" id="R_FACOAE1829Z12Z" name="fatty_acid_CoA_thioesterase__linoleic_acid_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE1829Z12Z"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE1829Z12Z"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE50" sboTerm="SBO:0000176" id="R_FACOAE50" name="fatty_acid_CoA_thioesterase__pentanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FACOAE50"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pta_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE60" sboTerm="SBO:0000176" id="R_FACOAE60" name="fatty_acid_CoA_thioesterase__hexanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE60"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE60"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99139"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE70" sboTerm="SBO:0000176" id="R_FACOAE70" name="fatty_acid_CoA_thioesterase__heptanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FACOAE70"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpta_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE80" sboTerm="SBO:0000176" id="R_FACOAE80" name="fatty_acid_CoA_thioesterase__octanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FACOAE80"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE80"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAE90" sboTerm="SBO:0000176" id="R_FACOAE90" name="fatty_acid_CoA_thioesterase__nonanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FACOAE90"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FALDep" sboTerm="SBO:0000185" id="R_FALDep" name="Formaldehyde_extrusion_pump" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FALDep"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3425"/> <fbc:geneProductRef fbc:geneProduct="PP_3426"/> <fbc:geneProductRef fbc:geneProduct="PP_3427"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FALDtex" sboTerm="SBO:0000185" id="R_FALDtex" name="formaldehyde_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FALDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FALDtpp" sboTerm="SBO:0000185" id="R_FALDtpp" name="formaldehyde_transport_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FALDtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FALDtpp2" sboTerm="SBO:0000185" id="R_FALDtpp2" name="formaldehyde_extrusion__pp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FALDtpp2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3658"/> <fbc:geneProductRef fbc:geneProduct="PP_2647"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FALGTHLs" sboTerm="SBO:0000176" id="R_FALGTHLs" name="formaldehyde_glutathione_ligase__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FALGTHLs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALGTHLs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hmgth_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FBACS" sboTerm="SBO:0000176" id="R_FBACS" name="ferribactin_synthase__P_putida_specific_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FBACS"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_24dab_c" stoichiometry="1" constant="true"/> <speciesReference species="M_3hasp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_n5horn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fbac_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="6" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4219"/> <fbc:geneProductRef fbc:geneProduct="PP_4243"/> <fbc:geneProductRef fbc:geneProduct="PP_4221"/> <fbc:geneProductRef fbc:geneProduct="PP_4220"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FBACabcpp" sboTerm="SBO:0000185" id="R_FBACabcpp" name="Ferribactin__ABC_system__cytoplasm_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FBACabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fbac_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fbac_kt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FBP" sboTerm="SBO:0000176" id="R_FBP" name="fructose_bisphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FBP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FBP"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96239"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5040"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FCLT" sboTerm="SBO:0000176" id="R_FCLT" name="Ferrochelatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FCLT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FCLT"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99472"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppp9_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0744"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMO" sboTerm="SBO:0000176" id="R_FDMO" name="FMNH2_dependent_monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FDMO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDMO"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99486"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_isetac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gcald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0238"/> <fbc:geneProductRef fbc:geneProduct="PP_2765"/> <fbc:geneProductRef fbc:geneProduct="PP_3219"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMO2" sboTerm="SBO:0000176" id="R_FDMO2" name="FMNH2_dependent_monooxygenase__methanesulfonate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FDMO2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDMO2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99488"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0238"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMO3" sboTerm="SBO:0000176" id="R_FDMO3" name="FMNH2_dependent_monooxygenase__ethanesulfonate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FDMO3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDMO3"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99490"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ethso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0238"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMO4" sboTerm="SBO:0000176" id="R_FDMO4" name="FMNH2_dependent_monooxygenase__butanesulfonate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FDMO4"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDMO4"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99492"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_butso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0238"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMO5" sboTerm="SBO:0000176" id="R_FDMO5" name="FMNH2_dependent_monooxygenase__pentanesulfonate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FDMO5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDMO5"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99494"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pentso3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0238"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMO6" sboTerm="SBO:0000176" id="R_FDMO6" name="FMNH2_dependent_monooxygenase__sulfoacetate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FDMO6"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDMO6"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99496"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sulfac_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0238"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMO7" sboTerm="SBO:0000176" id="R_FDMO7" name="FMNH2_dependent_dimethylsulfone_monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FDMO7"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmso2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mso3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2765"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDMOtau" sboTerm="SBO:0000176" id="R_FDMOtau" name="FMNH2_dependent_monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FDMOtau"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDMOtau"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_taur_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0238"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE2t3pp" sboTerm="SBO:0000185" id="R_FE2t3pp" name="iron__Fe2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FE2t3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FE2t3pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE2tex" sboTerm="SBO:0000185" id="R_FE2tex" name="iron__II__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FE2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FE2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FE3DCIT2abcpp" sboTerm="SBO:0000185" id="R_FE3DCIT2abcpp" name="iron_transport_from_ferric_dicitrate_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3DCIT2abcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3dcit_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2593"/> <fbc:geneProductRef fbc:geneProduct="PP_2594"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2592"/> <fbc:geneProductRef fbc:geneProduct="PP_2591"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> <fbc:geneProductRef fbc:geneProduct="PP_2418"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITCH" sboTerm="SBO:0000176" id="R_FE3DCITCH" name="Ferric_dicitrate_chelation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3DCITCH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITabcpp" sboTerm="SBO:0000185" id="R_FE3DCITabcpp" name="iron_transport_from_ferric_dicitrate_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FE3DCITabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FE3DCITabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3dcit_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2593"/> <fbc:geneProductRef fbc:geneProduct="PP_2594"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2592"/> <fbc:geneProductRef fbc:geneProduct="PP_2591"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> <fbc:geneProductRef fbc:geneProduct="PP_2418"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITtonex" sboTerm="SBO:0000185" id="R_FE3DCITtonex" name="ferric_dicitrate_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FE3DCITtonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FE3DCITtonex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3dcit_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3dcit_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4613"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0867"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3PYOVD2tonex" sboTerm="SBO:0000185" id="R_FE3PYOVD2tonex" name="Ferrypioverdine__Pputida_specific__Ton_dependent_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVD2tonex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3pyovd_kt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0669"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4217"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0535"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3PYOVDDR" sboTerm="SBO:0000176" id="R_FE3PYOVDDR" name="Ferrypyoverdine_dissociation_reduction" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDDR"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FE3PYOVDDR2" sboTerm="SBO:0000176" id="R_FE3PYOVDDR2" name="Ferrypyoverdine__dissociation_reduction__Pputida_specific_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDDR2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_kt_p" stoichiometry="2" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_p" stoichiometry="2" constant="true"/> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_kt_p" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FE3PYOVDL" sboTerm="SBO:0000176" id="R_FE3PYOVDL" name="Ferripyoverdine_complex_formation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDL"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3pyovd_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3PYOVDL2" sboTerm="SBO:0000176" id="R_FE3PYOVDL2" name="Ferripyoverdine_complex_formation__P_putida_KT2440_specific_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDL2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3PYOVDtonex" sboTerm="SBO:0000185" id="R_FE3PYOVDtonex" name="Ferrypioverdine__no_specific__Ton_dependent_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDtonex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3pyovd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0669"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4217"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0535"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3abcpp" sboTerm="SBO:0000185" id="R_FE3abcpp" name="iron__III__transport_via_ABC_system__periplasm_to_cytoplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FE3abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FE3abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4881"/> <fbc:geneProductRef fbc:geneProduct="PP_4882"/> <fbc:geneProductRef fbc:geneProduct="PP_1078"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5196"/> <fbc:geneProductRef fbc:geneProduct="PP_5195"/> <fbc:geneProductRef fbc:geneProduct="PP_1078"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FECRMR1" sboTerm="SBO:0000176" id="R_FECRMR1" name="Ferrichrome_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FECRMR1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMR1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fecrm_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fecrm_un_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FECRMR2" sboTerm="SBO:0000176" id="R_FECRMR2" name="Ferrichrome_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FECRMR2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMR2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fecrm_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fecrm_un_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FECRMUtex" sboTerm="SBO:0000185" id="R_FECRMUtex" name="ferrichrome__minus_Fe__secretion__to_extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FECRMUtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMUtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fecrm_un_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fecrm_un_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FECRMUtpp" sboTerm="SBO:0000185" id="R_FECRMUtpp" name="ferrichrome__minus_Fe__secretion__to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FECRMUtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMUtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fecrm_un_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fecrm_un_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FECRMabcpp" sboTerm="SBO:0000185" id="R_FECRMabcpp" name="ferrichrome_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FECRMabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fecrm_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fecrm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> <fbc:geneProductRef fbc:geneProduct="PP_2418"/> </fbc:and> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2593"/> <fbc:geneProductRef fbc:geneProduct="PP_2594"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2592"/> <fbc:geneProductRef fbc:geneProduct="PP_2591"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FECRMexs" sboTerm="SBO:0000176" id="R_FECRMexs" name="ferrichrome_Fe_III__loading_reaction__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FECRMexs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMexs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_fecrm_un_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fecrm_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FECRMtonex" sboTerm="SBO:0000185" id="R_FECRMtonex" name="ferrichrome_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FECRMtonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMtonex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fecrm_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fecrm_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0350"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4755"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEENTERR1" sboTerm="SBO:0000176" id="R_FEENTERR1" name="Fe_enterobactin_reduction__Fe_III__unloading_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEENTERR1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEENTERR1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99543"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_feenter_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_enter_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEENTERR2" sboTerm="SBO:0000176" id="R_FEENTERR2" name="Fe_enterobactin_reduction__Fe_III__unloading_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEENTERR2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEENTERR2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99544"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feenter_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_enter_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEENTERabcpp" sboTerm="SBO:0000185" id="R_FEENTERabcpp" name="Fe_enterobactin_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEENTERabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEENTERabcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99546"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_feenter_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_feenter_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEENTERexs" sboTerm="SBO:0000176" id="R_FEENTERexs" name="enterobactin_Fe_III__binding__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEENTERexs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEENTERexs"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99547"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_enter_e" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_feenter_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEENTERtex" sboTerm="SBO:0000185" id="R_FEENTERtex" name="enterochelin_transport__secretion_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEENTERtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEENTERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_enter_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_enter_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEENTERtonex" sboTerm="SBO:0000185" id="R_FEENTERtonex" name="Fe_enterobactin_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEENTERtonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEENTERtonex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99549"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feenter_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_feenter_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2242"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEENTERtpp" sboTerm="SBO:0000185" id="R_FEENTERtpp" name="enterochelin_transport__secretion_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEENTERtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEENTERtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_enter_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_enter_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEOXAMR1" sboTerm="SBO:0000176" id="R_FEOXAMR1" name="ferroxamine_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEOXAMR1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMR1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99551"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_feoxam_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_feoxam_un_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEOXAMR2" sboTerm="SBO:0000176" id="R_FEOXAMR2" name="ferroxamine_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEOXAMR2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMR2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99552"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feoxam_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_feoxam_un_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEOXAMUtex" sboTerm="SBO:0000185" id="R_FEOXAMUtex" name="ferroxamine__minus_Fe3__secretion__to_extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEOXAMUtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMUtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feoxam_un_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_feoxam_un_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEOXAMUtpp" sboTerm="SBO:0000185" id="R_FEOXAMUtpp" name="ferroxamine__minus_Fe3__secretion__to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEOXAMUtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMUtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feoxam_un_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_feoxam_un_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FEOXAMabcpp" sboTerm="SBO:0000185" id="R_FEOXAMabcpp" name="ferroxamine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEOXAMabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMabcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99556"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_feoxam_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_feoxam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> <fbc:geneProductRef fbc:geneProduct="PP_2418"/> </fbc:and> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2593"/> <fbc:geneProductRef fbc:geneProduct="PP_2594"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2592"/> <fbc:geneProductRef fbc:geneProduct="PP_2591"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEOXAMexs" sboTerm="SBO:0000176" id="R_FEOXAMexs" name="ferroxamine_Fe3_loading_reaction__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEOXAMexs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMexs"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99557"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_feoxam_un_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_feoxam_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEOXAMtonex" sboTerm="SBO:0000185" id="R_FEOXAMtonex" name="ferroxamine_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FEOXAMtonex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMtonex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99558"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_feoxam_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_feoxam_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0160"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FERtex" sboTerm="SBO:0000185" id="R_FERtex" name="ferulate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FERtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fer_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fer_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FERtpp" sboTerm="SBO:0000185" id="R_FERtpp" name="ferulate_transport_via_diffusion___periplasm__" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FERtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FERtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fer_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fer_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FMETTRS" sboTerm="SBO:0000176" id="R_FMETTRS" name="Methionyl_tRNA_formyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FMETTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FMETTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mettrna_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmettrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0067"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FORt2pp" sboTerm="SBO:0000185" id="R_FORt2pp" name="formate_transport_via_proton_symport__uptake_only__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FORt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FORt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_for_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1156"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FORtex" sboTerm="SBO:0000185" id="R_FORtex" name="formate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FORtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FORtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96761"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_for_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FRUK" sboTerm="SBO:0000176" id="R_FRUK" name="fructose_1_phosphate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FRUK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FRUK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_f1p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRUtex" sboTerm="SBO:0000185" id="R_FRUtex" name="D_fructose_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FRUtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FRUtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fru_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fru_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1019"/> <fbc:geneProductRef fbc:geneProduct="PP_1445"/> <fbc:geneProductRef fbc:geneProduct="PP_3570"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUMt2_2pp" sboTerm="SBO:0000185" id="R_FUMt2_2pp" name="Fumarate_transport_via_proton_symport__2_H___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FUMt2_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FUMt2_2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fum_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUMtex" sboTerm="SBO:0000185" id="R_FUMtex" name="Fumarate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FUMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FUMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fum_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_G1PACT" sboTerm="SBO:0000176" id="R_G1PACT" name="glucosamine_1_phosphate_N_acetyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G1PACT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G1PACT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gam1p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acgam1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5411"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G1SAT" sboTerm="SBO:0000176" id="R_G1SAT" name="glutamate_1_semialdehyde_aminotransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G1SAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G1SAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu1sa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aop_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4784"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PAT120" sboTerm="SBO:0000176" id="R_G3PAT120" name="glycerol_3_phosphate_acyltransferase__C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PAT120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PAT120"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95869"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1ddecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PAT140" sboTerm="SBO:0000176" id="R_G3PAT140" name="glycerol_3_phosphate_acyltransferase__C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PAT140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PAT140"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95870"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1tdecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PAT141" sboTerm="SBO:0000176" id="R_G3PAT141" name="glycerol_3_phosphate_acyltransferase__C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PAT141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PAT141"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95871"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1tdec7eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PAT160" sboTerm="SBO:0000176" id="R_G3PAT160" name="glycerol_3_phosphate_acyltransferase__C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PAT160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PAT160"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95872"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1hdecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PAT161" sboTerm="SBO:0000176" id="R_G3PAT161" name="glycerol_3_phosphate_acyltransferase__C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PAT161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PAT161"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95873"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1hdec9eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PAT180" sboTerm="SBO:0000176" id="R_G3PAT180" name="glycerol_3_phosphate_acyltransferase__C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PAT180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PAT180"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95874"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcaACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1odecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PAT181" sboTerm="SBO:0000176" id="R_G3PAT181" name="glycerol_3_phosphate_acyltransferase__C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PAT181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PAT181"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95875"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1odec11eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PD2" sboTerm="SBO:0000176" id="R_G3PD2" name="glycerol_3_phosphate_dehydrogenase__NADP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4169"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PEabcpp" sboTerm="SBO:0000185" id="R_G3PEabcpp" name="sn_glycerol_3_phosphoethanolamine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PEabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PEabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g3pe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g3pe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_G3PGabcpp" sboTerm="SBO:0000185" id="R_G3PGabcpp" name="sn_glycerol_3_phosphoglycerol_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PGabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PGabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g3pg_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g3pg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_G5SADs" sboTerm="SBO:0000176" id="R_G5SADs" name="L_glutamate_5_semialdehyde_dehydratase__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G5SADs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G5SADs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1pyr5c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G5SD" sboTerm="SBO:0000176" id="R_G5SD" name="glutamate_5_semialdehyde_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G5SD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G5SD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4811"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PI" sboTerm="SBO:0000176" id="R_G6PI" name="Glucose_6_phosphate_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G6PI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G6PI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99910"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g6p_B_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1808"/> <fbc:geneProductRef fbc:geneProduct="PP_4701"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GACH" sboTerm="SBO:0000176" id="R_GACH" name="guanidinoacetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GACH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gudac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GADOX" sboTerm="SBO:0000176" id="R_GADOX" name="Gallic_acid_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GADOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GADOX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ga_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_omaketo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2518"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALCTt2rpp" sboTerm="SBO:0000185" id="R_GALCTt2rpp" name="D_galactarte_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALCTt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galct__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galct__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3600"/> <fbc:geneProductRef fbc:geneProduct="PP_4758"/> <fbc:geneProductRef fbc:geneProduct="PP_1710"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALCTtex" sboTerm="SBO:0000185" id="R_GALCTtex" name="D_galactarte_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALCTtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galct__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galct__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GALURDH" sboTerm="SBO:0000176" id="R_GALURDH" name="galacturonate_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GALURDH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galct__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1171"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALURt2rpp" sboTerm="SBO:0000185" id="R_GALURt2rpp" name="D_galacturonate_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALURt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALURt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galur_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1167"/> <fbc:geneProductRef fbc:geneProduct="PP_1169"/> <fbc:geneProductRef fbc:geneProduct="PP_1168"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALURtex" sboTerm="SBO:0000185" id="R_GALURtex" name="D_galacturonate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALURtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALURtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galur_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galur_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GART" sboTerm="SBO:0000176" id="R_GART" name="GAR_transformylase_T" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GART"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GART"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115906"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gar_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1457"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAt1" sboTerm="SBO:0000185" id="R_GAt1" name="Gallate_outer_membrane_porin_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GAt1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GAt1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ga_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ga_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2517"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAt2pp" sboTerm="SBO:0000185" id="R_GAt2pp" name="GAproton_symport_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GAt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ga_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ga_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2519"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GCALDtabcpp" sboTerm="SBO:0000185" id="R_GCALDtabcpp" name="Glycaldehyde_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GCALDtabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gcald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gcald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2673"/> <fbc:geneProductRef fbc:geneProduct="PP_2676"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GDPMANNDH" sboTerm="SBO:0000176" id="R_GDPMANNDH" name="GDP_mannose_6_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GDPMANNDH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gdpmann_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdpmanur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1288"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GF6PTA" sboTerm="SBO:0000176" id="R_GF6PTA" name="glutamine_fructose_6_phosphate_transaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GF6PTA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GF6PTA"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100107"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gam6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5409"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPO" sboTerm="SBO:0000176" id="R_GG15DAPO" name="gamma_glutamyl_cadaverine_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GG15DAPO"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggbdapal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2448"/> <fbc:geneProductRef fbc:geneProduct="PP_4548"/> <fbc:geneProductRef fbc:geneProduct="PP_3146"/> <fbc:geneProductRef fbc:geneProduct="PP_5273"/> <fbc:geneProductRef fbc:geneProduct="PP_4020"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPO" sboTerm="SBO:0000176" id="R_GGDAPO" name="gamma_glutamyl_diaminopropane_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GGDAPO"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggbamppal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4548"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCO" sboTerm="SBO:0000176" id="R_GGPTRCO" name="gamma_glutamyl_putrescine_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GGPTRCO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GGPTRCO"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggbutal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2448"/> <fbc:geneProductRef fbc:geneProduct="PP_3146"/> <fbc:geneProductRef fbc:geneProduct="PP_4548"/> <fbc:geneProductRef fbc:geneProduct="PP_4020"/> <fbc:geneProductRef fbc:geneProduct="PP_5273"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGSPMDO" sboTerm="SBO:0000176" id="R_GGSPMDO" name="gamma_glutamyl_spermidine_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GGSPMDO"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ggspmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggbutal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3146"/> <fbc:geneProductRef fbc:geneProduct="PP_4020"/> <fbc:geneProductRef fbc:geneProduct="PP_4548"/> <fbc:geneProductRef fbc:geneProduct="PP_2448"/> <fbc:geneProductRef fbc:geneProduct="PP_5273"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGSPMDS" sboTerm="SBO:0000176" id="R_GGSPMDS" name="gamma_glutamyl_spermidine_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GGSPMDS"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_spmd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggspmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3148"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GHMT2r" sboTerm="SBO:0000176" id="R_GHMT2r" name="glycine_hydroxymethyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GHMT2r"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GHMT2r"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0671"/> <fbc:geneProductRef fbc:geneProduct="PP_0322"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GK1" sboTerm="SBO:0000176" id="R_GK1" name="guanylate_kinase__GMPATP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GK1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GK1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97091"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5296"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLBRAN3" sboTerm="SBO:0000176" id="R_GLBRAN3" name="1_4_alpha_glucan_branching_enzyme__glyg4n___bglyg4n_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLBRAN3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyg4n_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bglyg4n_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCNt2rpp" sboTerm="SBO:0000185" id="R_GLCNt2rpp" name="D_gluconate_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCNt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCNt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3417"/> <fbc:geneProductRef fbc:geneProduct="PP_0652"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCNtex" sboTerm="SBO:0000185" id="R_GLCNtex" name="D_gluconate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcn_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCOAS" sboTerm="SBO:0000176" id="R_GLCOAS" name="glutaryl_CoA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCOAS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCOAS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glutar_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glutcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLCRt2rpp" sboTerm="SBO:0000185" id="R_GLCRt2rpp" name="D_glucarate_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCRt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCRt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcr_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3600"/> <fbc:geneProductRef fbc:geneProduct="PP_4758"/> <fbc:geneProductRef fbc:geneProduct="PP_1710"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCRtex" sboTerm="SBO:0000185" id="R_GLCRtex" name="D_glucarate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCRtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCRtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcr_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcr_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLCS3" sboTerm="SBO:0000176" id="R_GLCS3" name="glycogen_synthase__ADPGlc___4_units_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCS3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCS3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adpglc_c" stoichiometry="4" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="4" constant="true"/> <speciesReference species="M_glyg4n_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4050"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCURDH" sboTerm="SBO:0000176" id="R_GLCURDH" name="glucoronate_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLCURDH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1171"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCURt2rpp" sboTerm="SBO:0000185" id="R_GLCURt2rpp" name="D_glucuronate_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCURt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCURt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcur_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1167"/> <fbc:geneProductRef fbc:geneProduct="PP_1169"/> <fbc:geneProductRef fbc:geneProduct="PP_1168"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCURtex" sboTerm="SBO:0000185" id="R_GLCURtex" name="D_glucuronat_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCURtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCURtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcur_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcur_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCtex" sboTerm="SBO:0000185" id="R_GLCtex" name="glucose_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glc__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glc__D_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1019"/> <fbc:geneProductRef fbc:geneProduct="PP_1445"/> <fbc:geneProductRef fbc:geneProduct="PP_3570"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLGC" sboTerm="SBO:0000176" id="R_GLGC" name="glucose_1_phosphate_adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLGC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLGC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adpglc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLNTRAT" sboTerm="SBO:0000176" id="R_GLNTRAT" name="glutamyl_tRNA_Gln__amidotransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLNTRAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLNTRAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glutrna_gln_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glntrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0930"/> <fbc:geneProductRef fbc:geneProduct="PP_0931"/> <fbc:geneProductRef fbc:geneProduct="PP_0932"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLNTRS" sboTerm="SBO:0000176" id="R_GLNTRS" name="Glutaminyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLNTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLNTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnagln_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glntrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2904"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLU5K" sboTerm="SBO:0000176" id="R_GLU5K" name="glutamate_5_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLU5K"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLU5K"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0691"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUCYS" sboTerm="SBO:0000176" id="R_GLUCYS" name="gamma_glutamylcysteine_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUCYS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUCYS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glucys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0243"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUDy" sboTerm="SBO:0000176" id="R_GLUDy" name="glutamate_dehydrogenase__NADP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUDy"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUDy"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0675"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUNpp" sboTerm="SBO:0000176" id="R_GLUNpp" name="glutaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUNpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUNpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gln__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2453"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUR" sboTerm="SBO:0000176" id="R_GLUR" name="glutamate_racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUR"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115926"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0736"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUTARt2rpp" sboTerm="SBO:0000185" id="R_GLUTARt2rpp" name="Glutarate_reversible_transport_via_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLUTARt2rpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glutar_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glutar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1400"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUTARtex" sboTerm="SBO:0000185" id="R_GLUTARtex" name="glutarate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLUTARtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glutar_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glutar_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLUTRR" sboTerm="SBO:0000176" id="R_GLUTRR" name="glutamyl_tRNA_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUTRR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUTRR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glutrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu1sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaglu_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0732"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUTRS" sboTerm="SBO:0000176" id="R_GLUTRS" name="Glutamyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaglu_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glutrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1977"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUt2rpp" sboTerm="SBO:0000185" id="R_GLUt2rpp" name="L_glutamate_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUt4pp" sboTerm="SBO:0000185" id="R_GLUt4pp" name="Naglutamate_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0996"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLXO3r" sboTerm="SBO:0000176" id="R_GLXO3r" name="glyoxylate_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLXO3r"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLXO3r"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYALDtex" sboTerm="SBO:0000185" id="R_GLYALDtex" name="Glyceraldehyde_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYALDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyald_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYALDtpp" sboTerm="SBO:0000185" id="R_GLYALDtpp" name="Glyceraldehyde_facilitated_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYALDtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYALDtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1076"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBt2pp" sboTerm="SBO:0000185" id="R_GLYBt2pp" name="Glycine_betaine_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYBt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYBt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyb_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBtex" sboTerm="SBO:0000185" id="R_GLYBtex" name="Glycine_betaine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYBtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYBtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyb_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyb_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYBti4pp" sboTerm="SBO:0000185" id="R_GLYBti4pp" name="Betaine_transport__sodium_symport_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLYBti4pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyb_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0229"/> <fbc:geneProductRef fbc:geneProduct="PP_5061"/> <fbc:geneProductRef fbc:geneProduct="PP_3957"/> <fbc:geneProductRef fbc:geneProduct="PP_5374"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCAt2rpp" sboTerm="SBO:0000185" id="R_GLYCAt2rpp" name="D_glycerate_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCAt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCAt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc__R_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3600"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCAtex" sboTerm="SBO:0000185" id="R_GLYCAtex" name="D_glycerate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc__R_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYCLTDx" sboTerm="SBO:0000176" id="R_GLYCLTDx" name="Glycolate_dehydrogenase__NAD_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCLTDx"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCLTDx"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCLTt2rpp" sboTerm="SBO:0000185" id="R_GLYCLTt2rpp" name="glycolate_transport_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCLTt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCLTt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyclt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCLTt4pp" sboTerm="SBO:0000185" id="R_GLYCLTt4pp" name="glycolate_transport_via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCLTt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCLTt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyclt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1743"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCLTtex" sboTerm="SBO:0000185" id="R_GLYCLTtex" name="glycolate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCLTtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCLTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyclt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYCOLtex" sboTerm="SBO:0000185" id="R_GLYCOLtex" name="Glycol_transport_difusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLYCOLtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glycol_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glycol_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYCtex" sboTerm="SBO:0000185" id="R_GLYCtex" name="glycerol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100179"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1019"/> <fbc:geneProductRef fbc:geneProduct="PP_1445"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCtpp" sboTerm="SBO:0000185" id="R_GLYCtpp" name="glycerol_transport_via_channel__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1076"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYD" sboTerm="SBO:0000176" id="R_GLYD" name="glycerate_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLYD"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYK" sboTerm="SBO:0000176" id="R_GLYK" name="glycerol_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYK"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115829"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1075"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYO1" sboTerm="SBO:0000176" id="R_GLYO1" name="glycine_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYO1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYO1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0612"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYOX" sboTerm="SBO:0000176" id="R_GLYOX" name="hydroxyacylglutathione_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYOX"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100356"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lgt__S_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4144"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYTRS" sboTerm="SBO:0000176" id="R_GLYTRS" name="Glycyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnagly_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glytrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0060"/> <fbc:geneProductRef fbc:geneProduct="PP_0061"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYabcpp" sboTerm="SBO:0000185" id="R_GLYabcpp" name="glycine_transport_via_ABC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYt2pp" sboTerm="SBO:0000185" id="R_GLYt2pp" name="glycine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4840"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYt4pp" sboTerm="SBO:0000185" id="R_GLYt4pp" name="glycine_transport_in_via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0496"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GMHEPAT" sboTerm="SBO:0000176" id="R_GMHEPAT" name="D_glycero_D_manno_hepose_1_phosphate_adenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GMHEPAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GMHEPAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gmhep1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adphep_DD_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4934"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GMHEPK" sboTerm="SBO:0000176" id="R_GMHEPK" name="D_glycero_D_manno_heptose_7_phosphate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GMHEPK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GMHEPK"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100379"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gmhep7p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gmhep17bp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4934"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GMHEPPA" sboTerm="SBO:0000176" id="R_GMHEPPA" name="D_glycero_D_manno_heptose_1_7_bisphosphate_phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GMHEPPA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GMHEPPA"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100380"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gmhep17bp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmhep1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0059"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GMPS2" sboTerm="SBO:0000176" id="R_GMPS2" name="GMP_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GMPS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GMPS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1032"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GPTNH" sboTerm="SBO:0000176" id="R_GPTNH" name="guanidinovalerate_amidinohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GPTNH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gudptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GRXR" sboTerm="SBO:0000176" id="R_GRXR" name="glutaredoxin_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GRXR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GRXR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_grxox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_grxrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5054"/> <fbc:geneProductRef fbc:geneProduct="PP_2958"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTHPi" sboTerm="SBO:0000176" id="R_GTHPi" name="glutathione_peridoxase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GTHPi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GTHPi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1874"/> <fbc:geneProductRef fbc:geneProduct="PP_1686"/> <fbc:geneProductRef fbc:geneProduct="PP_0777"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTHRDabc2pp" sboTerm="SBO:0000185" id="R_GTHRDabc2pp" name="glutathione_export_via_ABC_system__cytoplasm_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GTHRDabc2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GTHRDabc2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GTHS" sboTerm="SBO:0000176" id="R_GTHS" name="glutathione_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GTHS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GTHS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glucys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4993"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTPCI" sboTerm="SBO:0000176" id="R_GTPCI" name="GTP_cyclohydrolase_I" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GTPCI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GTPCI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100454"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahdt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2512"/> <fbc:geneProductRef fbc:geneProduct="PP_1823"/> <fbc:geneProductRef fbc:geneProduct="PP_3324"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTPHs" sboTerm="SBO:0000176" id="R_GTPHs" name="GTP_amine_hydrolysis__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GTPHs"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GTPHs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTR2_kt" sboTerm="SBO:0000176" id="R_GTR2_kt" name="glucosyltransferase__LPS_core_synthesis___glycosyl__1__4__galactosyl__1_3Hep1__heptosyl__1_3__heptosyl__1_5__kdo2_lipidA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GTR2_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galhhlipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggallpsc_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4943"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUAPRT" sboTerm="SBO:0000176" id="R_GUAPRT" name="guanine_phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GUAPRT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GUAPRT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gua_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0747"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUAt2pp" sboTerm="SBO:0000185" id="R_GUAt2pp" name="guanine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GUAt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GUAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gua_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gua_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4290"/> <fbc:geneProductRef fbc:geneProduct="PP_4284"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUAtex" sboTerm="SBO:0000185" id="R_GUAtex" name="Guanine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GUAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GUAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gua_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gua_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUDACabcpp" sboTerm="SBO:0000185" id="R_GUDACabcpp" name="Guanidinoacetate_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GUDACabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gudac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> 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stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gudac_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GUDBUTNAH" sboTerm="SBO:0000176" id="R_GUDBUTNAH" name="4_guanidinobutanoate_amidinohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GUDBUTNAH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GUDBUTNAH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4gudbutn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4523"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUDPTNabcpp" sboTerm="SBO:0000185" id="R_GUDPTNabcpp" name="Guanidinovaleric_acid_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GUDPTNabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gudptn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gudptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GUDPTNtex" sboTerm="SBO:0000185" id="R_GUDPTNtex" name="Guanidinovaleric_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GUDPTNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gudptn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gudptn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_H2CO3D2" sboTerm="SBO:0000176" id="R_H2CO3D2" name="carboxylic_acid_dissociation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2CO3D2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2CO3D2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100483"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2co3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2O2tex" sboTerm="SBO:0000185" id="R_H2O2tex" name="hydrogen_peroxide_transport_via_diffusion__external_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2O2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2Otex" sboTerm="SBO:0000185" id="R_H2Otex" name="H2O_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2Otex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2Otex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2Otpp" sboTerm="SBO:0000185" id="R_H2Otpp" name="H2O_transport_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2Otpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2Otpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4282"/> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2SO" sboTerm="SBO:0000176" id="R_H2SO" name="Hydrogen_sulfide_oxidation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2SO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2SO"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115955"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2St1pp" sboTerm="SBO:0000185" id="R_H2St1pp" name="h2s_transport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2St1pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2St1pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2s_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_H2Stex" sboTerm="SBO:0000185" id="R_H2Stex" name="h2s_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2Stex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2Stex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2s_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HACD12i" sboTerm="SBO:0000176" id="R_HACD12i" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxophenydecanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HACD12i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD13i" sboTerm="SBO:0000176" id="R_HACD13i" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxophenynonanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HACD13i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD14i" sboTerm="SBO:0000176" id="R_HACD14i" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxophenyoctanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HACD14i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD15i" sboTerm="SBO:0000176" id="R_HACD15i" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxophenyheptanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HACD15i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ophpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD16i" sboTerm="SBO:0000176" id="R_HACD16i" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxophenyhexanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HACD16i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ophxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD17i" sboTerm="SBO:0000176" id="R_HACD17i" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxophenypentanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HACD17i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hpptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD18i" sboTerm="SBO:0000176" id="R_HACD18i" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxophenybutyryl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HACD18i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opbcoa_c" 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</rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hmbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2maacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HAT40tex" sboTerm="SBO:0000185" id="R_HAT40tex" name="S_3_Hydroxyacetylthio_acid_transport_diffusion_C40__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HAT40tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3h4atb_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3h4atb_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HAT40tpp" sboTerm="SBO:0000185" id="R_HAT40tpp" name="S_3_Hydroxyacetylthio_acid_transport_diffusion_C40___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HAT40tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3h4atb_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3h4atb_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HATBH" sboTerm="SBO:0000176" id="R_HATBH" name="3_Hydroxy_4_Acetylthiobutanoyl_CoA_Hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HATBH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3h4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3h4atb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HBZOPT" sboTerm="SBO:0000176" id="R_HBZOPT" name="Hydroxybenzoate_octaprenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HBZOPT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HBZOPT"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100567"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ophb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HCYSMT" sboTerm="SBO:0000176" id="R_HCYSMT" name="homocysteine_S_methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HCYSMT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HCYSMT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0658"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HCYSMT2" sboTerm="SBO:0000176" id="R_HCYSMT2" name="Homocysteine_Methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HCYSMT2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HCYSMT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mmet_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0658"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HCYStabcpp" sboTerm="SBO:0000185" id="R_HCYStabcpp" name="L_hcys_L_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HCYStabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HCYStex" sboTerm="SBO:0000185" id="R_HCYStex" name="Homocysteine_transport__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HCYStex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hcys__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hcys__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HDCAtexi" sboTerm="SBO:0000185" id="R_HDCAtexi" name="Hexadecanoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HDCAtexi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HDCAtexi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hdca_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HDCEAtexi" sboTerm="SBO:0000185" id="R_HDCEAtexi" name="Hexadecenoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HDCEAtexi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HDCEAtexi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hdcea_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CTECOAI7" sboTerm="SBO:0000176" id="R_CTECOAI7" name="hexadecenoyl_coa_cis_trans_isomerization" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CTECOAI7"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CTECOAI7"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96941"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEMEOS" sboTerm="SBO:0000176" id="R_HEMEOS" name="Heme_O_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HEMEOS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HEMEOS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115959"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_frdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hemeO_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0816"/> <fbc:geneProductRef fbc:geneProduct="PP_0110"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEPCT" sboTerm="SBO:0000176" id="R_HEPCT" name="LPS_heptose_carbamoyltransferase__LPS_core_P_putida_synthesis_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HEPCT"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cbp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phethapphlipa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_icore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4944"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEPK2_kt" sboTerm="SBO:0000176" id="R_HEPK2_kt" name="LPS_heptose_kinase_II__Pputida_LPS_core_synthesis_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HEPK2_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hphlipa_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpphlipa_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0346"/> <fbc:geneProductRef fbc:geneProduct="PP_0345"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEPK3_kt" sboTerm="SBO:0000176" id="R_HEPK3_kt" name="LPS_heptose_kinase_III__Pputida_LPS_core_synthesis_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HEPK3_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hethapphlipa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phethapphlipa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0345"/> <fbc:geneProductRef fbc:geneProduct="PP_0346"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HG2t3pp" sboTerm="SBO:0000185" id="R_HG2t3pp" name="mercury__Hg2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HG2t3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HG2t3pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HG2tex" sboTerm="SBO:0000185" id="R_HG2tex" name="mercury__Hg2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HG2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HG2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HG2tppi" sboTerm="SBO:0000185" id="R_HG2tppi" name="mercury__Hg2__transport_via_diffusion__periplasm_to_cytoplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HG2tppi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HGENTISt2pp" sboTerm="SBO:0000185" id="R_HGENTISt2pp" name="Homogentisate_transport_in_via_proton_symport__periplam_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HGENTISt2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hgentis_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hgentis_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HGENTIStex" sboTerm="SBO:0000185" id="R_HGENTIStex" name="Homogentisate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HGENTIStex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hgentis_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hgentis_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HGNTOR" sboTerm="SBO:0000176" id="R_HGNTOR" name="Homogentisateoxygen_1_2_oxidoreductase__decyclizing_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HGNTOR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HGNTOR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hgentis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mlacac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4621"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISDr" sboTerm="SBO:0000176" id="R_HISDr" name="histidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HISDr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISDr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urcan_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5032"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISTD" sboTerm="SBO:0000176" id="R_HISTD" name="histidinol_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HISTD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISTD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_histd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0966"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISTP" sboTerm="SBO:0000176" id="R_HISTP" name="histidinol_phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HISTP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISTP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hisp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_histd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0059"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISTRS" sboTerm="SBO:0000176" id="R_HISTRS" name="Histidyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HISTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnahis_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_histrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISabcpp" sboTerm="SBO:0000185" id="R_HISabcpp" name="L_histidine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HISabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISt2rpp" sboTerm="SBO:0000185" id="R_HISt2rpp" name="L_histidine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HISt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMBS" sboTerm="SBO:0000176" id="R_HMBS" name="hydroxymethylbilane_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMBS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMBS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppbng_c" stoichiometry="4" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hmbil_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="4" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0186"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMPK1" sboTerm="SBO:0000176" id="R_HMPK1" name="hydroxymethylpyrimidine_kinase__ATP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMPK1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMPK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4ahmmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4ampm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4782"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMSD" sboTerm="SBO:0000176" id="R_HMSD" name="2_Hydroxymuconate_semialdehyde" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMSD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMSD"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100670"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2hmcnsad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hmc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_096"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMSD2" sboTerm="SBO:0000176" id="R_HMSD2" name="2_Hydroxymuconate_semialdehyde" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMSD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMSD2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100670"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hmccms_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_hmccm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_096"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMSH" sboTerm="SBO:0000176" id="R_HMSH" name="2_hydroxymuconic_semi_aldehyde" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMSH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMSH"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100673"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2hmcnsad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_op4en_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_095"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMSH2" sboTerm="SBO:0000176" id="R_HMSH2" name="2_hydroxymuconic_semi_aldehyde__p_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMSH2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMSH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hmccms_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hchd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_095"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMSH3" sboTerm="SBO:0000176" id="R_HMSH3" name="2_hydroxymuconic_semi_aldehyde__m_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HMSH3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HMSH3"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100673"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cchoxod_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_chpd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_095"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HOMt2pp" sboTerm="SBO:0000185" id="R_HOMt2pp" name="L_homoserineserine_efflux_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HOMt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HOMt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hom__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2239"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HOMtex" sboTerm="SBO:0000185" id="R_HOMtex" name="L_homoserine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HOMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HOMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hom__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hom__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HOMtpp" sboTerm="SBO:0000185" id="R_HOMtpp" name="L_homoserine_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HOMtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hom__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HOPNTAL" sboTerm="SBO:0000176" id="R_HOPNTAL" name="4_hydroxy_2_oxopentanoate_aldolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HOPNTAL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HOPNTAL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4h2opntn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_092"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HOPNTAL2" sboTerm="SBO:0000176" id="R_HOPNTAL2" name="4_hydroxy_2_oxopentanoate_aldolase_p_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HOPNTAL2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HOPNTAL2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hoxoh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_092"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HOPNTAL3" sboTerm="SBO:0000176" id="R_HOPNTAL3" name="4_hydroxy_2_oxopentanoate_aldolase_m_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HOPNTAL3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4h2oxov_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_092"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HOXG" sboTerm="SBO:0000176" id="R_HOXG" name="Heme_oxygenase_1" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HOXG"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HOXG"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100681"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="5" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="3" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="3" constant="true"/> <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_biliverd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="3" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1005"/> <fbc:geneProductRef fbc:geneProduct="PP_2582"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HPAtexi" sboTerm="SBO:0000185" id="R_HPAtexi" name="heptanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HPAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hpta_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hpta_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HSERTA" sboTerm="SBO:0000176" id="R_HSERTA" name="homoserine_O_trans_acetylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HSERTA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HSERTA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_achms_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5097"/> <fbc:geneProductRef fbc:geneProduct="PP_5098"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HSTPT" sboTerm="SBO:0000176" id="R_HSTPT" name="histidinol_phosphate_transaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HSTPT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HSTPT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imacp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hisp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0967"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HXANt2pp" sboTerm="SBO:0000185" id="R_HXANt2pp" name="hypoxanthine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HXANt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HXANt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hxan_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxan_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HXAtex" sboTerm="SBO:0000185" id="R_HXAtex" name="Hexanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HXAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HXAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hxa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hxa_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HXPRT" sboTerm="SBO:0000176" id="R_HXPRT" name="hypoxanthine_phosphoribosyltransferase__Hypoxanthine_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HXPRT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HXPRT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hxan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0747"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HYXNtex" sboTerm="SBO:0000185" id="R_HYXNtex" name="Hypoxanthine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HYXNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HYXNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hxan_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hxan_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_Htex" sboTerm="SBO:0000185" id="R_Htex" name="proton_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Htex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Htex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96768"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_I2FE2ST" sboTerm="SBO:0000176" id="R_I2FE2ST" name="ISC_2Fe_2S_Transfer" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_I2FE2ST"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/I2FE2ST"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100769"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscu_2fe2s_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2fe2s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscu_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0844"/> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_I4FE4SRfdx" sboTerm="SBO:0000176" id="R_I4FE4SRfdx" name="ISC_4Fe_4S_Reduction" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_I4FE4SRfdx"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fdxr_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscu_2fe2s2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscu_4fe4s_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_I4FE4ST" sboTerm="SBO:0000176" id="R_I4FE4ST" name="ISC_4Fe_4S_Transfer" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_I4FE4ST"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/I4FE4ST"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100771"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscu_4fe4s_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4fe4s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscu_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0844"/> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICITt4pp" sboTerm="SBO:0000185" id="R_ICITt4pp" name="citrate_transport_via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ICITt4pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1416"/> <fbc:geneProductRef fbc:geneProduct="PP_1417"/> <fbc:geneProductRef fbc:geneProduct="PP_1418"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICITt_kt" sboTerm="SBO:0000185" id="R_ICITt_kt" name="isocitrate_transport_in_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ICITt_kt"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ICITt_kt"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2057"/> <fbc:geneProductRef fbc:geneProduct="PP_0147"/> <fbc:geneProductRef fbc:geneProduct="PP_2703"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IG3PS" sboTerm="SBO:0000176" id="R_IG3PS" name="Imidazole_glycerol_3_phosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IG3PS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IG3PS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prlp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aicar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_eig3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0293"/> <fbc:geneProductRef fbc:geneProduct="PP_0290"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IGPDH" sboTerm="SBO:0000176" id="R_IGPDH" name="imidazoleglycerol_phosphate_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IGPDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IGPDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_eig3p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imacp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0289"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IGPS" sboTerm="SBO:0000176" id="R_IGPS" name="indole_3_glycerol_phosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IGPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IGPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2cpr5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ig3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0422"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILEDHr" sboTerm="SBO:0000176" id="R_ILEDHr" name="Valine_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILEDHr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEDHr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4617"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILETRS" sboTerm="SBO:0000176" id="R_ILETRS" name="Isoleucyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILETRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILETRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaile_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iletrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0603"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILEabcpp" sboTerm="SBO:0000185" id="R_ILEabcpp" name="L_isoleucine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILEabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1137"/> <fbc:geneProductRef fbc:geneProduct="PP_1138"/> <fbc:geneProductRef fbc:geneProduct="PP_1139"/> <fbc:geneProductRef fbc:geneProduct="PP_1140"/> <fbc:geneProductRef fbc:geneProduct="PP_1141"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4863"/> <fbc:geneProductRef fbc:geneProduct="PP_4864"/> <fbc:geneProductRef fbc:geneProduct="PP_4866"/> <fbc:geneProductRef fbc:geneProduct="PP_4867"/> <fbc:geneProductRef fbc:geneProduct="PP_4865"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILEt2rpp" sboTerm="SBO:0000185" id="R_ILEt2rpp" name="L_isoleucine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILEt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILEtex" sboTerm="SBO:0000185" id="R_ILEtex" name="L_isoleucine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILEtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ile__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ile__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_IMPC" sboTerm="SBO:0000176" id="R_IMPC" name="IMP_cyclohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IMPC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IMPC"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100829"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fprica_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4822"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IND3ACtex" sboTerm="SBO:0000185" id="R_IND3ACtex" name="indole_3_acetate_transport__exterior_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_IND3ACtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ind3ac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ind3ac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_IND3ACtpp" sboTerm="SBO:0000185" id="R_IND3ACtpp" name="indole_3_acetic_acid_export__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_IND3ACtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ind3ac_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ind3ac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3561"/> <fbc:geneProductRef fbc:geneProduct="PP_0926"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_INDOLEt5" sboTerm="SBO:0000185" id="R_INDOLEt5" name="Indole_transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_INDOLEt5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_indole_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_INDOLEt6" sboTerm="SBO:0000185" id="R_INDOLEt6" name="Indole_transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_INDOLEt6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_indole_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_INDOLEtex" sboTerm="SBO:0000185" id="R_INDOLEtex" name="Indole_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_INDOLEtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/INDOLEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_indole_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_INDOLEtpp" sboTerm="SBO:0000185" id="R_INDOLEtpp" name="Indole_transport_diffusion___irreversible_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_INDOLEtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_indole_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_indole_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_INStex" sboTerm="SBO:0000185" id="R_INStex" name="inosine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_INStex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/INStex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ins_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ins_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPDPS" sboTerm="SBO:0000176" id="R_IPDPS" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__ipdp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IPDPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IPDPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2mb4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ipdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0606"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPMD" sboTerm="SBO:0000176" id="R_IPMD" name="3_isopropylmalate_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IPMD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IPMD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3c2hmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3c4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1988"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPPMIa" sboTerm="SBO:0000176" id="R_IPPMIa" name="3_isopropylmalate_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IPPMIa"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IPPMIa"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3c2hmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ippm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1985"/> <fbc:geneProductRef fbc:geneProduct="PP_1986"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPPMIb" sboTerm="SBO:0000176" id="R_IPPMIb" name="2_isopropylmalate_hydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IPPMIb"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IPPMIb"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ippm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3c3hmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1985"/> <fbc:geneProductRef fbc:geneProduct="PP_1986"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPPS" sboTerm="SBO:0000176" id="R_IPPS" name="2_isopropylmalate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IPPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IPPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3c3hmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1025"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IVCS" sboTerm="SBO:0000176" id="R_IVCS" name="Isovaleryl_CoA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_IVCS"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ivcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IZPN" sboTerm="SBO:0000176" id="R_IZPN" name="imidazolonepropionase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IZPN"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IZPN"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4izp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_forglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5030"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KARA1" sboTerm="SBO:0000176" id="R_KARA1" name="ketol_acid_reductoisomerase__2_3_dihydroxy_3_methylbutanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_KARA1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/KARA1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_23dhmb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alac__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4678"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KARA2" sboTerm="SBO:0000176" id="R_KARA2" name="ketol_acid_reductoisomerase__2_Acetolactate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_KARA2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/KARA2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ahbut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_23dhmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4678"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT12" sboTerm="SBO:0000176" id="R_KAT12" name="acetyl_CoA_C_acyltransferase__3_oxophenyldecanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT12"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3opdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_poctacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT13" sboTerm="SBO:0000176" id="R_KAT13" name="acetyl_CoA_C_acyltransferase__3_oxophenylnonanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT13"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3opnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT14" sboTerm="SBO:0000176" id="R_KAT14" name="acetyl_CoA_C_acyltransferase__3_oxophenyloctanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT14"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3opoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT15" sboTerm="SBO:0000176" id="R_KAT15" name="acetyl_CoA_C_acyltransferase__3_oxophenylheptanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT15"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3ophpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT16" sboTerm="SBO:0000176" id="R_KAT16" name="acetyl_CoA_C_acyltransferase__3_oxophenylhexanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT16"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3ophxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT17" sboTerm="SBO:0000176" id="R_KAT17" name="acetyl_CoA_C_acyltransferase__3_oxophenylpentaoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT17"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3opptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT18" sboTerm="SBO:0000176" id="R_KAT18" name="acetyl_CoA_C_acyltransferase__3_oxophenylbutyryl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT18"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3opbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phaccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KDOCT2" sboTerm="SBO:0000176" id="R_KDOCT2" name="3_deoxy_manno_octulosonate_cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_KDOCT2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/KDOCT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdo_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ckdo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1902"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KDOPS" sboTerm="SBO:0000176" id="R_KDOPS" name="3_deoxy__D_manno_octulosonic__acid_8_phosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_KDOPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/KDOPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ara5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_kdo8p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1611"/> <fbc:geneProductRef fbc:geneProduct="PP_1807"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_Kt2pp" sboTerm="SBO:0000185" id="R_Kt2pp" name="potassium_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Kt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Kt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1200"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0065"/> <fbc:geneProductRef fbc:geneProduct="PP_3953"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0065"/> <fbc:geneProductRef fbc:geneProduct="PP_4507"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_Kt3pp" sboTerm="SBO:0000185" id="R_Kt3pp" name="potassium_transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Kt3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Kt3pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5246"/> <fbc:geneProductRef fbc:geneProduct="PP_5066"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2230"/> <fbc:geneProductRef fbc:geneProduct="PP_2229"/> <fbc:geneProductRef fbc:geneProduct="PP_2228"/> <fbc:geneProductRef fbc:geneProduct="PP_2227"/> <fbc:geneProductRef fbc:geneProduct="PP_2226"/> <fbc:geneProductRef fbc:geneProduct="PP_2225"/> </fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0713"/> <fbc:geneProductRef fbc:geneProduct="PP_3311"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_Ktex" sboTerm="SBO:0000185" id="R_Ktex" name="potassium_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Ktex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Ktex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_k_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_LCTSt3ipp" sboTerm="SBO:0000185" id="R_LCTSt3ipp" name="Lactose_transport_via_proton_aniport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LCTSt3ipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LCTSt3ipp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lcts_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lcts_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2428"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUDHr" sboTerm="SBO:0000176" id="R_LEUDHr" name="leucine_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_LEUDHr"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4617"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUTRS" sboTerm="SBO:0000176" id="R_LEUTRS" name="Leucyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LEUTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LEUTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaleu_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leutrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUabcpp" sboTerm="SBO:0000185" id="R_LEUabcpp" name="L_leucine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LEUabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LEUabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1137"/> <fbc:geneProductRef fbc:geneProduct="PP_1138"/> <fbc:geneProductRef fbc:geneProduct="PP_1139"/> <fbc:geneProductRef fbc:geneProduct="PP_1140"/> <fbc:geneProductRef fbc:geneProduct="PP_1141"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4863"/> <fbc:geneProductRef fbc:geneProduct="PP_4864"/> <fbc:geneProductRef fbc:geneProduct="PP_4866"/> <fbc:geneProductRef fbc:geneProduct="PP_4867"/> <fbc:geneProductRef fbc:geneProduct="PP_4865"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUt2rpp" sboTerm="SBO:0000185" id="R_LEUt2rpp" name="L_leucine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LEUt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LEUt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUtex" sboTerm="SBO:0000185" id="R_LEUtex" name="L_leucine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LEUtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LEUtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_leu__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_leu__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_LIPOCT" sboTerm="SBO:0000176" id="R_LIPOCT" name="Lipoyl_octanoyl__transferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LIPOCT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LIPOCT"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101089"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octapb_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4801"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LIPOS" sboTerm="SBO:0000176" id="R_LIPOS" name="Lipoate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LIPOS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LIPOS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101090"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4fe4s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octapb_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2fe2s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dad_5_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_lipopb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4800"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LNLCtexi" sboTerm="SBO:0000185" id="R_LNLCtexi" name="Linoleic_acid__n_C182__transport_periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_LNLCtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lnlc_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lnlc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPADSS2" sboTerm="SBO:0000176" id="R_LPADSS2" name="Lipid_A_disaccaride_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LPADSS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPADSS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lipidX_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u23dddcga_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipidAds_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1604"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPSALAT" sboTerm="SBO:0000176" id="R_LPSALAT" name="LPS_alanyltransferase__LPS_core_Pputida_synthesis_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_LPSALAT"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alatrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggalicore_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galagalicore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaala_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_LPSGTR2_kt" sboTerm="SBO:0000176" id="R_LPSGTR2_kt" name="glucosyltransferase__LPS_core_synthesis___glycosyl__1__4__galactosyl__1_3Hep1__heptosyl__1_3__heptosyl__1_5__kdo2_lipidA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_LPSGTR2_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galicore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggalicore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" 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</rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galagalicore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggalagalicore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_LPSGTR4_kt" sboTerm="SBO:0000176" id="R_LPSGTR4_kt" name="glycosyltransferase_IV__LPS_core_synthesis___glucosyl__1__6__glucosyl__1__3_glucosyl__1__4__alanyl___2__galactosyl__1_3Hep1__heptosyl__1_3__heptosyl__1_5__kdo2_lipidA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_LPSGTR4_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ggalagalicore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpscore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_LYSRC" sboTerm="SBO:0000176" id="R_LYSRC" name="lysine_racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LYSRC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LYSRC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYSTRS" sboTerm="SBO:0000176" id="R_LYSTRS" name="Lysyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LYSTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LYSTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnalys_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lystrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1496"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_L_LACD2" sboTerm="SBO:0000176" id="R_L_LACD2" name="L_Lactate_dehydrogenase__ubiquinone_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_L_LACD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/L_LACD2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101274"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lac__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4736"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_L_LACt2rpp" sboTerm="SBO:0000185" id="R_L_LACt2rpp" name="L_lactate_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_L_LACt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/L_LACt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_L_LACtex" sboTerm="SBO:0000185" id="R_L_LACtex" name="L_lactate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_L_LACtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/L_LACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lac__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lac__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MACCOAT" sboTerm="SBO:0000176" id="R_MACCOAT" name="2_Methylacetyl_CoA_thiolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MACCOAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MACCOAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2maacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MAGLIPA160ex" sboTerm="SBO:0000176" id="R_MAGLIPA160ex" name="acylglycerol_lipase__extracellular_hexadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MAGLIPA160ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag160_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAGLIPA180ex" sboTerm="SBO:0000176" id="R_MAGLIPA180ex" name="acylglycerol_lipase__extracellular_octadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MAGLIPA180ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag180_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAGLIPA181d9ex" sboTerm="SBO:0000176" id="R_MAGLIPA181d9ex" name="acylglycerol_lipase__extracellular_nC181d9_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MAGLIPA181d9ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag181d9_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcea_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAGLIPA182d9d12ex" sboTerm="SBO:0000176" id="R_MAGLIPA182d9d12ex" name="acylglycerol_lipase__extracellular_nC181d9d12_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MAGLIPA182d9d12ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1ag182d9d12_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MALDt2_2pp" sboTerm="SBO:0000185" id="R_MALDt2_2pp" name="D_Malate_transport_via_proton_symport__2_H___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALDt2_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALDt2_2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_mal__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mal__D_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MALDtex" sboTerm="SBO:0000185" id="R_MALDtex" name="D_Malate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mal__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MALEI" sboTerm="SBO:0000176" id="R_MALEI" name="Maleate_cis_trans_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALEI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALEI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_male_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3942"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MALS" sboTerm="SBO:0000176" id="R_MALS" name="malate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101348"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0356"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MALt2_2pp" sboTerm="SBO:0000185" id="R_MALt2_2pp" name="Malate_transport_via_proton_symport__2_H___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALt2_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALt2_2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_mal__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1188"/> <fbc:geneProductRef fbc:geneProduct="PP_2056"/> <fbc:geneProductRef fbc:geneProduct="PP_2255"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MALtex" sboTerm="SBO:0000185" id="R_MALtex" name="Malate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mal__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MANabcpp" sboTerm="SBO:0000185" id="R_MANabcpp" name="mannose_transport_via_ABC_transporter" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MANabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_man_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_man_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MANtex" sboTerm="SBO:0000185" id="R_MANtex" name="D_mannose_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MANtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MANtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_man_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_man_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MCBTFR1" sboTerm="SBO:0000176" id="R_MCBTFR1" name="mycobactin_reductase__fadh_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCBTFR1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3mcbtt_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mcbtt_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MCBTFR2" sboTerm="SBO:0000176" id="R_MCBTFR2" name="mycobactin_reductase__fmn_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCBTFR2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3mcbtt_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mcbtt_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MCBTFUexs" sboTerm="SBO:0000176" id="R_MCBTFUexs" name="mycobactin_Fe_loading_reaction__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCBTFUexs"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_mcbtt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3mcbtt_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCBTFabcpp" sboTerm="SBO:0000185" id="R_MCBTFabcpp" name="mycobactin_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCBTFabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3mcbtt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3mcbtt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2593"/> <fbc:geneProductRef fbc:geneProduct="PP_2594"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2592"/> <fbc:geneProductRef fbc:geneProduct="PP_2591"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2417"/> <fbc:geneProductRef fbc:geneProduct="PP_2416"/> <fbc:geneProductRef fbc:geneProduct="PP_2418"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCBTFtex" sboTerm="SBO:0000185" id="R_MCBTFtex" name="mycobactin_secretion__to_extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCBTFtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_mcbtt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mcbtt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MCBTFtonex" sboTerm="SBO:0000185" id="R_MCBTFtonex" name="mycobactin_transport_via_ton_system__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCBTFtonex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3mcbtt_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3mcbtt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2590"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCBTFtpp" sboTerm="SBO:0000185" id="R_MCBTFtpp" name="mycobactin_secretion__to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCBTFtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_mcbtt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mcbtt_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MCITS" sboTerm="SBO:0000176" id="R_MCITS" name="2_methylcitrate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MCITS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MCITS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mcit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2335"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCSNtex" sboTerm="SBO:0000185" id="R_MCSNtex" name="cytosine_transport_in_via_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCSNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5mcsn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5mcsn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MCSNtpp" sboTerm="SBO:0000185" id="R_MCSNtpp" name="cytosine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCSNtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5mcsn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5mcsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3187"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDH" sboTerm="SBO:0000176" id="R_MDH" name="malate_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MDH"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105018"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0654"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDH2" sboTerm="SBO:0000176" id="R_MDH2" name="Malate_dehydrogenase__ubiquinone_8_as_acceptor_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MDH2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MDH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0751"/> <fbc:geneProductRef fbc:geneProduct="PP_1251"/> <fbc:geneProductRef fbc:geneProduct="PP_2925"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDNTHAep" sboTerm="SBO:0000185" id="R_MDNTHAep" name="N__2_methyl_3_5_dinitrophenyl__4_methyl_3_5_dinitroaniline_extrusion_pump" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MDNTHAep"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2m35mdntha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3425"/> <fbc:geneProductRef fbc:geneProduct="PP_3426"/> <fbc:geneProductRef fbc:geneProduct="PP_3427"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MECDPDH5" sboTerm="SBO:0000176" id="R_MECDPDH5" name="2C_methyl_D_erythritol_2_4_cyclodiphosphate_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MECDPDH5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MECDPDH5"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101450"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2mecdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_flxr_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_flxso_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2mb4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1625"/> <fbc:geneProductRef fbc:geneProduct="PP_0853"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MECDPS" sboTerm="SBO:0000176" id="R_MECDPS" name="2_C_methyl_D_erythritol_2_4_cyclodiphosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MECDPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MECDPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2p4c2me_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mecdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1618"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MELIBt3ipp" sboTerm="SBO:0000185" id="R_MELIBt3ipp" name="melibiose_transport_in_via_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MELIBt3ipp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MELIBt3ipp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_melib_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_melib_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2428"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MEOHtex" sboTerm="SBO:0000185" id="R_MEOHtex" name="Methanol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MEOHtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MEOHtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MEOHtrpp" sboTerm="SBO:0000185" id="R_MEOHtrpp" name="Methanol_reversible_transport_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MEOHtrpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MEOHtrpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MEPCT" sboTerm="SBO:0000176" id="R_MEPCT" name="2_C_methyl_D_erythritol_4_phosphate_cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MEPCT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MEPCT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2me4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4c2me_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1614"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METAT" sboTerm="SBO:0000176" id="R_METAT" name="methionine_adenosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METAT"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101471"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4967"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METDabcpp" sboTerm="SBO:0000185" id="R_METDabcpp" name="D_methionine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METDabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METDabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_met__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_met__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0113"/> <fbc:geneProductRef fbc:geneProduct="PP_0114"/> <fbc:geneProductRef fbc:geneProduct="PP_0112"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0219"/> <fbc:geneProductRef fbc:geneProduct="PP_0220"/> <fbc:geneProductRef fbc:geneProduct="PP_0221"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METOX1s" sboTerm="SBO:0000176" id="R_METOX1s" name="methionine_oxidation__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METOX1s"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METOX1s"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METOX2s" sboTerm="SBO:0000176" id="R_METOX2s" name="methionine_oxidation_2__spontaneous_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METOX2s"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METOX2s"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METTRS" sboTerm="SBO:0000176" id="R_METTRS" name="Methionyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnamet_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mettrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METabcpp" sboTerm="SBO:0000185" id="R_METabcpp" name="L_methionine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0113"/> <fbc:geneProductRef fbc:geneProduct="PP_0114"/> <fbc:geneProductRef fbc:geneProduct="PP_0112"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0219"/> <fbc:geneProductRef fbc:geneProduct="PP_0220"/> <fbc:geneProductRef fbc:geneProduct="PP_0221"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METtex" sboTerm="SBO:0000185" id="R_METtex" name="L_methionine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_met__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_met__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MG2tex" sboTerm="SBO:0000185" id="R_MG2tex" name="magnesium__Mg2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MG2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MG2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mg2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mg2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MG2tpp" sboTerm="SBO:0000185" id="R_MG2tpp" name="magnesium__2__transport_in_via_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MG2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MG2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mg2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mg2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4471"/> <fbc:geneProductRef fbc:geneProduct="PP_1843"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLDCP1App" sboTerm="SBO:0000176" id="R_MLDCP1App" name="murein_L_D_carboxypeptidase__murein5px4p___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MLDCP1App"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLDCP1App"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein3px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MLDCP1Bpp" sboTerm="SBO:0000176" id="R_MLDCP1Bpp" name="murein_L_D_carboxypeptidase__murein4p4p___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MLDCP1Bpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLDCP1Bpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4p4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MLDCP2App" sboTerm="SBO:0000176" id="R_MLDCP2App" name="murein_L_D_carboxypeptidase__murein5p5p___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MLDCP2App"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLDCP2App"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MLDCP2Bpp" sboTerm="SBO:0000176" id="R_MLDCP2Bpp" name="murein_L_D_carboxypeptidase__murein4p3p___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MLDCP2Bpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLDCP2Bpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4p3p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein3p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MLDCP3App" sboTerm="SBO:0000176" id="R_MLDCP3App" name="murein_L_D_carboxypeptidase__murein5px3p___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MLDCP3App"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLDCP3App"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px3p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein3px3p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MLDEP1pp" sboTerm="SBO:0000176" id="R_MLDEP1pp" name="murein_L_D_endopeptidase__murein3px3p___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MLDEP1pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLDEP1pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein3px3p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein3p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MLDEP2pp" sboTerm="SBO:0000176" id="R_MLDEP2pp" name="murein_L_D_endopeptidase__murein5px3p___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MLDEP2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLDEP2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px3p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein5p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MMETt2pp" sboTerm="SBO:0000185" id="R_MMETt2pp" name="S_methylmethionine_permease__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MMETt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MMETt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_mmet_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mmet_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0660"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MMETtex" sboTerm="SBO:0000185" id="R_MMETtex" name="S_methyl_L_methionine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MMETtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MMETtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mmet_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mmet_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MN2t3pp" sboTerm="SBO:0000185" id="R_MN2t3pp" name="manganese__Mn2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MN2t3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MN2t3pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101669"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_mn2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mn2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MNabc_1" sboTerm="SBO:0000185" id="R_MNabc_1" name="manganese_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MNabc_1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MNabc_1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mn2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mn2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3801"/> <fbc:geneProductRef fbc:geneProduct="PP_3802"/> <fbc:geneProductRef fbc:geneProduct="PP_3803"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MNtex" sboTerm="SBO:0000185" id="R_MNtex" name="Manganese__Mn2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mn2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mn2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MOBDabcpp" sboTerm="SBO:0000185" id="R_MOBDabcpp" name="molybdate_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MOBDabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MOBDabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mobd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mobd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3828"/> <fbc:geneProductRef fbc:geneProduct="PP_3829"/> <fbc:geneProductRef fbc:geneProduct="PP_3830"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOBDtex" sboTerm="SBO:0000185" id="R_MOBDtex" name="molybdate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MOBDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MOBDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mobd_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mobd_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MOGDS" sboTerm="SBO:0000176" id="R_MOGDS" name="molybdopterin_guanine_dinucleotide_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MOGDS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MOGDS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96315"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_moco_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mocogdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3457"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOHMT" sboTerm="SBO:0000176" id="R_MOHMT" name="3_methyl_2_oxobutanoate_hydroxymethyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MOHMT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MOHMT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dhp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4699"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTAT" sboTerm="SBO:0000176" id="R_MPTAT" name="molybdopterin_adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MPTAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MPTAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mpt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mptamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2122"/> <fbc:geneProductRef fbc:geneProduct="PP_4600"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MSULR" sboTerm="SBO:0000176" id="R_MSULR" name="Metanesulfonate_reductase__NADPH2_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MSULR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MSULR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ch4s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_mso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="3" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MTHFC" sboTerm="SBO:0000176" id="R_MTHFC" name="methenyltetrahydrofolate_cyclohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MTHFC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MTHFC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2265"/> <fbc:geneProductRef fbc:geneProduct="PP_1945"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTHFD" sboTerm="SBO:0000176" id="R_MTHFD" name="methylenetetrahydrofolate_dehydrogenase__NADP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MTHFD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MTHFD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1945"/> <fbc:geneProductRef fbc:geneProduct="PP_2265"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTOLDOX" sboTerm="SBO:0000176" id="R_MTOLDOX" name="benzoate_1_2_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MTOLDOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MTOLDOX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_m_tol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dh3mchc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="pWW0_102"/> <fbc:geneProductRef fbc:geneProduct="pWW0_101"/> <fbc:geneProductRef fbc:geneProduct="pWW0_100"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTRI" sboTerm="SBO:0000176" id="R_MTRI" name="5_methylthioribose_1_phosphate_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MTRI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MTRI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5mdr1p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5mdru1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1766"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MXMO" sboTerm="SBO:0000176" id="R_MXMO" name="toluene_monooxygenase__pWW0_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MXMO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MXMO"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mbzalc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="pWW0_129"/> <fbc:geneProductRef fbc:geneProduct="pWW0_130"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MXYLt5" sboTerm="SBO:0000185" id="R_MXYLt5" name="m_xylene__transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MXYLt5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MXYLt6" sboTerm="SBO:0000185" id="R_MXYLt6" name="m_xylene_transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MXYLt6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_M_XYLtpp" sboTerm="SBO:0000185" id="R_M_XYLtpp" name="passive_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_M_XYLtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/M_XYLtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_M_Xylt1" sboTerm="SBO:0000185" id="R_M_Xylt1" name="m_xylene__outer_membrane_porin_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_M_Xylt1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/M_Xylt1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NACHY" sboTerm="SBO:0000176" id="R_NACHY" name="Nicotinic_acid_6_Hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NACHY"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NACHY"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3947"/> <fbc:geneProductRef fbc:geneProduct="PP_3948"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NACt1pp" sboTerm="SBO:0000185" id="R_NACt1pp" name="Nicotinic_acid_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NACt1pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NACt1pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3940"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NACtex" sboTerm="SBO:0000185" id="R_NACtex" name="Nicotinic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NACtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3939"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADDP" sboTerm="SBO:0000176" id="R_NADDP" name="NAD_diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NADDP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NADDP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nmn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4029"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADK" sboTerm="SBO:0000176" id="R_NADK" name="NAD_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NADK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NADK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2012"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADN" sboTerm="SBO:0000176" id="R_NADN" name="NAD_nucleosidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NADN"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NADN"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adprib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ncam_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NADS1" sboTerm="SBO:0000176" id="R_NADS1" name="NAD_synthase__nh3_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NADS1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NADS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dnad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4869"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAMNPP" sboTerm="SBO:0000176" id="R_NAMNPP" name="nicotinic_acid_mononucleotide_pyrophosphorylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NAMNPP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NAMNPP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4868"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAt3_1p5pp" sboTerm="SBO:0000185" id="R_NAt3_1p5pp" name="sodium_proton_antiporter__HNA_is_15___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NAt3_1p5pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NAt3_1p5pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="3" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4031"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAt3_1pp" sboTerm="SBO:0000185" id="R_NAt3_1pp" name="sodium_proton_antiporter__HNA_is_11___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_NAt3_1pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1587"/> <fbc:geneProductRef fbc:geneProduct="PP_4974"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAt3_2pp" sboTerm="SBO:0000185" id="R_NAt3_2pp" name="sodium_proton_antiporter__HNA_is_2___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NAt3_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NAt3_2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1132"/> <fbc:geneProductRef fbc:geneProduct="PP_3958"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAt3pp" sboTerm="SBO:0000185" id="R_NAt3pp" name="sodium_transport_out_via_proton_antiport__cytoplasm_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NAt3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NAt3pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2230"/> <fbc:geneProductRef fbc:geneProduct="PP_2229"/> <fbc:geneProductRef fbc:geneProduct="PP_2228"/> <fbc:geneProductRef fbc:geneProduct="PP_2227"/> <fbc:geneProductRef fbc:geneProduct="PP_2226"/> <fbc:geneProductRef fbc:geneProduct="PP_2225"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAtex" sboTerm="SBO:0000185" id="R_NAtex" name="sodium_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NBAHH_ir" sboTerm="SBO:0000176" id="R_NBAHH_ir" name="Nalpha__beta_alanyl__L_histidine_hydrolase_IR" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NBAHH_ir"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NBAHH_ir"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_carn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3844"/> <fbc:geneProductRef fbc:geneProduct="PP_0203"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NCBMPTSabcpp" sboTerm="SBO:0000185" id="R_NCBMPTSabcpp" name="Carbamoylputrescine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_NCBMPTSabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_Ncbmpts_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Ncbmpts_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NCBMPTStex" sboTerm="SBO:0000185" id="R_NCBMPTStex" name="Carbamoylputrescine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_NCBMPTStex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_Ncbmpts_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Ncbmpts_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NDPK1" sboTerm="SBO:0000176" id="R_NDPK1" name="nucleoside_diphosphate_kinase__ATPGDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK2" sboTerm="SBO:0000176" id="R_NDPK2" name="nucleoside_diphosphate_kinase__ATPUDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK3" sboTerm="SBO:0000176" id="R_NDPK3" name="nucleoside_diphosphate_kinase__ATPCDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK4" sboTerm="SBO:0000176" id="R_NDPK4" name="nucleoside_diphosphate_kinase__ATPdTDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK4"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dttp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK5" sboTerm="SBO:0000176" id="R_NDPK5" name="nucleoside_diphosphate_kinase__ATPdGDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgtp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK6" sboTerm="SBO:0000176" id="R_NDPK6" name="nucleoside_diphosphate_kinase__ATPdUDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK6"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dutp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK7" sboTerm="SBO:0000176" id="R_NDPK7" name="nucleoside_diphosphate_kinase__ATPdCDP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK7"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dctp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK8" sboTerm="SBO:0000176" id="R_NDPK8" name="nucleoside_diphosphate_kinase__ATPdADP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_datp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NFMLDF" sboTerm="SBO:0000176" id="R_NFMLDF" name="N_Formyl_maleate_deformylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NFMLDF"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NFMLDF"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3943"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NH4t3pp" sboTerm="SBO:0000185" id="R_NH4t3pp" name="ammonia_transport_out_via_proton_antiport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_NH4t3pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5066"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="ammonia_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NH4tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NH4tpp" sboTerm="SBO:0000185" id="R_NH4tpp" name="ammonia_reversible_transport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NH4tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5233"/> <fbc:geneProductRef fbc:geneProduct="PP_2106"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NI2t3pp" sboTerm="SBO:0000185" id="R_NI2t3pp" name="nickle__Ni2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NI2t3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NI2t3pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101956"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NI2t4pp" sboTerm="SBO:0000185" id="R_NI2t4pp" name="nickel_transport_out_via_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NI2t4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NI2t4pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101957"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0026"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NI2tex" sboTerm="SBO:0000185" id="R_NI2tex" name="nickel_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NI2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NI2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ni2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ni2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NI2tpp" sboTerm="SBO:0000185" id="R_NI2tpp" name="nickel__2__transport_in_via_permease__no_H_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NI2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NI2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ni2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ni2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1843"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NMNAT" sboTerm="SBO:0000176" id="R_NMNAT" name="nicotinamide_nucleotide_adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NMNAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NMNAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nmn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4810"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NNATr" sboTerm="SBO:0000176" id="R_NNATr" name="nicotinate_nucleotide_adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NNATr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NNATr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dnad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4810"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NNDMBRT" sboTerm="SBO:0000176" id="R_NNDMBRT" name="Nicotinate_nucleotide_dimethylbenzimidazole_phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NNDMBRT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NNDMBRT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmbzid_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5prdmbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1679"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NO2t2rpp" sboTerm="SBO:0000185" id="R_NO2t2rpp" name="nitrite_transport_in_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NO2t2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO2t2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_no2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1156"/> <fbc:geneProductRef fbc:geneProduct="PP_2092"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NO2tex" sboTerm="SBO:0000185" id="R_NO2tex" name="nitrite_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NO2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NO3t2pp" sboTerm="SBO:0000185" id="R_NO3t2pp" name="nitrate_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NO3t2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO3t2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2092"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NO3tex" sboTerm="SBO:0000185" id="R_NO3tex" name="nitrate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NO3tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO3tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no3_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no3_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NODOx" sboTerm="SBO:0000176" id="R_NODOx" name="nitric_oxide_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NODOx"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NODOx"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0808"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NODOy" sboTerm="SBO:0000176" id="R_NODOy" name="nitric_oxide_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NODOy"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NODOy"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0808"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NONAtexi" sboTerm="SBO:0000185" id="R_NONAtexi" name="nonanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_NONAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nona_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nona_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NOtex" sboTerm="SBO:0000185" id="R_NOtex" name="nitric_oxide_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NOtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NOtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NOtpp" sboTerm="SBO:0000185" id="R_NOtpp" name="NO_transport__diffusion_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NOtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NOtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NTD1" sboTerm="SBO:0000176" id="R_NTD1" name="5__nucleotidase__dUMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dump_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_duri_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD10" sboTerm="SBO:0000176" id="R_NTD10" name="5__nucleotidase__XMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD10"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xtsn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD11" sboTerm="SBO:0000176" id="R_NTD11" name="5__nucleotidase__IMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD11"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD11"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ins_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD12" sboTerm="SBO:0000176" id="R_NTD12" name="5__nucleotidase__dIMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD12"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dimp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_din_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD2" sboTerm="SBO:0000176" id="R_NTD2" name="5__nucleotidase__UMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94933"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD3" sboTerm="SBO:0000176" id="R_NTD3" name="5__nucleotidase__dCMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dcmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcyt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD4" sboTerm="SBO:0000176" id="R_NTD4" name="5__nucleotidase__CMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD4"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cytd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD5" sboTerm="SBO:0000176" id="R_NTD5" name="5__nucleotidase__dTMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dtmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thymd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD6" sboTerm="SBO:0000176" id="R_NTD6" name="5__nucleotidase__dAMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD6"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_damp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dad_2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD7" sboTerm="SBO:0000176" id="R_NTD7" name="5__nucleotidase__AMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD7"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD8" sboTerm="SBO:0000176" id="R_NTD8" name="5__nucleotidase__dGMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD9" sboTerm="SBO:0000176" id="R_NTD9" name="5__nucleotidase__GMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTD9"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTP1" sboTerm="SBO:0000176" id="R_NTP1" name="nucleoside_triphosphatase__ATP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTP1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTP1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4903"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTP10" sboTerm="SBO:0000176" id="R_NTP10" name="nucleoside_triphosphatase__ITP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTP10"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTP10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_idp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4903"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTP3" sboTerm="SBO:0000176" id="R_NTP3" name="nucleoside_triphosphatase__GTP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTP3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTP3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4903"/> <fbc:geneProductRef fbc:geneProduct="PP_4639"/> <fbc:geneProductRef fbc:geneProduct="PP_4893"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTP5" sboTerm="SBO:0000176" id="R_NTP5" name="nucleoside_triphosphatase__CTP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTP5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTP5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4903"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP10" sboTerm="SBO:0000176" id="R_NTPP10" name="Nucleoside_triphosphate_pyrophosphorylase__ditp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTPP10"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTPP10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dimp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP11" sboTerm="SBO:0000176" id="R_NTPP11" name="Nucleoside_triphosphate_pyrophosphorylase__xtp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTPP11"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTPP11"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP9" sboTerm="SBO:0000176" id="R_NTPP9" name="Nucleoside_triphosphate_pyrophosphorylase__itp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTPP9"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTPP9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPTP1" sboTerm="SBO:0000176" id="R_NTPTP1" name="Nucleoside_triphosphate_tripolyhydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTPTP1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTPTP1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dgtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2102"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPTP2" sboTerm="SBO:0000176" id="R_NTPTP2" name="Nucleoside_triphosphate_tripolyhydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NTPTP2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTPTP2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2102"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="oxygen_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_O2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_O2tpp" sboTerm="SBO:0000185" id="R_O2tpp" name="o2_transport_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_O2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OAAt2_2pp" sboTerm="SBO:0000185" id="R_OAAt2_2pp" name="oxaloacetate_transport__periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OAAt2_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OAAt2_2pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102101"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_oaa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OAAtex" sboTerm="SBO:0000185" id="R_OAAtex" name="oxaloacetate_transport__extracellular" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OAAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OAAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_oaa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oaa_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OARGabcpp" sboTerm="SBO:0000185" id="R_OARGabcpp" name="oxo_arginine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OARGabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5g2oxpt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5g2oxpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OARGtex" sboTerm="SBO:0000185" id="R_OARGtex" name="oxo_arginine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OARGtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5g2oxpt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5g2oxpt_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OBDHc" sboTerm="SBO:0000176" id="R_OBDHc" name="2_Oxobutanoate_dehydrogenase__cytosolic" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OBDHc"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OBDHc"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OCAALD" sboTerm="SBO:0000176" id="R_OCAALD" name="4_oxalcitromalate_aldolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OCAALD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OCAALD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_oca_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2514"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCBT2i" sboTerm="SBO:0000176" id="R_OCBT2i" name="ornithine_carbamoyltransferase__catabolic_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OCBT2i"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_citr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cbp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1000"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCBT" sboTerm="SBO:0000176" id="R_OCBT" name="ornithine_carbamoyltransferase__irreversible" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OCBT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OCBT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cbp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_citr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1079"/> <fbc:geneProductRef fbc:geneProduct="PP_1000"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCDCAtexi" sboTerm="SBO:0000185" id="R_OCDCAtexi" name="Octadecanoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OCDCAtexi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OCDCAtexi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ocdca_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCDCEAtexi" sboTerm="SBO:0000185" id="R_OCDCEAtexi" name="Octadecenoate__n_C181__transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OCDCEAtexi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OCDCEAtexi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ocdcea_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCTAtex" sboTerm="SBO:0000185" id="R_OCTAtex" name="Octanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OCTAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OCTAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_octa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_octa_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CTECOAI8" sboTerm="SBO:0000176" id="R_CTECOAI8" name="Octadecenoyl_coa_cis_trans_isomerization" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CTECOAI8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CTECOAI8"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96942"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_od2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OGMEACPD" sboTerm="SBO:0000176" id="R_OGMEACPD" name="3_Oxo_glutaryl_ACP_methyl_ester_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OGMEACPD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OGMEACPD"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102159"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hgmeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_egmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OHCUDC2" sboTerm="SBO:0000176" id="R_OHCUDC2" name="2_oxo_4_hydroxy_4_carboxy_5_ureidoimidazoline_decarboxylase__alltn_R_producing_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OHCUDC2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5houdic_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alltn__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OHPBAT" sboTerm="SBO:0000176" id="R_OHPBAT" name="O_Phospho_4_hydroxy_L_threonine2_oxoglutarate_aminotransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OHPBAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OHPBAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ohpb_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phthr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1768"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OHPHM" sboTerm="SBO:0000176" id="R_OHPHM" name="2_octaprenyl_6_hydroxyphenol_methylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OHPHM"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OHPHM"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ohph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2omph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1765"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMAHY" sboTerm="SBO:0000176" id="R_OMAHY" name="4_oxalmesaconate_hydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMAHY"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMAHY"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_omaenol_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oca_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2515"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMAIS" sboTerm="SBO:0000176" id="R_OMAIS" name="4_oxalmesaconate_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMAIS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMAIS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_omaketo_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_omaenol_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2513"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMBZLM" sboTerm="SBO:0000176" id="R_OMBZLM" name="2_Octaprenyl_6_methoxy_benzoquinol_methylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMBZLM"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMBZLM"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ombzl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ommbl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5011"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMCDC" sboTerm="SBO:0000176" id="R_OMCDC" name="2_Oxo_4_methyl_3_carboxypentanoate_decarboxylation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMCDC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMCDC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3c4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMMBLHX" sboTerm="SBO:0000176" id="R_OMMBLHX" name="2_Octaprenyl_3_methyl_6_methoxy_1_4_benzoquinol_hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMMBLHX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMMBLHX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ommbl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2omhmbl_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0427"/> <fbc:geneProductRef fbc:geneProduct="PP_5197"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMPDC" sboTerm="SBO:0000176" id="R_OMPDC" name="orotidine_5__phosphate_decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMPDC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMPDC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orot5p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1815"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMPHHX" sboTerm="SBO:0000176" id="R_OMPHHX" name="2_octaprenyl_6_methoxyphenol_hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMPHHX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMPHHX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2omph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ombzl_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5199"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OP4ENH" sboTerm="SBO:0000176" id="R_OP4ENH" name="2_oxopent_4_enoate_hydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OP4ENH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OP4ENH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_op4en_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4h2opntn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_094"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OP4ENH2" sboTerm="SBO:0000176" id="R_OP4ENH2" name="2_oxopent_4_enoate_hydratase_p_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OP4ENH2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OP4ENH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2hchd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hoxoh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_094"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OP4ENH3" sboTerm="SBO:0000176" id="R_OP4ENH3" name="2_oxopent_4_enoate_hydratase_m_xylene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OP4ENH3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chpd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4h2oxov_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_094"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OPMEACPD" sboTerm="SBO:0000176" id="R_OPMEACPD" name="3_Oxo_pimeloyl_ACP_methyl_ester_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OPMEACPD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OPMEACPD"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102206"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hpmeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_epmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1602"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORNtex" sboTerm="SBO:0000185" id="R_ORNtex" name="ornithine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ORNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ORNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OROTt2_2pp" sboTerm="SBO:0000185" id="R_OROTt2_2pp" name="Orotate_transport_via_proton_symport__2_H___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OROTt2_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OROTt2_2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_orot_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_orot_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2056"/> <fbc:geneProductRef fbc:geneProduct="PP_2255"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OROTtex" sboTerm="SBO:0000185" id="R_OROTtex" name="Orotate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OROTtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OROTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orot_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orot_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ORPT" sboTerm="SBO:0000176" id="R_ORPT" name="orotate_phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ORPT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ORPT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orot5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orot_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5291"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OSKTabcpp" sboTerm="SBO:0000185" id="R_OSKTabcpp" name="O_specific_antigen__B_band__Pputida_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OSKTabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_unquivo_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_unquivo_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1778"/> <fbc:geneProductRef fbc:geneProduct="PP_1779"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OSKTpp" sboTerm="SBO:0000185" id="R_OSKTpp" name="O_specific_antigen__B_band__Pputida_transport_via_flipase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OSKTpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_unquivo_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_unquivo_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OXAtpp" sboTerm="SBO:0000185" id="R_OXAtpp" name="OxalateH_antiporter__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OXAtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_oxa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OXFOtex" sboTerm="SBO:0000185" id="R_OXFOtex" name="OxalateFormate_antiporter__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OXFOtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OXFOtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_oxa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oxa_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OXPTNDH" sboTerm="SBO:0000176" id="R_OXPTNDH" name="glutarate_semialdehydeNAD_oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OXPTNDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OXPTNDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxptn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glutar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OXYLt5" sboTerm="SBO:0000185" id="R_OXYLt5" name="o_xylene_transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OXYLt5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_o_xyl_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OXYLt6" sboTerm="SBO:0000185" id="R_OXYLt6" name="o_xylene_transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OXYLt6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_o_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_O_XYLtppi" sboTerm="SBO:0000185" id="R_O_XYLtppi" name="methyltoluene_passive_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_O_XYLtppi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_o_xyl_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_O_Xylt1" sboTerm="SBO:0000185" id="R_O_Xylt1" name="o_xylene__outer_membrane_porin_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_O_Xylt1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o_xyl_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_o_xyl_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PA120abcpp" sboTerm="SBO:0000185" id="R_PA120abcpp" name="phosphatidate_transport_via_ABC_system__n_C120__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PA120abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PA120abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PA160abcpp" sboTerm="SBO:0000185" id="R_PA160abcpp" name="phosphatidate_transport_via_ABC_system__n_C160__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PA160abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PA160abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PA161abcpp" sboTerm="SBO:0000185" id="R_PA161abcpp" name="phosphatidate_transport_via_ABC_system__n_C161__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PA161abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PA161abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PA180abcpp" sboTerm="SBO:0000185" id="R_PA180abcpp" name="phosphatidate_transport_via_ABC_system__n_C180__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PA180abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PA180abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PA181abcpp" sboTerm="SBO:0000185" id="R_PA181abcpp" name="phosphatidate_transport_via_ABC_system__n_C181__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PA181abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PA181abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PACALDtex" sboTerm="SBO:0000185" id="R_PACALDtex" name="phenethylacetaldehyde_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PACALDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PACALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pacald_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pacald_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PACALtabcpp" sboTerm="SBO:0000185" id="R_PACALtabcpp" name="Phenylacetaldehyde_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PACALtabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pacald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pacald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3466"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2673"/> <fbc:geneProductRef fbc:geneProduct="PP_2676"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PACt3" sboTerm="SBO:0000185" id="R_PACt3" name="Phenylacetic_acid_transport_via_sodium_symport_MSF" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PACt3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PACt3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3272"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PALDO2" sboTerm="SBO:0000176" id="R_PALDO2" name="Phosphonoaldehyde_dehydrogenase___NADH_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PALDO2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pald_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phnac_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PALDP" sboTerm="SBO:0000176" id="R_PALDP" name="Phosphonoacetaldehyde_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PALDP"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pald_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2208"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PALGSKT" sboTerm="SBO:0000185" id="R_PALGSKT" name="Prealginate_biosynthesis_from_KT2440" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PALGSKT"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gdpmanur_c" stoichiometry="5" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdp_c" stoichiometry="5" constant="true"/> <speciesReference species="M_h_p" stoichiometry="5" constant="true"/> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1286"/> <fbc:geneProductRef fbc:geneProduct="PP_1287"/> <fbc:geneProductRef fbc:geneProduct="PP_1285"/> <fbc:geneProductRef fbc:geneProduct="PP_1282"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PANTS" sboTerm="SBO:0000176" id="R_PANTS" name="pantothenate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PANTS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PANTS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pant__R_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnto__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4700"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PAPA120" sboTerm="SBO:0000176" id="R_PAPA120" name="Phosphatidate_phosphatase__n_C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPA120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPA120"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102347"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr120_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PAPA140" sboTerm="SBO:0000176" id="R_PAPA140" name="Phosphatidate_phosphatase__n_C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPA140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPA140"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102348"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr140_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PAPA141" sboTerm="SBO:0000176" id="R_PAPA141" name="Phosphatidate_phosphatase__n_C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPA141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPA141"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102349"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr141_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PAPA160" sboTerm="SBO:0000176" id="R_PAPA160" name="Phosphatidate_phosphatase__n_C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPA160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPA160"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102350"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PAPA161" sboTerm="SBO:0000176" id="R_PAPA161" name="Phosphatidate_phosphatase__n_C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPA161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPA161"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102353"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr161_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PAPA180" sboTerm="SBO:0000176" id="R_PAPA180" name="Phosphatidate_phosphatase__n_C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPA180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPA180"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102354"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr180_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PAPA181" sboTerm="SBO:0000176" id="R_PAPA181" name="Phosphatidate_phosphatase__n_C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPA181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPA181"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102356"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PAPPT3" sboTerm="SBO:0000176" id="R_PAPPT3" name="phospho_N_acetylmuramoyl_pentapeptide_transferase__meso_2_6_diaminopimelate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPPT3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPPT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_udcpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ugmda_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_uagmda_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1334"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PAPSR" sboTerm="SBO:0000176" id="R_PAPSR" name="phosphoadenylyl_sulfate_reductase__thioredoxin_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPSR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPSR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_paps_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PAPSR2" sboTerm="SBO:0000176" id="R_PAPSR2" name="phosphoadenylyl_sulfate_reductase__glutaredoxin_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PAPSR2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPSR2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_grxrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_paps_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_grxox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_5054"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2328"/> <fbc:geneProductRef fbc:geneProduct="PP_2958"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PB2t5" sboTerm="SBO:0000185" id="R_PB2t5" name="Lead__Pb2__transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PB2t5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0043"/> <fbc:geneProductRef fbc:geneProduct="PP_0044"/> <fbc:geneProductRef fbc:geneProduct="PP_0045"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PB2t6" sboTerm="SBO:0000185" id="R_PB2t6" name="Lead__Pb2__transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PB2t6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0043"/> <fbc:geneProductRef fbc:geneProduct="PP_0044"/> <fbc:geneProductRef fbc:geneProduct="PP_0045"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PB2tex" sboTerm="SBO:0000185" id="R_PB2tex" name="Lead___Pb2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PB2tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pb2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pb2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PB2tpp" sboTerm="SBO:0000185" id="R_PB2tpp" name="Lead_transport_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PB2tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pb2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pb2_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PC17M" sboTerm="SBO:0000176" id="R_PC17M" name="precorrin_3B_C17_methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PC17M"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PC17M"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre3b_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_pre4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4826"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PC6AR" sboTerm="SBO:0000176" id="R_PC6AR" name="precorrin_6A_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PC6AR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PC6AR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre6a_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre6b_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4832"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDE1" sboTerm="SBO:0000176" id="R_PDE1" name="3__5__cyclic_nucleotide_phosphodiesterase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PDE1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PDE1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_camp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PDX5POi" sboTerm="SBO:0000176" id="R_PDX5POi" name="pyridoxine_5__phosphate_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PDX5POi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PDX5POi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdx5p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1129"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDX5PS" sboTerm="SBO:0000176" id="R_PDX5PS" name="Pyridoxine_5__phosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PDX5PS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PDX5PS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dxyl5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phthr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdx5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0402"/> <fbc:geneProductRef fbc:geneProduct="PP_1436"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PE120abcpp" sboTerm="SBO:0000185" id="R_PE120abcpp" name="phosphatidylethanolamine_transport_via_ABC_system__n_C120__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PE120abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE120abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102441"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe120_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PE140abcpp" sboTerm="SBO:0000185" id="R_PE140abcpp" name="phosphatidylethanolamine_transport_via_ABC_system__n_C140__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PE140abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE140abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102442"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe140_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PE141abcpp" sboTerm="SBO:0000185" id="R_PE141abcpp" name="phosphatidylethanolamine_transport_via_ABC_system__n_C141__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PE141abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE141abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102443"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe141_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PE160abcpp" sboTerm="SBO:0000185" id="R_PE160abcpp" name="phosphatidylethanolamine_transport_via_ABC_system__n_C160__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PE160abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE160abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe160_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PE161abcpp" sboTerm="SBO:0000185" id="R_PE161abcpp" name="phosphatidylethanolamine_transport_via_ABC_system__n_C161__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PE161abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE161abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102445"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PE180abcpp" sboTerm="SBO:0000185" id="R_PE180abcpp" name="phosphatidylethanolamine_transport_via_ABC_system__n_C180__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PE180abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE180abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe180_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PE181abcpp" sboTerm="SBO:0000185" id="R_PE181abcpp" name="phosphatidylethanolamine_transport_via_ABC_system__n_C181__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PE181abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE181abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102459"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe181_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PEAL2tabc" sboTerm="SBO:0000185" id="R_PEAL2tabc" name="phenylethylethanol_abc_transporter" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PEAL2tabc"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pea_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2673"/> <fbc:geneProductRef fbc:geneProduct="PP_2676"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PEALtabc" sboTerm="SBO:0000185" id="R_PEALtabc" name="Phenylethanol_extrusiont_via_ABC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PEALtabc"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pea_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pea_e" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2669"/> <fbc:geneProductRef fbc:geneProduct="PP_2668"/> <fbc:geneProductRef fbc:geneProduct="PP_2667"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PEALtex" sboTerm="SBO:0000185" id="R_PEALtex" name="Phenylethanol_transport_difusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PEALtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pea_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pea_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PEAMNtex" sboTerm="SBO:0000185" id="R_PEAMNtex" name="phenethylamine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PEAMNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PEAMNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_peamn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PEAtabcpp" sboTerm="SBO:0000185" id="R_PEAtabcpp" name="Phenyl_ethylamine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PEAtabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_peamn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3466"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PERD" sboTerm="SBO:0000176" id="R_PERD" name="Erythronate_4_phosphate__4per__dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PERD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PERD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4per_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ohpb_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2117"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PETNT161_kt" sboTerm="SBO:0000176" id="R_PETNT161_kt" name="phosphoethanolamine_transferase__c_C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PETNT161_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hpphlipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr161_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hethapphlipa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PETNT181_kt" sboTerm="SBO:0000176" id="R_PETNT181_kt" name="phosphoethanolamine_transferase__c_C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PETNT181_kt"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hpphlipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe181_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hethapphlipa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PG120abcpp" sboTerm="SBO:0000185" id="R_PG120abcpp" name="phosphatidylglycerol_transport_via_ABC_system__n_C120__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PG120abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG120abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102516"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg120_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PG140abcpp" sboTerm="SBO:0000185" id="R_PG140abcpp" name="phosphatidylglycerol_transport_via_ABC_system__n_C140__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PG140abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG140abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102517"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg140_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PG141abcpp" sboTerm="SBO:0000185" id="R_PG141abcpp" name="phosphatidylglycerol_transport_via_ABC_system__n_C141__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PG141abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG141abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102518"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg141_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PG160abcpp" sboTerm="SBO:0000185" id="R_PG160abcpp" name="phosphatidylglycerol_transport_via_ABC_system__n_C160__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PG160abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG160abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg160_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PG161abcpp" sboTerm="SBO:0000185" id="R_PG161abcpp" name="phosphatidylglycerol_transport_via_ABC_system__n_C161__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PG161abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG161abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PG180abcpp" sboTerm="SBO:0000185" id="R_PG180abcpp" name="phosphatidylglycerol_transport_via_ABC_system__n_C180__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PG180abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG180abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg180_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PG181abcpp" sboTerm="SBO:0000185" id="R_PG181abcpp" name="phosphatidylglycerol_transport_via_ABC_system__n_C181__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PG181abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG181abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102524"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg181_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGAMT" sboTerm="SBO:0000176" id="R_PGAMT" name="phosphoglucosamine_mutase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGAMT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGAMT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gam1p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gam6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4716"/> <fbc:geneProductRef fbc:geneProduct="PP_5288"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGI" sboTerm="SBO:0000176" id="R_PGI" name="glucose_6_phosphate_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102535"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1808"/> <fbc:geneProductRef fbc:geneProduct="PP_4701"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGK" sboTerm="SBO:0000176" id="R_PGK" name="phosphoglycerate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGK"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94821"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3pg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4963"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGLYCP" sboTerm="SBO:0000176" id="R_PGLYCP" name="Phosphoglycolate_phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGLYCP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGLYCP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2pglyc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0416"/> <fbc:geneProductRef fbc:geneProduct="PP_1764"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGM" sboTerm="SBO:0000176" id="R_PGM" name="phosphoglycerate_mutase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGM"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGM"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97765"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2pg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3pg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5056"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGP120abcpp" sboTerm="SBO:0000185" id="R_PGP120abcpp" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C120__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGP120abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGP120abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102550"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp120_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGP140abcpp" sboTerm="SBO:0000185" id="R_PGP140abcpp" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C140__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGP140abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGP140abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102551"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp140_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGP141abcpp" sboTerm="SBO:0000185" id="R_PGP141abcpp" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C141__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGP141abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGP141abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102552"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp141_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp141_p" stoichiometry="1" constant="true"/> 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<listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp160_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGP161abcpp" sboTerm="SBO:0000185" id="R_PGP161abcpp" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C161__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGP161abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGP161abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGP180abcpp" sboTerm="SBO:0000185" id="R_PGP180abcpp" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C180__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGP180abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGP180abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp180_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGP181abcpp" sboTerm="SBO:0000185" id="R_PGP181abcpp" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C181__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGP181abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGP181abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102558"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp181_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4935"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEDCAtexi" sboTerm="SBO:0000185" id="R_PHEDCAtexi" name="1__Phenyldecanoic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHEDCAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phedca_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phedca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEHPAtexi" sboTerm="SBO:0000185" id="R_PHEHPAtexi" name="7_Phenylheptanoic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHEHPAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phehpa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phehpa_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEHXAtexi" sboTerm="SBO:0000185" id="R_PHEHXAtexi" name="6_Phenylhexanoic_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHEHXAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phehxa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phehxa_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEME2abcpp" sboTerm="SBO:0000185" id="R_PHEME2abcpp" name="protoheme_transport_via_ABC_system__periplasm_to_cytosol_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHEME2abcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4689"/> <fbc:geneProductRef fbc:geneProduct="PP_4687"/> <fbc:geneProductRef fbc:geneProduct="PP_4688"/> <fbc:geneProductRef fbc:geneProduct="PP_4686"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEMEabcpp" sboTerm="SBO:0000185" id="R_PHEMEabcpp" name="protoheme_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PHEMEabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEMEabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4327"/> <fbc:geneProductRef fbc:geneProduct="PP_4326"/> <fbc:geneProductRef fbc:geneProduct="PP_4325"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEMEtiex" sboTerm="SBO:0000185" id="R_PHEMEtiex" name="protoheme_transport_irreversible_out_via_diffusion__periplasm_to_extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PHEMEtiex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEMEtiex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pheme_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PHEMEtonex" sboTerm="SBO:0000185" id="R_PHEMEtonex" name="Heme_ton_dependend_transport_system__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHEMEtonex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1006"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHENONAtexi" sboTerm="SBO:0000185" id="R_PHENONAtexi" name="9_Phenylnonanoic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHENONAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phenona_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phenona_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEOCTAtexi" sboTerm="SBO:0000185" id="R_PHEOCTAtexi" name="8_Phenyloctanoic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHEOCTAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pheocta_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference 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</listOfReactants> <listOfProducts> <speciesReference species="M_phept_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHETRS" sboTerm="SBO:0000176" id="R_PHETRS" name="Phenylalanyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PHETRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHETRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaphe_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phetrna_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2469"/> <fbc:geneProductRef fbc:geneProduct="PP_2470"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEt2rpp" sboTerm="SBO:0000185" id="R_PHEt2rpp" name="L_phenylalanine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PHEt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> <fbc:geneProductRef fbc:geneProduct="PP_4495"/> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEtex" sboTerm="SBO:0000185" id="R_PHEtex" name="L_phenylalanine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PHEtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phe__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phe__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PHNACH" sboTerm="SBO:0000176" id="R_PHNACH" name="phosphonoacetate_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHNACH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phnac_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0686"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHPYRtex" sboTerm="SBO:0000185" id="R_PHPYRtex" name="Phenyl_pyruvate_transport_ex____pp" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHPYRtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phpyr_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phpyr_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PHPYRtpp" sboTerm="SBO:0000185" id="R_PHPYRtpp" name="phenylpyruvate_transport_in_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHPYRtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PIt2rpp" sboTerm="SBO:0000185" id="R_PIt2rpp" name="phosphate_reversible_transport_via_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PIt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PIt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1373"/> <fbc:geneProductRef fbc:geneProduct="PP_4103"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PItex" sboTerm="SBO:0000185" id="R_PItex" name="phosphate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PItex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PItex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pi_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0037"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PIuabcpp" sboTerm="SBO:0000185" id="R_PIuabcpp" name="phosphate_transport_via_ABC_system__uptake__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PIuabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PIuabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2658"/> <fbc:geneProductRef fbc:geneProduct="PP_2659"/> <fbc:geneProductRef fbc:geneProduct="PP_2657"/> <fbc:geneProductRef fbc:geneProduct="PP_2656"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5327"/> <fbc:geneProductRef fbc:geneProduct="PP_5326"/> <fbc:geneProductRef fbc:geneProduct="PP_5328"/> <fbc:geneProductRef fbc:geneProduct="PP_5329"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLIPA1E160pp" sboTerm="SBO:0000176" id="R_PLIPA1E160pp" name="Phospholipase_A1__phosphatidylethanolamine__n_C160___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA1E160pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1E160pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe160_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA1E161pp" sboTerm="SBO:0000176" id="R_PLIPA1E161pp" name="Phospholipase_A1__phosphatidylethanolamine__n_C161___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA1E161pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1E161pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102978"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA1E180pp" sboTerm="SBO:0000176" id="R_PLIPA1E180pp" name="Phospholipase_A1__phosphatidylethanolamine__n_C180___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA1E180pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1E180pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA1E181d11pp" sboTerm="SBO:0000176" id="R_PLIPA1E181d11pp" name="Phospholipase_A1__phosphatidylethanolamine__n_C181___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PLIPA1E181d11pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe181_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpe181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA1G160pp" sboTerm="SBO:0000176" id="R_PLIPA1G160pp" name="Phospholipase_A1__phosphatidylglycerol__n_C160___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA1G160pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1G160pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102984"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg160_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA1G161pp" sboTerm="SBO:0000176" id="R_PLIPA1G161pp" name="Phospholipase_A1__phosphatidylglycerol__n_C161___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA1G161pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1G161pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102985"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA1G180pp" sboTerm="SBO:0000176" id="R_PLIPA1G180pp" name="Phospholipase_A1__phosphatidylglycerol__n_C180___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA1G180pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1G180pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102986"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA1G181d11pp" sboTerm="SBO:0000176" id="R_PLIPA1G181d11pp" name="Phospholipase_A1__phosphatidylglycerol__n_C181___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PLIPA1G181d11pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2agpg181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2E160pp" sboTerm="SBO:0000176" id="R_PLIPA2E160pp" name="Phospholipase_A2__phosphatidylethanolamine__n_C160___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA2E160pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2E160pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102999"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe160_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpe160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2E161pp" sboTerm="SBO:0000176" id="R_PLIPA2E161pp" name="Phospholipase_A2__phosphatidylethanolamine__n_C161___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA2E161pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2E161pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103000"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpe161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2E180pp" sboTerm="SBO:0000176" id="R_PLIPA2E180pp" name="Phospholipase_A2__phosphatidylethanolamine__n_C180___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA2E180pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2E180pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103001"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpe180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2E181d11pp" sboTerm="SBO:0000176" id="R_PLIPA2E181d11pp" name="Phospholipase_A2__phosphatidylethanolamine__n_C181___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PLIPA2E181d11pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pe181_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpe181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2G160pp" sboTerm="SBO:0000176" id="R_PLIPA2G160pp" name="Phospholipase_A2__phosphatidylglycerol__n_C160___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA2G160pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2G160pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103006"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg160_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpg160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2G161pp" sboTerm="SBO:0000176" id="R_PLIPA2G161pp" name="Phospholipase_A2__phosphatidylglycerol__n_C161___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA2G161pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2G161pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103007"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpg161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2G180pp" sboTerm="SBO:0000176" id="R_PLIPA2G180pp" name="Phospholipase_A2__phosphatidylglycerol__n_C180___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PLIPA2G180pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2G180pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103008"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpg180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLIPA2G181d11pp" sboTerm="SBO:0000176" id="R_PLIPA2G181d11pp" name="Phospholipase_A2__phosphatidylglycerol__n_C181___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PLIPA2G181d11pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1agpg181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PLPSLpp" sboTerm="SBO:0000176" id="R_PLPSLpp" name="Pseudomonas_LPS_O_antigen_ligase__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PLPSLpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lpscore_kt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_unquivo_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lpspput_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4936"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLPSabctex" sboTerm="SBO:0000185" id="R_PLPSabctex" name="P_putida_exopolysacharide_LPS___transport_via_ABC_system__periplasm_to_extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PLPSabctex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpspput_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpspput_e" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0954"/> <fbc:geneProductRef fbc:geneProduct="PP_0953"/> <fbc:geneProductRef fbc:geneProduct="PP_0955"/> <fbc:geneProductRef fbc:geneProduct="PP_0982"/> <fbc:geneProductRef fbc:geneProduct="PP_0983"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PMDPHT" sboTerm="SBO:0000176" id="R_PMDPHT" name="pyrimidine_phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PMDPHT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PMDPHT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aprbu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4r5au_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PMPK" sboTerm="SBO:0000176" id="R_PMPK" name="phosphomethylpyrimidine_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PMPK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PMPK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4ampm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mahmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4782"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PNTK" sboTerm="SBO:0000176" id="R_PNTK" name="pantothenate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PNTK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PNTK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnto__R_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4ppan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0438"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PNTOt4pp" sboTerm="SBO:0000185" id="R_PNTOt4pp" name="Pantothenate_sodium_symporter__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PNTOt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PNTOt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pnto__R_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnto__R_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4524"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PNTOtex" sboTerm="SBO:0000185" id="R_PNTOtex" name="Pantothenate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PNTOtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PNTOtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pnto__R_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pnto__R_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPAt4pp" sboTerm="SBO:0000185" id="R_PPAt4pp" name="NaPropionate_symporter__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPAt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPAt4pp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103093"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ppa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPAtex" sboTerm="SBO:0000185" id="R_PPAtex" name="propionate_transport_via_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPAtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103094"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ppa_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppa_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPC" sboTerm="SBO:0000176" id="R_PPC" name="phosphoenolpyruvate_carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPC"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99645"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1505"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPCK" sboTerm="SBO:0000176" id="R_PPCK" name="phosphoenolpyruvate_carboxykinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPCK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPCK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0253"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPItex" sboTerm="SBO:0000185" id="R_PPItex" name="Diphosphate_transporter__periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPItex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ppi_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0037"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPIuabcpp" sboTerm="SBO:0000185" id="R_PPIuabcpp" name="phosphate_transport_via_ABC_system__uptake__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPIuabcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5327"/> <fbc:geneProductRef fbc:geneProduct="PP_5326"/> <fbc:geneProductRef fbc:geneProduct="PP_5328"/> <fbc:geneProductRef fbc:geneProduct="PP_5329"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2658"/> <fbc:geneProductRef fbc:geneProduct="PP_2659"/> <fbc:geneProductRef fbc:geneProduct="PP_2657"/> <fbc:geneProductRef fbc:geneProduct="PP_2656"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPK2r" sboTerm="SBO:0000176" id="R_PPK2r" name="polyphosphate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPK2r"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPK50_B" sboTerm="SBO:0000176" id="R_PPK50_B" name="polyphosphate_utilization__GDP_dependent_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPK50_B"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gdp_c" stoichiometry="47" constant="true"/> <speciesReference species="M_ppi50_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gtp_c" stoichiometry="47" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPK50r" sboTerm="SBO:0000176" id="R_PPK50r" name="polyphosphate_kinase__PolyP_synthesis_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPK50r"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="47" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="47" constant="true"/> <speciesReference species="M_ppi50_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPKr" sboTerm="SBO:0000176" id="R_PPKr" name="polyphosphate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPKr"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPPGO" sboTerm="SBO:0000176" id="R_PPPGO" name="protoporphyrinogen_oxidase__aerobic_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPPGO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPPGO"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96882"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o2_c" stoichiometry="1.5" constant="true"/> <speciesReference species="M_pppg9_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/> <speciesReference species="M_ppp9_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPRDNDH" sboTerm="SBO:0000176" id="R_PPRDNDH" name="Piperideine_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPRDNDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPRDNDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pprdn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPYRDC" sboTerm="SBO:0000176" id="R_PPYRDC" name="Phenylpyruvate_decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPYRDC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPYRDC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pacald_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PQQAC" sboTerm="SBO:0000176" id="R_PQQAC" name="Peptide_pqqA_ligase__glutamate_tyrosine_ligase__" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PQQAC"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pqqA_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pqqAc_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0380"/> <fbc:geneProductRef fbc:geneProduct="PP_0376"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PQQFEP" sboTerm="SBO:0000176" id="R_PQQFEP" name="PqqF_endopeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PQQFEP"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="4" constant="true"/> <speciesReference species="M_pqqAc_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4pqq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tripeptide_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0381"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PQQH2S" sboTerm="SBO:0000176" id="R_PQQH2S" name="pyrroloquinoline_quinone_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PQQH2S"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1pqq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="2" constant="true"/> 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species="M_pqqh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PQQtpp" sboTerm="SBO:0000185" id="R_PQQtpp" name="pyrrolo_quinoline_quinone_transport_inner_membrane" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PQQtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pqq_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PRAIS" sboTerm="SBO:0000176" id="R_PRAIS" name="phosphoribosylaminoimidazole_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRAIS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRAIS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fpram_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_air_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1665"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRAIi" sboTerm="SBO:0000176" id="R_PRAIi" name="phosphoribosylanthranilate_isomerase__irreversible_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRAIi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRAIi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pran_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2cpr5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1995"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRAMPC" sboTerm="SBO:0000176" id="R_PRAMPC" name="phosphoribosyl_AMP_cyclohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRAMPC"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRAMPC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prbamp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prfp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5014"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRASCSi" sboTerm="SBO:0000176" id="R_PRASCSi" name="phosphoribosylaminoimidazolesuccinocarboxamide_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRASCSi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRASCSi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aizc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25aics_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1240"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRATPP" sboTerm="SBO:0000176" id="R_PRATPP" name="phosphoribosyl_ATP_pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRATPP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRATPP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prbatp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prbamp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5015"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRFGS" sboTerm="SBO:0000176" id="R_PRFGS" name="phosphoribosylformylglycinamidine_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRFGS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRFGS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fpram_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1037"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRMICI" sboTerm="SBO:0000176" id="R_PRMICI" name="1__5_phosphoribosyl__5__5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRMICI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRMICI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prfp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prlp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0292"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROTRS" sboTerm="SBO:0000176" id="R_PROTRS" name="Prolyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PROTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PROTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnapro_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_protrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1205"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROabcpp" sboTerm="SBO:0000185" id="R_PROabcpp" name="L_proline_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PROabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PROabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2774"/> <fbc:geneProductRef fbc:geneProduct="PP_2775"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROt2rpp" sboTerm="SBO:0000185" id="R_PROt2rpp" name="L_proline_transport_in_via_proton_symport__periplam_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PROt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PROt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2914"/> <fbc:geneProductRef fbc:geneProduct="PP_5031"/> <fbc:geneProductRef fbc:geneProduct="PP_1059"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROt4pp" sboTerm="SBO:0000185" id="R_PROt4pp" name="NaProline_L_symporter__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PROt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PROt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4946"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRPPS" sboTerm="SBO:0000176" id="R_PRPPS" name="phosphoribosylpyrophosphate_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRPPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRPPS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103215"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSD120" sboTerm="SBO:0000176" id="R_PSD120" name="Phosphatidylserine_decarboxylase__n_C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSD120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSD120"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103229"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps120_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4908"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSD140" sboTerm="SBO:0000176" id="R_PSD140" name="Phosphatidylserine_decarboxylase__n_C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSD140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSD140"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103230"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps140_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4908"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSD141" sboTerm="SBO:0000176" id="R_PSD141" name="Phosphatidylserine_decarboxylase__n_C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSD141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSD141"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103231"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps141_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4908"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSD160" sboTerm="SBO:0000176" id="R_PSD160" name="Phosphatidylserine_decarboxylase__n_C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSD160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSD160"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps160_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4908"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSD161" sboTerm="SBO:0000176" id="R_PSD161" name="Phosphatidylserine_decarboxylase__n_C161_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSD161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSD161"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103233"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4908"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSD180" sboTerm="SBO:0000176" id="R_PSD180" name="Phosphatidylserine_decarboxylase__n_C180_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSD180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSD180"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103025"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps180_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4908"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSD181" sboTerm="SBO:0000176" id="R_PSD181" name="Phosphatidylserine_decarboxylase__n_C181_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSD181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSD181"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103029"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps181_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pe181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4908"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSERT" sboTerm="SBO:0000176" id="R_PSERT" name="phosphoserine_transaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PSERT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSERT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3php_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1768"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTA2" sboTerm="SBO:0000176" id="R_PTA2" name="Phosphate_acetyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTA2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTA2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTAr" sboTerm="SBO:0000176" id="R_PTAr" name="phosphotransacetylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTAr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTAr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTAtex" sboTerm="SBO:0000185" id="R_PTAtex" name="pentanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTAtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103320"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pta_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pta_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PTOLDOX" sboTerm="SBO:0000176" id="R_PTOLDOX" name="benzoate_1_2_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTOLDOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTOLDOX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_p_tol_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dh4mchc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="pWW0_102"/> <fbc:geneProductRef fbc:geneProduct="pWW0_101"/> <fbc:geneProductRef fbc:geneProduct="pWW0_100"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTPATi" sboTerm="SBO:0000176" id="R_PTPATi" name="pantetheine_phosphate_adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTPATi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTPATi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pan4p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5123"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCTA" sboTerm="SBO:0000176" id="R_PTRCTA" name="Putrescine_Transaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTRCTA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCTA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abutn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5182"/> <fbc:geneProductRef fbc:geneProduct="PP_2180"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCTA2" sboTerm="SBO:0000176" id="R_PTRCTA2" name="Putrescine_Transaminase__pyruvate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PTRCTA2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abutn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5182"/> <fbc:geneProductRef fbc:geneProduct="PP_2180"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCt2pp" sboTerm="SBO:0000185" id="R_PTRCt2pp" name="putrescine_transport_in_via_proton_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTRCt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1229"/> <fbc:geneProductRef fbc:geneProduct="PP_2586"/> <fbc:geneProductRef fbc:geneProduct="PP_2802"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCtex" sboTerm="SBO:0000185" id="R_PTRCtex" name="putrescine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTRCtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ptrc_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ptrc_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PTSLAtexi" sboTerm="SBO:0000185" id="R_PTSLAtexi" name="_6E__Octadec_6_enoic_acid_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PTSLAtexi"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ptsla_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ptsla_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PXMO" sboTerm="SBO:0000176" id="R_PXMO" name="toluene_monooxygenase__pWW0_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PXMO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PXMO"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_p_xyl_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mbzalc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="pWW0_129"/> <fbc:geneProductRef fbc:geneProduct="pWW0_130"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PXYLt5" sboTerm="SBO:0000185" id="R_PXYLt5" name="p_xylene__transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PXYLt5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_p_xyl_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PXYLt6" sboTerm="SBO:0000185" id="R_PXYLt6" name="p_xylene_transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PXYLt6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYAM5PO" sboTerm="SBO:0000176" id="R_PYAM5PO" name="pyridoxamine_5__phosphate_oxidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYAM5PO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYAM5PO"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyam5p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1129"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYDAMK" sboTerm="SBO:0000176" id="R_PYDAMK" name="pyridoxamine_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYDAMK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYDAMK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pydam_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyam5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5357"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYDAMtex" sboTerm="SBO:0000185" id="R_PYDAMtex" name="pyridoxamine_transport_via_diffusion__extracellular_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYDAMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYDAMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pydam_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pydam_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYDAMtpp" sboTerm="SBO:0000185" id="R_PYDAMtpp" name="pyridoxamine_import" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYDAMtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYDAMtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pydam_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pydam_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYDXK" sboTerm="SBO:0000176" id="R_PYDXK" name="pyridoxal_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYDXK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYDXK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pydx_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5357"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYDXNK" sboTerm="SBO:0000176" id="R_PYDXNK" name="pyridoxine_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYDXNK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYDXNK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pydxn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdx5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5357"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYNP2r" sboTerm="SBO:0000176" id="R_PYNP2r" name="pyrimidine_nucleoside_phosphorylase__uracil_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYNP2r"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYNP2r"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYOVD2tex" sboTerm="SBO:0000185" id="R_PYOVD2tex" name="Pyoverdine_export_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PYOVD2tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_kt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4211"/> <fbc:geneProductRef fbc:geneProduct="PP_4209"/> <fbc:geneProductRef fbc:geneProduct="PP_4210"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYOVDM1" sboTerm="SBO:0000176" id="R_PYOVDM1" name="Pyoverdine_maduration_I" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PYOVDM1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fbac_kt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pvdiq_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4214"/> <fbc:geneProductRef fbc:geneProduct="PP_4215"/> <fbc:geneProductRef fbc:geneProduct="PP_4212"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYOVDM2" sboTerm="SBO:0000176" id="R_PYOVDM2" name="Pyoverdine_maduration_2" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PYOVDM2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pvdiq_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pyovd_kt_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYOVDtex" sboTerm="SBO:0000185" id="R_PYOVDtex" name="Pyoverdine_export_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PYOVDtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4211"/> <fbc:geneProductRef fbc:geneProduct="PP_4209"/> <fbc:geneProductRef fbc:geneProduct="PP_4210"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYRDOX" sboTerm="SBO:0000176" id="R_PYRDOX" name="2_5_dihydroxypyridine_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYRDOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYRDOX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dhpyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3945"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYRZAM" sboTerm="SBO:0000176" id="R_PYRZAM" name="Pyrazinamidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYRZAM"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYRZAM"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_male_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3941"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYRt2rpp" sboTerm="SBO:0000185" id="R_PYRt2rpp" name="pyruvate_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYRt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYRt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYRtex" sboTerm="SBO:0000185" id="R_PYRtex" name="pyruvate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYRtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYRtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pyr_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pyr_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_P_XYLtpp" sboTerm="SBO:0000185" id="R_P_XYLtpp" name="p_methyltoluene_passive_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_P_XYLtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/P_XYLtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_p_xyl_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_P_Xylt1" sboTerm="SBO:0000185" id="R_P_Xylt1" name="p_xylene__outer_membrane_porin_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_P_Xylt1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/P_Xylt1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_QUEA1" sboTerm="SBO:0000176" id="R_QUEA1" name="S_adenosylmethioninetRNA_ribosyltransferase_isomerase__trnahis_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_QUEA1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnahis_preq34_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnahisqo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0832"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUEA2" sboTerm="SBO:0000176" id="R_QUEA2" name="S_adenosylmethioninetRNA_ribosyltransferase_isomerase__trnatyr_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_QUEA2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnatyr_preq34_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnatyrqo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0832"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUEA3" sboTerm="SBO:0000176" id="R_QUEA3" name="S_adenosylmethioninetRNA_ribosyltransferase_isomerase__trnaasp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_QUEA3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaasp_preq34_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaaspqo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0832"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUINtex" sboTerm="SBO:0000185" id="R_QUINtex" name="Quinate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_QUINtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3570"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUINtpp" sboTerm="SBO:0000185" id="R_QUINtpp" name="Quinateproton_symport_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_QUINtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/QUINtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2553"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_R05219" sboTerm="SBO:0000176" id="R_R05219" name="Precorrin_5__Precorrin_6X" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_R05219"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R05219"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre5_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre6a_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_R1PK" sboTerm="SBO:0000176" id="R_R1PK" name="ribose_1_phosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_R1PK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R1PK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r15bp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RBFSb" sboTerm="SBO:0000176" id="R_RBFSb" name="riboflavin_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_RBFSb"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RBFSb"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dmlz_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4r5au_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ribflv_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0517"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH10" sboTerm="SBO:0000176" id="R_RECOAH10" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxynonanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH10"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH11" sboTerm="SBO:0000176" id="R_RECOAH11" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenyldecanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH11"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdca2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH12" sboTerm="SBO:0000176" id="R_RECOAH12" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylnonanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH12"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnona2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH13" sboTerm="SBO:0000176" id="R_RECOAH13" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenyloctanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH13"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pocta2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH14" sboTerm="SBO:0000176" id="R_RECOAH14" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylheptanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH14"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_php2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH15" sboTerm="SBO:0000176" id="R_RECOAH15" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylhexanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH15"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxa2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH16" sboTerm="SBO:0000176" id="R_RECOAH16" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylpentanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH16"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH17" sboTerm="SBO:0000176" id="R_RECOAH17" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylbutanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH17"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH19" sboTerm="SBO:0000176" id="R_RECOAH19" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy_6_acetylthiohexanoyl_CoA" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH19"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6ath2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH2" sboTerm="SBO:0000176" id="R_RECOAH2" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyhexanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH20" sboTerm="SBO:0000176" id="R_RECOAH20" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy_4_acetylthiobutanoyl_CoA" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH20"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3h4atbcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4atb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH21" sboTerm="SBO:0000176" id="R_RECOAH21" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy__7Z__tetradecenyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH21"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tde2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH22" sboTerm="SBO:0000176" id="R_RECOAH22" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy__5Z__dodedecenyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH22"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH23" sboTerm="SBO:0000176" id="R_RECOAH23" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy__5Z__tetradecenyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH23"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH24" sboTerm="SBO:0000176" id="R_RECOAH24" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy_5Z_8Z__tetradecedienyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH24"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td58_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH25" sboTerm="SBO:0000176" id="R_RECOAH25" name="3_hydroxyacyl_Coa_dehydratase___R__3_hydroxy__6Z__dodedecenyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH25"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd6_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH26" sboTerm="SBO:0000176" id="R_RECOAH26" name="3_hydroxyacyl_Coa_dehydratase___R__3_hydroxy__4Z__decenyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH26"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dec4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH3" sboTerm="SBO:0000176" id="R_RECOAH3" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyoctanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH4" sboTerm="SBO:0000176" id="R_RECOAH4" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxydecanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH4"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH5" sboTerm="SBO:0000176" id="R_RECOAH5" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxydodecanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH6" sboTerm="SBO:0000176" id="R_RECOAH6" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxytetradecanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH7" sboTerm="SBO:0000176" id="R_RECOAH7" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyhexadecanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH7"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH8" sboTerm="SBO:0000176" id="R_RECOAH8" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxypentanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH8"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH9" sboTerm="SBO:0000176" id="R_RECOAH9" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyheptanoyl_CoA_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH9"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hp2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHA100tex" sboTerm="SBO:0000185" id="R_RHA100tex" name="R_3_Hydroxy_acid_transport_diffusion_C100__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA100tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdcaa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcaa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA100tpp" sboTerm="SBO:0000185" id="R_RHA100tpp" name="R_3_Hydroxy_acid_transport_diffusion_C100___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA100tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdcaa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcaa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA101tex" sboTerm="SBO:0000185" id="R_RHA101tex" name="R_3_Hydroxy_acid_transport_diffusion_C101__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA101tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R3hdec4e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4e_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA101tpp" sboTerm="SBO:0000185" id="R_RHA101tpp" name="R_3_Hydroxy_acid_transport_diffusion_C101___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA101tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R3hdec4e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4e_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA120tex" sboTerm="SBO:0000185" id="R_RHA120tex" name="R_3_Hydroxy_acid_transport_diffusion_C120__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA120tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdda_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdda_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA120tpp" sboTerm="SBO:0000185" id="R_RHA120tpp" name="R_3_Hydroxy_acid_transport_diffusion_C120___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA120tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdda_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdda_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA121d6tex" sboTerm="SBO:0000185" id="R_RHA121d6tex" name="R_3_Hydroxy_acid_transport_diffusion_C121d6__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA121d6tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdd6e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6e_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA121d6tpp" sboTerm="SBO:0000185" id="R_RHA121d6tpp" name="R_3_Hydroxy_acid_transport_diffusion_C121d6___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA121d6tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdd6e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6e_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA121tex" sboTerm="SBO:0000185" id="R_RHA121tex" name="R_3_Hydroxy_acid_transport_diffusion_C121__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA121tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdd5ea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd5ea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA121tpp" sboTerm="SBO:0000185" id="R_RHA121tpp" name="R_3_Hydroxy_acid_transport_diffusion_C121___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA121tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdd5ea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd5ea_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA140tex" sboTerm="SBO:0000185" id="R_RHA140tex" name="R_3_Hydroxy_acid_transport_diffusion_C140__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA140tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3httdca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3httdca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA140tpp" sboTerm="SBO:0000185" id="R_RHA140tpp" name="R_3_Hydroxy_acid_transport_diffusion_C140___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA140tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3httdca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3httdca_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA141d5tex" sboTerm="SBO:0000185" id="R_RHA141d5tex" name="R_3_Hydroxy_acid_transport_diffusion_C141d5_extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA141d5tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd5e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5e_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA141d5tpp" sboTerm="SBO:0000185" id="R_RHA141d5tpp" name="R_3_Hydroxy_acid_transport_diffusion_C141___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA141d5tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd5e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5e_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA141tex" sboTerm="SBO:0000185" id="R_RHA141tex" name="R_3_Hydroxy_acid_transport_diffusion_C141__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA141tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hcmrs7e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7e_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA141tpp" sboTerm="SBO:0000185" id="R_RHA141tpp" name="R_3_Hydroxy_acid_transport_diffusion_C141___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA141tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hcmrs7e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7e_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA142tex" sboTerm="SBO:0000185" id="R_RHA142tex" name="R_3_Hydroxy_acid_transport_diffusion_C142__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA142tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd58e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58e_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA142tpp" sboTerm="SBO:0000185" id="R_RHA142tpp" name="R_3_Hydroxy_acid_transport_diffusion_C142___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA142tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd58e_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58e_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA160tex" sboTerm="SBO:0000185" id="R_RHA160tex" name="R_3_Hydroxy_acid_transport_diffusion_C160__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA160tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhdca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhdca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA160tpp" sboTerm="SBO:0000185" id="R_RHA160tpp" name="R_3_Hydroxy_acid_transport_diffusion_C160___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA160tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhdca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhdca_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA40tex" sboTerm="SBO:0000185" id="R_RHA40tex" name="R_3_Hydroxy_acid_transport_diffusion_C40__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA40tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bhb_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bhb_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA40tpp" sboTerm="SBO:0000185" id="R_RHA40tpp" name="R_3_Hydroxy_acid_transport_diffusion_C40___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA40tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bhb_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA50tex" sboTerm="SBO:0000185" id="R_RHA50tex" name="R_3_Hydroxy_acid_transport_diffusion_C50__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA50tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA50tpp" sboTerm="SBO:0000185" id="R_RHA50tpp" name="R_3_Hydroxy_acid_transport_diffusion_C50___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA50tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpt_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA60tex" sboTerm="SBO:0000185" id="R_RHA60tex" name="R_3_Hydroxy_acid_transport_diffusion_C60__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA60tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhxa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhxa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA60tpp" sboTerm="SBO:0000185" id="R_RHA60tpp" name="R_3_Hydroxy_acid_transport_diffusion_C60___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA60tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhxa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhxa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA70tex" sboTerm="SBO:0000185" id="R_RHA70tex" name="R_3_Hydroxy_acid_transport_diffusion_C70__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA70tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhpa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA70tpp" sboTerm="SBO:0000185" id="R_RHA70tpp" name="R_3_Hydroxy_acid_transport_diffusion_C70___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA70tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhpa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA80tex" sboTerm="SBO:0000185" id="R_RHA80tex" name="R_3_Hydroxy_acid_transport_diffusion_C80__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA80tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hocta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA80tpp" sboTerm="SBO:0000185" id="R_RHA80tpp" name="R_3_Hydroxy_acid_transport_diffusion_C80___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA80tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hocta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocta_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA90tex" sboTerm="SBO:0000185" id="R_RHA90tex" name="R_3_Hydroxy_acid_transport_diffusion_C90__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA90tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hnonaa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonaa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHA90tpp" sboTerm="SBO:0000185" id="R_RHA90tpp" name="R_3_Hydroxy_acid_transport_diffusion_C90___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHA90tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hnonaa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonaa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHACOAE100" sboTerm="SBO:0000176" id="R_RHACOAE100" name="R_hydroxy_acyl_CoA_thioesterase__C100_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE100"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE120" sboTerm="SBO:0000176" id="R_RHACOAE120" name="R_hydroxy_acyl_CoA_thioesterase__C120_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE120"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdda_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE121" sboTerm="SBO:0000176" id="R_RHACOAE121" name="R_hydroxy_acyl_CoA_thioesterase__C121_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE121"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd5ea_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE121d6" sboTerm="SBO:0000176" id="R_RHACOAE121d6" name="R_hydroxy_acyl_CoA_thioesterase__C121d6_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE121d6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE140" sboTerm="SBO:0000176" id="R_RHACOAE140" name="R_hydroxy_acyl_CoA_thioesterase__C140_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE140"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3httdca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE141" sboTerm="SBO:0000176" id="R_RHACOAE141" name="R_hydroxy_acyl_CoA_thioesterase__C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE141"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE141d5" sboTerm="SBO:0000176" id="R_RHACOAE141d5" name="R_hydroxy_acyl_CoA_thioesterase__C141_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE141d5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE142" sboTerm="SBO:0000176" id="R_RHACOAE142" name="R_hydroxy_acyl_CoA_thioesterase__C142_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE142"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE160" sboTerm="SBO:0000176" id="R_RHACOAE160" name="R_hydroxy_acyl_CoA_thioesterase__C160_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE160"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhdca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE40" sboTerm="SBO:0000176" id="R_RHACOAE40" name="R_hydroxy_acyl_CoA_thioesterase__C40_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE40"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE50" sboTerm="SBO:0000176" id="R_RHACOAE50" name="R_hydroxy_acyl_CoA_thioesterase__C50_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE50"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE60" sboTerm="SBO:0000176" id="R_RHACOAE60" name="R_hydroxy_acyl_CoA_thioesterase__C60_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE60"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhxa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE70" sboTerm="SBO:0000176" id="R_RHACOAE70" name="R_hydroxy_acyl_CoA_thioesterase__C70_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE70"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE80" sboTerm="SBO:0000176" id="R_RHACOAE80" name="R_hydroxy_acyl_CoA_thioesterase__C80_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE80"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAE90" sboTerm="SBO:0000176" id="R_RHACOAE90" name="R_hydroxy_acyl_CoA_thioesterase__C90_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAE90"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP100" sboTerm="SBO:0000176" id="R_RHACOAEP100" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__Phenyl_C100_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP100"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpdeca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP101" sboTerm="SBO:0000176" id="R_RHACOAEP101" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__C101_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP101"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP40" sboTerm="SBO:0000176" id="R_RHACOAEP40" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__Phenyl_C40_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP40"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP50" sboTerm="SBO:0000176" id="R_RHACOAEP50" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__Phenyl_C50_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP50"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hppta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP60" sboTerm="SBO:0000176" id="R_RHACOAEP60" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__Phenyl_C60_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP60"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphxa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP70" sboTerm="SBO:0000176" id="R_RHACOAEP70" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__Phenyl_C70_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP70"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphpa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP80" sboTerm="SBO:0000176" id="R_RHACOAEP80" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__Phenyl_C80_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP80"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpocta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAEP90" sboTerm="SBO:0000176" id="R_RHACOAEP90" name="R_hydroxy_phenyl_acyl_CoA_thioesterase__Phenyl_C90_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAEP90"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpnona_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAET40" sboTerm="SBO:0000176" id="R_RHACOAET40" name="R_hydroxy_acetylthio_acyl_CoA_thioesterase__Acetylthio_C40_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAET40"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3h4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h4atba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAET60" sboTerm="SBO:0000176" id="R_RHACOAET60" name="R_hydroxy_acetylthio_acyl_CoA_thioesterase__Acetylthio_C60_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHACOAET60"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h6atha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHAP100tex" sboTerm="SBO:0000185" id="R_RHAP100tex" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C100__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP100tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpdeca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpdeca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP100tpp" sboTerm="SBO:0000185" id="R_RHAP100tpp" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C100___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP100tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpdeca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpdeca_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP40tex" sboTerm="SBO:0000185" id="R_RHAP40tex" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C40__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP40tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpba_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpba_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP40tpp" sboTerm="SBO:0000185" id="R_RHAP40tpp" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C40___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP40tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpba_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpba_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP50tex" sboTerm="SBO:0000185" id="R_RHAP50tex" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C50__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP50tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hppta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hppta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP50tpp" sboTerm="SBO:0000185" id="R_RHAP50tpp" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C50___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP50tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hppta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hppta_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP60tex" sboTerm="SBO:0000185" id="R_RHAP60tex" 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name="R_3_Hydroxyphenyl_acid_transport_diffusion_C70___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP70tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hphpa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphpa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP80tex" sboTerm="SBO:0000185" id="R_RHAP80tex" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C80__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP80tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpocta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpocta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP80tpp" sboTerm="SBO:0000185" id="R_RHAP80tpp" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C80___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP80tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpocta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpocta_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP90tex" sboTerm="SBO:0000185" id="R_RHAP90tex" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C90__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP90tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpnona_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpnona_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAP90tpp" sboTerm="SBO:0000185" id="R_RHAP90tpp" name="R_3_Hydroxyphenyl_acid_transport_diffusion_C90___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAP90tpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3hpnona_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpnona_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAT40tex" sboTerm="SBO:0000185" id="R_RHAT40tex" name="R_3_Hydroxyacetylthio_acid_transport_diffusion_C40__extracellularperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RHAT40tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_R_3h4atba_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h4atba_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RHAT40tpp" sboTerm="SBO:0000185" id="R_RHAT40tpp" 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<speciesReference species="M_rib__D_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_rib__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_RMD" sboTerm="SBO:0000176" id="R_RMD" name="GDP_4_dehydro_6_deoxy_D_mannose_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RMD"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gdpddman_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdpdrhmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1800"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RPI" sboTerm="SBO:0000176" id="R_RPI" name="ribose_5_phosphate_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_RPI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RPI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104084"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5150"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SADH" sboTerm="SBO:0000176" id="R_SADH" name="Succinylarginine_dihydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SADH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SADH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_sucarg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="2" constant="true"/> <speciesReference species="M_sucorn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4477"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SBO3rt2pp" sboTerm="SBO:0000185" id="R_SBO3rt2pp" name="antimonite_ireversible_transport_via_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_SBO3rt2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_sbo3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sbo3_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SBO3t2pp" sboTerm="SBO:0000185" id="R_SBO3t2pp" name="antimonite_transporter_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_SBO3t2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_sbo3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sbo3_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2717"/> <fbc:geneProductRef fbc:geneProduct="PP_1929"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SBO3tex" sboTerm="SBO:0000185" id="R_SBO3tex" name="antimonite_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_SBO3tex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_sbo3_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_sbo3_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SCYSDS" sboTerm="SBO:0000176" id="R_SCYSDS" name="SUF_Cysteine_desulfuration" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SCYSDS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SCYSDS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104298"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sufse_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sufsesh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1529"/> <fbc:geneProductRef fbc:geneProduct="PP_1528"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SCYSSL" sboTerm="SBO:0000176" id="R_SCYSSL" name="S_sulfo_L_cysteine_sulfite_lyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SCYSSL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SCYSSL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/> <speciesReference species="M_scys__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SDPDS" sboTerm="SBO:0000176" id="R_SDPDS" name="succinyl_diaminopimelate_desuccinylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SDPDS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SDPDS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sl26da_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_26dap_LL_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1525"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELCYSS" sboTerm="SBO:0000176" id="R_SELCYSS" name="selenocysteine_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SELCYSS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SELCYSS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_selnp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sertrna_sec_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sectrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0493"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELGTHR" sboTerm="SBO:0000176" id="R_SELGTHR" name="selenate_glutathione_reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SELGTHR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SELGTHR"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104319"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gthrd_c" stoichiometry="4" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_slnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgslnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SELGTHR2" sboTerm="SBO:0000176" id="R_SELGTHR2" name="selenate_glutathione_reductase_II" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SELGTHR2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SELGTHR2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104319"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dgslnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gslnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SELGTHR3" sboTerm="SBO:0000176" id="R_SELGTHR3" name="selenate_glutathione_reductase_III" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SELGTHR3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SELGTHR3"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104320"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gslnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_seln_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SELMETAT" sboTerm="SBO:0000176" id="R_SELMETAT" name="selenomethionine_adenosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SELMETAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SELMETAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_selmeth_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_seasmet_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4967"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELNPS" sboTerm="SBO:0000176" id="R_SELNPS" name="Selenophosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SELNPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SELNPS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_seln_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_selnp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0823"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELtex" sboTerm="SBO:0000185" id="R_SELtex" name="selenate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SELtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SELtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_sel_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SERTRS" sboTerm="SBO:0000176" id="R_SERTRS" name="Seryl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SERTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SERTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaser_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sertrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4000"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERTRS2" sboTerm="SBO:0000176" id="R_SERTRS2" name="Seryl_tRNA_synthetase__selenocystein_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SERTRS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SERTRS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnasecys_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sertrna_sec_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4000"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERt2rpp" sboTerm="SBO:0000185" id="R_SERt2rpp" name="L_serine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SERt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SERt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3589"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERt4pp" sboTerm="SBO:0000185" id="R_SERt4pp" name="L_serine_via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SERt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SERt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2443"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERtex" sboTerm="SBO:0000185" id="R_SERtex" name="L_serine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SERtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ser__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ser__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SGDS" sboTerm="SBO:0000176" id="R_SGDS" name="Succinylglutamate_desuccinylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SGDS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SGDS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucglu_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4475"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SGSAD" sboTerm="SBO:0000176" id="R_SGSAD" name="Succinylglutamic_semialdehyde_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SGSAD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SGSAD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucgsa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucglu_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4478"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHCHD2" sboTerm="SBO:0000176" id="R_SHCHD2" name="sirohydrochlorin_dehydrogenase__NAD_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SHCHD2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SHCHD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dscl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_scl_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3999"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHCHF" sboTerm="SBO:0000176" id="R_SHCHF" name="sirohydrochlorin_ferrochelatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SHCHF"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SHCHF"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_scl_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_sheme_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3999"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHEME2abcpp" sboTerm="SBO:0000185" id="R_SHEME2abcpp" name="siroheme_transport_via_ABC_system__periplasm_to_cytosol_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_SHEME2abcpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sheme_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sheme_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4689"/> <fbc:geneProductRef fbc:geneProduct="PP_4687"/> <fbc:geneProductRef fbc:geneProduct="PP_4688"/> <fbc:geneProductRef fbc:geneProduct="PP_4686"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHEMEtonex" sboTerm="SBO:0000185" id="R_SHEMEtonex" name="Siroheme_ton_dependend_transport_system__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_SHEMEtonex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_sheme_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sheme_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1006"/> <fbc:geneProductRef fbc:geneProduct="PP_5306"/> <fbc:geneProductRef fbc:geneProduct="PP_5307"/> <fbc:geneProductRef fbc:geneProduct="PP_5308"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHKK" sboTerm="SBO:0000176" id="R_SHKK" name="shikimate_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SHKK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SHKK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5079"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHSL1" sboTerm="SBO:0000176" id="R_SHSL1" name="O_succinylhomoserine_lyase__L_cysteine_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SHSL1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SHSL1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104381"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_suchms_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cyst__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0659"/> <fbc:geneProductRef fbc:geneProduct="PP_4594"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SKMt2pp" sboTerm="SBO:0000185" id="R_SKMt2pp" name="shikimate_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SKMt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SKMt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2553"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SKMtex" sboTerm="SBO:0000185" id="R_SKMtex" name="shikimate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SKMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SKMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_skm_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_skm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SO2tex" sboTerm="SBO:0000185" id="R_SO2tex" name="SO2_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SO2tpp" sboTerm="SBO:0000185" id="R_SO2tpp" name="SO2_transport_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO2tpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SO3abcpp" sboTerm="SBO:0000185" id="R_SO3abcpp" name="sulfite_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO3abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO3abcpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104458"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> <fbc:geneProductRef fbc:geneProduct="PP_4305"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SO3tex" sboTerm="SBO:0000185" id="R_SO3tex" name="sulfite_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO3tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO3tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so3_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so3_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SO4t2pp" sboTerm="SBO:0000185" id="R_SO4t2pp" name="sulfate_transport_in_via_proton_symport__periplasm_to_cytoplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO4t2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO4t2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0718"/> <fbc:geneProductRef fbc:geneProduct="PP_1407"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SO4t4pp_1" sboTerm="SBO:0000185" id="R_SO4t4pp_1" name="sulfate_transport_via_sodium_symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_SO4t4pp_1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3931"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SO4tex" sboTerm="SBO:0000185" id="R_SO4tex" name="sulfate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO4tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO4tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so4_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so4_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SOTA" sboTerm="SBO:0000176" id="R_SOTA" name="Succinylornithine_transaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SOTA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SOTA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucorn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucgsa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4481"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SPMDtex" sboTerm="SBO:0000185" id="R_SPMDtex" name="spermidine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SPMDtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SPMDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_spmd_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_spmd_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SUCCt2_2pp" sboTerm="SBO:0000185" id="R_SUCCt2_2pp" name="succinate_transport_via_proton_symport__2_H___periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SUCCt2_2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SUCCt2_2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_succ_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1188"/> <fbc:geneProductRef fbc:geneProduct="PP_2056"/> <fbc:geneProductRef fbc:geneProduct="PP_2255"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SUCCtex" sboTerm="SBO:0000185" id="R_SUCCtex" name="succinate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SUCCtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SUCCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_succ_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_succ_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SULR" sboTerm="SBO:0000176" id="R_SULR" name="sulfite_reductase__NADPH2_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SULR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SULR"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104651"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="5" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="3" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/> <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="3" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2371"/> <fbc:geneProductRef fbc:geneProduct="PP_0860"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SULabcpp" sboTerm="SBO:0000185" id="R_SULabcpp" name="sulfate_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SULabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SULabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> <fbc:geneProductRef fbc:geneProduct="PP_4305"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_T2DECAI" sboTerm="SBO:0000176" id="R_T2DECAI" name="trans_2_decenoyl_ACP_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_T2DECAI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/T2DECAI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104659"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tdec2eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdec3eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_T4HCINNMtex" sboTerm="SBO:0000185" id="R_T4HCINNMtex" name="T4HCINNM_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_T4HCINNMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/T4HCINNMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_T4hcinnm_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_T4hcinnm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_T4HCINNMtpp" sboTerm="SBO:0000185" id="R_T4HCINNMtpp" name="T4HCINNM_transport_via_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_T4HCINNMtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/T4HCINNMtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_T4hcinnm_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_T4hcinnm_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TAGLIPA160ex" sboTerm="SBO:0000176" id="R_TAGLIPA160ex" name="triacylglycerol_lipase__extracellular_hexadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TAGLIPA160ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> <speciesReference species="M_tag160_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr160_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAGLIPA180ex" sboTerm="SBO:0000176" id="R_TAGLIPA180ex" name="triacylglycerol_lipase__extracellular_octadecanoate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TAGLIPA180ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> <speciesReference species="M_tag180_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_12dgr180_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAGLIPA181d9ex" sboTerm="SBO:0000176" id="R_TAGLIPA181d9ex" name="triacylglycerol_lipase__extracellular_nC181d9_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TAGLIPA181d9ex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> <speciesReference species="M_tag181d9_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dag181d9_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcea_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAGLIPA182d9d12" sboTerm="SBO:0000176" id="R_TAGLIPA182d9d12" name="triacylglycerol_lipase__extracellular_nC181d9d12_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TAGLIPA182d9d12"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> <speciesReference species="M_tag182d9d12_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dag182d9d12_e" stoichiometry="1" constant="true"/> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4854"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TALA" sboTerm="SBO:0000176" id="R_TALA" name="transaldolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TALA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TALA"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97011"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_s7p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2168"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAUDO" sboTerm="SBO:0000176" id="R_TAUDO" name="Taurine_dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TAUDO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TAUDO"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_taur_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0230"/> <fbc:geneProductRef fbc:geneProduct="PP_0169"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TCYNTtex" sboTerm="SBO:0000185" id="R_TCYNTtex" name="Thiocyanate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TCYNTtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TCYNTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TCYNTtpp" sboTerm="SBO:0000185" id="R_TCYNTtpp" name="Thiocyanate_transport_via_diffusion__periplasm_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TCYNTtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CTECOAI6" sboTerm="SBO:0000176" id="R_CTECOAI6" name="tetradecenoyl_coa_cis_trans_isomerization" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CTECOAI6"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CTECOAI6"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96940"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDP" sboTerm="SBO:0000176" id="R_TDP" name="thiamin_pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TDP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TDP"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97803"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDSK2" sboTerm="SBO:0000176" id="R_TDSK2" name="Tetraacyldisaccharide_4_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TDSK2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipidAds_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipidA_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1900"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TGTASE1" sboTerm="SBO:0000176" id="R_TGTASE1" name="tRNA_guanosine34_transglycosylase__trnahis_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TGTASE1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_preq1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnahis_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gua_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnahis_preq34_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0833"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TGTASE2" sboTerm="SBO:0000176" id="R_TGTASE2" name="tRNA_guanosine34_transglycosylase__trnatyr_" reversible="false" fast="false" 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</reaction> <reaction metaid="R_TGTASE3" sboTerm="SBO:0000176" id="R_TGTASE3" name="tRNA_guanosine34_transglycosylase__trnaasp_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TGTASE3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_preq1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaasp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gua_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaasp_preq34_c" 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<rdf:Description rdf:about="#R_THFAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THFAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0671"/> <fbc:geneProductRef fbc:geneProduct="PP_0322"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THIORDXi" sboTerm="SBO:0000176" id="R_THIORDXi" name="hydrogen_peroxide_reductase__thioredoxin_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THIORDXi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THIORDXi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1235"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1235"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1235"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRTRS" sboTerm="SBO:0000176" id="R_THRTRS" name="Threonyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THRTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THRTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnathr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thrtrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2465"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRabcpp" sboTerm="SBO:0000185" id="R_THRabcpp" name="L_threonine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THRabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THRabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1137"/> <fbc:geneProductRef fbc:geneProduct="PP_1138"/> <fbc:geneProductRef fbc:geneProduct="PP_1139"/> <fbc:geneProductRef fbc:geneProduct="PP_1140"/> <fbc:geneProductRef fbc:geneProduct="PP_1141"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRt2pp" sboTerm="SBO:0000185" id="R_THRt2pp" name="L_threonine_efflux_transport_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THRt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THRt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2239"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRt4pp" sboTerm="SBO:0000185" id="R_THRt4pp" name="L_threonine__via_sodium_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THRt4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THRt4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2443"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRtex" sboTerm="SBO:0000185" id="R_THRtex" name="L_threonine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THRtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THRtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95025"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_thr__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_THYMt4pp" sboTerm="SBO:0000185" id="R_THYMt4pp" name="thymine_transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_THYMt4pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_thym_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thym_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4035"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THYMtex" sboTerm="SBO:0000185" id="R_THYMtex" name="thymine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THYMtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THYMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_thym_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_thym_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TMDS" sboTerm="SBO:0000176" id="R_TMDS" name="thymidylate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TMDS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TMDS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dump_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5141"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TMPPP" sboTerm="SBO:0000176" id="R_TMPPP" name="thiamine_phosphate_diphosphorylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TMPPP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TMPPP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2mahmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4mpetz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4783"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTHAC1" sboTerm="SBO:0000176" id="R_TNTHAC1" name="2_4_6_dinitrotoluene_meisenheimer_dihydrideTNT_derived_hydroxylamines_condensation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTHAC1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tntmdh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35dnta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTHAC2" sboTerm="SBO:0000176" id="R_TNTHAC2" name="2_4_6_dinitrotoluene_meisenheimer_dihydrideTNT_derived_hydroxylamines_condensation" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTHAC2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tntmdh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2m35mdntha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR2x" sboTerm="SBO:0000176" id="R_TNTR2x" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTR2x"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="2" constant="true"/> <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2486"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR3" sboTerm="SBO:0000176" id="R_TNTR3" name="TNT_nitroreductase_Meisenheimer_monohydride_complex_forming_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTR3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tnt_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tntmmh_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0920"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR4" sboTerm="SBO:0000176" id="R_TNTR4" name="TNT_nitroreductase_Meisenheimer_dihydride_complex_forming_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTR4"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tntmmh_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tntmdh_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0920"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTep" sboTerm="SBO:0000185" id="R_TNTep" name="2_4_6_trinitrotoluene_extrusion_pump" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTep"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3425"/> <fbc:geneProductRef fbc:geneProduct="PP_3426"/> <fbc:geneProductRef fbc:geneProduct="PP_3427"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTtex" sboTerm="SBO:0000185" id="R_TNTtex" name="Trinitrotoluene_transport_via_diffusion__extracellular_to_periplasm__irreversible" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tnt_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TNTtpp" sboTerm="SBO:0000185" id="R_TNTtpp" name="Trinitrotoluene_transport_via_diffusion__periplasm_to_cytosol__irreversible" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TNTtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tnt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TOLt5" sboTerm="SBO:0000185" id="R_TOLt5" name="Toluene__transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TOLt5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TOLt6" sboTerm="SBO:0000185" id="R_TOLt6" name="Toluene_transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TOLt6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TOLt7" sboTerm="SBO:0000185" id="R_TOLt7" name="Toluene__transport_out_via_proton_antiport__cytosolperiplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TOLt7"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3588"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TOLtex" sboTerm="SBO:0000185" id="R_TOLtex" name="toluene__outer_membrane_porin_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TOLtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TOLtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_127"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TOLtpp" sboTerm="SBO:0000185" id="R_TOLtpp" name="Toluene_transport_via_diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TOLtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TOLtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TPI" sboTerm="SBO:0000176" id="R_TPI" name="triose_phosphate_isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TPI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TPI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4715"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRPS1" sboTerm="SBO:0000176" id="R_TRPS1" name="tryptophan_synthase__indoleglycerol_phosphate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRPS1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRPS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3ig3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0082"/> <fbc:geneProductRef fbc:geneProduct="PP_0083"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRPS2" sboTerm="SBO:0000176" id="R_TRPS2" name="tryptophan_synthase__indole_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRPS2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRPS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_indole_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0082"/> <fbc:geneProductRef fbc:geneProduct="PP_0083"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRPS3" sboTerm="SBO:0000176" id="R_TRPS3" name="tryptophan_synthase__indoleglycerol_phosphate_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRPS3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRPS3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3ig3p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" 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</rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnatrp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trptrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1311"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRPt2rpp" sboTerm="SBO:0000185" id="R_TRPt2rpp" name="L_tryptophan_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRPt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRPt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRPtex" sboTerm="SBO:0000185" id="R_TRPtex" name="L_tryptophan_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRPtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRPtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_trp__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_trp__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TRYPTAOX" sboTerm="SBO:0000176" id="R_TRYPTAOX" name="Tryptamineoxygen_oxidoreductase_deaminating__flavin_containing_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRYPTAOX"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRYPTAOX"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trypta_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_id3acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4983"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TSULabcpp" sboTerm="SBO:0000185" id="R_TSULabcpp" name="thiosulfate_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TSULabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TSULabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tsul_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tsul_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> <fbc:geneProductRef fbc:geneProduct="PP_4305"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TSULtex" sboTerm="SBO:0000185" id="R_TSULtex" name="thiosulfate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TSULtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TSULtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tsul_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tsul_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TTDCAtexi" sboTerm="SBO:0000185" id="R_TTDCAtexi" name="Tetradecanoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TTDCAtexi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TTDCAtexi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ttdca_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ttdca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TTDCEAtexi" sboTerm="SBO:0000185" id="R_TTDCEAtexi" name="Tetradecenoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TTDCEAtexi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TTDCEAtexi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ttdcea_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ttdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TTRCYCt2pp" sboTerm="SBO:0000185" id="R_TTRCYCt2pp" name="Tetracycline_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TTRCYCt2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TTRCYCt5" sboTerm="SBO:0000185" id="R_TTRCYCt5" name="Tetracycline_transport_via_TtgABC__system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TTRCYCt5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TTRCYCt7pp" sboTerm="SBO:0000185" id="R_TTRCYCt7pp" name="Tetracycline_Efflux__MSF_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TTRCYCt7pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3588"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TTRCYCtex" sboTerm="SBO:0000185" id="R_TTRCYCtex" name="Tetracycline_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TTRCYCtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TTRCYCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TTRCYCtpp" sboTerm="SBO:0000185" id="R_TTRCYCtpp" name="Tetracycline_transport_via_TolC_system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TTRCYCtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TTRCYCtpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104977"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1386"/> <fbc:geneProductRef fbc:geneProduct="PP_1385"/> <fbc:geneProductRef fbc:geneProduct="PP_1384"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0958"/> <fbc:geneProductRef fbc:geneProduct="PP_0959"/> <fbc:geneProductRef fbc:geneProduct="PP_0960"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TUNGSabcpp" sboTerm="SBO:0000185" id="R_TUNGSabcpp" name="tungstate_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TUNGSabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TUNGSabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tungs_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tungs_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3828"/> <fbc:geneProductRef fbc:geneProduct="PP_3829"/> <fbc:geneProductRef fbc:geneProduct="PP_3830"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TUNGStex" sboTerm="SBO:0000185" id="R_TUNGStex" name="tungstate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TUNGStex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TUNGStex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tungs_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tungs_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TYRTRS" sboTerm="SBO:0000176" id="R_TYRTRS" name="tyrosyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TYRTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TYRTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnatyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyrtrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0436"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TYRt2rpp" sboTerm="SBO:0000185" id="R_TYRt2rpp" name="L_tyrosine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TYRt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TYRt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> <fbc:geneProductRef fbc:geneProduct="PP_4495"/> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TYRtex" sboTerm="SBO:0000185" id="R_TYRtex" name="L_tyrosine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TYRtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TYRtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tyr__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tyr__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3630"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_U23GAAT2" sboTerm="SBO:0000176" id="R_U23GAAT2" name="UDP_3_O__3_hydroxymyristoyl_glucosamine_acyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_U23GAAT2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/U23GAAT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hddecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u3dcga_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u23dddcga_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1601"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAAGDS" sboTerm="SBO:0000176" id="R_UAAGDS" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimelate_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UAAGDS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAAGDS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105013"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_26dap__M_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uamag_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ugmd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1332"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UACGAMDH2" sboTerm="SBO:0000176" id="R_UACGAMDH2" name="UDP_D_GlcNAc_4_6_dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UACGAMDH2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ukquivo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAGAAT2" sboTerm="SBO:0000176" id="R_UAGAAT2" name="UDP_N_acetylglucosamine_acyltransferase__hydroxydecanoyl_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UAGAAT2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAGAAT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hdecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u3dcaga_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1603"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAGCVT" sboTerm="SBO:0000176" id="R_UAGCVT" name="UDP_N_acetylglucosamine_1_carboxyvinyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UAGCVT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAGCVT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uaccg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0964"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAGDP" sboTerm="SBO:0000176" id="R_UAGDP" name="UDP_N_acetylglucosamine_diphosphorylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UAGDP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAGDP"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acgam1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5411"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAGPT3" sboTerm="SBO:0000176" id="R_UAGPT3" name="UDP_N_acetylglucosamine_N_acetylmuramyl__pentapeptide_pyrophosphoryl_undecaprenol_N_acetylglucosamine_transferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UAGPT3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAGPT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uagmda_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uaagmda_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1337"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAMAGS" sboTerm="SBO:0000176" id="R_UAMAGS" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamate_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UAMAGS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAMAGS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uama_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uamag_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1335"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDCPDP" sboTerm="SBO:0000176" id="R_UDCPDP" name="undecaprenyl_diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UDCPDP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPDP"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105043"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2862"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDCPDPS" sboTerm="SBO:0000176" id="R_UDCPDPS" name="Undecaprenyl_diphosphate_synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UDCPDPS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPDPS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105043"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_frdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ipdp_c" stoichiometry="8" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="8" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1595"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDCPDPpp" sboTerm="SBO:0000176" id="R_UDCPDPpp" name="undecaprenyl_diphosphatase__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UDCPDPpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPDPpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpp_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2862"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDCPGT" sboTerm="SBO:0000176" id="R_UDCPGT" name="undecaprenol_phosphate_galactosephosphotransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UDCPGT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPGT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_udcpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udcpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1804"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDCPPtppi" sboTerm="SBO:0000185" id="R_UDCPPtppi" name="undecaprenyl_phosphate_transport__cytoplasm_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UDCPPtppi"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPPtppi"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_udcpp_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udcpp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_UGLYCH" sboTerm="SBO:0000176" id="R_UGLYCH" name="Ureidoglycolate_hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UGLYCH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UGLYCH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_urdglyc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4288"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UHBZ1t_pp_" sboTerm="SBO:0000185" id="R_UHBZ1t_pp_" name="4_hydroxy_benzoate_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UHBZ1t_pp_"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hbz_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UHGADA2" sboTerm="SBO:0000176" id="R_UHGADA2" name="UDP_3_O_acetylglucosamine_deacetylase__hydroxydecanoil_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UHGADA2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UHGADA2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u3dcaga_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u3dcga_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1343"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UKQUIVORx" sboTerm="SBO:0000176" id="R_UKQUIVORx" name="UDP_2_acetamido_2_6_dideoxy_D_xylo_4_hexulose" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UKQUIVORx"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ukquivo_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uquivo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UKQUIVORy" sboTerm="SBO:0000176" id="R_UKQUIVORy" name="UDP_2_acetamido_2_6_dideoxy_D_xylo_4_hexulose" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UKQUIVORy"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ukquivo_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uquivo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UM4PCP" sboTerm="SBO:0000176" id="R_UM4PCP" name="UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate_D_alanine_L_D_carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UM4PCP"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UM4PCP"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105116"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_um4p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ugmd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4799"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UMPK" sboTerm="SBO:0000176" id="R_UMPK" name="UMP_kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UMPK"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UMPK"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105119"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1771"/> <fbc:geneProductRef fbc:geneProduct="PP_1593"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UPPDC1" sboTerm="SBO:0000176" id="R_UPPDC1" name="uroporphyrinogen_decarboxylase__uroporphyrinogen_III_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UPPDC1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UPPDC1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_uppg3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="4" constant="true"/> <speciesReference species="M_cpppg3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5074"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UQUIVOT" sboTerm="SBO:0000176" id="R_UQUIVOT" name="UDP_2_acetamido_2_deoxy_D_quinovoseundecaprenylphosphate_transferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UQUIVOT"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_udcpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uquivo_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> <speciesReference species="M_unquivo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1804"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URAt2pp" sboTerm="SBO:0000185" id="R_URAt2pp" name="uracil_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URAt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0745"/> <fbc:geneProductRef fbc:geneProduct="PP_4290"/> <fbc:geneProductRef fbc:geneProduct="PP_3992"/> <fbc:geneProductRef fbc:geneProduct="PP_4643"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URAtex" sboTerm="SBO:0000185" id="R_URAtex" name="uracil_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ura_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ura_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_URCN" sboTerm="SBO:0000176" id="R_URCN" name="urocanase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URCN"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URCN"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urcan_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4izp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5033"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UREA" sboTerm="SBO:0000176" id="R_UREA" name="urease" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UREA"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UREA"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105157"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2843"/> <fbc:geneProductRef fbc:geneProduct="PP_2844"/> <fbc:geneProductRef fbc:geneProduct="PP_2845"/> <fbc:geneProductRef fbc:geneProduct="PP_2842"/> <fbc:geneProductRef fbc:geneProduct="PP_2846"/> <fbc:geneProductRef fbc:geneProduct="PP_2848"/> <fbc:geneProductRef fbc:geneProduct="PP_2849"/> <fbc:geneProductRef fbc:geneProduct="PP_2847"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UREA2t2pp" sboTerm="SBO:0000185" id="R_UREA2t2pp" name="urea_reversible_transport_via_proton_symport__2_H_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UREA2t2pp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_urea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4302"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UREAabcpp" sboTerm="SBO:0000185" id="R_UREAabcpp" name="Urea_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UREAabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UREAabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4841"/> <fbc:geneProductRef fbc:geneProduct="PP_4842"/> <fbc:geneProductRef fbc:geneProduct="PP_4843"/> <fbc:geneProductRef fbc:geneProduct="PP_4844"/> <fbc:geneProductRef fbc:geneProduct="PP_4845"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UREAtex" sboTerm="SBO:0000185" id="R_UREAtex" name="Urea_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UREAtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UREAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_urea_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_urea_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_UREAtpp" sboTerm="SBO:0000185" id="R_UREAtpp" name="Urea_transport_via_facilitate_diffusion__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UREAtpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UREAtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_urea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1076"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URIDK2r" sboTerm="SBO:0000176" id="R_URIDK2r" name="uridylate_kinase__dUMP_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URIDK2r"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URIDK2r"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dump_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1593"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URIt2rpp" sboTerm="SBO:0000185" id="R_URIt2rpp" name="uridine_transport_in_via_proton_symport__reversible__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_URIt2rpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_URItex" sboTerm="SBO:0000185" id="R_URItex" name="uridine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URItex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URItex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_uri_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_uri_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_USHD1" sboTerm="SBO:0000176" id="R_USHD1" name="UDP_sugar_hydrolase_pseudomonas_specific_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_USHD1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u23dddcga_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_lipidX_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2902"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VACCtex" sboTerm="SBO:0000185" id="R_VACCtex" name="vacenic_acid__transport_via__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_VACCtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vacc_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1689"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALDHr" sboTerm="SBO:0000176" id="R_VALDHr" name="Valine_dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALDHr"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALDHr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4617"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALTRS" sboTerm="SBO:0000176" id="R_VALTRS" name="Valyl_tRNA_synthetase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALTRS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALTRS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaval_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_valtrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0977"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALabcpp" sboTerm="SBO:0000185" id="R_VALabcpp" name="L_valine_transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1137"/> <fbc:geneProductRef fbc:geneProduct="PP_1138"/> <fbc:geneProductRef fbc:geneProduct="PP_1139"/> <fbc:geneProductRef fbc:geneProduct="PP_1140"/> <fbc:geneProductRef fbc:geneProduct="PP_1141"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4863"/> <fbc:geneProductRef fbc:geneProduct="PP_4864"/> <fbc:geneProductRef fbc:geneProduct="PP_4866"/> <fbc:geneProductRef fbc:geneProduct="PP_4867"/> <fbc:geneProductRef fbc:geneProduct="PP_4865"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1137"/> <fbc:geneProductRef fbc:geneProduct="PP_1138"/> <fbc:geneProductRef fbc:geneProduct="PP_1139"/> <fbc:geneProductRef fbc:geneProduct="PP_1140"/> <fbc:geneProductRef fbc:geneProduct="PP_1141"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALt2rpp" sboTerm="SBO:0000185" id="R_VALt2rpp" name="L_valine_reversible_transport_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALt2rpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALtex" sboTerm="SBO:0000185" id="R_VALtex" name="L_valine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_val__L_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_val__L_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_VANKpp" sboTerm="SBO:0000185" id="R_VANKpp" name="Vanillateproton_symport_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VANKpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VANKpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vanlt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanlt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3740"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VANLNtex" sboTerm="SBO:0000185" id="R_VANLNtex" name="Vanillin_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VANLNtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VANLNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vanln_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_vanln_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3739"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VANLTtex" sboTerm="SBO:0000185" id="R_VANLTtex" name="Vanillate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VANLTtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VANLTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vanlt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_vanlt_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3739"/> <fbc:geneProductRef fbc:geneProduct="PP_1383"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VNLNpp" sboTerm="SBO:0000185" id="R_VNLNpp" name="Vanillinproton_symport_transport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VNLNpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VNLNpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vanln_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanln_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3740"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_XANt2pp" sboTerm="SBO:0000185" id="R_XANt2pp" name="xanthine_transport_in_via_proton_symport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_XANt2pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/XANt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_xan_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3992"/> <fbc:geneProductRef fbc:geneProduct="PP_0745"/> <fbc:geneProductRef fbc:geneProduct="PP_4290"/> <fbc:geneProductRef fbc:geneProduct="PP_4643"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_XANtex" sboTerm="SBO:0000185" id="R_XANtex" name="xanthine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_XANtex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/XANtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_xan_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_xan_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_XMO" sboTerm="SBO:0000176" id="R_XMO" name="toluene_monooxygenase__pWW0_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_XMO"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/XMO"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bzalc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="pWW0_129"/> <fbc:geneProductRef fbc:geneProduct="pWW0_130"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_XPPT" sboTerm="SBO:0000176" id="R_XPPT" name="xanthine_phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_XPPT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/XPPT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0747"/> <fbc:geneProductRef fbc:geneProduct="PP_5256"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ZN2t3pp" sboTerm="SBO:0000185" id="R_ZN2t3pp" name="zinc__Zn2__transport_out_via_proton_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ZN2t3pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ZN2t3pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ZN2t4pp" sboTerm="SBO:0000185" id="R_ZN2t4pp" name="zinc_transport_out_via_antiport__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ZN2t4pp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ZN2t4pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0026"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ZN2t5" sboTerm="SBO:0000185" id="R_ZN2t5" name="zinc__Zn2__transport_out_via_proton_antiport__cytosolexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ZN2t5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0043"/> <fbc:geneProductRef fbc:geneProduct="PP_0044"/> <fbc:geneProductRef fbc:geneProduct="PP_0045"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2410"/> <fbc:geneProductRef fbc:geneProduct="PP_2409"/> <fbc:geneProductRef fbc:geneProduct="PP_2408"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ZN2t6" sboTerm="SBO:0000185" id="R_ZN2t6" name="zinc__Zn2__transport_out_via_proton_antiport__periplasmexternal_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ZN2t6"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0043"/> <fbc:geneProductRef fbc:geneProduct="PP_0044"/> <fbc:geneProductRef fbc:geneProduct="PP_0045"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2410"/> <fbc:geneProductRef fbc:geneProduct="PP_2409"/> <fbc:geneProductRef fbc:geneProduct="PP_2408"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ZNabcpp" sboTerm="SBO:0000185" id="R_ZNabcpp" name="zinc__Zn2__transport_via_ABC_system__periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ZNabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ZNabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0120"/> <fbc:geneProductRef fbc:geneProduct="PP_0117"/> <fbc:geneProductRef fbc:geneProduct="PP_0118"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3801"/> <fbc:geneProductRef fbc:geneProduct="PP_3802"/> <fbc:geneProductRef fbc:geneProduct="PP_3803"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_Zn2tex" sboTerm="SBO:0000185" id="R_Zn2tex" name="zinc__Zn2__transport_via_diffusion__extracellular_to_periplasm_" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Zn2tex"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Zn2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_zn2_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_sink_PHAg" sboTerm="SBO:0000632" id="R_sink_PHAg" name="PHA_preexistent" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_sink_PHAg"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_sink_pqqA_kt_c_" sboTerm="SBO:0000632" id="R_sink_pqqA_kt_c_" name="sink_pqqA_kt" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB3N1"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_sink_pqqA_kt_c_"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pqqA_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CMS" sboTerm="SBO:0000176" id="R_CMS" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CMS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CMS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2me4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4c2me_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1614"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRAI" sboTerm="SBO:0000176" id="R_PRAI" name="Phosphoribosylanthranilate isomerase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRAI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRAI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pran_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2cpr5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1995"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERH" sboTerm="SBO:0000176" id="R_SERH" name="L-serine hydrolyase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SERH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SERH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3ig3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0082"/> <fbc:geneProductRef fbc:geneProduct="PP_0083"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NI2abcpp" sboTerm="SBO:0000185" id="R_NI2abcpp" name="Nickle (Ni+2) ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NI2abcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NI2abcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3345"/> <fbc:geneProductRef fbc:geneProduct="PP_3346"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PIabc" sboTerm="SBO:0000185" id="R_PIabc" name="Phosphate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PIabc"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PIabc"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2659"/> <fbc:geneProductRef fbc:geneProduct="PP_5326"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHAD_3mob_h" sboTerm="SBO:0000176" id="R_DHAD_3mob_h" name="Dihydroxy-acid dehydratase, 3-Methyl-2-oxobutanoate, " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHAD_3mob_h"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHAD_3mob_h"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_23dhmb_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5128"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMALRED" sboTerm="SBO:0000176" id="R_DMALRED" name="(S)-Malate:(acceptor) oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DMALRED"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMALRED"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0751"/> <fbc:geneProductRef fbc:geneProduct="PP_1251"/> <fbc:geneProductRef fbc:geneProduct="PP_2925"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRICIh" sboTerm="SBO:0000176" id="R_PRICIh" name="1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase, " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRICIh"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRICIh"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prfp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prlp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0292"/> <fbc:geneProductRef fbc:geneProduct="PP_0293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRACHh" sboTerm="SBO:0000176" id="R_PRACHh" name="Phosphoribosyl-AMP cyclohydrolase, " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRACHh"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRACHh"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prbamp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prfp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3320"/> <fbc:geneProductRef fbc:geneProduct="PP_5014"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRAISh" sboTerm="SBO:0000176" id="R_PRAISh" name="Phosphoribosylaminoimidazolesuccinocarboxamide synthase, " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRAISh"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRAISh"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aizc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25aics_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1240"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G5DHx" sboTerm="SBO:0000176" id="R_G5DHx" name="Glutamate-5-semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G5DHx"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G5DHx"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4811"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CTPS1" sboTerm="SBO:0000176" id="R_CTPS1" name="CTP synthase NH3 " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CTPS1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CTPS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1610"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEMEti" sboTerm="SBO:0000185" id="R_HEMEti" name="Heme transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HEMEti"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HEMEti"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4327"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HDH" sboTerm="SBO:0000176" id="R_HDH" name="Histidinol dehydrogenase, cytosol" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HDH"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HDH"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101877"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_histd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0966"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADD" sboTerm="SBO:0000176" id="R_ADD" name="Adenine deaminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADD"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hxan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0591"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APPAT" sboTerm="SBO:0000176" id="R_APPAT" name="pantetheine-4-phosphate adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APPAT"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APPAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pan4p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5123"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALTLh" sboTerm="SBO:0000176" id="R_VALTLh" name="Valine---tRNA ligase, " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALTLh"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALTLh"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaval_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_valtrna_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0977"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EAR121x" sboTerm="SBO:0000176" id="R_EAR121x" name="Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EAR121x"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR121x"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97849"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_t3c5ddeceACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cddec5eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4635"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOBDabc" sboTerm="SBO:0000185" id="R_MOBDabc" name="Molybdate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MOBDabc"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MOBDabc"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mobd_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mobd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3830"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGDI" sboTerm="SBO:0000176" id="R_ARGDI" name="Arginine deiminase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGDI"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGDI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_citr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IDPh" sboTerm="SBO:0000176" id="R_IDPh" name="Inorganic diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IDPh"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IDPh"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0538"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCS" sboTerm="SBO:0000176" id="R_MCS" name="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MCS"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MCS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2p4c2me_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mecdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1618"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPRGL" sboTerm="SBO:0000176" id="R_PPRGL" name="Phosphoribosylamine---glycine ligase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPRGL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPRGL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pram_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4823"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SULabc" sboTerm="SBO:0000185" id="R_SULabc" name="Sulfate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SULabc"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SULabc"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5137"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GCL" sboTerm="SBO:0000176" id="R_GCL" name="Glutamate---cysteine ligase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GCL"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GCL"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100075"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glucys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0243"/> <fbc:geneProductRef fbc:geneProduct="PP_3253"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDP8" sboTerm="SBO:0000176" id="R_NDP8" name="Nucleoside-diphosphatase (dUDP)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDP8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDP8"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101932"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dump_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5286"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HPTNCOAR" sboTerm="SBO:0000176" id="R_3HPTNCOAR" name="3R_3_Hydroxypentanoyl_CoA reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_3HPTNCOAR"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_3oxptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3PEPTabcpp" sboTerm="SBO:0000185" id="R_3PEPTabcpp" name="Tripeptide (LalaDgluMdap) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3PEPTabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3PEPTabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_LalaDgluMdap_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4147"/> <fbc:geneProductRef fbc:geneProduct="PP_4148"/> <fbc:geneProductRef fbc:geneProduct="PP_4149"/> <fbc:geneProductRef fbc:geneProduct="PP_4150"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPTNCOAK" sboTerm="SBO:0000176" id="R_4HPTNCOAK" name="4_Hydroxypentanoyl_CoA kinase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPTNCOAK"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4poptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2791"/> <fbc:geneProductRef fbc:geneProduct="PP_2792"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPTNCOAL" sboTerm="SBO:0000176" id="R_4HPTNCOAL" name="4_Hydroxypentanoate_CoA ligase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPTNCOAL"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4hptn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2795"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPTNtex" sboTerm="SBO:0000185" id="R_4HPTNtex" name="4_Hydroxypentanoate transport via diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPTNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hptn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hptn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4HPTNtpp" sboTerm="SBO:0000185" id="R_4HPTNtpp" name="4_Hydroxypentanoate transport via Na symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPTNtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_4hptn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4hptn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2796"/> <fbc:geneProductRef fbc:geneProduct="PP_2797"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OXPTCOADHx" sboTerm="SBO:0000176" id="R_4OXPTCOADHx" name="4_Oxopentanoyl_CoA 4_dehydrogenase (NAD)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4OXPTCOADHx"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OXPTCOADHy" sboTerm="SBO:0000176" id="R_4OXPTCOADHy" name="4_Oxopentanoyl_CoA 4_dehydrogenase (NADP)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4OXPTCOADHy"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OXPTNtex" sboTerm="SBO:0000185" id="R_4OXPTNtex" name="4_Oxopentanoate transport via diffusion" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4OXPTNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4oxptn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4OXPTNtpp" sboTerm="SBO:0000185" id="R_4OXPTNtpp" name="4_Oxopentanoate transport via Na symport" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4OXPTNtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_4oxptn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4oxptn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2796"/> <fbc:geneProductRef fbc:geneProduct="PP_2797"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4PEPTabcpp" sboTerm="SBO:0000185" id="R_4PEPTabcpp" name="Tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4PEPTabcpp"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4PEPTabcpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_LalaDgluMdapDala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdapDala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4147"/> <fbc:geneProductRef fbc:geneProduct="PP_4148"/> <fbc:geneProductRef fbc:geneProduct="PP_4149"/> <fbc:geneProductRef fbc:geneProduct="PP_4150"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4POPCOAM" sboTerm="SBO:0000176" id="R_4POPCOAM" name="4_(Phosphooxy pentanoyl_CoA mutase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4POPCOAM"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4poptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_3ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2793"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4POPCOAM2" sboTerm="SBO:0000176" id="R_4POPCOAM2" name="4_(Phosphooxy pentanoyl_CoA mutase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4POPCOAM2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3ptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2793"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4POPCOAM3" sboTerm="SBO:0000176" id="R_4POPCOAM3" name="4_(Phosphooxy pentanoyl_CoA mutase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4POPCOAM3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_2ptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2793"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACMTSOXINtex" sboTerm="SBO:0000176" id="R_ACMTSOXINtex" name="N_Acetylmethionine_sulfoximine transport periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACMTSOXINtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acmtsoxin_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acmtsoxin_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACMTSOXINtpp" sboTerm="SBO:0000185" id="R_ACMTSOXINtpp" name="N_Acetylmethionine_sulfoximine transport citoplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACMTSOXINtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acmtsoxin_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acmtsoxin_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACPHPHITRNtex" sboTerm="SBO:0000185" id="R_ACPHPHITRNtex" name="N_Acetylphosphinothricin transport periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACPHPHITRNtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acpptrn_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acpptrn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACPHPHITRNtpp" sboTerm="SBO:0000185" id="R_ACPHPHITRNtpp" name="N_Acetylphosphinothricin transport citoplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACPHPHITRNtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acpptrn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acpptrn_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ARGR" sboTerm="SBO:0000176" id="R_ARGR" name="arginine racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ARGR"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BVMO1" sboTerm="SBO:0000176" id="R_BVMO1" name="baeyer-villiger monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BVMO1"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_n2one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BVMO2" sboTerm="SBO:0000176" id="R_BVMO2" name="baeyer-villiger monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BVMO2"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_d2one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BVMO3" sboTerm="SBO:0000176" id="R_BVMO3" name="baeyer-villiger monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BVMO3"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_d3one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpppa_c" stoichiometry="0.5" constant="true"/> <speciesReference species="M_ethoc_c" stoichiometry="0.5" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BVMO4" sboTerm="SBO:0000176" id="R_BVMO4" name="baeyer-villiger monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BVMO4"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_d4one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxbut_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BVMO5" sboTerm="SBO:0000176" id="R_BVMO5" name="baeyer-villiger monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BVMO5"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_und2one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nnac_c" stoichiometry="0.78" constant="true"/> <speciesReference species="M_methdca_c" stoichiometry="0.22" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CURR" sboTerm="SBO:0000176" id="R_CURR" name="NADPH-dependent curcumin reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CURR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CURR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cur_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhcur_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2476"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_D2ONEtex" sboTerm="SBO:0000185" id="R_D2ONEtex" name="D2ONE transport via diffusion extracellular to periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D2ONEtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d2one_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d2one_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D2ONEtpp" sboTerm="SBO:0000185" id="R_D2ONEtpp" name="D2ONE transport via diffusion periplasm " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D2ONEtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d2one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d2one_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D3ONEtex" sboTerm="SBO:0000185" id="R_D3ONEtex" name="D3ONE transport via diffusion extracellular to periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D3ONEtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d3one_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d3one_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D3ONEtpp" sboTerm="SBO:0000185" id="R_D3ONEtpp" name="D3ONE transport via diffusion periplasm " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D3ONEtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d3one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d3one_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D4ONEtex" sboTerm="SBO:0000185" id="R_D4ONEtex" name="D4ONE transport via diffusion extracellular to periplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D4ONEtex"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d4one_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d4one_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D4ONEtpp" sboTerm="SBO:0000185" id="R_D4ONEtpp" name="D4ONE transport via diffusion periplasm " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D4ONEtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d4one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d4one_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DHCURR" sboTerm="SBO:0000176" id="R_DHCURR" name="NADPH-dependent dihydrocurcumin reductase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DHCURR"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHCURR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhcur_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thcur_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2476"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EX_4hptn_e" sboTerm="SBO:0000627" id="R_EX_4hptn_e" name="4_Hydroxypentanoate exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_4hptn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hptn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_4oxptn_e" sboTerm="SBO:0000627" id="R_EX_4oxptn_e" name="4_Oxopentanoate exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_4oxptn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_acmtsoxin_e" sboTerm="SBO:0000627" id="R_EX_acmtsoxin_e" name="N_Acetylmethionine_sulfoximine exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_acmtsoxin_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acmtsoxin_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_acpptrn_e" sboTerm="SBO:0000627" id="R_EX_acpptrn_e" name="N_Acetylphosphinothricin exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_acpptrn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acpptrn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_d2one_e" sboTerm="SBO:0000627" id="R_EX_d2one_e" name="2_Decanone exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_d2one_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d2one_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_d3one_e" sboTerm="SBO:0000627" id="R_EX_d3one_e" name="3_Decanone exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_d3one_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d3one_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_d4one_e" sboTerm="SBO:0000627" id="R_EX_d4one_e" name="4_Decanone exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_d4one_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d4one_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_mtsoxin_e" sboTerm="SBO:0000627" id="R_EX_mtsoxin_e" name="Methionine_sulfoximine exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_mtsoxin_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mtsoxin_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_n2one_e" sboTerm="SBO:0000627" id="R_EX_n2one_e" name="2_Nonanone exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_n2one_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_n2one_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_pptrn_e" sboTerm="SBO:0000627" id="R_EX_pptrn_e" name="L_Phosphinothricin exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pptrn_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pptrn_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_und2one_e" sboTerm="SBO:0000627" id="R_EX_und2one_e" name="2_Undecanone exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_und2one_e"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_und2one_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_GLUTARH" sboTerm="SBO:0000176" id="R_GLUTARH" name="glutarate hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLUTARH"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glutar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> <speciesReference species="M_S2hglut_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2909"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT33" sboTerm="SBO:0000176" id="R_KAT33" name="3_Oxopentanoyl_CoA thiolase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_KAT33"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_3oxptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2137"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEVUACOAL" sboTerm="SBO:0000176" id="R_LEVUACOAL" 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<listOfProducts> <speciesReference species="M_mtsoxin_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MTSOXINtpp" sboTerm="SBO:0000185" id="R_MTSOXINtpp" name="Methionine_sulfoximine transport citoplasm" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MTSOXINtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mtsoxin_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mtsoxin_c" stoichiometry="1" constant="true"/> 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id="R_N2ONEtpp" name="N2ONE transport via diffusion periplasm " reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_N2ONEtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_n2one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_n2one_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PHER" sboTerm="SBO:0000176" id="R_PHER" name="phenylalanine racemase" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" 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xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPTRNACT"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptrn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_acpptrn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1924"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPTRNtex" sboTerm="SBO:0000185" 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xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_REPHACCOAT"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rephaccoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rephac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3285"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UND2ONEtex" sboTerm="SBO:0000185" id="R_UND2ONEtex" 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fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UND2ONEtpp"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_und2one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_und2one_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_13DAMPPtex_REV" sboTerm="SBO:0000185" id="R_13DAMPPtex_REV" name="1_3_Diaminopropane_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" 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<listOfProducts> <speciesReference species="M_34dhcinm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_34DHCINMtpp_REV" sboTerm="SBO:0000185" id="R_34DHCINMtpp_REV" name="DHCINM_transport_via_diffusion___periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_34DHCINMtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/34DHCINMtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhcinm_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhcinm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_34DHPHEtex_REV" sboTerm="SBO:0000185" id="R_34DHPHEtex_REV" name="3_4_Dihydroxy_L_phenylalanine_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_34DHPHEtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhphe_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhphe_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3HAACOAT100_REV" sboTerm="SBO:0000176" id="R_3HAACOAT100_REV" name="3_Hydroxyacyl_ACPCoA_Transacylase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT100_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT100"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference 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xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT121_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT121"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hcddec5eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction 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</rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hcmrs7eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT60_REV" sboTerm="SBO:0000176" id="R_3HAACOAT60_REV" name="3_Hydroxyacyl_ACPCoA_Transacylase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3HAACOAT60_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAACOAT60"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1408"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HAACOAT80_REV" sboTerm="SBO:0000176" id="R_3HAACOAT80_REV" name="3_Hydroxyacyl_ACPCoA_Transacylase (reversible)" reversible="false" fast="false" 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</rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oxoadp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1378"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3PQQS_REV" sboTerm="SBO:0000176" id="R_3PQQS_REV" name="Pyrroloquinolone_quinone_biosynthesis__3pqq_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_3PQQS_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3pqq_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4pqq_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_3_4DHBZ1t_pp__REV" sboTerm="SBO:0000185" id="R_3_4DHBZ1t_pp__REV" name="3_4_dihidroxy_benzoate_reversible_trasporter_via_proton_symport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_3_4DHBZ1t_pp__REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3_4DHBZt2_REV" sboTerm="SBO:0000185" id="R_3_4DHBZt2_REV" name="Protocatechuate_outher_membrane_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_3_4DHBZt2_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3_4DHBZt2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_34dhbz_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1382"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HBADH_REV" sboTerm="SBO:0000176" id="R_4HBADH_REV" name="4_hydroxy_benzyl_alcohol_dehydrogenase (reversible)" 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<reaction metaid="R_4HBZtex_REV" sboTerm="SBO:0000185" id="R_4HBZtex_REV" name="4_Hydroxybenzoate_transport__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_4HBZtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4HBZtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hbz_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbz_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1383"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPRODCtex_REV" sboTerm="SBO:0000185" id="R_4HPRODCtex_REV" name="cis_4_hydroxy_L_proline_transport__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPRODCtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_DC_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hpro_DC_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4HPROE_REV" sboTerm="SBO:0000176" id="R_4HPROE_REV" name="4_hydroxyproline_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPROE_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_DC_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hpro_LT_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1258"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPROLTtex_REV" sboTerm="SBO:0000185" id="R_4HPROLTtex_REV" name="trans_4_hydroxy_L_proline_transport__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPROLTtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hpro_LT_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hpro_LT_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_5APTNtex_REV" sboTerm="SBO:0000185" id="R_5APTNtex_REV" name="D_amino_valeric_acid_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_5APTNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aptn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_5OXPROtex_REV" sboTerm="SBO:0000185" id="R_5OXPROtex_REV" name="L_oxoproline_transport_via_diffusion__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_5OXPROtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5oxpro_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5oxpro_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_6HNACt1pp_REV" sboTerm="SBO:0000185" id="R_6HNACt1pp_REV" name="6_Hydroxy_Nicotinic_acid_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_6HNACt1pp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6hnac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> 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constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3939"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AADSACYCL_REV" sboTerm="SBO:0000176" id="R_AADSACYCL_REV" name="2_Aminoadipate_6_semialdehyde (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AADSACYCL_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AADSACYCL"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95152"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_L2aadp6sa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thp2c_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AATA_REV" sboTerm="SBO:0000176" id="R_AATA_REV" name="2_aminoadipate_transaminase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AATA_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AATA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_L2aadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2oxoadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ABUTtex_REV" sboTerm="SBO:0000185" id="R_ABUTtex_REV" name="4_aminobutyrate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ABUTtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ABUTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4abut_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACACt2pp_REV" sboTerm="SBO:0000185" id="R_ACACt2pp_REV" name="acetoacetate_transport_via_proton_symport___periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACACt2pp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACACt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3124"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACtex_REV" sboTerm="SBO:0000185" id="R_ACACtex_REV" name="acetoacetate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACACtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACALD_REV" sboTerm="SBO:0000176" id="R_ACALD_REV" name="acetaldehyde_dehydrogenase__acetylating_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACALD_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACALD"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95211"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_093"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACALDtex_REV" sboTerm="SBO:0000185" id="R_ACALDtex_REV" name="acetaldehyde_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACALDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACALDtpp_REV" sboTerm="SBO:0000185" id="R_ACALDtpp_REV" name="acetaldehyde_reversible_transport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACALDtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACALDtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACONIs_REV" sboTerm="SBO:0000176" id="R_ACONIs_REV" name="aconitate_isomerase__spontaneous_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACONIs_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACONIs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_T_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACOTA_REV" sboTerm="SBO:0000176" id="R_ACOTA_REV" name="acetylornithine_transaminase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACOTA_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACOTA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acorn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4481"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSERtex_REV" sboTerm="SBO:0000185" id="R_ACSERtex_REV" name="O_Acetyl_L_serine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACSERtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACSERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acser_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACTNtex_REV" sboTerm="SBO:0000185" id="R_ACTNtex_REV" name="acetoin_transpor__external_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACTNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_actn__R_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actn__R_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACt2rpp_REV" sboTerm="SBO:0000185" id="R_ACt2rpp_REV" name="acetate_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACtex_REV" sboTerm="SBO:0000185" id="R_ACtex_REV" name="Acetate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ACtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ADEt2rpp_REV" sboTerm="SBO:0000185" id="R_ADEt2rpp_REV" name="adenine_transport_via_proton_symport__reversible___periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADEt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADEt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4653"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADEtex_REV" sboTerm="SBO:0000185" id="R_ADEtex_REV" name="adenine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADEtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ade_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ADK1_REV" sboTerm="SBO:0000176" id="R_ADK1_REV" name="adenylate_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADK1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADK3_REV" sboTerm="SBO:0000176" id="R_ADK3_REV" name="adentylate_kinase__GTP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADK3_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADK3"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97077"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADK4_REV" sboTerm="SBO:0000176" id="R_ADK4_REV" name="adentylate_kinase__ITP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADK4_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADK4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_idp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADNtex_REV" sboTerm="SBO:0000185" id="R_ADNtex_REV" name="adenosine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ADNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ADNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AEPTA_REV" sboTerm="SBO:0000176" id="R_AEPTA_REV" name="2_aminoethylphosphonate_pyruvate_transaminase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AEPTA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pald_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ameph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2209"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AEPtpp_REV" sboTerm="SBO:0000185" id="R_AEPtpp_REV" name="2_aminoethylphosphonate_outer_membrane_transporter__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AEPtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ameph_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ameph_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AGMtex_REV" sboTerm="SBO:0000185" id="R_AGMtex_REV" name="agmatine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGMtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_agm_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_agm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AGPR_REV" sboTerm="SBO:0000176" id="R_AGPR_REV" name="N_acetyl_g_glutamyl_phosphate_reductase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AGPR_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGPR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acg5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3633"/> <fbc:geneProductRef fbc:geneProduct="PP_0432"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGtex_REV" sboTerm="SBO:0000185" id="R_AGtex_REV" name="copper__Ag__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_AGtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ag_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ag_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AICART_REV" sboTerm="SBO:0000176" id="R_AICART_REV" name="phosphoribosylaminoimidazolecarboxamide_formyltransferase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AICART_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AICART"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115676"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fprica_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_aicar_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4822"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGt2rpp_REV" sboTerm="SBO:0000185" id="R_AKGt2rpp_REV" name="2_oxoglutarate_reversible_transport_via_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AKGt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1400"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGtex_REV" sboTerm="SBO:0000185" id="R_AKGtex_REV" name="alpha_ketoglutarate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AKGtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ALAALAr_REV" sboTerm="SBO:0000176" id="R_ALAALAr_REV" name="D_alanine_D_alanine_ligase__reversible_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAALAr_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAALAr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_c" stoichiometry="2" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4346"/> <fbc:geneProductRef fbc:geneProduct="PP_1339"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAR_REV" sboTerm="SBO:0000176" id="R_ALAR_REV" name="alanine_racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAR_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5269"/> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAtex_REV" sboTerm="SBO:0000185" id="R_ALAtex_REV" name="L_alanine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ALGE1_REV" sboTerm="SBO:0000176" id="R_ALGE1_REV" name="Alginate_C5_mannuronate_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE1_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_41_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE2_REV" sboTerm="SBO:0000176" id="R_ALGE2_REV" name="Alginate_C5_mannuronate_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE2_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_32_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE3_REV" sboTerm="SBO:0000176" id="R_ALGE3_REV" name="Alginate_C5_mannuronate_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE3_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_23_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE4_REV" sboTerm="SBO:0000176" id="R_ALGE4_REV" name="Alginate_C5_mannuronate_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE4_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealg_MG_14_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE5_REV" sboTerm="SBO:0000176" id="R_ALGE5_REV" name="Alginate_C5_mannuronate_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE5_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prealginate__G_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealginate__M_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE6_REV" sboTerm="SBO:0000176" id="R_ALGE6_REV" name="Alginate_C5_mannuronate_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE6_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_41_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealgac_M4_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALGE7_REV" sboTerm="SBO:0000176" id="R_ALGE7_REV" name="Alginate_C5_mannuronate_epimerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALGE7_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_algac_MG_32_p" stoichiometry="1" 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<listOfReactants> <speciesReference species="M_algac_MG_14_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prealgac_M1_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTNRA_REV" sboTerm="SBO:0000176" id="R_ALLTNRA_REV" name="allantoin_racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ALLTNRA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alltn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alltn__R_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4310"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTNt2rpp_REV" sboTerm="SBO:0000185" id="R_ALLTNt2rpp_REV" name="allantoin_transport_in_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALLTNt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALLTNt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alltn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alltn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4309"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTNtex_REV" sboTerm="SBO:0000185" id="R_ALLTNtex_REV" name="allantoin_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ALLTNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALLTNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alltn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alltn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_AOXHEXCYCL_REV" sboTerm="SBO:0000627" id="R_AOXHEXCYCL_REV" name="6_Amino_2_oxohexanoate_cyclation (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_AOXHEXCYCL_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AOXHEXCYCL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_1pipdn2c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APCtex_REV" sboTerm="SBO:0000185" id="R_APCtex_REV" name="Ampicilin_transport__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_APCtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_APPLDHr_REV" sboTerm="SBO:0000176" id="R_APPLDHr_REV" name="aminopropanol_dehydrogenase_reversible (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APPLDHr_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APPLDHr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_APTNAT_REV" sboTerm="SBO:0000176" id="R_APTNAT_REV" name="5_aminopentanoate2_oxoglutarate_aminotransferase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_APTNAT_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/APTNAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxptn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGORNt7pp_REV" sboTerm="SBO:0000185" id="R_ARGORNt7pp_REV" name="arginineornithine_antiporter__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGORNt7pp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGORNt7pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1002"/> <fbc:geneProductRef fbc:geneProduct="PP_1003"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGSL_REV" sboTerm="SBO:0000176" id="R_ARGSL_REV" name="argininosuccinate_lyase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ARGSL_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGSL"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_argsuc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASNtex_REV" sboTerm="SBO:0000185" id="R_ASNtex_REV" name="L_asparagine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asn__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ASO3tex_REV" sboTerm="SBO:0000185" id="R_ASO3tex_REV" name="arsenite_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASO3tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASO3tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_aso3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ASO4tex_REV" sboTerm="SBO:0000185" id="R_ASO4tex_REV" name="Arsenate_transporter__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" 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<annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASPK_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4pasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4473"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPtex_REV" sboTerm="SBO:0000185" id="R_ASPtex_REV" name="L_aspartate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ASPtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ATPS4rpp_REV" sboTerm="SBO:0000185" id="R_ATPS4rpp_REV" name="ATP_synthase__four_protons_for_one_ATP___periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ATPS4rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPS4rpp"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96137"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="4" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5417"/> <fbc:geneProductRef fbc:geneProduct="PP_5418"/> <fbc:geneProductRef fbc:geneProduct="PP_5419"/> <fbc:geneProductRef fbc:geneProduct="PP_5412"/> <fbc:geneProductRef fbc:geneProduct="PP_5413"/> <fbc:geneProductRef fbc:geneProduct="PP_5414"/> <fbc:geneProductRef fbc:geneProduct="PP_5415"/> <fbc:geneProductRef fbc:geneProduct="PP_5416"/> <fbc:geneProductRef fbc:geneProduct="PP_5420"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAtex_REV" sboTerm="SBO:0000185" id="R_BALAtex_REV" name="beta_alanine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BALAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BALAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ala_B_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BILIVERDtex_REV" sboTerm="SBO:0000185" id="R_BILIVERDtex_REV" name="biliverdin_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BILIVERDtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_biliverd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_biliverd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BILIVERDtpp_REV" sboTerm="SBO:0000185" id="R_BILIVERDtpp_REV" name="biliverdin_transport_via_diffusion__periplasm_to_cytoplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BILIVERDtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_biliverd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_biliverd_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BTDDtex_REV" sboTerm="SBO:0000185" id="R_BTDDtex_REV" name="butanediol_transporter__external (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BTDDtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btd_RR_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btd_RR_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BTDDtpp_REV" sboTerm="SBO:0000185" id="R_BTDDtpp_REV" name="butanediol__pasive_diffusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_BTDDtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btd_RR_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btd_RR_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BTNtex_REV" sboTerm="SBO:0000185" id="R_BTNtex_REV" name="Biotin_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BTNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BTNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_btn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_BZt1pp_REV" sboTerm="SBO:0000185" id="R_BZt1pp_REV" name="Benzoate_proton_symport_periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BZt1pp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BZt1pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bz_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3165"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BZtex_REV" sboTerm="SBO:0000185" id="R_BZtex_REV" name="Benzoate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_BZtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BZtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_bz_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bz_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3168"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CA2tex_REV" sboTerm="SBO:0000185" id="R_CA2tex_REV" name="calcium__Ca2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CA2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CA2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ca2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ca2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CATECHOLtex_REV" sboTerm="SBO:0000185" id="R_CATECHOLtex_REV" name="catechol_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CATECHOLtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CATECHOLtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_catechol_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_catechol_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CATECHOLtpp_REV" sboTerm="SBO:0000185" id="R_CATECHOLtpp_REV" name="catechol_transport_via_diffusion___periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CATECHOLtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CATECHOLtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_catechol_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CAt6pp_REV" sboTerm="SBO:0000185" id="R_CAt6pp_REV" name="calcium__sodium_antiporter__11_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CAt6pp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CAt6pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ca2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ca2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0928"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBMKr_REV" sboTerm="SBO:0000176" id="R_CBMKr_REV" name="Carbamate_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CBMKr_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBMKr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0999"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CD2tex_REV" sboTerm="SBO:0000185" id="R_CD2tex_REV" name="cadmium__Cd2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CD2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CD2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cd2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cd2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CHLtex_REV" sboTerm="SBO:0000185" id="R_CHLtex_REV" name="choline_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CHLtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHLtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_chol_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CHOLS_ex__REV" sboTerm="SBO:0000185" id="R_CHOLS_ex__REV" name="Choline_sulfate_transport_difusion (reversible)" reversible="false" 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id="R_CRTNtex_REV" name="Creatinine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CRTNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_crtn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_crtn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CRTNtpp_REV" sboTerm="SBO:0000185" id="R_CRTNtpp_REV" 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</listOfProducts> </reaction> <reaction metaid="R_CTI1_REV" sboTerm="SBO:0000176" id="R_CTI1_REV" name="cis_trans_enoyl_CoA_isomerase__cis_tetradec_2_enoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_CTI1_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tde_2Z_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CU2tex_REV" sboTerm="SBO:0000185" id="R_CU2tex_REV" name="copper__Cu2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CU2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CU2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CUtex_REV" sboTerm="SBO:0000185" id="R_CUtex_REV" name="copper__Cu1__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CUtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CUtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96954"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cu_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cu_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYANtex_REV" sboTerm="SBO:0000185" id="R_CYANtex_REV" name="Cyanide_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYANtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYANtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cyan_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYSDtex_REV" sboTerm="SBO:0000185" id="R_CYSDtex_REV" name="D_cysteine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYSDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYStex_REV" sboTerm="SBO:0000185" id="R_CYStex_REV" name="L_cysteine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYStex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYStex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cys__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_CYTK1_REV" sboTerm="SBO:0000176" id="R_CYTK1_REV" name="cytidylate_kinase__CMP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYTK1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYTK1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97048"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1771"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTK2_REV" sboTerm="SBO:0000176" id="R_CYTK2_REV" name="cytidylate_kinase__dCMP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_CYTK2_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYTK2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97054"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1771"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DADK_REV" sboTerm="SBO:0000176" id="R_DADK_REV" name="deoxyadenylate_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF 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<speciesReference species="M_ala__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAPtex_REV" sboTerm="SBO:0000185" id="R_DAPtex_REV" name="1_5_Diaminopentane_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DAPtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DAPtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_15dap_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_15dap_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DARGtex_REV" sboTerm="SBO:0000185" id="R_DARGtex_REV" name="D_arginine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DARGtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference 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<speciesReference species="M_cbasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhor__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1086"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLASNR_REV" sboTerm="SBO:0000176" id="R_DLASNR_REV" name="Asparagine_racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLASNR_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_asn__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asn__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLCYSR_REV" sboTerm="SBO:0000176" id="R_DLCYSR_REV" name="Cysteine_racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> 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xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLEUtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_leu__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_leu__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DLMETR_REV" sboTerm="SBO:0000176" id="R_DLMETR_REV" name="Methionine_racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DLMETR_REV"> 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name="C121d6PHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C141aPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C141aPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C141d5PHA_REV" sboTerm="SBO:0000628" id="R_DM_C141d5PHA_REV" name="C141d5PHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C141d5PHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C141d5PHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C142PHA_REV" sboTerm="SBO:0000628" id="R_DM_C142PHA_REV" name="C142PHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C142PHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C142PHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C40aPHA_REV" sboTerm="SBO:0000628" id="R_DM_C40aPHA_REV" name="C40aPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C40aPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C40aPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C40atPHA_REV" sboTerm="SBO:0000628" id="R_DM_C40atPHA_REV" name="C40atPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C40atPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C40atPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C40pPHA_REV" sboTerm="SBO:0000628" id="R_DM_C40pPHA_REV" name="C40pPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C40pPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C40pPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C50aPHA_REV" sboTerm="SBO:0000628" id="R_DM_C50aPHA_REV" name="C50aPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C50aPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C50aPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C50pPHA_REV" sboTerm="SBO:0000628" id="R_DM_C50pPHA_REV" name="C50pPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C50pPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C50pPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C60aPHA_REV" sboTerm="SBO:0000628" id="R_DM_C60aPHA_REV" name="C60aPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C60aPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C60aPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C60atPHA_REV" sboTerm="SBO:0000628" id="R_DM_C60atPHA_REV" name="C60atPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C60atPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C60atPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C60pPHA_REV" sboTerm="SBO:0000628" id="R_DM_C60pPHA_REV" name="C60pPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C60pPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C60pPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C70aPHA_REV" sboTerm="SBO:0000628" id="R_DM_C70aPHA_REV" name="C70aPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C70aPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C70aPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C70pPHA_REV" sboTerm="SBO:0000628" id="R_DM_C70pPHA_REV" name="C70pPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C70pPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C70pPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C80aPHA_REV" sboTerm="SBO:0000628" id="R_DM_C80aPHA_REV" name="C80aPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C80aPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C80aPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C80pPHA_REV" sboTerm="SBO:0000628" id="R_DM_C80pPHA_REV" name="C80pPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C80pPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C80pPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C90aPHA_REV" sboTerm="SBO:0000628" id="R_DM_C90aPHA_REV" name="C90aPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C90aPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C90aPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_C90pPHA_REV" sboTerm="SBO:0000628" id="R_DM_C90pPHA_REV" name="C90pPHA_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_C90pPHA_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_C90pPHA_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM__acmum6p_REV" sboTerm="SBO:0000628" id="R_DM__acmum6p_REV" name="DM__acmum6p_c_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM__acmum6p_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acmum6p_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM__ppi50_REV" sboTerm="SBO:0000628" id="R_DM__ppi50_REV" name="DM__ppi50 (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM__ppi50_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ppi50_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_acgam_REV" sboTerm="SBO:0000628" id="R_DM_acgam_REV" name="DM__acgam (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_acgam_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_doxopa_REV" sboTerm="SBO:0000628" id="R_DM_doxopa_REV" name="DM_doxopa (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_doxopa_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_doxopa_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DM_tripeptide_c__REV" sboTerm="SBO:0000628" id="R_DM_tripeptide_c__REV" name="tripeptide_demand (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DM_tripeptide_c__REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tripeptide_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DOPAtex_REV" sboTerm="SBO:0000185" id="R_DOPAtex_REV" name="dopamine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DOPAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DOPAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dopa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dopa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DOPAtpp_REV" sboTerm="SBO:0000185" id="R_DOPAtpp_REV" name="DOPA_transport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DOPAtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dopa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dopa_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DORNtex_REV" sboTerm="SBO:0000185" id="R_DORNtex_REV" name="D_ornithine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DORNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orn__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orn__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DPHEt2rpp_REV" sboTerm="SBO:0000185" id="R_DPHEt2rpp_REV" name="D_phenylalanine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DPHEt2rpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DPHEtex_REV" sboTerm="SBO:0000185" id="R_DPHEtex_REV" name="D_phenylalanine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DPHEtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phe__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phe__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DPROtex_REV" sboTerm="SBO:0000185" id="R_DPROtex_REV" name="D_proline_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DPROtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pro__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pro__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DSERtex_REV" sboTerm="SBO:0000185" id="R_DSERtex_REV" name="D_serine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DSERtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ser__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ser__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DTMPK_REV" sboTerm="SBO:0000176" id="R_DTMPK_REV" name="dTMP_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_DTMPK_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DTMPK"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtmp_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DTYRt2rpp_REV" sboTerm="SBO:0000185" id="R_DTYRt2rpp_REV" name="D_tyrosine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DTYRt2rpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__D_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DTYRtex_REV" sboTerm="SBO:0000185" id="R_DTYRtex_REV" name="D_tyrosine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DTYRtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tyr__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tyr__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DVALtex_REV" sboTerm="SBO:0000185" id="R_DVALtex_REV" name="D_valine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_DVALtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_val__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_val__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D_LACt2pp_REV" sboTerm="SBO:0000185" id="R_D_LACt2pp_REV" name="D_lactate_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_D_LACt2pp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/D_LACt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__D_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_D_LACtex_REV" sboTerm="SBO:0000185" id="R_D_LACtex_REV" name="D_lactate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_D_LACtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/D_LACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lac__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lac__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ECOAE_REV" sboTerm="SBO:0000176" id="R_ECOAE_REV" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxybutanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ECOAE_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECTOtex_REV" sboTerm="SBO:0000185" id="R_ECTOtex_REV" name="L_ectoine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ECTOtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ecto__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ecto__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ENO_REV" sboTerm="SBO:0000176" id="R_ENO_REV" name="enolase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ENO_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ENO"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102626"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2pg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1612"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHAtex_REV" sboTerm="SBO:0000185" id="R_ETHAtex_REV" name="ethanolamine_transport_via_diffusion__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ETHAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETHAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etha_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etha_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ETOHtex_REV" sboTerm="SBO:0000185" id="R_ETOHtex_REV" name="ethanol_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ETOHtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETOHtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etoh_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ETOHtrpp_REV" sboTerm="SBO:0000185" id="R_ETOHtrpp_REV" name="ethanol_reversible_transport_via_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ETOHtrpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETOHtrpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EX_12dgr160_e_REV" sboTerm="SBO:0000627" id="R_EX_12dgr160_e_REV" name="1_2_Diacyl_sn_glycerol__dihexadecanoyl__n_C160__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_12dgr160_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_12dgr160_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_12dgr180_e_REV" sboTerm="SBO:0000627" id="R_EX_12dgr180_e_REV" name="1_2_Diacyl_sn_glycerol__dioctadecanoyl__n_C180__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_12dgr180_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_12dgr180_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_13dampp_e_REV" sboTerm="SBO:0000627" id="R_EX_13dampp_e_REV" name="1_3_Diaminopropane_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_13dampp_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_13dampp_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_13dampp_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_15dap_e_REV" sboTerm="SBO:0000627" id="R_EX_15dap_e_REV" name="1_5_Diaminopentane_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_15dap_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_15dap_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97995"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_15dap_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_1ag160_e_REV" sboTerm="SBO:0000627" id="R_EX_1ag160_e_REV" name="1_Acyl_sn_glycerol__hexadecanoate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag160_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_1ag160_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_1ag180_e_REV" sboTerm="SBO:0000627" id="R_EX_1ag180_e_REV" name="1_Acyl_sn_glycerol__octadecanoate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag180_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_1ag180_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_1ag181d9_e_REV" sboTerm="SBO:0000627" id="R_EX_1ag181d9_e_REV" name="1_Acyl_sn_glycerol__nC181d9__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag181d9_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_1ag181d9_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_1ag182d9d12_e_REV" sboTerm="SBO:0000627" id="R_EX_1ag182d9d12_e_REV" name="1_Acyl_sn_glycerol__nC182d9d12__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_1ag182d9d12_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_1ag182d9d12_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_25dkglcn_e_REV" sboTerm="SBO:0000627" id="R_EX_25dkglcn_e_REV" name="2_5_diketo_D_gluconate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_25dkglcn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_25dkglcn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_26dap__M_e_REV" sboTerm="SBO:0000627" id="R_EX_26dap__M_e_REV" name="meso_2_6_Diaminoheptanedioate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_26dap__M_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_26dap__M_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98010"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_26dap__M_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_AEP_e_REV" sboTerm="SBO:0000627" id="R_EX_AEP_e_REV" name="_2_Aminoethyl_phosphonate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_AEP_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_AEP_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98099"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_2ameph_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_2ddglcn_e_REV" sboTerm="SBO:0000627" id="R_EX_2ddglcn_e_REV" name="2_Dehydro_3_deoxy_D_gluconate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_2ddglcn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_2ddglcn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98011"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_2ddglcn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_2dhglcn_e_REV" sboTerm="SBO:0000627" id="R_EX_2dhglcn_e_REV" name="2_Dehydro_D_gluconate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_2dhglcn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_2dhglcn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98012"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_2dhglcn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_2m35mdntha_e_REV" sboTerm="SBO:0000627" id="R_EX_2m35mdntha_e_REV" name="N__2_methyl_3_5_dinitrophenyl__4_methyl_3_5_dinitroaniline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_2m35mdntha_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_34dhbz_e_REV" sboTerm="SBO:0000627" id="R_EX_34dhbz_e_REV" name="3_4_Dihydroxybenzoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_34dhbz_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_34dhbz_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98024"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_34dhbz_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_34dhcinm_e_REV" sboTerm="SBO:0000627" id="R_EX_34dhcinm_e_REV" name="3_4_Dihydroxy_trans_cinnamate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_34dhcinm_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_34dhcinm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98025"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_34dhcinm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_34dhphe_e_REV" sboTerm="SBO:0000627" id="R_EX_34dhphe_e_REV" name="3_4_Dihydroxy_L_phenylalanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_34dhphe_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_34dhphe_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98028"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_34dhphe_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_35dnta_e_REV" sboTerm="SBO:0000627" id="R_EX_35dnta_e_REV" name="N_N_bis_3_5_dinitrotolyl__amine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_35dnta_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_35dnta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_3h4atb_e_REV" sboTerm="SBO:0000627" id="R_EX_3h4atb_e_REV" name="3_Hydroxy_4_acetylthiobutanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_3h4atb_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_3h4atb_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_3mb_e_REV" sboTerm="SBO:0000627" id="R_EX_3mb_e_REV" name="3_Methylbutanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_3mb_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_3mb_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98047"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_3mb_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_3oxoadp_e_REV" sboTerm="SBO:0000627" id="R_EX_3oxoadp_e_REV" name="3_Oxoadipate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_3oxoadp_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_3oxoadp_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98054"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_3oxoadp_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_4abut_e_REV" sboTerm="SBO:0000627" id="R_EX_4abut_e_REV" name="4_Aminobutanoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_4abut_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4abut_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98058"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_4hbz_e_REV" sboTerm="SBO:0000627" id="R_EX_4hbz_e_REV" name="4_Hydroxybenzoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_4hbz_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4hbz_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98062"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_4hbz_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_4hpro_DC_e_REV" sboTerm="SBO:0000627" id="R_EX_4hpro_DC_e_REV" name="cis_4_Hydroxy_D_proline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_4hpro_DC_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_4hpro_DC_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_4hpro_LT_e_REV" sboTerm="SBO:0000627" id="R_EX_4hpro_LT_e_REV" name="trans_4_Hydroxy_L_proline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_4hpro_LT_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4hpro_LT_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98066"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_4hpro_LT_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_5aptn_e_REV" sboTerm="SBO:0000627" id="R_EX_5aptn_e_REV" name="5_Aminopentanoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_5aptn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_5aptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_5mcsn_e_REV" sboTerm="SBO:0000627" id="R_EX_5mcsn_e_REV" name="5_Methylcytosine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_5mcsn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_5mcsn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_5oxpro_e_REV" sboTerm="SBO:0000627" id="R_EX_5oxpro_e_REV" name="5_Oxoproline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_5oxpro_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_5oxpro_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98087"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_5oxpro_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_6atha_e_REV" sboTerm="SBO:0000627" id="R_EX_6atha_e_REV" name="6_acetylthiohexanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_6atha_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_6atha_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_6hnac_e_REV" sboTerm="SBO:0000627" id="R_EX_6hnac_e_REV" name="6_Hydroxynicotinate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_6hnac_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_6hnac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_met__D_e_REV" sboTerm="SBO:0000627" id="R_EX_met__D_e_REV" name="D_methionine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_met__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_met__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98752"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_met__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_LalaLglu_e_REV" sboTerm="SBO:0000627" id="R_EX_LalaLglu_e_REV" name="L_alanine_L_glutamate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_LalaLglu_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_LalaLglu_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98183"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_Ncbmpts_e_REV" sboTerm="SBO:0000627" id="R_EX_Ncbmpts_e_REV" name="N_Carbamoylputrescine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_Ncbmpts_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_Ncbmpts_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_R3hdec4e_e_REV" sboTerm="SBO:0000627" id="R_EX_R3hdec4e_e_REV" name="_R__3_Hydroxy_4Z_decenic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_R3hdec4e_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_R3hdec4e_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_R_3h4atba_e_REV" sboTerm="SBO:0000627" id="R_EX_R_3h4atba_e_REV" name="_R__3_Hydroxy_4_acetylthiobutanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_R_3h4atba_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_R_3h4atba_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_R_3h6atha_e_REV" sboTerm="SBO:0000627" id="R_EX_R_3h6atha_e_REV" name="_R__3_Hydroxy_6acetylthiohexanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_R_3h6atha_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_R_3h6atha_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_R_3hcmrs7e_e_REV" sboTerm="SBO:0000627" id="R_EX_R_3hcmrs7e_e_REV" name="_R__3_hydroxy_cis_myristol_7_en_exchange 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xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_R_3hdcaa_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_R_3hdcaa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_R_3hdd5ea_e_REV" sboTerm="SBO:0000627" id="R_EX_R_3hdd5ea_e_REV" name="_R__3_Hydroxydodecanoic_5_en_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" 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xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_R_3httdca_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_R_3httdca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_T4hcinnm_e_REV" sboTerm="SBO:0000627" id="R_EX_T4hcinnm_e_REV" name="trans_4_Hydroxycinnamate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_T4hcinnm_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_T4hcinnm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98191"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_T4hcinnm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ac_e_REV" sboTerm="SBO:0000627" id="R_EX_ac_e_REV" name="Acetate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98196"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_acac_e_REV" sboTerm="SBO:0000627" id="R_EX_acac_e_REV" name="Acetoacetate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98197"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_acald_e_REV" sboTerm="SBO:0000627" id="R_EX_acald_e_REV" name="Acetaldehyde_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acald_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acald_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98198"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_acon_C_e_REV" sboTerm="SBO:0000627" id="R_EX_acon_C_e_REV" name="cis_Aconitate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acon_C_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acon_C_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98224"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_acser_e_REV" sboTerm="SBO:0000627" id="R_EX_acser_e_REV" name="O_Acetyl_L_serine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_acser_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acser_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98225"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acser_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_actn__R_e_REV" sboTerm="SBO:0000627" id="R_EX_actn__R_e_REV" name="_R__Acetoin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_actn__R_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_actn__R_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98226"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_actn__R_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ade_e_REV" sboTerm="SBO:0000627" id="R_EX_ade_e_REV" name="Adenine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ade_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ade_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98229"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ade_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_adn_e_REV" sboTerm="SBO:0000627" id="R_EX_adn_e_REV" name="Adenosine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_adn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_adn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98230"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_adocbl_e_REV" sboTerm="SBO:0000627" id="R_EX_adocbl_e_REV" name="Adenosylcobalamin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_adocbl_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_adocbl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98231"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_adocbl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ag_e_REV" sboTerm="SBO:0000627" id="R_EX_ag_e_REV" name="silver_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ag_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ag_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98238"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ag_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_agm_e_REV" sboTerm="SBO:0000627" id="R_EX_agm_e_REV" name="Agmatine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_agm_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_agm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98239"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_agm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_akg_e_REV" sboTerm="SBO:0000627" id="R_EX_akg_e_REV" name="2_Oxoglutarate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_akg_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_akg_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98247"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_akg_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ala_B_e_REV" sboTerm="SBO:0000627" id="R_EX_ala_B_e_REV" name="beta_Alanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ala_B_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ala_B_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98248"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ala_B_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ala__D_e_REV" sboTerm="SBO:0000627" id="R_EX_ala__D_e_REV" name="D_Alanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ala__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ala__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98255"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ala__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ala__L_e_REV" sboTerm="SBO:0000627" id="R_EX_ala__L_e_REV" name="L_Alanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ala__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ala__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98256"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ala__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_alaala_e_REV" sboTerm="SBO:0000627" id="R_EX_alaala_e_REV" name="D_Alanyl_D_alanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_alaala_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_alaala_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98257"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_alaala_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_alahis_e_REV" sboTerm="SBO:0000627" id="R_EX_alahis_e_REV" name="L_alaninylhistidine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alahis_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_alahis_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_alaleu_e_REV" sboTerm="SBO:0000627" id="R_EX_alaleu_e_REV" name="L_alaninylleucine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alaleu_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_alaleu_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_alathr_e_REV" sboTerm="SBO:0000627" id="R_EX_alathr_e_REV" name="L_alaninylthreonine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alathr_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_alathr_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_alatrp_e_REV" sboTerm="SBO:0000627" id="R_EX_alatrp_e_REV" name="L_alaninyltryptophan_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_alatrp_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_alatrp_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_algac_MG_14_e_REV" sboTerm="SBO:0000627" id="R_EX_algac_MG_14_e_REV" name="alginate__1_units_of_acetylated_D_mannuronate_and_4_units_of_L_guluronate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_14_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_algac_MG_14_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_algac_MG_23_e_REV" sboTerm="SBO:0000627" id="R_EX_algac_MG_23_e_REV" name="alginate__2_units_of_acetylated_D_mannuronate_and_3_units_of_L_guluronate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_23_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_algac_MG_23_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_algac_MG_32_e_REV" sboTerm="SBO:0000627" id="R_EX_algac_MG_32_e_REV" name="alginate__3_units_of_acetylated_D_mannuronate_and_2_units_of_L_guluronate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_32_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_algac_MG_32_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_algac_MG_41_e_REV" sboTerm="SBO:0000627" id="R_EX_algac_MG_41_e_REV" name="alginate__4_units_of_acetylated_D_mannuronate_and_one_unit_of_L_guluronate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac_MG_41_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_algac_MG_41_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_algac__M_e_REV" sboTerm="SBO:0000627" id="R_EX_algac__M_e_REV" name="Alginate__5_units_of__D_mannuronate_completelly_acetylated__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_algac__M_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_algac__M_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_alltn_e_REV" sboTerm="SBO:0000627" id="R_EX_alltn_e_REV" name="Allantoin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_alltn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_alltn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98261"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_alltn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_apc_e_REV" sboTerm="SBO:0000627" id="R_EX_apc_e_REV" name="Ampicillin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_apc_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_arbtn_e_REV" sboTerm="SBO:0000627" id="R_EX_arbtn_e_REV" name="aerobactin_minus_Fe3_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arbtn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arbtn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98284"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_arbtn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_arbtn_fe3_e_REV" sboTerm="SBO:0000627" id="R_EX_arbtn_fe3_e_REV" name="Aerobactin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arbtn_fe3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arbtn_fe3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98285"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_arbtn_fe3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_arg__D_e_REV" sboTerm="SBO:0000627" id="R_EX_arg__D_e_REV" name="D_Arginine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arg__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arg__D_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_arg__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_arg__L_e_REV" sboTerm="SBO:0000627" id="R_EX_arg__L_e_REV" name="L_Arginine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_arg__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_arg__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98286"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_asn__D_e_REV" sboTerm="SBO:0000627" id="R_EX_asn__D_e_REV" name="D_Asparagine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_asn__D_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_asn__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_asn__L_e_REV" sboTerm="SBO:0000627" id="R_EX_asn__L_e_REV" name="L_Asparagine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_asn__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_asn__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98292"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_asn__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_aso3_e_REV" sboTerm="SBO:0000627" id="R_EX_aso3_e_REV" name="arsenite_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_aso3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_aso3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98293"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_aso4_e_REV" sboTerm="SBO:0000627" id="R_EX_aso4_e_REV" name="arsenate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_aso4_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_aso4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98294"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_aso4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_asp__L_e_REV" sboTerm="SBO:0000627" id="R_EX_asp__L_e_REV" name="L_Aspartate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_asp__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_asp__L_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_asp__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_balaala_e_REV" sboTerm="SBO:0000627" id="R_EX_balaala_e_REV" name="beta_alanyl_L_alanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balaala_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_balaala_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_balabala_e_REV" sboTerm="SBO:0000627" id="R_EX_balabala_e_REV" name="beta_alanyl_beta_alanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balabala_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_balabala_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_balagly_e_REV" sboTerm="SBO:0000627" id="R_EX_balagly_e_REV" name="beta_alanyl_L_glycine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balagly_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_balagly_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_balaleu_e_REV" sboTerm="SBO:0000627" id="R_EX_balaleu_e_REV" name="beta_alanyl_L_leucine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balaleu_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_balaleu_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_balamd_e_REV" sboTerm="SBO:0000627" id="R_EX_balamd_e_REV" name="beta_Alaninamide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_balamd_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_balamd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_bhb_e_REV" sboTerm="SBO:0000627" id="R_EX_bhb_e_REV" name="_R__3_Hydroxybutanoate_transport_via_H_symport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_bhb_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_bhb_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_bhb_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_biliverd_e_REV" sboTerm="SBO:0000627" id="R_EX_biliverd_e_REV" name="Biliverdin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_biliverd_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_biliverd_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_biliverd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_btd_RR_e_REV" sboTerm="SBO:0000627" id="R_EX_btd_RR_e_REV" name="_R_R__2_3_Butanediol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_btd_RR_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_btd_RR_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98303"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_btd_RR_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_btn_e_REV" sboTerm="SBO:0000627" id="R_EX_btn_e_REV" name="Biotin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_btn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_btn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98304"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_btn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_butso3_e_REV" sboTerm="SBO:0000627" id="R_EX_butso3_e_REV" name="butanesulfonate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_butso3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_butso3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_butso3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_bz_e_REV" sboTerm="SBO:0000627" id="R_EX_bz_e_REV" name="Benzoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_bz_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_bz_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98308"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_bz_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ca2_e_REV" sboTerm="SBO:0000627" id="R_EX_ca2_e_REV" name="Calcium_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ca2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ca2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98318"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ca2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_carn_e_REV" sboTerm="SBO:0000627" id="R_EX_carn_e_REV" name="L_Carnosine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_carn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_carn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98320"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_carn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_catechol_e_REV" sboTerm="SBO:0000627" id="R_EX_catechol_e_REV" name="Catechol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_catechol_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_catechol_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98323"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_catechol_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cbi_e_REV" sboTerm="SBO:0000627" id="R_EX_cbi_e_REV" name="Cobinamide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cbi_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cbi_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98325"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cbi_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cbl1_e_REV" sboTerm="SBO:0000627" id="R_EX_cbl1_e_REV" name="Cob_I_alamin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cbl1_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cbl1_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98326"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cbl1_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cd2_e_REV" sboTerm="SBO:0000627" id="R_EX_cd2_e_REV" name="Cadmium_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cd2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cd2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98330"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cd2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cell4_e_REV" sboTerm="SBO:0000627" id="R_EX_cell4_e_REV" name="cellulose__n4_repeating_units__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cell4_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cell4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98332"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cell4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cgly_e_REV" sboTerm="SBO:0000627" id="R_EX_cgly_e_REV" name="Cys_Gly_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cgly_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cgly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98336"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_chol_e_REV" sboTerm="SBO:0000627" id="R_EX_chol_e_REV" name="Choline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_chol_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_chol_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98339"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_chols_e_REV" sboTerm="SBO:0000627" id="R_EX_chols_e_REV" name="Choline_sulfate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_chols_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_chols_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98341"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_chols_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_chor_e_REV" sboTerm="SBO:0000627" id="R_EX_chor_e_REV" name="chorismate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_chor_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_chor_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98342"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_chor_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cinnm_e_REV" sboTerm="SBO:0000627" id="R_EX_cinnm_e_REV" name="trans_Cinnamate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_cinnm_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cinnm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cit_e_REV" sboTerm="SBO:0000627" id="R_EX_cit_e_REV" name="Citrate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cit_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cit_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98346"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cit_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cl_e_REV" sboTerm="SBO:0000627" id="R_EX_cl_e_REV" name="Chloride_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cl_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98349"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cm_e_REV" sboTerm="SBO:0000627" id="R_EX_cm_e_REV" name="Chloramphenicol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cm_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98351"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cmcbtt_e_REV" sboTerm="SBO:0000627" id="R_EX_cmcbtt_e_REV" name="carboxymycobactin_T__R8_carbon__final_carbon_is_carboxyl_group__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_cmcbtt_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_co2_e_REV" sboTerm="SBO:0000627" id="R_EX_co2_e_REV" name="CO2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB7N100"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_co2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_co2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98353"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_co_e_REV" sboTerm="SBO:0000627" id="R_EX_co_e_REV" name="Carbon_monoxide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_co_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_co_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98354"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_co_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cobalt2_e_REV" sboTerm="SBO:0000627" id="R_EX_cobalt2_e_REV" name="Co2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cobalt2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cobalt2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98356"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cobalt2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_confrl_e_REV" sboTerm="SBO:0000627" id="R_EX_confrl_e_REV" name="Coniferol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_confrl_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_confrl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98361"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_confrl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_creat_e_REV" sboTerm="SBO:0000627" id="R_EX_creat_e_REV" name="Creatine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_creat_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_creat_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98366"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_creat_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_crn_e_REV" sboTerm="SBO:0000627" id="R_EX_crn_e_REV" name="L_Carnitine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_crn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_crn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98371"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_crn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cro2_e_REV" sboTerm="SBO:0000627" id="R_EX_cro2_e_REV" name="chromite_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_cro2_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cro2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cro4_e_REV" sboTerm="SBO:0000627" id="R_EX_cro4_e_REV" name="chromate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cro4_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cro4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98372"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cro4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_crtn_e_REV" sboTerm="SBO:0000627" id="R_EX_crtn_e_REV" name="Creatinine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_crtn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_crtn_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_crtn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_csn_e_REV" sboTerm="SBO:0000627" id="R_EX_csn_e_REV" name="Cytosine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_csn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_csn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98376"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_csn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cu2_e_REV" sboTerm="SBO:0000627" id="R_EX_cu2_e_REV" name="Cu2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cu2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cu2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98384"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cu_e_REV" sboTerm="SBO:0000627" id="R_EX_cu_e_REV" name="Cu_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cu_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cu_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98385"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cu_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cyan_e_REV" sboTerm="SBO:0000627" id="R_EX_cyan_e_REV" name="Hydrogen_cyanide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cyan_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cyan_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98386"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cys__D_e_REV" sboTerm="SBO:0000627" id="R_EX_cys__D_e_REV" name="D_Cysteine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cys__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cys__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98388"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cys__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_cys__L_e_REV" sboTerm="SBO:0000627" id="R_EX_cys__L_e_REV" name="L_Cysteine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_cys__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cys__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98389"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_cys__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dag181d9_e_REV" sboTerm="SBO:0000627" id="R_EX_dag181d9_e_REV" name="1_2_Diacyl_sn_glycerol__nC181d9__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dag181d9_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dag181d9_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dag182d9d12_e_REV" sboTerm="SBO:0000627" id="R_EX_dag182d9d12_e_REV" name="1_2_Diacyl_sn_glycerol__nC182d9d12__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dag182d9d12_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dag182d9d12_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dca_e_REV" sboTerm="SBO:0000627" id="R_EX_dca_e_REV" name="Decanoate__n_C100__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_dca_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_dca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98398"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ddca_e_REV" sboTerm="SBO:0000627" id="R_EX_ddca_e_REV" name="Dodecanoate__n_C120__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ddca_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ddca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98403"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ddca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dgudbutn_e_REV" sboTerm="SBO:0000627" id="R_EX_dgudbutn_e_REV" name="1_4_Diguanidinobutane_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dgudbutn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dgudbutn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dmanur_e_REV" sboTerm="SBO:0000627" id="R_EX_dmanur_e_REV" name="dimmer_of_D_mannuronate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dmanur_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dmanur_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dmgly_e_REV" sboTerm="SBO:0000627" id="R_EX_dmgly_e_REV" name="N_N_Dimethylglycine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_dmgly_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_dmgly_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dmgly_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dmso2_e_REV" sboTerm="SBO:0000627" id="R_EX_dmso2_e_REV" name="Dimethyl_sulfone_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_dmso2_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dmso2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_dopa_e_REV" sboTerm="SBO:0000627" id="R_EX_dopa_e_REV" name="Dopamine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_dopa_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_dopa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98427"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_dopa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ecto__L_e_REV" sboTerm="SBO:0000627" id="R_EX_ecto__L_e_REV" name="L_Ectoine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_ecto__L_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ecto__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_enter_e_REV" sboTerm="SBO:0000627" id="R_EX_enter_e_REV" name="Enterochelin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_enter_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_enter_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98449"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_enter_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_etha_e_REV" sboTerm="SBO:0000627" id="R_EX_etha_e_REV" name="Ethanolamine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_etha_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_etha_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98459"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_etha_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ethso3_e_REV" sboTerm="SBO:0000627" id="R_EX_ethso3_e_REV" name="ethanesulfonate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ethso3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ethso3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ethso3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_etoh_e_REV" sboTerm="SBO:0000627" id="R_EX_etoh_e_REV" name="Ethanol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_etoh_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_etoh_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98461"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_etoh_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fald_e_REV" sboTerm="SBO:0000627" id="R_EX_fald_e_REV" name="Formaldehyde_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fald_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fald_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fcmcbtt_e_REV" sboTerm="SBO:0000627" id="R_EX_fcmcbtt_e_REV" name="iron_III__chelated_carboxymycobactin_T__R8_carbon__final_carbon_is_carboxyl_group__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fcmcbtt_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fe2_e_REV" sboTerm="SBO:0000627" id="R_EX_fe2_e_REV" name="Fe2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fe2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98464"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fe2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fe3_e_REV" sboTerm="SBO:0000627" id="R_EX_fe3_e_REV" name="Fe3_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fe3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98465"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fe3dcit_e_REV" sboTerm="SBO:0000627" id="R_EX_fe3dcit_e_REV" name="Fe_III_dicitrate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fe3dcit_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe3dcit_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98466"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fe3dcit_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fe3mcbtt_e_REV" sboTerm="SBO:0000627" id="R_EX_fe3mcbtt_e_REV" name="Iron_III__chelated_mycobactin_T_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fe3mcbtt_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fe3mcbtt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fe3pyovd_e_REV" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_e_REV" name="Ferrypyoverdine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fe3pyovd_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fe3pyovd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fe3pyovd_kt_e_REV" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_kt_e_REV" name="Ferrypyoverdine__P_putida_KT2440_specific__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_fe3pyovd_kt_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fecrm_e_REV" sboTerm="SBO:0000627" id="R_EX_fecrm_e_REV" name="Ferrichrome_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fecrm_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fecrm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98474"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fecrm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fecrm_un_e_REV" sboTerm="SBO:0000627" id="R_EX_fecrm_un_e_REV" name="Ferrichrome_minus_Fe_III__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fecrm_un_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fecrm_un_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98475"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fecrm_un_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_feenter_e_REV" sboTerm="SBO:0000627" id="R_EX_feenter_e_REV" name="Fe_enterobactin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_feenter_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_feenter_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98476"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_feenter_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_feoxam_e_REV" sboTerm="SBO:0000627" id="R_EX_feoxam_e_REV" name="ferroxamine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_feoxam_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_feoxam_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98477"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_feoxam_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_feoxam_un_e_REV" sboTerm="SBO:0000627" id="R_EX_feoxam_un_e_REV" name="ferroxamine_minus_Fe_3__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_feoxam_un_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_feoxam_un_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98478"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_feoxam_un_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fer_e_REV" sboTerm="SBO:0000627" id="R_EX_fer_e_REV" name="Ferulate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fer_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fer_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98479"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fer_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_for_e_REV" sboTerm="SBO:0000627" id="R_EX_for_e_REV" name="Formate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_for_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_for_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98490"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_for_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fru_e_REV" sboTerm="SBO:0000627" id="R_EX_fru_e_REV" name="D_Fructose_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fru_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fru_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98492"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fru_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_fum_e_REV" sboTerm="SBO:0000627" id="R_EX_fum_e_REV" name="Fumarate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_fum_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fum_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98523"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_fum_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ga_e_REV" sboTerm="SBO:0000627" id="R_EX_ga_e_REV" name="Gallic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ga_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ga_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98532"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ga_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_galct__D_e_REV" sboTerm="SBO:0000627" id="R_EX_galct__D_e_REV" name="D_Galactarate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_galct__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_galct__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98539"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_galct__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_galur_e_REV" sboTerm="SBO:0000627" id="R_EX_galur_e_REV" name="D_Galacturonate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_galur_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_galur_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98555"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_galur_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glc__D_e_REV" sboTerm="SBO:0000627" id="R_EX_glc__D_e_REV" name="D_Glucose_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB4N6"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glc__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glc__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98569"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glc__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glcn_e_REV" sboTerm="SBO:0000627" id="R_EX_glcn_e_REV" name="D_Gluconate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glcn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcn_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glcn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glcr_e_REV" sboTerm="SBO:0000627" id="R_EX_glcr_e_REV" name="D_Glucarate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glcr_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcr_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98575"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glcr_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glcur_e_REV" sboTerm="SBO:0000627" id="R_EX_glcur_e_REV" name="D_Glucuronate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glcur_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcur_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98577"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glcur_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_gln__L_e_REV" sboTerm="SBO:0000627" id="R_EX_gln__L_e_REV" name="L_Glutamine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gln__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gln__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98579"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_gln__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glu__L_e_REV" sboTerm="SBO:0000627" id="R_EX_glu__L_e_REV" name="L_Glutamate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glu__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glu__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98583"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glu__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glutar_e_REV" sboTerm="SBO:0000627" id="R_EX_glutar_e_REV" name="Glutarate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glutar_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glutar_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_gly_e_REV" sboTerm="SBO:0000627" id="R_EX_gly_e_REV" name="Glycine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gly_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98591"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_gly_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyald_e_REV" sboTerm="SBO:0000627" id="R_EX_glyald_e_REV" name="D_Glyceraldehyde_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyald_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyald_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98596"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyb_e_REV" sboTerm="SBO:0000627" id="R_EX_glyb_e_REV" name="Glycine_betaine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyb_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyb_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98597"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyb_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyc__R_e_REV" sboTerm="SBO:0000627" id="R_EX_glyc__R_e_REV" name="_R__Glycerate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyc__R_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyc__R_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98600"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyc__R_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyc_e_REV" sboTerm="SBO:0000627" id="R_EX_glyc_e_REV" name="Glycerol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyc_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98602"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyclt_e_REV" sboTerm="SBO:0000627" id="R_EX_glyclt_e_REV" name="Glycolate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyclt_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyclt_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98603"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyclt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glycol_e_REV" sboTerm="SBO:0000627" id="R_EX_glycol_e_REV" name="Glycol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glycol_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glycol_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glygln_e_REV" sboTerm="SBO:0000627" id="R_EX_glygln_e_REV" name="L_glycinylglutamine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glygln_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glygln_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyglu_e_REV" sboTerm="SBO:0000627" id="R_EX_glyglu_e_REV" name="L_glycinylglutamate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glyglu_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyglu_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glygly_e_REV" sboTerm="SBO:0000627" id="R_EX_glygly_e_REV" name="Glycylglycine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glygly_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glygly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98606"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glygly_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glymet_e_REV" sboTerm="SBO:0000627" id="R_EX_glymet_e_REV" name="L_Glycinylmethionine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glymet_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glymet_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyphe_e_REV" sboTerm="SBO:0000627" id="R_EX_glyphe_e_REV" name="Glycyl_L_phenylalanin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_glyphe_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glyphe_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98611"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyphe_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_glyser_e_REV" sboTerm="SBO:0000627" id="R_EX_glyser_e_REV" name="L_glycinylserine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_glyser_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_glyser_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_gua_e_REV" sboTerm="SBO:0000627" id="R_EX_gua_e_REV" name="Guanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gua_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gua_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98632"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_gua_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_gudac_e_REV" sboTerm="SBO:0000627" id="R_EX_gudac_e_REV" name="Guanidinoacetate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_gudac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gudac_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_gudac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_gudptn_e_REV" sboTerm="SBO:0000627" id="R_EX_gudptn_e_REV" name="delta_Guanidinovaleric_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_gudptn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_gudptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_h2o2_e_REV" sboTerm="SBO:0000627" id="R_EX_h2o2_e_REV" name="Hydrogen_peroxide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h2o2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2o2_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_h2o2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_h2o_e_REV" sboTerm="SBO:0000627" id="R_EX_h2o_e_REV" name="H2O_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB7N100"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h2o_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2o_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_h2s_e_REV" sboTerm="SBO:0000627" id="R_EX_h2s_e_REV" name="Hydrogen_sulfide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h2s_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2s_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98642"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_h_e_REV" sboTerm="SBO:0000627" id="R_EX_h_e_REV" name="H_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB7N100"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_h_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98643"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hco3_e_REV" sboTerm="SBO:0000627" id="R_EX_hco3_e_REV" name="Bicarbonate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hco3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hco3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hcys__L_e_REV" sboTerm="SBO:0000627" id="R_EX_hcys__L_e_REV" name="L_homocysteine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hcys__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hcys__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98649"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hcys__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hdca_e_REV" sboTerm="SBO:0000627" id="R_EX_hdca_e_REV" name="Hexadecanoate__n_C160__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hdca_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hdca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98650"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hdca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hdcea_e_REV" sboTerm="SBO:0000627" id="R_EX_hdcea_e_REV" name="hexadecenoate__n_C161__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hdcea_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hdcea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98651"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hdcea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hg2_e_REV" sboTerm="SBO:0000627" id="R_EX_hg2_e_REV" name="Hg2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hg2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hg2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98655"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hgentis_e_REV" sboTerm="SBO:0000627" id="R_EX_hgentis_e_REV" name="Homogentisate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hgentis_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hgentis_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hgentis_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_his__L_e_REV" sboTerm="SBO:0000627" id="R_EX_his__L_e_REV" name="L_Histidine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_his__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_his__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98656"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_his__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hisgly_e_REV" sboTerm="SBO:0000627" id="R_EX_hisgly_e_REV" name="L_histidinylglycine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_hisgly_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hisgly_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hishis_e_REV" sboTerm="SBO:0000627" id="R_EX_hishis_e_REV" name="L_histidinylhistidine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_hishis_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hishis_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hom__L_e_REV" sboTerm="SBO:0000627" id="R_EX_hom__L_e_REV" name="L_Homoserine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hom__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hom__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98658"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hom__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hpta_e_REV" sboTerm="SBO:0000627" id="R_EX_hpta_e_REV" name="heptanoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_hpta_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hpta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hxa_e_REV" sboTerm="SBO:0000627" id="R_EX_hxa_e_REV" name="Hexanoate__n_C60__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hxa_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hxa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98664"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hxa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_hxan_e_REV" sboTerm="SBO:0000627" id="R_EX_hxan_e_REV" name="Hypoxanthine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_hxan_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_hxan_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98665"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_hxan_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_icit_e_REV" sboTerm="SBO:0000627" id="R_EX_icit_e_REV" name="Isocitrate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_icit_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_icit_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ile__L_e_REV" sboTerm="SBO:0000627" id="R_EX_ile__L_e_REV" name="L_Isoleucine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ile__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ile__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98677"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ile__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ind3ac_e_REV" sboTerm="SBO:0000627" id="R_EX_ind3ac_e_REV" name="Indole_3_acetate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ind3ac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ind3ac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98679"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ind3ac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_indole_e_REV" sboTerm="SBO:0000627" id="R_EX_indole_e_REV" name="Indole_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_indole_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_indole_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98681"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ins_e_REV" sboTerm="SBO:0000627" id="R_EX_ins_e_REV" name="Inosine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ins_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ins_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98683"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ins_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_isetac_e_REV" sboTerm="SBO:0000627" id="R_EX_isetac_e_REV" name="Isethionic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_isetac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_isetac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98684"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_isetac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_k_e_REV" sboTerm="SBO:0000627" id="R_EX_k_e_REV" name="K_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_k_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_k_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98686"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_k_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_lac__D_e_REV" sboTerm="SBO:0000627" id="R_EX_lac__D_e_REV" name="D_lactate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lac__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lac__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98694"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_lac__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_lac__L_e_REV" sboTerm="SBO:0000627" id="R_EX_lac__L_e_REV" name="L_Lactate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lac__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lac__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98695"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_lac__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_leu__D_e_REV" sboTerm="SBO:0000627" id="R_EX_leu__D_e_REV" name="D_Leucine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_leu__D_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_leu__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_leu__L_e_REV" sboTerm="SBO:0000627" id="R_EX_leu__L_e_REV" name="L_Leucine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_leu__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_leu__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98700"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_leu__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_leuleu_e_REV" sboTerm="SBO:0000627" id="R_EX_leuleu_e_REV" name="leucyl_leucine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_leuleu_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_leuleu_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98708"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_leuleu_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_lnlc_e_REV" sboTerm="SBO:0000627" id="R_EX_lnlc_e_REV" name="linoleic_acid__all_cis_C182__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lnlc_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lnlc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98719"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_lnlc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_lpspput_e_REV" sboTerm="SBO:0000627" id="R_EX_lpspput_e_REV" name="Lipopolysacharide__LPS__from_P_putida_KT2440_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_lpspput_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_lpspput_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_lys__D_e_REV" sboTerm="SBO:0000627" id="R_EX_lys__D_e_REV" name="D_Lysine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_lys__D_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_lys__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_lys__L_e_REV" sboTerm="SBO:0000627" id="R_EX_lys__L_e_REV" name="L_Lysine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_lys__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_lys__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98724"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_lys__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_m_xyl_e_REV" sboTerm="SBO:0000627" id="R_EX_m_xyl_e_REV" name="m_Xylene_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_m_xyl_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_m_xyl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98726"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mal__D_e_REV" sboTerm="SBO:0000627" id="R_EX_mal__D_e_REV" name="D_Malate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mal__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mal__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98730"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mal__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mal__L_e_REV" sboTerm="SBO:0000627" id="R_EX_mal__L_e_REV" name="L_Malate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mal__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mal__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98731"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mal__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_man_e_REV" sboTerm="SBO:0000627" id="R_EX_man_e_REV" name="D_Mannose_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_man_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_man_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98741"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_man_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_manur_e_REV" sboTerm="SBO:0000627" id="R_EX_manur_e_REV" name="D_Mannuronate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_manur_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_manur_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mcbtt_e_REV" sboTerm="SBO:0000627" id="R_EX_mcbtt_e_REV" name="mycobactin_T_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_mcbtt_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mcbtt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_meoh_e_REV" sboTerm="SBO:0000627" id="R_EX_meoh_e_REV" name="methanol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_meoh_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_meoh_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98748"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_met__L_e_REV" sboTerm="SBO:0000627" id="R_EX_met__L_e_REV" name="L_Methionine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_met__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_met__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98753"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_met__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mg2_e_REV" sboTerm="SBO:0000627" id="R_EX_mg2_e_REV" name="Mg_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mg2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mg2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98756"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mg2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mmet_e_REV" sboTerm="SBO:0000627" id="R_EX_mmet_e_REV" name="S_Methyl_L_methionine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mmet_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mmet_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98760"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mmet_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mn2_e_REV" sboTerm="SBO:0000627" id="R_EX_mn2_e_REV" name="Mn2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mn2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mn2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98761"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mn2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mobd_e_REV" sboTerm="SBO:0000627" id="R_EX_mobd_e_REV" name="Molybdate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mobd_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mobd_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98764"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mobd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mso3_e_REV" sboTerm="SBO:0000627" id="R_EX_mso3_e_REV" name="methanesulfonate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_mso3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mso3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98766"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mso3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_na1_e_REV" sboTerm="SBO:0000627" id="R_EX_na1_e_REV" name="Sodium_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_na1_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_na1_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_na1_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_nac_e_REV" sboTerm="SBO:0000627" id="R_EX_nac_e_REV" name="Nicotinate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_nac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_nac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98782"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_nh4_e_REV" sboTerm="SBO:0000627" id="R_EX_nh4_e_REV" name="Ammonia_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB6N30"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_nh4_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_nh4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98786"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ni2_e_REV" sboTerm="SBO:0000627" id="R_EX_ni2_e_REV" name="Ni2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ni2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ni2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98787"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ni2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_no2_e_REV" sboTerm="SBO:0000627" id="R_EX_no2_e_REV" name="Nitrite_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_no2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_no2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98790"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_no2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_no3_e_REV" sboTerm="SBO:0000627" id="R_EX_no3_e_REV" name="Nitrate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_no3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_no3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98791"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_no3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_no_e_REV" sboTerm="SBO:0000627" id="R_EX_no_e_REV" name="Nitric_oxide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_no_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_no_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_no_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_nona_e_REV" sboTerm="SBO:0000627" id="R_EX_nona_e_REV" name="Nonanoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_nona_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_nona_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_o2_e_REV" sboTerm="SBO:0000627" id="R_EX_o2_e_REV" name="O2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_o2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_o2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98799"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_EX_o_xyl_e_REV" sboTerm="SBO:0000627" id="R_EX_o_xyl_e_REV" name="o_methyltoluene_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_o_xyl_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_o_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_oaa_e_REV" sboTerm="SBO:0000627" id="R_EX_oaa_e_REV" name="Oxaloacetate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_oaa_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_oaa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98802"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_oaa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ocdca_e_REV" sboTerm="SBO:0000627" id="R_EX_ocdca_e_REV" name="octadecanoate__n_C180__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ocdca_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ocdca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98807"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ocdca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ocdcea_e_REV" sboTerm="SBO:0000627" id="R_EX_ocdcea_e_REV" name="octadecenoate__n_C181__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ocdcea_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ocdcea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98808"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ocdcea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_octa_e_REV" sboTerm="SBO:0000627" id="R_EX_octa_e_REV" name="octanoate__n_C80__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_octa_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_octa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98810"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_octa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_orn__D_e_REV" sboTerm="SBO:0000627" id="R_EX_orn__D_e_REV" name="D_Ornithine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_orn__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orn__D_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_orn__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_orn_e_REV" sboTerm="SBO:0000627" id="R_EX_orn_e_REV" name="Ornithine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_orn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orn_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_orn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_orot_e_REV" sboTerm="SBO:0000627" id="R_EX_orot_e_REV" name="Orotate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_orot_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orot_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98814"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_orot_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_oxa_e_REV" sboTerm="SBO:0000627" id="R_EX_oxa_e_REV" name="Oxalate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_oxa_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_oxa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98815"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_oxa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_5g2oxpt_e_REV" sboTerm="SBO:0000627" id="R_EX_5g2oxpt_e_REV" name="2_Oxoarginine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_5g2oxpt_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_5g2oxpt_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_5g2oxpt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_p_xyl_e_REV" sboTerm="SBO:0000627" id="R_EX_p_xyl_e_REV" name="p_methyltoluene_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_p_xyl_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_p_xyl_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98816"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pac_e_REV" sboTerm="SBO:0000627" id="R_EX_pac_e_REV" name="Phenylacetic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pac_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98817"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pacald_e_REV" sboTerm="SBO:0000627" id="R_EX_pacald_e_REV" name="Phenylacetaldehyde_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pacald_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pacald_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98818"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pacald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pb2_e_REV" sboTerm="SBO:0000627" id="R_EX_pb2_e_REV" name="Pb2_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pb2_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pb2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pea_e_REV" sboTerm="SBO:0000627" id="R_EX_pea_e_REV" name="Phenylethylalcohol_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pea_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pea_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_peamn_e_REV" sboTerm="SBO:0000627" id="R_EX_peamn_e_REV" name="Phenethylamine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_peamn_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_peamn_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98830"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_peamn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pentso3_e_REV" sboTerm="SBO:0000627" id="R_EX_pentso3_e_REV" name="pentanesulfonate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pentso3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pentso3_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98837"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pentso3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phe__D_e_REV" sboTerm="SBO:0000627" id="R_EX_phe__D_e_REV" name="D_Phenylalanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phe__D_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phe__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phe__L_e_REV" sboTerm="SBO:0000627" id="R_EX_phe__L_e_REV" name="L_Phenylalanine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_phe__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_phe__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98845"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phe__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phedca_e_REV" sboTerm="SBO:0000627" id="R_EX_phedca_e_REV" name="10_Phenyldecanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phedca_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phedca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phehpa_e_REV" sboTerm="SBO:0000627" id="R_EX_phehpa_e_REV" name="7_Phenylheptanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phehpa_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phehpa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phehxa_e_REV" sboTerm="SBO:0000627" id="R_EX_phehxa_e_REV" name="6_Phenylhexanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phehxa_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phehxa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pheme_e_REV" sboTerm="SBO:0000627" id="R_EX_pheme_e_REV" name="Protoheme_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pheme_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pheme_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98848"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phenona_e_REV" sboTerm="SBO:0000627" id="R_EX_phenona_e_REV" name="9_Phenylnonanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phenona_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phenona_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pheocta_e_REV" sboTerm="SBO:0000627" id="R_EX_pheocta_e_REV" name="8_Phenyloctanoic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pheocta_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pheocta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phept_e_REV" sboTerm="SBO:0000627" id="R_EX_phept_e_REV" name="5_phenylvaleric_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_phept_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phept_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_phpyr_e_REV" sboTerm="SBO:0000627" id="R_EX_phpyr_e_REV" name="Phenylpyruvate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_phpyr_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_phpyr_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_phpyr_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pi_e_REV" sboTerm="SBO:0000627" id="R_EX_pi_e_REV" name="Phosphate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pi_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pi_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98854"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pi_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pnto__R_e_REV" sboTerm="SBO:0000627" id="R_EX_pnto__R_e_REV" name="_R__Pantothenate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pnto__R_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pnto__R_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98856"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pnto__R_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ppa_e_REV" sboTerm="SBO:0000627" id="R_EX_ppa_e_REV" name="Propionate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ppa_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ppa_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98857"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ppa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ppi_e_REV" sboTerm="SBO:0000627" id="R_EX_ppi_e_REV" name="Diphosphate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ppi_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ppi_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98860"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ppi_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_prealg_MG_14_e_REV" sboTerm="SBO:0000627" id="R_EX_prealg_MG_14_e_REV" name="beta_1_4_glycosidic__1__beta_D_mannuronic__4__L_guluronic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_14_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_prealg_MG_14_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_prealg_MG_23_e_REV" sboTerm="SBO:0000627" id="R_EX_prealg_MG_23_e_REV" name="beta_1_4_glycosidic__2__beta_D_mannuronic__3__L_guluronic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_23_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_prealg_MG_23_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_prealg_MG_32_e_REV" sboTerm="SBO:0000627" id="R_EX_prealg_MG_32_e_REV" name="beta_1_4_glycosidic__3__beta_D_mannuronic__2__L_guluronic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_32_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_prealg_MG_32_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_prealg_MG_41_e_REV" sboTerm="SBO:0000627" id="R_EX_prealg_MG_41_e_REV" name="beta_1_4_glycosidic__4__beta_D_mannuronic__1__L_guluronic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealg_MG_41_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_prealg_MG_41_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_prealginate__G_e_REV" sboTerm="SBO:0000627" id="R_EX_prealginate__G_e_REV" name="Prealginate_KT2440___beta_1_4__linked_copolymers_of__b_L_guluronic_acid_5_units__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_prealginate__G_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_prealginate__G_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pro__D_e_REV" sboTerm="SBO:0000627" id="R_EX_pro__D_e_REV" name="D_Proline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pro__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pro__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98865"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pro__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pro__L_e_REV" sboTerm="SBO:0000627" id="R_EX_pro__L_e_REV" name="L_Proline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pro__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pro__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98866"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pro__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_progly_e_REV" sboTerm="SBO:0000627" id="R_EX_progly_e_REV" name="L_Prolinylglycine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_progly_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_progly_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98867"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_progly_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pta_e_REV" sboTerm="SBO:0000627" id="R_EX_pta_e_REV" name="Pentanoate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pta_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pta_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98885"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ptrc_e_REV" sboTerm="SBO:0000627" id="R_EX_ptrc_e_REV" name="Putrescine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ptrc_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ptrc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98888"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ptrc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ptsla_e_REV" sboTerm="SBO:0000627" id="R_EX_ptsla_e_REV" name="petroselaidic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_ptsla_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ptsla_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pydam_e_REV" sboTerm="SBO:0000627" id="R_EX_pydam_e_REV" name="Pyridoxamine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pydam_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pydam_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98892"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pydam_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pyovd_e_REV" sboTerm="SBO:0000627" id="R_EX_pyovd_e_REV" name="Pyoverdine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pyovd_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pyovd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pyovd_kt_e_REV" sboTerm="SBO:0000627" id="R_EX_pyovd_kt_e_REV" name="Pyoverdine__P_putida_specific__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pyovd_kt_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pyr_e_REV" sboTerm="SBO:0000627" id="R_EX_pyr_e_REV" name="Pyruvate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_pyr_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pyr_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98895"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pyr_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_quin_e_REV" sboTerm="SBO:0000627" id="R_EX_quin_e_REV" name="Quinate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_quin_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_quin_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98898"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_rib__D_e_REV" sboTerm="SBO:0000627" id="R_EX_rib__D_e_REV" name="D_Ribose_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_rib__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_rib__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98911"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_rib__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_sbo3_e_REV" sboTerm="SBO:0000627" id="R_EX_sbo3_e_REV" name="antimonite_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_sbo3_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_sbo3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_sel_e_REV" sboTerm="SBO:0000627" id="R_EX_sel_e_REV" name="Selenate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_sel_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_sel_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98927"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ser__D_e_REV" sboTerm="SBO:0000627" id="R_EX_ser__D_e_REV" name="D_Serine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ser__D_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ser__D_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98929"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ser__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ser__L_e_REV" sboTerm="SBO:0000627" id="R_EX_ser__L_e_REV" name="L_Serine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ser__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ser__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98930"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ser__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_sheme_e_REV" sboTerm="SBO:0000627" id="R_EX_sheme_e_REV" name="Siroheme_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_sheme_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_sheme_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_skm_e_REV" sboTerm="SBO:0000627" id="R_EX_skm_e_REV" name="Shikimate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_skm_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_skm_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98931"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_skm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_so2_e_REV" sboTerm="SBO:0000627" id="R_EX_so2_e_REV" name="sulfur_dioxide_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_so2_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_so2_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98934"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_so2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_so3_e_REV" sboTerm="SBO:0000627" id="R_EX_so3_e_REV" name="Sulfite_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_so3_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_so3_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_so3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_so4_e_REV" sboTerm="SBO:0000627" id="R_EX_so4_e_REV" name="Sulfate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_so4_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_so4_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98935"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_so4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_spmd_e_REV" sboTerm="SBO:0000627" id="R_EX_spmd_e_REV" name="Spermidine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_spmd_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_spmd_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98940"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_spmd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_succ_e_REV" sboTerm="SBO:0000627" id="R_EX_succ_e_REV" name="Succinate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_succ_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_succ_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_succ_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_sulfac_e_REV" sboTerm="SBO:0000627" id="R_EX_sulfac_e_REV" name="sulfoacetate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_sulfac_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_sulfac_e"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_sulfac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tag160_e_REV" sboTerm="SBO:0000627" id="R_EX_tag160_e_REV" name="Triacylglycerol__hexadecanoate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag160_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tag160_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tag180_e_REV" sboTerm="SBO:0000627" id="R_EX_tag180_e_REV" name="Triacylglycerol__octadecanoate__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag180_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tag180_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tag181d9_e_REV" sboTerm="SBO:0000627" id="R_EX_tag181d9_e_REV" name="Triacylglycerol__nC181d9__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag181d9_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tag181d9_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tag182d9d12_e_REV" sboTerm="SBO:0000627" id="R_EX_tag182d9d12_e_REV" name="Triacylglycerol__nC182d9d12__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tag182d9d12_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tag182d9d12_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_taur_e_REV" sboTerm="SBO:0000627" id="R_EX_taur_e_REV" name="Taurine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_taur_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_taur_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98956"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_taur_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tcynt_e_REV" sboTerm="SBO:0000627" id="R_EX_tcynt_e_REV" name="Thiocyanate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tcynt_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tcynt_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98962"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_thr__L_e_REV" sboTerm="SBO:0000627" id="R_EX_thr__L_e_REV" name="L_Threonine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_thr__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_thr__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98977"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_thr__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_thym_e_REV" sboTerm="SBO:0000627" id="R_EX_thym_e_REV" name="Thymine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_thym_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_thym_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98979"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_thym_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tmanur_e_REV" sboTerm="SBO:0000627" id="R_EX_tmanur_e_REV" name="trimmer_of_D_mannuronate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tmanur_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tmanur_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tnt_e_REV" sboTerm="SBO:0000627" id="R_EX_tnt_e_REV" name="2_4_6_Trinitrotoluene_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tnt_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tol_e_REV" sboTerm="SBO:0000627" id="R_EX_tol_e_REV" name="Toluene_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tol_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tol_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98986"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_trp__L_e_REV" sboTerm="SBO:0000627" id="R_EX_trp__L_e_REV" name="L_Tryptophan_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_trp__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_trp__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98991"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_trp__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tsul_e_REV" sboTerm="SBO:0000627" id="R_EX_tsul_e_REV" name="Thiosulfate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tsul_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tsul_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98995"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tsul_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ttdca_e_REV" sboTerm="SBO:0000627" id="R_EX_ttdca_e_REV" name="tetradecanoate__n_C140__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ttdca_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ttdca_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98996"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ttdca_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ttdcea_e_REV" sboTerm="SBO:0000627" id="R_EX_ttdcea_e_REV" name="tetradecenoate__n_C141__exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ttdcea_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ttdcea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98997"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ttdcea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ttrcyc_e_REV" sboTerm="SBO:0000627" id="R_EX_ttrcyc_e_REV" name="tetracycline_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ttrcyc_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ttrcyc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99000"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tungs_e_REV" sboTerm="SBO:0000627" id="R_EX_tungs_e_REV" name="tungstate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tungs_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tungs_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99001"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tungs_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tyr__D_e_REV" sboTerm="SBO:0000627" id="R_EX_tyr__D_e_REV" name="D_Tyrosine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_tyr__D_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tyr__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_tyr__L_e_REV" sboTerm="SBO:0000627" id="R_EX_tyr__L_e_REV" name="L_Tyrosine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_tyr__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tyr__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99005"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_tyr__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_ura_e_REV" sboTerm="SBO:0000627" id="R_EX_ura_e_REV" name="Uracil_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_ura_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ura_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99023"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_ura_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_urea_e_REV" sboTerm="SBO:0000627" id="R_EX_urea_e_REV" name="Urea_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_urea_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_urea_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99025"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_urea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_uri_e_REV" sboTerm="SBO:0000627" id="R_EX_uri_e_REV" name="Uridine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_uri_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_uri_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99026"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_uri_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_vacc_e_REV" sboTerm="SBO:0000627" id="R_EX_vacc_e_REV" name="vaccenic_acid_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_vacc_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_vacc_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99030"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_vacc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_val__D_e_REV" sboTerm="SBO:0000627" id="R_EX_val__D_e_REV" name="D_Valine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_val__D_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_val__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_val__L_e_REV" sboTerm="SBO:0000627" id="R_EX_val__L_e_REV" name="L_Valine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_val__L_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_val__L_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99031"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_val__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_vanln_e_REV" sboTerm="SBO:0000627" id="R_EX_vanln_e_REV" name="Vanillin_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_vanln_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_vanln_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99032"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_vanln_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_vanlt_e_REV" sboTerm="SBO:0000627" id="R_EX_vanlt_e_REV" name="Vanillate_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_vanlt_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_vanlt_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99033"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_vanlt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_xan_e_REV" sboTerm="SBO:0000627" id="R_EX_xan_e_REV" name="Xanthine_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_EX_xan_e_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_xan_e"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99041"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_xan_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_zn2_e_REV" sboTerm="SBO:0000627" id="R_EX_zn2_e_REV" name="Zinc_exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB5N10"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_zn2_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_zn2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FALDtex_REV" sboTerm="SBO:0000185" id="R_FALDtex_REV" name="formaldehyde_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FALDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FALDtpp_REV" sboTerm="SBO:0000185" id="R_FALDtpp_REV" name="formaldehyde_transport_via_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FALDtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FALGTHLs_REV" sboTerm="SBO:0000176" id="R_FALGTHLs_REV" name="formaldehyde_glutathione_ligase__spontaneous_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FALGTHLs_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALGTHLs"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hmgth_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE2tex_REV" sboTerm="SBO:0000185" id="R_FE2tex_REV" name="iron__II__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FE2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FE2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FE3DCITCH_REV" sboTerm="SBO:0000176" id="R_FE3DCITCH_REV" name="Ferric_dicitrate_chelation (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3DCITCH_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3PYOVDDR_REV" sboTerm="SBO:0000176" id="R_FE3PYOVDDR_REV" name="Ferrypyoverdine_dissociation_reduction (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDDR_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3pyovd_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FE3PYOVDDR2_REV" sboTerm="SBO:0000176" id="R_FE3PYOVDDR2_REV" name="Ferrypyoverdine__dissociation_reduction__Pputida_specific_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDDR2_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe2_p" stoichiometry="2" constant="true"/> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_kt_p" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3pyovd_kt_p" stoichiometry="2" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FE3PYOVDL_REV" sboTerm="SBO:0000176" id="R_FE3PYOVDL_REV" name="Ferripyoverdine_complex_formation (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDL_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3PYOVDL2_REV" sboTerm="SBO:0000176" id="R_FE3PYOVDL2_REV" name="Ferripyoverdine_complex_formation__P_putida_KT2440_specific_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_FE3PYOVDL2_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FERtex_REV" sboTerm="SBO:0000185" id="R_FERtex_REV" name="ferulate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FERtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fer_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fer_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FERtpp_REV" sboTerm="SBO:0000185" id="R_FERtpp_REV" name="ferulate_transport_via_diffusion___periplasm__ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FERtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FERtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fer_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fer_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FORtex_REV" sboTerm="SBO:0000185" id="R_FORtex_REV" name="formate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FORtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FORtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96761"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_for_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FRUtex_REV" sboTerm="SBO:0000185" id="R_FRUtex_REV" name="D_fructose_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FRUtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FRUtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fru_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fru_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1019"/> <fbc:geneProductRef fbc:geneProduct="PP_1445"/> <fbc:geneProductRef fbc:geneProduct="PP_3570"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUMtex_REV" sboTerm="SBO:0000185" id="R_FUMtex_REV" name="Fumarate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_FUMtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FUMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fum_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_G1SAT_REV" sboTerm="SBO:0000176" id="R_G1SAT_REV" name="glutamate_1_semialdehyde_aminotransferase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G1SAT_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G1SAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5aop_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu1sa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4784"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PD2_REV" sboTerm="SBO:0000176" id="R_G3PD2_REV" name="glycerol_3_phosphate_dehydrogenase__NADP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G3PD2_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4169"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PI_REV" sboTerm="SBO:0000176" id="R_G6PI_REV" name="Glucose_6_phosphate_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G6PI_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G6PI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99910"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_g6p_B_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1808"/> <fbc:geneProductRef fbc:geneProduct="PP_4701"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALCTt2rpp_REV" sboTerm="SBO:0000185" id="R_GALCTt2rpp_REV" name="D_galactarte_transport_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALCTt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galct__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galct__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3600"/> <fbc:geneProductRef fbc:geneProduct="PP_4758"/> <fbc:geneProductRef fbc:geneProduct="PP_1710"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALCTtex_REV" sboTerm="SBO:0000185" id="R_GALCTtex_REV" name="D_galactarte_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALCTtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galct__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galct__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GALURDH_REV" sboTerm="SBO:0000176" id="R_GALURDH_REV" name="galacturonate_dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GALURDH_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galct__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1171"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALURt2rpp_REV" sboTerm="SBO:0000185" id="R_GALURt2rpp_REV" name="D_galacturonate_transport_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALURt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALURt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galur_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1167"/> <fbc:geneProductRef fbc:geneProduct="PP_1169"/> <fbc:geneProductRef fbc:geneProduct="PP_1168"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALURtex_REV" sboTerm="SBO:0000185" id="R_GALURtex_REV" name="D_galacturonate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GALURtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALURtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_galur_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galur_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAt1_REV" sboTerm="SBO:0000185" id="R_GAt1_REV" name="Gallate_outer_membrane_porin_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GAt1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GAt1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ga_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ga_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2517"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAt2pp_REV" sboTerm="SBO:0000185" id="R_GAt2pp_REV" name="GAproton_symport_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GAt2pp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GAt2pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ga_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ga_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2519"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GK1_REV" sboTerm="SBO:0000176" id="R_GK1_REV" name="guanylate_kinase__GMPATP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GK1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GK1"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97091"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5296"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCNt2rpp_REV" sboTerm="SBO:0000185" id="R_GLCNt2rpp_REV" name="D_gluconate_transport_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCNt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCNt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3417"/> <fbc:geneProductRef fbc:geneProduct="PP_0652"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCNtex_REV" sboTerm="SBO:0000185" id="R_GLCNtex_REV" name="D_gluconate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcn_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCRt2rpp_REV" sboTerm="SBO:0000185" id="R_GLCRt2rpp_REV" name="D_glucarate_transport_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCRt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCRt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcr_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3600"/> <fbc:geneProductRef fbc:geneProduct="PP_4758"/> <fbc:geneProductRef fbc:geneProduct="PP_1710"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCRtex_REV" sboTerm="SBO:0000185" id="R_GLCRtex_REV" name="D_glucarate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCRtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCRtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcr_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcr_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLCURDH_REV" sboTerm="SBO:0000176" id="R_GLCURDH_REV" name="glucoronate_dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLCURDH_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1171"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCURt2rpp_REV" sboTerm="SBO:0000185" id="R_GLCURt2rpp_REV" name="D_glucuronate_transport_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCURt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCURt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcur_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcur_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1167"/> <fbc:geneProductRef fbc:geneProduct="PP_1169"/> <fbc:geneProductRef fbc:geneProduct="PP_1168"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCURtex_REV" sboTerm="SBO:0000185" id="R_GLCURtex_REV" name="D_glucuronat_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCURtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCURtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glcur_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcur_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCtex_REV" sboTerm="SBO:0000185" id="R_GLCtex_REV" name="glucose_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLCtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glc__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glc__D_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1019"/> <fbc:geneProductRef fbc:geneProduct="PP_1445"/> <fbc:geneProductRef fbc:geneProduct="PP_3570"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUDy_REV" sboTerm="SBO:0000176" id="R_GLUDy_REV" name="glutamate_dehydrogenase__NADP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUDy_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUDy"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0675"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUR_REV" sboTerm="SBO:0000176" id="R_GLUR_REV" name="glutamate_racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLUR_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUR"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR115926"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0736"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUTARt2rpp_REV" sboTerm="SBO:0000185" id="R_GLUTARt2rpp_REV" name="Glutarate_reversible_transport_via_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLUTARt2rpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glutar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glutar_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1400"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUTARtex_REV" sboTerm="SBO:0000185" id="R_GLUTARtex_REV" name="glutarate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLUTARtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glutar_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glutar_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYALDtex_REV" sboTerm="SBO:0000185" id="R_GLYALDtex_REV" name="Glyceraldehyde_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYALDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYALDtpp_REV" sboTerm="SBO:0000185" id="R_GLYALDtpp_REV" name="Glyceraldehyde_facilitated_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYALDtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYALDtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1076"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBtex_REV" sboTerm="SBO:0000185" id="R_GLYBtex_REV" name="Glycine_betaine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" 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reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCAt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCAt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> 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constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYCLTt2rpp_REV" sboTerm="SBO:0000185" id="R_GLYCLTt2rpp_REV" name="glycolate_transport_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCLTt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCLTt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCLTtex_REV" sboTerm="SBO:0000185" id="R_GLYCLTtex_REV" name="glycolate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCLTtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCLTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyclt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYCOLtex_REV" sboTerm="SBO:0000185" id="R_GLYCOLtex_REV" name="Glycol_transport_difusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLYCOLtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glycol_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glycol_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GLYCtex_REV" sboTerm="SBO:0000185" id="R_GLYCtex_REV" name="glycerol_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100179"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1019"/> <fbc:geneProductRef fbc:geneProduct="PP_1445"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCtpp_REV" sboTerm="SBO:0000185" id="R_GLYCtpp_REV" name="glycerol_transport_via_channel__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GLYCtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1076"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYD_REV" sboTerm="SBO:0000176" id="R_GLYD_REV" name="glycerate_dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GLYD_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0762"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUAtex_REV" sboTerm="SBO:0000185" id="R_GUAtex_REV" name="Guanine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_GUAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GUAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gua_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gua_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUDACtex_REV" sboTerm="SBO:0000185" id="R_GUDACtex_REV" name="Guanidinoacetate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GUDACtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gudac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gudac_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_GUDPTNtex_REV" sboTerm="SBO:0000185" id="R_GUDPTNtex_REV" name="Guanidinovaleric_acid_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_GUDPTNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gudptn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gudptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_H2CO3D2_REV" sboTerm="SBO:0000176" id="R_H2CO3D2_REV" name="carboxylic_acid_dissociation (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2CO3D2_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2CO3D2"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100483"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2co3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2O2tex_REV" sboTerm="SBO:0000185" id="R_H2O2tex_REV" name="hydrogen_peroxide_transport_via_diffusion__external_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2O2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2Otex_REV" sboTerm="SBO:0000185" id="R_H2Otex_REV" name="H2O_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2Otex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2Otex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2Otpp_REV" sboTerm="SBO:0000185" id="R_H2Otpp_REV" name="H2O_transport_via_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2Otpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2Otpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4282"/> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2Stex_REV" sboTerm="SBO:0000185" id="R_H2Stex_REV" name="h2s_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_H2Stex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2Stex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2s_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HACD9_REV" sboTerm="SBO:0000176" id="R_HACD9_REV" name="3_hydroxyacyl_CoA_dehydrogenase__2_Methylacetoacetyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HACD9_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HACD9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2maacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hmbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HAT40tex_REV" sboTerm="SBO:0000185" id="R_HAT40tex_REV" name="S_3_Hydroxyacetylthio_acid_transport_diffusion_C40__extracellularperiplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HAT40tex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3h4atb_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3h4atb_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HAT40tpp_REV" sboTerm="SBO:0000185" id="R_HAT40tpp_REV" name="S_3_Hydroxyacetylthio_acid_transport_diffusion_C40___periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HAT40tpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3h4atb_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3h4atb_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HCYStex_REV" sboTerm="SBO:0000185" id="R_HCYStex_REV" name="Homocysteine_transport__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HCYStex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hcys__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hcys__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HG2tex_REV" sboTerm="SBO:0000185" id="R_HG2tex_REV" name="mercury__Hg2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HG2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HG2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HGENTIStex_REV" sboTerm="SBO:0000185" id="R_HGENTIStex_REV" name="Homogentisate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_HGENTIStex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hgentis_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hgentis_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HISt2rpp_REV" sboTerm="SBO:0000185" id="R_HISt2rpp_REV" name="L_histidine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HISt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HOMtex_REV" sboTerm="SBO:0000185" id="R_HOMtex_REV" name="L_homoserine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HOMtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HOMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hom__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hom__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_HSERTA_REV" sboTerm="SBO:0000176" id="R_HSERTA_REV" name="homoserine_O_trans_acetylase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HSERTA_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HSERTA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_achms_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5097"/> <fbc:geneProductRef fbc:geneProduct="PP_5098"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HYXNtex_REV" sboTerm="SBO:0000185" id="R_HYXNtex_REV" name="Hypoxanthine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_HYXNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HYXNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_hxan_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hxan_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_Htex_REV" sboTerm="SBO:0000185" id="R_Htex_REV" name="proton_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Htex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Htex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96768"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ICITt_kt_REV" sboTerm="SBO:0000185" id="R_ICITt_kt_REV" name="isocitrate_transport_in_via_proton_symport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ICITt_kt_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ICITt_kt"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2057"/> <fbc:geneProductRef fbc:geneProduct="PP_0147"/> <fbc:geneProductRef fbc:geneProduct="PP_2703"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILEDHr_REV" sboTerm="SBO:0000176" id="R_ILEDHr_REV" name="Valine_dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILEDHr_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEDHr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4617"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILEt2rpp_REV" sboTerm="SBO:0000185" id="R_ILEt2rpp_REV" name="L_isoleucine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILEt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILEtex_REV" sboTerm="SBO:0000185" id="R_ILEtex_REV" name="L_isoleucine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ILEtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ile__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ile__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_IMPC_REV" sboTerm="SBO:0000176" id="R_IMPC_REV" name="IMP_cyclohydrolase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IMPC_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IMPC"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100829"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fprica_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4822"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IND3ACtex_REV" sboTerm="SBO:0000185" id="R_IND3ACtex_REV" name="indole_3_acetate_transport__exterior_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_IND3ACtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ind3ac_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ind3ac_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_INDOLEtex_REV" sboTerm="SBO:0000185" id="R_INDOLEtex_REV" name="Indole_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_INDOLEtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/INDOLEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_indole_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_INStex_REV" sboTerm="SBO:0000185" id="R_INStex_REV" name="inosine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_INStex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/INStex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ins_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ins_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPPMIa_REV" sboTerm="SBO:0000176" id="R_IPPMIa_REV" name="3_isopropylmalate_dehydratase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IPPMIa_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IPPMIa"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ippm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3c2hmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1985"/> <fbc:geneProductRef fbc:geneProduct="PP_1986"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPPMIb_REV" sboTerm="SBO:0000176" id="R_IPPMIb_REV" name="2_isopropylmalate_hydratase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_IPPMIb_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IPPMIb"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3c3hmp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ippm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1985"/> <fbc:geneProductRef fbc:geneProduct="PP_1986"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KARA1_REV" sboTerm="SBO:0000176" id="R_KARA1_REV" name="ketol_acid_reductoisomerase__2_3_dihydroxy_3_methylbutanoate_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_KARA1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/KARA1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_alac__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_23dhmb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4678"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KARA2_REV" sboTerm="SBO:0000176" id="R_KARA2_REV" name="ketol_acid_reductoisomerase__2_Acetolactate_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_KARA2_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/KARA2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_23dhmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ahbut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4678"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_Ktex_REV" sboTerm="SBO:0000185" id="R_Ktex_REV" name="potassium_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Ktex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Ktex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_k_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_LEUDHr_REV" sboTerm="SBO:0000176" id="R_LEUDHr_REV" name="leucine_dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_LEUDHr_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4617"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUt2rpp_REV" sboTerm="SBO:0000185" id="R_LEUt2rpp_REV" name="L_leucine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LEUt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LEUt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUtex_REV" sboTerm="SBO:0000185" id="R_LEUtex_REV" name="L_leucine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LEUtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LEUtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_leu__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_leu__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_LYSRC_REV" sboTerm="SBO:0000176" id="R_LYSRC_REV" name="lysine_racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_LYSRC_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LYSRC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_L_LACt2rpp_REV" sboTerm="SBO:0000185" id="R_L_LACt2rpp_REV" name="L_lactate_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_L_LACt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/L_LACt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lac__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_L_LACtex_REV" sboTerm="SBO:0000185" id="R_L_LACtex_REV" name="L_lactate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_L_LACtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/L_LACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_lac__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lac__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MALDtex_REV" sboTerm="SBO:0000185" id="R_MALDtex_REV" name="D_Malate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mal__D_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MALEI_REV" sboTerm="SBO:0000176" id="R_MALEI_REV" name="Maleate_cis_trans_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALEI_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALEI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_male_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3942"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MALtex_REV" sboTerm="SBO:0000185" id="R_MALtex_REV" name="Malate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MALtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mal__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mal__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MANtex_REV" sboTerm="SBO:0000185" id="R_MANtex_REV" name="D_mannose_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MANtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MANtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_man_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_man_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MCSNtex_REV" sboTerm="SBO:0000185" id="R_MCSNtex_REV" name="cytosine_transport_in_via_diffusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_MCSNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5mcsn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5mcsn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MDH_REV" sboTerm="SBO:0000176" id="R_MDH_REV" name="malate_dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MDH_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MDH"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105018"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0654"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MEOHtex_REV" sboTerm="SBO:0000185" id="R_MEOHtex_REV" name="Methanol_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MEOHtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MEOHtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MEOHtrpp_REV" sboTerm="SBO:0000185" id="R_MEOHtrpp_REV" name="Methanol_reversible_transport_via_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MEOHtrpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MEOHtrpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METtex_REV" sboTerm="SBO:0000185" id="R_METtex_REV" name="L_methionine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_METtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_met__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_met__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MG2tex_REV" sboTerm="SBO:0000185" id="R_MG2tex_REV" name="magnesium__Mg2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MG2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MG2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mg2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mg2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MMETtex_REV" sboTerm="SBO:0000185" id="R_MMETtex_REV" name="S_methyl_L_methionine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MMETtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MMETtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mmet_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mmet_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MNtex_REV" sboTerm="SBO:0000185" id="R_MNtex_REV" name="Manganese__Mn2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mn2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mn2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MOBDtex_REV" sboTerm="SBO:0000185" id="R_MOBDtex_REV" name="molybdate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MOBDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MOBDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_mobd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mobd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MSULR_REV" sboTerm="SBO:0000176" id="R_MSULR_REV" name="Metanesulfonate_reductase__NADPH2_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MSULR_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MSULR"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_mso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ch4s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="3" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MTHFC_REV" sboTerm="SBO:0000176" id="R_MTHFC_REV" name="methenyltetrahydrofolate_cyclohydrolase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MTHFC_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MTHFC"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2265"/> <fbc:geneProductRef fbc:geneProduct="PP_1945"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTHFD_REV" sboTerm="SBO:0000176" id="R_MTHFD_REV" name="methylenetetrahydrofolate_dehydrogenase__NADP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MTHFD_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MTHFD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1945"/> <fbc:geneProductRef fbc:geneProduct="PP_2265"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTRI_REV" sboTerm="SBO:0000176" id="R_MTRI_REV" name="5_methylthioribose_1_phosphate_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_MTRI_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MTRI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5mdru1p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5mdr1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1766"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_M_XYLtpp_REV" sboTerm="SBO:0000185" id="R_M_XYLtpp_REV" name="passive_diffusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_M_XYLtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/M_XYLtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_M_Xylt1_REV" sboTerm="SBO:0000185" id="R_M_Xylt1_REV" name="m_xylene__outer_membrane_porin_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_M_Xylt1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/M_Xylt1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NACt1pp_REV" sboTerm="SBO:0000185" id="R_NACt1pp_REV" name="Nicotinic_acid_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NACt1pp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NACt1pp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3940"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NACtex_REV" sboTerm="SBO:0000185" id="R_NACtex_REV" name="Nicotinic_acid_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NACtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NACtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3939"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAt3_1pp_REV" sboTerm="SBO:0000185" id="R_NAt3_1pp_REV" name="sodium_proton_antiporter__HNA_is_11___periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_NAt3_1pp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1587"/> <fbc:geneProductRef fbc:geneProduct="PP_4974"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NAtex_REV" sboTerm="SBO:0000185" id="R_NAtex_REV" name="sodium_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NCBMPTStex_REV" sboTerm="SBO:0000185" id="R_NCBMPTStex_REV" name="Carbamoylputrescine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_NCBMPTStex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_Ncbmpts_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Ncbmpts_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NDPK1_REV" sboTerm="SBO:0000176" id="R_NDPK1_REV" name="nucleoside_diphosphate_kinase__ATPGDP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK2_REV" sboTerm="SBO:0000176" id="R_NDPK2_REV" name="nucleoside_diphosphate_kinase__ATPUDP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK2_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK3_REV" sboTerm="SBO:0000176" id="R_NDPK3_REV" name="nucleoside_diphosphate_kinase__ATPCDP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK3_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK4_REV" sboTerm="SBO:0000176" id="R_NDPK4_REV" name="nucleoside_diphosphate_kinase__ATPdTDP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK4_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dttp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK5_REV" sboTerm="SBO:0000176" id="R_NDPK5_REV" name="nucleoside_diphosphate_kinase__ATPdGDP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK5_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgtp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dgdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK6_REV" sboTerm="SBO:0000176" id="R_NDPK6_REV" name="nucleoside_diphosphate_kinase__ATPdUDP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK6_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dutp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK7_REV" sboTerm="SBO:0000176" id="R_NDPK7_REV" name="nucleoside_diphosphate_kinase__ATPdCDP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK7_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dctp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NDPK8_REV" sboTerm="SBO:0000176" id="R_NDPK8_REV" name="nucleoside_diphosphate_kinase__ATPdADP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NDPK8_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NDPK8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_datp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0849"/> <fbc:geneProductRef fbc:geneProduct="PP_1506"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NH4tex_REV" sboTerm="SBO:0000185" id="R_NH4tex_REV" name="ammonia_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NH4tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NH4tpp_REV" sboTerm="SBO:0000185" id="R_NH4tpp_REV" name="ammonia_reversible_transport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NH4tpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5233"/> <fbc:geneProductRef fbc:geneProduct="PP_2106"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NI2tex_REV" sboTerm="SBO:0000185" id="R_NI2tex_REV" name="nickel_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NI2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NI2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ni2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ni2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NNATr_REV" sboTerm="SBO:0000176" id="R_NNATr_REV" name="nicotinate_nucleotide_adenylyltransferase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NNATr_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NNATr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dnad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4810"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NO2t2rpp_REV" sboTerm="SBO:0000185" id="R_NO2t2rpp_REV" name="nitrite_transport_in_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NO2t2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO2t2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_no2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1156"/> <fbc:geneProductRef fbc:geneProduct="PP_2092"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NO2tex_REV" sboTerm="SBO:0000185" id="R_NO2tex_REV" name="nitrite_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NO2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NO3tex_REV" sboTerm="SBO:0000185" id="R_NO3tex_REV" name="nitrate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NO3tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO3tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NOtex_REV" sboTerm="SBO:0000185" id="R_NOtex_REV" name="nitric_oxide_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NOtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NOtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_NOtpp_REV" sboTerm="SBO:0000185" id="R_NOtpp_REV" name="NO_transport__diffusion_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_NOtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NOtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_no_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_no_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_O2tex_REV" sboTerm="SBO:0000185" id="R_O2tex_REV" name="oxygen_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_O2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_O2tpp_REV" sboTerm="SBO:0000185" id="R_O2tpp_REV" name="o2_transport_via_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_O2tpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OAAtex_REV" sboTerm="SBO:0000185" id="R_OAAtex_REV" name="oxaloacetate_transport__extracellular (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OAAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OAAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_oaa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oaa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OARGtex_REV" sboTerm="SBO:0000185" id="R_OARGtex_REV" name="oxo_arginine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OARGtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_5g2oxpt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5g2oxpt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OHPBAT_REV" sboTerm="SBO:0000176" id="R_OHPBAT_REV" name="O_Phospho_4_hydroxy_L_threonine2_oxoglutarate_aminotransferase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OHPBAT_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OHPBAT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phthr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ohpb_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1768"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OMAIS_REV" sboTerm="SBO:0000176" id="R_OMAIS_REV" name="4_oxalmesaconate_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OMAIS_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMAIS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_omaenol_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_omaketo_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2513"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORNtex_REV" sboTerm="SBO:0000185" id="R_ORNtex_REV" name="ornithine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ORNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ORNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OROTtex_REV" sboTerm="SBO:0000185" id="R_OROTtex_REV" name="Orotate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OROTtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OROTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orot_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orot_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ORPT_REV" sboTerm="SBO:0000176" id="R_ORPT_REV" name="orotate_phosphoribosyltransferase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_ORPT_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ORPT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_orot_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_orot5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5291"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OXAtpp_REV" sboTerm="SBO:0000185" id="R_OXAtpp_REV" name="OxalateH_antiporter__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_OXAtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_oxa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxa_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OXFOtex_REV" sboTerm="SBO:0000185" id="R_OXFOtex_REV" name="OxalateFormate_antiporter__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OXFOtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OXFOtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_oxa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oxa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_OXPTNDH_REV" sboTerm="SBO:0000176" id="R_OXPTNDH_REV" name="glutarate_semialdehydeNAD_oxidoreductase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_OXPTNDH_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OXPTNDH"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glutar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxptn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_O_Xylt1_REV" sboTerm="SBO:0000185" id="R_O_Xylt1_REV" name="o_xylene__outer_membrane_porin_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_O_Xylt1_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_o_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_o_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PACALDtex_REV" sboTerm="SBO:0000185" id="R_PACALDtex_REV" name="phenethylacetaldehyde_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PACALDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PACALDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pacald_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pacald_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PACt3_REV" sboTerm="SBO:0000185" id="R_PACt3_REV" name="Phenylacetic_acid_transport_via_sodium_symport_MSF (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PACt3_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PACt3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pac_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3272"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PALDO2_REV" sboTerm="SBO:0000176" id="R_PALDO2_REV" name="Phosphonoaldehyde_dehydrogenase___NADH_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PALDO2_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phnac_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pald_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PB2tex_REV" sboTerm="SBO:0000185" id="R_PB2tex_REV" name="Lead___Pb2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PB2tex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pb2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pb2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PEALtex_REV" sboTerm="SBO:0000185" id="R_PEALtex_REV" name="Phenylethanol_transport_difusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PEALtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PEAMNtex_REV" sboTerm="SBO:0000185" id="R_PEAMNtex_REV" name="phenethylamine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PEAMNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PEAMNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_peamn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PERD_REV" sboTerm="SBO:0000176" id="R_PERD_REV" name="Erythronate_4_phosphate__4per__dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PERD_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PERD"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ohpb_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4per_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2117"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGAMT_REV" sboTerm="SBO:0000176" id="R_PGAMT_REV" name="phosphoglucosamine_mutase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGAMT_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGAMT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_gam6p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gam1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4716"/> <fbc:geneProductRef fbc:geneProduct="PP_5288"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGI_REV" sboTerm="SBO:0000176" id="R_PGI_REV" name="glucose_6_phosphate_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGI_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102535"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1808"/> <fbc:geneProductRef fbc:geneProduct="PP_4701"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGK_REV" sboTerm="SBO:0000176" id="R_PGK_REV" name="phosphoglycerate_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGK_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGK"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94821"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3pg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4963"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGM_REV" sboTerm="SBO:0000176" id="R_PGM_REV" name="phosphoglycerate_mutase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PGM_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGM"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97765"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_3pg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2pg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5056"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEt2rpp_REV" sboTerm="SBO:0000185" id="R_PHEt2rpp_REV" name="L_phenylalanine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PHEt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> <fbc:geneProductRef fbc:geneProduct="PP_4495"/> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHEtex_REV" sboTerm="SBO:0000185" id="R_PHEtex_REV" name="L_phenylalanine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PHEtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phe__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phe__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PHPYRtex_REV" sboTerm="SBO:0000185" id="R_PHPYRtex_REV" name="Phenyl_pyruvate_transport_ex____pp (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHPYRtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phpyr_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phpyr_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PHPYRtpp_REV" sboTerm="SBO:0000185" id="R_PHPYRtpp_REV" name="phenylpyruvate_transport_in_via_proton_symport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHPYRtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PIt2rpp_REV" sboTerm="SBO:0000185" id="R_PIt2rpp_REV" name="phosphate_reversible_transport_via_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PIt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PIt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1373"/> <fbc:geneProductRef fbc:geneProduct="PP_4103"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PItex_REV" sboTerm="SBO:0000185" id="R_PItex_REV" name="phosphate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PItex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PItex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0037"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PNTOtex_REV" sboTerm="SBO:0000185" id="R_PNTOtex_REV" name="Pantothenate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PNTOtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PNTOtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pnto__R_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pnto__R_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPAtex_REV" sboTerm="SBO:0000185" id="R_PPAtex_REV" name="propionate_transport_via_diffusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PPAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPAtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103094"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ppa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppa_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPItex_REV" sboTerm="SBO:0000185" id="R_PPItex_REV" name="Diphosphate_transporter__periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPItex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ppi_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0037"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPK2r_REV" sboTerm="SBO:0000176" id="R_PPK2r_REV" name="polyphosphate_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPK2r_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPK50r_REV" sboTerm="SBO:0000176" id="R_PPK50r_REV" name="polyphosphate_kinase__PolyP_synthesis_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPK50r_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="47" constant="true"/> <speciesReference species="M_ppi50_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="47" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPKr_REV" sboTerm="SBO:0000176" id="R_PPKr_REV" name="polyphosphate_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPKr_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PQQH2S_REV" sboTerm="SBO:0000176" id="R_PQQH2S_REV" name="pyrroloquinoline_quinone_synthase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PQQH2S_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pqqh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1pqq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="3" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0378"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PQQH2tpp_REV" sboTerm="SBO:0000185" id="R_PQQH2tpp_REV" name="pyrrolo_quinoline_quinone_transport_inner_membrane (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PQQH2tpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pqqh2_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PQQtpp_REV" sboTerm="SBO:0000185" id="R_PQQtpp_REV" name="pyrrolo_quinoline_quinone_transport_inner_membrane (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PQQtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pqq_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PRMICI_REV" sboTerm="SBO:0000176" id="R_PRMICI_REV" name="1__5_phosphoribosyl__5__5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRMICI_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRMICI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_prlp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_prfp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0292"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PRPPS_REV" sboTerm="SBO:0000176" id="R_PRPPS_REV" name="phosphoribosylpyrophosphate_synthetase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PRPPS_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRPPS"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103215"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTAr_REV" sboTerm="SBO:0000176" id="R_PTAr_REV" name="phosphotransacetylase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTAr_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTAr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_actp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0774"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTAtex_REV" sboTerm="SBO:0000185" id="R_PTAtex_REV" name="pentanoate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTAtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103320"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pta_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PTRCtex_REV" sboTerm="SBO:0000185" id="R_PTRCtex_REV" name="putrescine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PTRCtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ptrc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ptrc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYDAMtex_REV" sboTerm="SBO:0000185" id="R_PYDAMtex_REV" name="pyridoxamine_transport_via_diffusion__extracellular_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYDAMtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYDAMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pydam_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pydam_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYNP2r_REV" sboTerm="SBO:0000176" id="R_PYNP2r_REV" name="pyrimidine_nucleoside_phosphorylase__uracil_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYNP2r_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYNP2r"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYRt2rpp_REV" sboTerm="SBO:0000185" id="R_PYRt2rpp_REV" name="pyruvate_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYRt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYRt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PYRtex_REV" sboTerm="SBO:0000185" id="R_PYRtex_REV" name="pyruvate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_PYRtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PYRtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pyr_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pyr_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_P_Xylt1_REV" sboTerm="SBO:0000185" id="R_P_Xylt1_REV" name="p_xylene__outer_membrane_porin_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_P_Xylt1_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/P_Xylt1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_QUINtex_REV" sboTerm="SBO:0000185" id="R_QUINtex_REV" name="Quinate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_QUINtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3570"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUINtpp_REV" sboTerm="SBO:0000185" id="R_QUINtpp_REV" name="Quinateproton_symport_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_QUINtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/QUINtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2553"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH10_REV" sboTerm="SBO:0000176" id="R_RECOAH10_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxynonanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH10_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH11_REV" sboTerm="SBO:0000176" id="R_RECOAH11_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenyldecanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH11_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdca2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH12_REV" sboTerm="SBO:0000176" id="R_RECOAH12_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylnonanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH12_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnona2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH13_REV" sboTerm="SBO:0000176" id="R_RECOAH13_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenyloctanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH13_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pocta2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH14_REV" sboTerm="SBO:0000176" id="R_RECOAH14_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylheptanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH14_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_php2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH15_REV" sboTerm="SBO:0000176" id="R_RECOAH15_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylhexanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH15_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxa2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH16_REV" sboTerm="SBO:0000176" id="R_RECOAH16_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylpentanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH16_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppt2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH17_REV" sboTerm="SBO:0000176" id="R_RECOAH17_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyphenylbutanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH17_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH19_REV" sboTerm="SBO:0000176" id="R_RECOAH19_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy_6_acetylthiohexanoyl_CoA (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH19_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_6ath2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH2_REV" sboTerm="SBO:0000176" id="R_RECOAH2_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyhexanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH2_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH20_REV" sboTerm="SBO:0000176" id="R_RECOAH20_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy_4_acetylthiobutanoyl_CoA (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH20_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4atb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h4atbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH21_REV" sboTerm="SBO:0000176" id="R_RECOAH21_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy__7Z__tetradecenyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH21_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tde2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH22_REV" sboTerm="SBO:0000176" id="R_RECOAH22_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy__5Z__dodedecenyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH22_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH23_REV" sboTerm="SBO:0000176" id="R_RECOAH23_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy__5Z__tetradecenyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH23_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5_2_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH24_REV" sboTerm="SBO:0000176" id="R_RECOAH24_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxy_5Z_8Z__tetradecedienyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH24_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td58_2_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH25_REV" sboTerm="SBO:0000176" id="R_RECOAH25_REV" name="3_hydroxyacyl_Coa_dehydratase___R__3_hydroxy__6Z__dodedecenyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH25_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dd6_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH26_REV" sboTerm="SBO:0000176" id="R_RECOAH26_REV" name="3_hydroxyacyl_Coa_dehydratase___R__3_hydroxy__4Z__decenyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH26_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dec4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH3_REV" sboTerm="SBO:0000176" id="R_RECOAH3_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyoctanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH3_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH4_REV" sboTerm="SBO:0000176" id="R_RECOAH4_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxydecanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH4_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH5_REV" sboTerm="SBO:0000176" id="R_RECOAH5_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxydodecanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH5_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH6_REV" sboTerm="SBO:0000176" id="R_RECOAH6_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxytetradecanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH6_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH7_REV" sboTerm="SBO:0000176" id="R_RECOAH7_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyhexadecanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH7_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH8_REV" sboTerm="SBO:0000176" id="R_RECOAH8_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxypentanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH8_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pt2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4817"/> <fbc:geneProductRef fbc:geneProduct="PP_4552"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RECOAH9_REV" sboTerm="SBO:0000176" id="R_RECOAH9_REV" name="3_hydroxyacyl_Coa_dehydratase___3R__3_hydroxyheptanoyl_CoA_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_RECOAH9_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hp2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> 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xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SERtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SERtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ser__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ser__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SKMtex_REV" sboTerm="SBO:0000185" id="R_SKMtex_REV" name="shikimate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SKMtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SKMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_skm_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_skm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SO2tex_REV" sboTerm="SBO:0000185" id="R_SO2tex_REV" name="SO2_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SO2tpp_REV" sboTerm="SBO:0000185" id="R_SO2tpp_REV" name="SO2_transport_via_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO2tpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO2tpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SO3tex_REV" sboTerm="SBO:0000185" id="R_SO3tex_REV" name="sulfite_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO3tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO3tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so3_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SO4tex_REV" sboTerm="SBO:0000185" id="R_SO4tex_REV" name="sulfate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SO4tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SO4tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_so4_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_so4_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SPMDtex_REV" sboTerm="SBO:0000185" id="R_SPMDtex_REV" name="spermidine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SPMDtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SPMDtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_spmd_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_spmd_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_SUCCtex_REV" sboTerm="SBO:0000185" id="R_SUCCtex_REV" name="succinate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_SUCCtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SUCCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_succ_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_succ_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_T2DECAI_REV" sboTerm="SBO:0000176" id="R_T2DECAI_REV" name="trans_2_decenoyl_ACP_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_T2DECAI_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/T2DECAI"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104659"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_cdec3eACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tdec2eACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4174"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_T4HCINNMtex_REV" sboTerm="SBO:0000185" id="R_T4HCINNMtex_REV" name="T4HCINNM_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_T4HCINNMtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/T4HCINNMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_T4hcinnm_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_T4hcinnm_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_T4HCINNMtpp_REV" sboTerm="SBO:0000185" id="R_T4HCINNMtpp_REV" name="T4HCINNM_transport_via_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_T4HCINNMtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/T4HCINNMtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_T4hcinnm_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_T4hcinnm_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TALA_REV" sboTerm="SBO:0000176" id="R_TALA_REV" name="transaldolase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TALA_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TALA"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97011"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_s7p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2168"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TCYNTtex_REV" sboTerm="SBO:0000185" id="R_TCYNTtex_REV" name="Thiocyanate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TCYNTtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TCYNTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TCYNTtpp_REV" sboTerm="SBO:0000185" id="R_TCYNTtpp_REV" name="Thiocyanate_transport_via_diffusion__periplasm_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_TCYNTtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_s0001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRtex_REV" sboTerm="SBO:0000185" id="R_THRtex_REV" name="L_threonine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THRtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THRtex"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95025"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_thr__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_THYMtex_REV" sboTerm="SBO:0000185" id="R_THYMtex_REV" name="thymine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_THYMtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THYMtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_thym_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_thym_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TOLtex_REV" sboTerm="SBO:0000185" id="R_TOLtex_REV" name="toluene__outer_membrane_porin_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TOLtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TOLtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="pWW0_127"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TPI_REV" sboTerm="SBO:0000176" id="R_TPI_REV" name="triose_phosphate_isomerase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TPI_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TPI"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4715"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRPt2rpp_REV" sboTerm="SBO:0000185" id="R_TRPt2rpp_REV" name="L_tryptophan_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRPt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRPt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRPtex_REV" sboTerm="SBO:0000185" id="R_TRPtex_REV" name="L_tryptophan_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TRPtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TRPtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_trp__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_trp__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TSULtex_REV" sboTerm="SBO:0000185" id="R_TSULtex_REV" name="thiosulfate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TSULtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TSULtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tsul_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tsul_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TTRCYCtex_REV" sboTerm="SBO:0000185" id="R_TTRCYCtex_REV" name="Tetracycline_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TTRCYCtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TTRCYCtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TUNGStex_REV" sboTerm="SBO:0000185" id="R_TUNGStex_REV" name="tungstate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TUNGStex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TUNGStex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tungs_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tungs_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_TYRt2rpp_REV" sboTerm="SBO:0000185" id="R_TYRt2rpp_REV" name="L_tyrosine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TYRt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TYRt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4492"/> <fbc:geneProductRef fbc:geneProduct="PP_4495"/> <fbc:geneProductRef fbc:geneProduct="PP_0927"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TYRtex_REV" sboTerm="SBO:0000185" id="R_TYRtex_REV" name="L_tyrosine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_TYRtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TYRtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_tyr__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tyr__L_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3630"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAGAAT2_REV" sboTerm="SBO:0000176" id="R_UAGAAT2_REV" name="UDP_N_acetylglucosamine_acyltransferase__hydroxydecanoyl_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UAGAAT2_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAGAAT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_u3dcaga_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hdecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1915"/> <fbc:geneProductRef fbc:geneProduct="PP_1603"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UHBZ1t_pp__REV" sboTerm="SBO:0000185" id="R_UHBZ1t_pp__REV" name="4_hydroxy_benzoate_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UHBZ1t_pp__REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbz_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UMPK_REV" sboTerm="SBO:0000176" id="R_UMPK_REV" name="UMP_kinase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UMPK_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UMPK"/> <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105119"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1771"/> <fbc:geneProductRef fbc:geneProduct="PP_1593"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URAtex_REV" sboTerm="SBO:0000185" id="R_URAtex_REV" name="uracil_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_ura_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ura_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_UREAtex_REV" sboTerm="SBO:0000185" id="R_UREAtex_REV" name="Urea_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UREAtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UREAtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_urea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_urea_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_UREAtpp_REV" sboTerm="SBO:0000185" id="R_UREAtpp_REV" name="Urea_transport_via_facilitate_diffusion__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_UREAtpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UREAtpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_urea_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1076"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URIDK2r_REV" sboTerm="SBO:0000176" id="R_URIDK2r_REV" name="uridylate_kinase__dUMP_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URIDK2r_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URIDK2r"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1593"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URIt2rpp_REV" sboTerm="SBO:0000185" id="R_URIt2rpp_REV" name="uridine_transport_in_via_proton_symport__reversible__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_URIt2rpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_URItex_REV" sboTerm="SBO:0000185" id="R_URItex_REV" name="uridine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_URItex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URItex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_uri_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_uri_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4291"/> <fbc:geneProductRef fbc:geneProduct="PP_4293"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALDHr_REV" sboTerm="SBO:0000176" id="R_VALDHr_REV" name="Valine_dehydrogenase (reversible)" reversible="false" 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stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4617"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALt2rpp_REV" sboTerm="SBO:0000185" id="R_VALt2rpp_REV" name="L_valine_reversible_transport_via_proton_symport__periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALt2rpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALt2rpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALtex_REV" sboTerm="SBO:0000185" id="R_VALtex_REV" name="L_valine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VALtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_val__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_val__L_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_VANKpp_REV" sboTerm="SBO:0000185" id="R_VANKpp_REV" name="Vanillateproton_symport_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VANKpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VANKpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanlt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vanlt_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3740"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VANLNtex_REV" sboTerm="SBO:0000185" id="R_VANLNtex_REV" name="Vanillin_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VANLNtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VANLNtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vanln_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_vanln_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3739"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VANLTtex_REV" sboTerm="SBO:0000185" id="R_VANLTtex_REV" name="Vanillate_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VANLTtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VANLTtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_vanlt_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_vanlt_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3739"/> <fbc:geneProductRef fbc:geneProduct="PP_1383"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VNLNpp_REV" sboTerm="SBO:0000185" id="R_VNLNpp_REV" name="Vanillinproton_symport_transport (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_VNLNpp_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VNLNpp"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanln_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vanln_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3740"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_XANtex_REV" sboTerm="SBO:0000185" id="R_XANtex_REV" name="xanthine_transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_XANtex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/XANtex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_xan_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_xan_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_Zn2tex_REV" sboTerm="SBO:0000185" id="R_Zn2tex_REV" name="zinc__Zn2__transport_via_diffusion__extracellular_to_periplasm_ (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_Zn2tex_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Zn2tex"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_zn2_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_sink_PHAg_REV" sboTerm="SBO:0000632" id="R_sink_PHAg_REV" name="PHA_preexistent (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_sink_PHAg_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_sink_pqqA_kt_c__REV" sboTerm="SBO:0000632" id="R_sink_pqqA_kt_c__REV" name="sink_pqqA_kt (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_sink_pqqA_kt_c__REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pqqA_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> </reaction> <reaction metaid="R_G5DHx_REV" sboTerm="SBO:0000176" id="R_G5DHx_REV" name="Glutamate-5-semialdehyde dehydrogenase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#R_G5DHx_REV"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G5DHx"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4811"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HPTNtex_REV" sboTerm="SBO:0000185" id="R_4HPTNtex_REV" name="4_Hydroxypentanoate transport via diffusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4HPTNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4hptn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4OXPTNtex_REV" sboTerm="SBO:0000185" id="R_4OXPTNtex_REV" name="4_Oxopentanoate transport via diffusion (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4OXPTNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_4oxptn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_4POPCOAM2_REV" sboTerm="SBO:0000176" id="R_4POPCOAM2_REV" name="4_(Phosphooxy pentanoyl_CoA mutase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_4POPCOAM2_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_2ptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2793"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACMTSOXINtex_REV" sboTerm="SBO:0000176" id="R_ACMTSOXINtex_REV" name="N_Acetylmethionine_sulfoximine transport periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACMTSOXINtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acmtsoxin_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acmtsoxin_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACMTSOXINtpp_REV" sboTerm="SBO:0000185" id="R_ACMTSOXINtpp_REV" name="N_Acetylmethionine_sulfoximine transport citoplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACMTSOXINtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acmtsoxin_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acmtsoxin_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACPHPHITRNtex_REV" sboTerm="SBO:0000185" id="R_ACPHPHITRNtex_REV" name="N_Acetylphosphinothricin transport periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACPHPHITRNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acpptrn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acpptrn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACPHPHITRNtpp_REV" sboTerm="SBO:0000185" id="R_ACPHPHITRNtpp_REV" name="N_Acetylphosphinothricin transport citoplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ACPHPHITRNtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_acpptrn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acpptrn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ARGR_REV" sboTerm="SBO:0000176" id="R_ARGR_REV" name="arginine racemase (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_ARGR_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_arg__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_D2ONEtex_REV" sboTerm="SBO:0000185" id="R_D2ONEtex_REV" name="D2ONE transport via diffusion extracellular to periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D2ONEtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d2one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d2one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D2ONEtpp_REV" sboTerm="SBO:0000185" id="R_D2ONEtpp_REV" name="D2ONE transport via diffusion periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D2ONEtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d2one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d2one_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D3ONEtex_REV" sboTerm="SBO:0000185" id="R_D3ONEtex_REV" name="D3ONE transport via diffusion extracellular to periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D3ONEtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d3one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d3one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D3ONEtpp_REV" sboTerm="SBO:0000185" id="R_D3ONEtpp_REV" name="D3ONE transport via diffusion periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D3ONEtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d3one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d3one_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D4ONEtex_REV" sboTerm="SBO:0000185" id="R_D4ONEtex_REV" name="D4ONE transport via diffusion extracellular to periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D4ONEtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d4one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d4one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_D4ONEtpp_REV" sboTerm="SBO:0000185" id="R_D4ONEtpp_REV" name="D4ONE transport via diffusion periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_D4ONEtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_d4one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_d4one_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_4hptn_e_REV" sboTerm="SBO:0000627" id="R_EX_4hptn_e_REV" name="4_Hydroxypentanoate exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_4hptn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_4hptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_4oxptn_e_REV" sboTerm="SBO:0000627" id="R_EX_4oxptn_e_REV" name="4_Oxopentanoate exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB1N0"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_4oxptn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_acmtsoxin_e_REV" sboTerm="SBO:0000627" id="R_EX_acmtsoxin_e_REV" name="N_Acetylmethionine_sulfoximine exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_acmtsoxin_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acmtsoxin_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_acpptrn_e_REV" sboTerm="SBO:0000627" id="R_EX_acpptrn_e_REV" name="N_Acetylphosphinothricin exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_acpptrn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_acpptrn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_d2one_e_REV" sboTerm="SBO:0000627" id="R_EX_d2one_e_REV" name="2_Decanone exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_d2one_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_d2one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_d3one_e_REV" sboTerm="SBO:0000627" id="R_EX_d3one_e_REV" name="3_Decanone exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_d3one_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_d3one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_d4one_e_REV" sboTerm="SBO:0000627" id="R_EX_d4one_e_REV" name="4_Decanone exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_d4one_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_d4one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_mtsoxin_e_REV" sboTerm="SBO:0000627" id="R_EX_mtsoxin_e_REV" name="Methionine_sulfoximine exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_mtsoxin_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_mtsoxin_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_n2one_e_REV" sboTerm="SBO:0000627" id="R_EX_n2one_e_REV" name="2_Nonanone exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_n2one_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_n2one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_pptrn_e_REV" sboTerm="SBO:0000627" id="R_EX_pptrn_e_REV" name="L_Phosphinothricin exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_pptrn_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_pptrn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_EX_und2one_e_REV" sboTerm="SBO:0000627" id="R_EX_und2one_e_REV" name="2_Undecanone exchange (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_EX_und2one_e_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference species="M_und2one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_MTSOXINtex_REV" sboTerm="SBO:0000185" id="R_MTSOXINtex_REV" name="Methionine_sulfoximine transport periplasm 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<annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_N2ONEtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_n2one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_n2one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_N2ONEtpp_REV" sboTerm="SBO:0000185" id="R_N2ONEtpp_REV" name="N2ONE transport via diffusion periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PHER_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_phe__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPTRNtex_REV" sboTerm="SBO:0000185" id="R_PPTRNtex_REV" name="L_Phosphinothricin transport periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPTRNtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pptrn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pptrn_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPTRNtpp_REV" sboTerm="SBO:0000185" id="R_PPTRNtpp_REV" name="L_Phosphinothricin transport citoplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_PPTRNtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_pptrn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pptrn_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_UND2ONEtex_REV" sboTerm="SBO:0000185" id="R_UND2ONEtex_REV" name="UND2ONE transport via diffusion extracellular to periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UND2ONEtex_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_und2one_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_und2one_e" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_UND2ONEtpp_REV" sboTerm="SBO:0000185" id="R_UND2ONEtpp_REV" name="UND2ONE transport via diffusion periplasm (reversible)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_R_UND2ONEtpp_REV"> <bqbiol:is> <rdf:Bag/> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="M_und2one_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_und2one_p" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_1P2CBXLRNo1" sboTerm="SBO:0000176" id="R_1P2CBXLRNo1" name="Delta1_piperideine_2_carboxylate_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1p2cbxl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX6" stoichiometry="9.058e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3591"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_1PPDCRcNo1" sboTerm="SBO:0000176" id="R_1PPDCRcNo1" name="L_PipecolateNADP_2_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1pipdn2c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX6" stoichiometry="9.058e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Lpipecol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3591"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_1PY4h3cAHNo1" sboTerm="SBO:0000176" id="R_1PY4h3cAHNo1" name="1_Pyrroline_4_hydroxy_2_carboxylate_aminohydrolase__decyclizing_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1py4h3c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NF4" stoichiometry="0.00023343" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25dop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1257"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_24DECOARNo1" sboTerm="SBO:0000176" id="R_24DECOARNo1" name="2_4_dienoyl_CoA_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dec4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LC7" stoichiometry="1.7361e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2008"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2DHGLCKNo1" sboTerm="SBO:0000176" id="R_2DHGLCKNo1" name="dehydrogluconokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HH9" stoichiometry="8.4175e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6p2dhglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3378"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_34HPPORNo1" sboTerm="SBO:0000176" id="R_34HPPORNo1" name="4_Hydroxyphenylpyruvateoxygen_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HC7" stoichiometry="4.085e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hgentis_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3433"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3AIBT2No1" sboTerm="SBO:0000176" id="R_3AIBT2No1" name="L_3_aminoisobutyrate_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mmtsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q98" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3aib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3HLYTCLNo1" sboTerm="SBO:0000176" id="R_3HLYTCLNo1" name="3_Hydroxy_L_tyrosine_carboxy_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_34dhphe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JU5" stoichiometry="0.00015432" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dopa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2552"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OADPCOATNo1" sboTerm="SBO:0000176" id="R_3OADPCOATNo1" name="3_oxoadipate_CoA_transferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FX5" stoichiometry="7.1786e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3951"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR100No1" sboTerm="SBO:0000176" id="R_3OAR100No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C100_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" 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stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hmrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR141No1" sboTerm="SBO:0000176" id="R_3OAR141No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ocmrs7eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hcmrs7eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR160No1" sboTerm="SBO:0000176" id="R_3OAR160No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3opalmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hpalmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR161No1" sboTerm="SBO:0000176" id="R_3OAR161No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ocpalm9eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hcpalm9eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR180No1" sboTerm="SBO:0000176" id="R_3OAR180No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ooctdACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hoctaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR181No1" sboTerm="SBO:0000176" id="R_3OAR181No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ocvac11eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hcvac11eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR40No1" sboTerm="SBO:0000176" id="R_3OAR40No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C40_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_actACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3haACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR60No1" sboTerm="SBO:0000176" id="R_3OAR60No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR80No1" sboTerm="SBO:0000176" id="R_3OAR80No1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C80_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ooctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hoctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_3OAS100" sboTerm="SBO:0000176" id="R_arm_3OAS100" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C100_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_3OAS100" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS100No1" sboTerm="SBO:0000176" id="R_3OAS100No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C100_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_3OAS100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL4" stoichiometry="0.0059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS100No2" sboTerm="SBO:0000176" id="R_3OAS100No2" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C100_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_3OAS100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS100No3" sboTerm="SBO:0000176" id="R_3OAS100No3" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C100_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_3OAS100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HQ0" stoichiometry="0.0059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_3OAS120" sboTerm="SBO:0000176" id="R_arm_3OAS120" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C120_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_3OAS120" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS120No1" sboTerm="SBO:0000176" id="R_3OAS120No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LL4" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS120" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS120No2" sboTerm="SBO:0000176" id="R_3OAS120No2" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C120_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> <speciesReference species="M_pmet_3OAS120" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS120No3" sboTerm="SBO:0000176" id="R_3OAS120No3" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C120_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88HQ0" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS120" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS121No1" sboTerm="SBO:0000176" id="R_3OAS121No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C121_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdec3eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ocddec5eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_3OAS140" sboTerm="SBO:0000176" id="R_arm_3OAS140" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C140_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_3OAS140" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS140No1" sboTerm="SBO:0000176" id="R_3OAS140No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LL4" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3omrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS140No2" sboTerm="SBO:0000176" id="R_3OAS140No2" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C140_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> <speciesReference species="M_pmet_3OAS140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3omrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS140No3" sboTerm="SBO:0000176" id="R_3OAS140No3" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C140_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88HQ0" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3omrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS141No1" sboTerm="SBO:0000176" id="R_3OAS141No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cddec5eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ocmrs7eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_3OAS160" sboTerm="SBO:0000176" id="R_arm_3OAS160" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C160_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_3OAS160" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS160No1" sboTerm="SBO:0000176" id="R_3OAS160No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LL4" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opalmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS160No2" sboTerm="SBO:0000176" id="R_3OAS160No2" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C160_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> <speciesReference species="M_pmet_3OAS160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opalmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS160No3" sboTerm="SBO:0000176" id="R_3OAS160No3" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C160_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88HQ0" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opalmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS161No1" sboTerm="SBO:0000176" id="R_3OAS161No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ocpalm9eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS180No1" sboTerm="SBO:0000176" id="R_3OAS180No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ooctdACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS181No1" sboTerm="SBO:0000176" id="R_3OAS181No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ocvac11eACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_3OAS60" sboTerm="SBO:0000176" id="R_arm_3OAS60" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C60_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_butACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_3OAS60" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS60No1" sboTerm="SBO:0000176" id="R_3OAS60No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LL4" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS60No2" sboTerm="SBO:0000176" id="R_3OAS60No2" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C60_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> <speciesReference species="M_pmet_3OAS60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS60No3" sboTerm="SBO:0000176" id="R_3OAS60No3" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C60_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88HQ0" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_3OAS80" sboTerm="SBO:0000176" id="R_arm_3OAS80" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C80_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_3OAS80" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS80No1" sboTerm="SBO:0000176" id="R_3OAS80No1" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C80_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LL4" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ooctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1916"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS80No2" sboTerm="SBO:0000176" id="R_3OAS80No2" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C80_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> <speciesReference species="M_pmet_3OAS80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ooctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAS80No3" sboTerm="SBO:0000176" id="R_3OAS80No3" name="3_oxoacyl_acyl_carrier_protein_synthase__n_C80_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88HQ0" stoichiometry="0.0059102" constant="true"/> <speciesReference species="M_pmet_3OAS80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ooctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_3OXCOAT" sboTerm="SBO:0000176" id="R_arm_3OXCOAT" name="3_oxoadipyl_CoA_thiolase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_3OXCOAT" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3280"/> <fbc:geneProductRef fbc:geneProduct="PP_1377"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OXCOATNo1" sboTerm="SBO:0000176" id="R_3OXCOATNo1" name="3_oxoadipyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_3OXCOAT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS3" stoichiometry="3.5613e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3280"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OXCOATNo2" sboTerm="SBO:0000176" id="R_3OXCOATNo2" name="3_oxoadipyl_CoA_thiolase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_3OXCOAT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N39" stoichiometry="3.5613e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1377"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4CMCOASNo1" sboTerm="SBO:0000176" id="R_4CMCOASNo1" name="feruloyl_coenzyme_A_synthetase__AMP_forming_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_T4hcinnm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HK0" stoichiometry="5.144e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coucoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3356"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_4CMLCL_kt" sboTerm="SBO:0000176" id="R_arm_4CMLCL_kt" name="4_carboxymuconolactone_decarboxylase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4cml_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_4CMLCL_kt" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1381"/> <fbc:geneProductRef fbc:geneProduct="PP_3648"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4CMLCL_ktNo1" sboTerm="SBO:0000176" id="R_4CMLCL_ktNo1" name="4_carboxymuconolactone_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_4CMLCL_kt" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N35" stoichiometry="2.0591e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1381"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4CMLCL_ktNo2" sboTerm="SBO:0000176" id="R_4CMLCL_ktNo2" name="4_carboxymuconolactone_decarboxylase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_4CMLCL_kt" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GS0" stoichiometry="2.0591e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3648"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HBHYOXNo1" sboTerm="SBO:0000176" id="R_4HBHYOXNo1" name="4_hydroxybenzoate_NADPHoxygen_oxidoreductase__3_hydroxylating_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4hbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H28" stoichiometry="4.4092e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3537"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HDPROONo1" sboTerm="SBO:0000176" id="R_4HDPROONo1" name="cis_4_hydroxy_D_proline_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4hpro_DC_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88NF6" stoichiometry="9.058e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1py4h3c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_focytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1255"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_4HTHRS" sboTerm="SBO:0000176" id="R_arm_4HTHRS" name="4_Hydroxy_L_threonine_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phthr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_4HTHRS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1471"/> <fbc:geneProductRef fbc:geneProduct="PP_0662"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HTHRSNo1" sboTerm="SBO:0000176" id="R_4HTHRSNo1" name="4_Hydroxy_L_threonine_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_4HTHRS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MU7" stoichiometry="3.7896e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hthr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1471"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4HTHRSNo2" sboTerm="SBO:0000176" id="R_4HTHRSNo2" name="4_Hydroxy_L_threonine_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_4HTHRS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q36" stoichiometry="3.7896e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hthr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0662"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OTNo1" sboTerm="SBO:0000176" id="R_4OTNo1" name="4_oxalocrotonate_tautomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2hmc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JY9" stoichiometry="9.6451e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_oxalc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2504"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OT2No1" sboTerm="SBO:0000176" id="R_4OT2No1" name="4_oxalocrotonate_tautomerase__pXylene_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hmccm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JY9" stoichiometry="9.6451e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2omcm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2504"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_A5PISO" sboTerm="SBO:0000176" id="R_arm_A5PISO" name="arabinose_5_phosphate_isomerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_A5PISO" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0957"/> <fbc:geneProductRef fbc:geneProduct="PP_1806"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_A5PISONo1" sboTerm="SBO:0000176" id="R_A5PISONo1" name="arabinose_5_phosphate_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_A5PISO" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P95" stoichiometry="1.9701e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ara5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0957"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_A5PISONo2" sboTerm="SBO:0000176" id="R_A5PISONo2" name="arabinose_5_phosphate_isomerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_A5PISO" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LX1" stoichiometry="1.9701e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ara5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1806"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AACOATNo1" sboTerm="SBO:0000176" id="R_AACOATNo1" name="acetoacetyl_CoA_synthetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IC8" stoichiometry="0.054595" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3071"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AASAD3No1" sboTerm="SBO:0000176" id="R_AASAD3No1" name="L_aminoadipate_semialdehyde_dehydrogenase__NADH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_L2aadp6sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CC3" stoichiometry="1.5839e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_L2aadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5258"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ABUTD" sboTerm="SBO:0000176" id="R_arm_ABUTD" name="Aminobutyraldehyde_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4abutn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ABUTD" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> <fbc:geneProductRef fbc:geneProduct="PP_1481"/> <fbc:geneProductRef fbc:geneProduct="PP_2801"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ABUTDNo1" sboTerm="SBO:0000176" id="R_ABUTDNo1" name="Aminobutyraldehyde_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ABUTD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ABUTDNo2" sboTerm="SBO:0000176" id="R_ABUTDNo2" name="Aminobutyraldehyde_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ABUTD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MT7" stoichiometry="0.00021044" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1481"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ABUTDNo3" sboTerm="SBO:0000176" id="R_ABUTDNo3" name="Aminobutyraldehyde_dehydrogenase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ABUTD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88J48" stoichiometry="0.00021044" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2801"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACACT1r" sboTerm="SBO:0000176" id="R_arm_ACACT1r" name="acetyl_CoA_C_acetyltransferase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACACT1r" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> <fbc:geneProductRef fbc:geneProduct="PP_3754"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACT1rNo1" sboTerm="SBO:0000176" id="R_ACACT1rNo1" name="acetyl_CoA_C_acetyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACACT1r" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L84" stoichiometry="1.8769e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACT1rNo2" sboTerm="SBO:0000176" id="R_ACACT1rNo2" name="acetyl_CoA_C_acetyltransferase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACACT1r" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E32" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACT1rNo3" sboTerm="SBO:0000176" id="R_ACACT1rNo3" name="acetyl_CoA_C_acetyltransferase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACACT1r" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GH0" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3754"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACBIPGTNo1" sboTerm="SBO:0000176" id="R_ACBIPGTNo1" name="Adenosyl_cobinamide_phosphate_guanyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M96" stoichiometry="0.0047893" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_agdpcbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1678"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACCOACNo1" sboTerm="SBO:0000176" id="R_ACCOACNo1" name="acetyl_CoA_carboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QD5" stoichiometry="0.00022584" constant="true"/> <speciesReference species="M_prot_Q88QD6" stoichiometry="0.00022584" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0559"/> <fbc:geneProductRef fbc:geneProduct="PP_0558"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACHBSNo1" sboTerm="SBO:0000176" id="R_ACHBSNo1" name="2_aceto_2_hydroxybutanoate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DY8" stoichiometry="2.2957e-06" constant="true"/> <speciesReference species="M_prot_Q88DY9" stoichiometry="2.2957e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ahbut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4679"/> <fbc:geneProductRef fbc:geneProduct="PP_4680"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACLS" sboTerm="SBO:0000176" id="R_arm_ACLS" name="acetolactate_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACLS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4679"/> <fbc:geneProductRef fbc:geneProduct="PP_4680"/> </fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1157"/> <fbc:geneProductRef fbc:geneProduct="PP_3365"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACLSNo1" sboTerm="SBO:0000176" id="R_ACLSNo1" name="acetolactate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DY8" stoichiometry="4.5914e-06" constant="true"/> <speciesReference species="M_prot_Q88DY9" stoichiometry="4.5914e-06" constant="true"/> <speciesReference species="M_pmet_ACLS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alac__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4679"/> <fbc:geneProductRef fbc:geneProduct="PP_4680"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACLSNo2" sboTerm="SBO:0000176" id="R_ACLSNo2" name="acetolactate_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACLS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q877U6" stoichiometry="4.5914e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alac__S_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1157"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD10fNo1" sboTerm="SBO:0000176" id="R_ACOAD10fNo1" name="acyl_CoA_dehydrogenase__heptanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hp2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD11fNo1" sboTerm="SBO:0000176" id="R_ACOAD11fNo1" name="acyl_CoA_dehydrogenase__nonanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD12f" sboTerm="SBO:0000176" id="R_arm_ACOAD12f" name="acyl_CoA_dehydrogenase__Phenyldecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdcacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD12f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD12fNo1" sboTerm="SBO:0000176" id="R_ACOAD12fNo1" name="acyl_CoA_dehydrogenase__Phenyldecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD12f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdca2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD12fNo2" sboTerm="SBO:0000176" id="R_ACOAD12fNo2" name="acyl_CoA_dehydrogenase__Phenyldecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACOAD12f" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdca2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD13f" sboTerm="SBO:0000176" id="R_arm_ACOAD13f" name="acyl_CoA_dehydrogenase__Phenylnonanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnonacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD13f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD13fNo1" sboTerm="SBO:0000176" id="R_ACOAD13fNo1" name="acyl_CoA_dehydrogenase__Phenylnonanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD13f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnona2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD13fNo2" sboTerm="SBO:0000176" id="R_ACOAD13fNo2" name="acyl_CoA_dehydrogenase__Phenylnonanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD13f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnona2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD14f" sboTerm="SBO:0000176" id="R_arm_ACOAD14f" name="acyl_CoA_dehydrogenase__Phenyloctanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_poctacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD14f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD14fNo1" sboTerm="SBO:0000176" id="R_ACOAD14fNo1" name="acyl_CoA_dehydrogenase__Phenyloctanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD14f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pocta2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD14fNo2" sboTerm="SBO:0000176" id="R_ACOAD14fNo2" name="acyl_CoA_dehydrogenase__Phenyloctanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD14f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pocta2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD15f" sboTerm="SBO:0000176" id="R_arm_ACOAD15f" name="acyl_CoA_dehydrogenase__Phenylheptanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD15f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD15fNo1" sboTerm="SBO:0000176" id="R_ACOAD15fNo1" name="acyl_CoA_dehydrogenase__Phenylheptanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD15f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_php2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD15fNo2" sboTerm="SBO:0000176" id="R_ACOAD15fNo2" name="acyl_CoA_dehydrogenase__Phenylheptanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD15f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_php2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD16f" sboTerm="SBO:0000176" id="R_arm_ACOAD16f" name="acyl_CoA_dehydrogenase__Phenylhexanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD16f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD16fNo1" sboTerm="SBO:0000176" id="R_ACOAD16fNo1" name="acyl_CoA_dehydrogenase__Phenylhexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD16f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxa2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD16fNo2" sboTerm="SBO:0000176" id="R_ACOAD16fNo2" name="acyl_CoA_dehydrogenase__Phenylhexanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD16f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxa2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD17f" sboTerm="SBO:0000176" id="R_arm_ACOAD17f" name="acyl_CoA_dehydrogenase__Phenylpentanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD17f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD17fNo1" sboTerm="SBO:0000176" id="R_ACOAD17fNo1" name="acyl_CoA_dehydrogenase__Phenylpentanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD17f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD17fNo2" sboTerm="SBO:0000176" id="R_ACOAD17fNo2" name="acyl_CoA_dehydrogenase__Phenylpentanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD17f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD18f" sboTerm="SBO:0000176" id="R_arm_ACOAD18f" name="acyl_CoA_dehydrogenase__Phenylbutyryl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pbcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD18f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD18fNo1" sboTerm="SBO:0000176" id="R_ACOAD18fNo1" name="acyl_CoA_dehydrogenase__Phenylbutyryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD18f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD18fNo2" sboTerm="SBO:0000176" id="R_ACOAD18fNo2" name="acyl_CoA_dehydrogenase__Phenylbutyryl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD18f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD19f" sboTerm="SBO:0000176" id="R_arm_ACOAD19f" name="acyl_CoA_dehydrogenase__Phenylpropionyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phppcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD19f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD19fNo1" sboTerm="SBO:0000176" id="R_ACOAD19fNo1" name="acyl_CoA_dehydrogenase__Phenylpropionyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD19f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cinmcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD19fNo2" sboTerm="SBO:0000176" id="R_ACOAD19fNo2" name="acyl_CoA_dehydrogenase__Phenylpropionyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD19f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cinmcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD1f" sboTerm="SBO:0000176" id="R_arm_ACOAD1f" name="acyl_CoA_dehydrogenase__butanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_btcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD1f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD1fNo1" sboTerm="SBO:0000176" id="R_ACOAD1fNo1" name="acyl_CoA_dehydrogenase__butanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD1f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD1fNo2" sboTerm="SBO:0000176" id="R_ACOAD1fNo2" name="acyl_CoA_dehydrogenase__butanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACOAD1f" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS3" stoichiometry="3.2527e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD20fNo1" sboTerm="SBO:0000176" id="R_ACOAD20fNo1" name="acyl_CoA_dehydrogenase__6_acetylthiohexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6ath2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD21fNo1" sboTerm="SBO:0000176" id="R_ACOAD21fNo1" name="acyl_CoA_dehydrogenase__4_acetylthiobutanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4atb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD22fNo1" sboTerm="SBO:0000176" id="R_ACOAD22fNo1" name="acyl_CoA_dehydrogenase__vaccenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD23fNo1" sboTerm="SBO:0000176" id="R_ACOAD23fNo1" name="acyl_CoA_dehydrogenase__cis_hexadec_9_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD24fNo1" sboTerm="SBO:0000176" id="R_ACOAD24fNo1" name="acyl_CoA_dehydrogenase__cis_tetradec_7_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tde2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD25fNo1" sboTerm="SBO:0000176" id="R_ACOAD25fNo1" name="acyl_CoA_dehydrogenase__cis_dodedec_5_enoyl_CoA__C121d5_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ddecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD26fNo1" sboTerm="SBO:0000176" id="R_ACOAD26fNo1" name="acyl_CoA_dehydrogenase__acyl_CoA_dehydrogenase__oleicyl_CoA___C181d9_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ode2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD27fNo1" sboTerm="SBO:0000176" id="R_ACOAD27fNo1" name="acyl_CoA_dehydrogenase__cis_hexadec_7_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd7coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd7_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD28fNo1" sboTerm="SBO:0000176" id="R_ACOAD28fNo1" name="acyl_CoA_dehydrogenase__cis_tetradec_5_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD29fNo1" sboTerm="SBO:0000176" id="R_ACOAD29fNo1" name="acyl_CoA_dehydrogenase__petroselenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptslacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptsla2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD2f" sboTerm="SBO:0000176" id="R_arm_ACOAD2f" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD2f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2fNo1" sboTerm="SBO:0000176" id="R_ACOAD2fNo1" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS3" stoichiometry="3.2527e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD2f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2fNo2" sboTerm="SBO:0000176" id="R_ACOAD2fNo2" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD2f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2fNo3" sboTerm="SBO:0000176" id="R_ACOAD2fNo3" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACOAD2f" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2fNo4" sboTerm="SBO:0000176" id="R_ACOAD2fNo4" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACOAD2f" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD30fNo1" sboTerm="SBO:0000176" id="R_ACOAD30fNo1" name="acyl_CoA_dehydrogenase__cis_hexadec_4_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd4_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD31fNo1" sboTerm="SBO:0000176" id="R_ACOAD31fNo1" name="acyl_CoA_dehydrogenase__linoleic_coenzyme_A_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD32fNo1" sboTerm="SBO:0000176" id="R_ACOAD32fNo1" name="acyl_CoA_dehydrogenase__cis_cis_hexadec_7_10_dienoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd_7_10_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd710_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD33fNo1" sboTerm="SBO:0000176" id="R_ACOAD33fNo1" name="acyl_CoA_dehydrogenase__cis_cis_tetradec_5_8_dienoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td_5_8_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td58_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD34fNo1" sboTerm="SBO:0000176" id="R_ACOAD34fNo1" name="acyl_CoA_dehydrogenase__4_cis_decenoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dec4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD3f" sboTerm="SBO:0000176" id="R_arm_ACOAD3f" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD3f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD3fNo1" sboTerm="SBO:0000176" id="R_ACOAD3fNo1" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD3f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD3fNo2" sboTerm="SBO:0000176" id="R_ACOAD3fNo2" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD3f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD3fNo3" sboTerm="SBO:0000176" id="R_ACOAD3fNo3" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD3f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD4f" sboTerm="SBO:0000176" id="R_arm_ACOAD4f" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD4f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4fNo1" sboTerm="SBO:0000176" id="R_ACOAD4fNo1" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD4f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4fNo2" sboTerm="SBO:0000176" id="R_ACOAD4fNo2" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD4f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4fNo3" sboTerm="SBO:0000176" id="R_ACOAD4fNo3" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD4f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4fNo4" sboTerm="SBO:0000176" id="R_ACOAD4fNo4" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACOAD4f" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K54" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD5f" sboTerm="SBO:0000176" id="R_arm_ACOAD5f" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD5f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5fNo1" sboTerm="SBO:0000176" id="R_ACOAD5fNo1" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5fNo2" sboTerm="SBO:0000176" id="R_ACOAD5fNo2" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5fNo3" sboTerm="SBO:0000176" id="R_ACOAD5fNo3" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5fNo4" sboTerm="SBO:0000176" id="R_ACOAD5fNo4" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K54" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD6f" sboTerm="SBO:0000176" id="R_arm_ACOAD6f" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD6f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6fNo1" sboTerm="SBO:0000176" id="R_ACOAD6fNo1" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6fNo2" sboTerm="SBO:0000176" id="R_ACOAD6fNo2" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6fNo3" sboTerm="SBO:0000176" id="R_ACOAD6fNo3" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6fNo4" sboTerm="SBO:0000176" id="R_ACOAD6fNo4" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K54" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD7f" sboTerm="SBO:0000176" id="R_arm_ACOAD7f" name="acyl_CoA_dehydrogenase__hexadecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD7f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD7fNo1" sboTerm="SBO:0000176" id="R_ACOAD7fNo1" name="acyl_CoA_dehydrogenase__hexadecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD7f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD7fNo2" sboTerm="SBO:0000176" id="R_ACOAD7fNo2" name="acyl_CoA_dehydrogenase__hexadecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD7f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD8f" sboTerm="SBO:0000176" id="R_arm_ACOAD8f" name="acyl_CoA_dehydrogenase__octadecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD8f" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD8fNo1" sboTerm="SBO:0000176" id="R_ACOAD8fNo1" name="acyl_CoA_dehydrogenase__octadecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD8f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_od2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD8fNo2" sboTerm="SBO:0000176" id="R_ACOAD8fNo2" name="acyl_CoA_dehydrogenase__octadecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD8f" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_od2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOATANo1" sboTerm="SBO:0000176" id="R_ACOATANo1" name="Acetyl_CoA_ACP_transacylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACODANo1" sboTerm="SBO:0000176" id="R_ACODANo1" name="acetylornithine_deacetylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acorn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CJ5" stoichiometry="7.3099e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5186"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACONCtex" sboTerm="SBO:0000176" id="R_arm_ACONCtex" name="cis_aconitate_transport__external (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACONCtex" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONCtexNo1" sboTerm="SBO:0000176" id="R_ACONCtexNo1" name="cis_aconitate_transport__external (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACONCtex" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MZ9" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONCtexNo2" sboTerm="SBO:0000176" id="R_ACONCtexNo2" name="cis_aconitate_transport__external (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACONCtex" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L77" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONMTNo1" sboTerm="SBO:0000176" id="R_ACONMTNo1" name="Trans_aconitate_methyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acon_T_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JV2" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aconm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACONTa" sboTerm="SBO:0000176" id="R_arm_ACONTa" name="aconitase__half_reaction_A__Citrate_hydro_lyase_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACONTa" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTaNo1" sboTerm="SBO:0000176" id="R_ACONTaNo1" name="aconitase__half_reaction_A__Citrate_hydro_lyase_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACONTa" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L24" stoichiometry="5.2411e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTaNo2" sboTerm="SBO:0000176" id="R_ACONTaNo2" name="aconitase__half_reaction_A__Citrate_hydro_lyase_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACONTa" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KF1" stoichiometry="5.2411e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACONTb" sboTerm="SBO:0000176" id="R_arm_ACONTb" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACONTb" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTbNo1" sboTerm="SBO:0000176" id="R_ACONTbNo1" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KF1" stoichiometry="5.2411e-05" constant="true"/> <speciesReference species="M_pmet_ACONTb" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTbNo2" sboTerm="SBO:0000176" id="R_ACONTbNo2" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L24" stoichiometry="5.2411e-05" constant="true"/> <speciesReference species="M_pmet_ACONTb" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSNo1" sboTerm="SBO:0000176" id="R_ACSNo1" name="acetyl_CoA_synthetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IC8" stoichiometry="0.054595" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_ACS2No1" sboTerm="SBO:0000176" id="R_ACS2No1" name="acetyl_CoA_synthase__propionate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KD9" stoichiometry="8.1699e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2351"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC100" sboTerm="SBO:0000176" id="R_arm_ACSPHAC100" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C100_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hdcaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC100" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC100No1" sboTerm="SBO:0000176" id="R_ACSPHAC100No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C100_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACSPHAC100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC100No2" sboTerm="SBO:0000176" id="R_ACSPHAC100No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C100_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACSPHAC100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC100No3" sboTerm="SBO:0000176" id="R_ACSPHAC100No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C100_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ACSPHAC100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC101" sboTerm="SBO:0000176" id="R_arm_ACSPHAC101" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C101_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R3hdec4e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC101" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC101No1" sboTerm="SBO:0000176" id="R_ACSPHAC101No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C101_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC101" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC101No2" sboTerm="SBO:0000176" id="R_ACSPHAC101No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C101_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC101" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC101No3" sboTerm="SBO:0000176" id="R_ACSPHAC101No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C101_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC101" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC120" sboTerm="SBO:0000176" id="R_arm_ACSPHAC120" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C120_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hdda_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC120" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC120No1" sboTerm="SBO:0000176" id="R_ACSPHAC120No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC120" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC120No2" sboTerm="SBO:0000176" id="R_ACSPHAC120No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C120_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC120" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC120No3" sboTerm="SBO:0000176" id="R_ACSPHAC120No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C120_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC120" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC121" sboTerm="SBO:0000176" id="R_arm_ACSPHAC121" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hdd5ea_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC121" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC121No1" sboTerm="SBO:0000176" id="R_ACSPHAC121No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC121" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC121No2" sboTerm="SBO:0000176" id="R_ACSPHAC121No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC121" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC121No3" sboTerm="SBO:0000176" id="R_ACSPHAC121No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC121" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC121d6" sboTerm="SBO:0000176" id="R_arm_ACSPHAC121d6" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121d6_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hdd6e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC121d6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC121d6No1" sboTerm="SBO:0000176" id="R_ACSPHAC121d6No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121d6_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC121d6" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC121d6No2" sboTerm="SBO:0000176" id="R_ACSPHAC121d6No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121d6_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC121d6" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC121d6No3" sboTerm="SBO:0000176" id="R_ACSPHAC121d6No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C121d6_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC121d6" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC140" sboTerm="SBO:0000176" id="R_arm_ACSPHAC140" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C140_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3httdca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC140" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC140No1" sboTerm="SBO:0000176" id="R_ACSPHAC140No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC140No2" sboTerm="SBO:0000176" id="R_ACSPHAC140No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C140_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC140No3" sboTerm="SBO:0000176" id="R_ACSPHAC140No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C140_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC141" sboTerm="SBO:0000176" id="R_arm_ACSPHAC141" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hcmrs7e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC141" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC141No1" sboTerm="SBO:0000176" id="R_ACSPHAC141No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC141No2" sboTerm="SBO:0000176" id="R_ACSPHAC141No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC141No3" sboTerm="SBO:0000176" id="R_ACSPHAC141No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC141d5" sboTerm="SBO:0000176" id="R_arm_ACSPHAC141d5" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3htd5e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC141d5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC141d5No1" sboTerm="SBO:0000176" id="R_ACSPHAC141d5No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC141d5" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC141d5No2" sboTerm="SBO:0000176" id="R_ACSPHAC141d5No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC141d5" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC141d5No3" sboTerm="SBO:0000176" id="R_ACSPHAC141d5No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C141_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC141d5" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC142" sboTerm="SBO:0000176" id="R_arm_ACSPHAC142" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C142_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3htd58e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC142" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC142No1" sboTerm="SBO:0000176" id="R_ACSPHAC142No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C142_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC142" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC142No2" sboTerm="SBO:0000176" id="R_ACSPHAC142No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C142_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC142" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC142No3" sboTerm="SBO:0000176" id="R_ACSPHAC142No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C142_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC142" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC160" sboTerm="SBO:0000176" id="R_arm_ACSPHAC160" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C160_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hhdca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC160" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC160No1" sboTerm="SBO:0000176" id="R_ACSPHAC160No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC160No2" sboTerm="SBO:0000176" id="R_ACSPHAC160No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C160_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC160No3" sboTerm="SBO:0000176" id="R_ACSPHAC160No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C160_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC40" sboTerm="SBO:0000176" id="R_arm_ACSPHAC40" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C40_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC40" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC40No1" sboTerm="SBO:0000176" id="R_ACSPHAC40No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C40_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC40No2" sboTerm="SBO:0000176" id="R_ACSPHAC40No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C40_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC40No3" sboTerm="SBO:0000176" id="R_ACSPHAC40No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C40_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC50" sboTerm="SBO:0000176" id="R_arm_ACSPHAC50" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C50_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC50" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC50No1" sboTerm="SBO:0000176" id="R_ACSPHAC50No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C50_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC50No2" sboTerm="SBO:0000176" id="R_ACSPHAC50No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C50_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC50No3" sboTerm="SBO:0000176" id="R_ACSPHAC50No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C50_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC60" sboTerm="SBO:0000176" id="R_arm_ACSPHAC60" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C60_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hhxa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC60" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC60No1" sboTerm="SBO:0000176" id="R_ACSPHAC60No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC60No2" sboTerm="SBO:0000176" id="R_ACSPHAC60No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C60_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC60No3" sboTerm="SBO:0000176" id="R_ACSPHAC60No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C60_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC70" sboTerm="SBO:0000176" id="R_arm_ACSPHAC70" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C70_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hhpa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC70" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC70No1" sboTerm="SBO:0000176" id="R_ACSPHAC70No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C70_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC70" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC70No2" sboTerm="SBO:0000176" id="R_ACSPHAC70No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C70_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC70" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC70No3" sboTerm="SBO:0000176" id="R_ACSPHAC70No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C70_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC70" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC80" sboTerm="SBO:0000176" id="R_arm_ACSPHAC80" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C80_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hocta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC80" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC80No1" sboTerm="SBO:0000176" id="R_ACSPHAC80No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C80_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC80No2" sboTerm="SBO:0000176" id="R_ACSPHAC80No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C80_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC80No3" sboTerm="SBO:0000176" id="R_ACSPHAC80No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C80_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHAC90" sboTerm="SBO:0000176" id="R_arm_ACSPHAC90" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C90_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hnonaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHAC90" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC90No1" sboTerm="SBO:0000176" id="R_ACSPHAC90No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C90_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC90" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC90No2" sboTerm="SBO:0000176" id="R_ACSPHAC90No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C90_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC90" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHAC90No3" sboTerm="SBO:0000176" id="R_ACSPHAC90No3" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__C90_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHAC90" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACP100" sboTerm="SBO:0000176" id="R_arm_ACSPHACP100" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C100_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpdeca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACP100" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP100No1" sboTerm="SBO:0000176" id="R_ACSPHACP100No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C100_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP100" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP100No2" sboTerm="SBO:0000176" id="R_ACSPHACP100No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C100_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP100" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACP40" sboTerm="SBO:0000176" id="R_arm_ACSPHACP40" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C40_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACP40" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP40No1" sboTerm="SBO:0000176" id="R_ACSPHACP40No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C40_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP40No2" sboTerm="SBO:0000176" id="R_ACSPHACP40No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C40_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACP50" sboTerm="SBO:0000176" id="R_arm_ACSPHACP50" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C50_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hppta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACP50" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP50No1" sboTerm="SBO:0000176" id="R_ACSPHACP50No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C50_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP50No2" sboTerm="SBO:0000176" id="R_ACSPHACP50No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C50_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACP60" sboTerm="SBO:0000176" id="R_arm_ACSPHACP60" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C60_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hphxa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACP60" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP60No1" sboTerm="SBO:0000176" id="R_ACSPHACP60No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP60No2" sboTerm="SBO:0000176" id="R_ACSPHACP60No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C60_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACP70" sboTerm="SBO:0000176" id="R_arm_ACSPHACP70" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C70_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hphpa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACP70" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP70No1" sboTerm="SBO:0000176" id="R_ACSPHACP70No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C70_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP70" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP70No2" sboTerm="SBO:0000176" id="R_ACSPHACP70No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C70_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP70" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACP80" sboTerm="SBO:0000176" id="R_arm_ACSPHACP80" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C80_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpocta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACP80" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP80No1" sboTerm="SBO:0000176" id="R_ACSPHACP80No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C80_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP80No2" sboTerm="SBO:0000176" id="R_ACSPHACP80No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C80_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACP90" sboTerm="SBO:0000176" id="R_arm_ACSPHACP90" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C90_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpnona_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACP90" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP90No1" sboTerm="SBO:0000176" id="R_ACSPHACP90No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C90_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP90" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACP90No2" sboTerm="SBO:0000176" id="R_ACSPHACP90No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Phenyl_C90_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACP90" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACT40" sboTerm="SBO:0000176" id="R_arm_ACSPHACT40" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Acetylthio_C40_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3h4atba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACT40" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACT40No1" sboTerm="SBO:0000176" id="R_ACSPHACT40No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Acetylthio_C40_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACT40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACT40No2" sboTerm="SBO:0000176" id="R_ACSPHACT40No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Acetylthio_C40_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACT40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACSPHACT60" sboTerm="SBO:0000176" id="R_arm_ACSPHACT60" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Acetylthio_C60_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3h6atha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACSPHACT60" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACT60No1" sboTerm="SBO:0000176" id="R_ACSPHACT60No1" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Acetylthio_C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACT60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACSPHACT60No2" sboTerm="SBO:0000176" id="R_ACSPHACT60No2" name="R_3_Hydroxyacid_Acyl_CoA_Synthetase__Acetylthio_C60_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_ACSPHACT60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACTD2No1" sboTerm="SBO:0000176" id="R_ACTD2No1" name="acetoin_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QD8" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_prot_Q88QD9" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_prot_Q88QE0" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_prot_Q88QE1" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0555"/> <fbc:geneProductRef fbc:geneProduct="PP_0554"/> <fbc:geneProductRef fbc:geneProduct="PP_0553"/> <fbc:geneProductRef fbc:geneProduct="PP_0556"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADCLNo1" sboTerm="SBO:0000176" id="R_ADCLNo1" name="4_aminobenzoate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4adcho_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL3" stoichiometry="1.4393e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1917"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADCPS1No1" sboTerm="SBO:0000176" id="R_ADCPS1No1" name="adenosylcobinamide_phosphate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adcobhex_c" stoichiometry="1" constant="true"/> <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M98" stoichiometry="7.3099e-06" constant="true"/> <speciesReference species="M_prot_Q88M99" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1676"/> <fbc:geneProductRef fbc:geneProduct="PP_1675"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADCPS2No1" sboTerm="SBO:0000176" id="R_ADCPS2No1" name="adenosylcobinamide_phosphate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adcobhex_c" stoichiometry="1" constant="true"/> <speciesReference species="M_applp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M98" stoichiometry="7.3099e-06" constant="true"/> <speciesReference species="M_prot_Q88M99" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1676"/> <fbc:geneProductRef fbc:geneProduct="PP_1675"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADCSNo1" sboTerm="SBO:0000176" id="R_ADCSNo1" name="4_amino_4_deoxychorismate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KG1" stoichiometry="0.00012626" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4adcho_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2329"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADNCYCNo1" sboTerm="SBO:0000176" id="R_ADNCYCNo1" name="adenylate_cyclase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CF9" stoichiometry="6.0386e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_camp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5222"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADNUCNo1" sboTerm="SBO:0000176" id="R_ADNUCNo1" name="adenosine_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K32" stoichiometry="0.00013228" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2460"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADOCBIKNo1" sboTerm="SBO:0000176" id="R_ADOCBIKNo1" name="Adenosyl_cobinamide_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M96" stoichiometry="0.0014543" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1678"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ADPRDP" sboTerm="SBO:0000176" id="R_arm_ADPRDP" name="ADPribose_diphosphatase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adprib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ADPRDP" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4919"/> <fbc:geneProductRef fbc:geneProduct="PP_0260"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADPRDPNo1" sboTerm="SBO:0000176" id="R_ADPRDPNo1" name="ADPribose_diphosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ADPRDP" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DA8" stoichiometry="3.0193e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4919"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADPRDPNo2" sboTerm="SBO:0000176" id="R_ADPRDPNo2" name="ADPribose_diphosphatase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ADPRDP" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R74" stoichiometry="4.3809e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0260"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSELKNo1" sboTerm="SBO:0000176" id="R_ADSELKNo1" name="adenylyl_selenate_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adsel_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NA8" stoichiometry="7.716e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3padsel_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1304"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSKNo1" sboTerm="SBO:0000176" id="R_ADSKNo1" name="adenylyl_sulfate_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aps_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NA8" stoichiometry="7.716e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_paps_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1304"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSL1rNo1" sboTerm="SBO:0000176" id="R_ADSL1rNo1" name="adenylsuccinate_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dcamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FR7" stoichiometry="0.00015964" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4016"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSL2rNo1" sboTerm="SBO:0000176" id="R_ADSL2rNo1" name="adenylosuccinate_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_25aics_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FR7" stoichiometry="0.00015964" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aicar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4016"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM3PANo1" sboTerm="SBO:0000176" id="R_AGM3PANo1" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_amidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhgm3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PQ9" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0789"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM3PAppNo1" sboTerm="SBO:0000176" id="R_AGM3PAppNo1" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_amidase__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhgm3p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DD0" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdap_p" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4897"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM3PHNo1" sboTerm="SBO:0000176" id="R_AGM3PHNo1" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_beta__1_4_N_acetylglucosaminidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhgm3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KZ4" stoichiometry="4.5687e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhm3p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2145"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM4PANo1" sboTerm="SBO:0000176" id="R_AGM4PANo1" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_amidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhgm4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PQ9" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdapDala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0789"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM4PAppNo1" sboTerm="SBO:0000176" id="R_AGM4PAppNo1" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_amidase__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DD0" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdapDala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4897"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGM4PHNo1" sboTerm="SBO:0000176" id="R_AGM4PHNo1" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_beta__1_4_N_acetylglucosaminidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhgm4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KZ4" stoichiometry="4.5687e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhm4p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2145"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGMHNo1" sboTerm="SBO:0000176" id="R_AGMHNo1" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_beta__1_4_N_acetylglucosaminidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhgm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KZ4" stoichiometry="4.5687e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2145"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGMTNo1" sboTerm="SBO:0000176" id="R_AGMTNo1" name="agmatinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_agm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KU3" stoichiometry="0.0086806" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2196"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPAT120" sboTerm="SBO:0000176" id="R_arm_AGPAT120" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C120_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1ddecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPAT120" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT120No1" sboTerm="SBO:0000176" id="R_AGPAT120No1" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_AGPAT120" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LT3" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT120No2" sboTerm="SBO:0000176" id="R_AGPAT120No2" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C120_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_AGPAT120" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RS1" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPAT140" sboTerm="SBO:0000176" id="R_arm_AGPAT140" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C140_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1tdecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPAT140" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT140No1" sboTerm="SBO:0000176" id="R_AGPAT140No1" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT3" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT140No2" sboTerm="SBO:0000176" id="R_AGPAT140No2" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C140_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RS1" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPAT141" sboTerm="SBO:0000176" id="R_arm_AGPAT141" name="1_tetradec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C141_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1tdec7eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPAT141" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT141No1" sboTerm="SBO:0000176" id="R_AGPAT141No1" name="1_tetradec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RS1" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT141No2" sboTerm="SBO:0000176" id="R_AGPAT141No2" name="1_tetradec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C141_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT3" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPAT160" sboTerm="SBO:0000176" id="R_arm_AGPAT160" name="1_hexadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C160_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1hdecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPAT160" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT160No1" sboTerm="SBO:0000176" id="R_AGPAT160No1" name="1_hexadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT3" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT160No2" sboTerm="SBO:0000176" id="R_AGPAT160No2" name="1_hexadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C160_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RS1" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPAT161" sboTerm="SBO:0000176" id="R_arm_AGPAT161" name="1_hexadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C161_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1hdec9eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPAT161" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT161No1" sboTerm="SBO:0000176" id="R_AGPAT161No1" name="1_hexadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT3" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT161No2" sboTerm="SBO:0000176" id="R_AGPAT161No2" name="1_hexadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C161_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RS1" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPAT180" sboTerm="SBO:0000176" id="R_arm_AGPAT180" name="1_octadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C180_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1odecg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcaACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPAT180" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT180No1" sboTerm="SBO:0000176" id="R_AGPAT180No1" name="1_octadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT3" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT180No2" sboTerm="SBO:0000176" id="R_AGPAT180No2" name="1_octadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C180_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RS1" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPAT181" sboTerm="SBO:0000176" id="R_arm_AGPAT181" name="1_octadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C181_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1odec11eg3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octeACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPAT181" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT181No1" sboTerm="SBO:0000176" id="R_AGPAT181No1" name="1_octadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT3" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPAT181No2" sboTerm="SBO:0000176" id="R_AGPAT181No2" name="1_octadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C181_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RS1" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_AGPAT181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AHCNo1" sboTerm="SBO:0000176" id="R_AHCNo1" name="adenosylhomocysteinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FWS3" stoichiometry="0.0047893" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4976"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AHSERL2" sboTerm="SBO:0000176" id="R_arm_AHSERL2" name="O_acetylhomoserine__thiol__lyase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_achms_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AHSERL2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2528"/> <fbc:geneProductRef fbc:geneProduct="PP_2001"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AHSERL2No1" sboTerm="SBO:0000176" id="R_AHSERL2No1" name="O_acetylhomoserine__thiol__lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_AHSERL2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JW9" stoichiometry="1.2957e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2528"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AHSERL2No2" sboTerm="SBO:0000176" id="R_AHSERL2No2" name="O_acetylhomoserine__thiol__lyase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_AHSERL2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LD4" stoichiometry="5.9102e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2001"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AIRC2No1" sboTerm="SBO:0000176" id="R_AIRC2No1" name="phosphoribosylaminoimidazole_carboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_air_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C48" stoichiometry="4.7081e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5caiz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5335"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AIRC3No1" sboTerm="SBO:0000176" id="R_AIRC3No1" name="phosphoribosylaminoimidazole_carboxylase__mutase_rxn_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5aizc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C47" stoichiometry="1.7806e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5caiz_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5336"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGDHNo1" sboTerm="SBO:0000176" id="R_AKGDHNo1" name="2_Oxoglutarate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FA9" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88FB0" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88FB1" stoichiometry="1.9608e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4189"/> <fbc:geneProductRef fbc:geneProduct="PP_4188"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGDaNo1" sboTerm="SBO:0000176" id="R_AKGDaNo1" name="oxoglutarate_dehydrogenase__lipoamide_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FA9" stoichiometry="0.00020281" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sdhlam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGDbrNo1" sboTerm="SBO:0000176" id="R_AKGDbrNo1" name="oxoglutarate_dehydrogenase__dihydrolipoamide_S_succinyltransferase__reversible (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sdhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FB0" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALAALAabcpp" sboTerm="SBO:0000176" id="R_arm_ALAALAabcpp" name="D_alanyl_D_alanine__DalaDala__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALAALAabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAALAabcppNo1" sboTerm="SBO:0000176" id="R_ALAALAabcppNo1" name="D_alanyl_D_alanine__DalaDala__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALAALAabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAALAabcppNo2" sboTerm="SBO:0000176" id="R_ALAALAabcppNo2" name="D_alanyl_D_alanine__DalaDala__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALAALAabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAALAabcppNo3" sboTerm="SBO:0000176" id="R_ALAALAabcppNo3" name="D_alanyl_D_alanine__DalaDala__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALAALAabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAALAtexNo1" sboTerm="SBO:0000176" id="R_ALAALAtexNo1" name="D_alanyl_D_alanine__DalaDala__transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaala_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALAGLUabcpp" sboTerm="SBO:0000176" id="R_arm_ALAGLUabcpp" name="L_Alaninylglutamate__LalaLglu__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_LalaLglu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALAGLUabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAGLUabcppNo1" sboTerm="SBO:0000176" id="R_ALAGLUabcppNo1" name="L_Alaninylglutamate__LalaLglu__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALAGLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaLglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAGLUabcppNo2" sboTerm="SBO:0000176" id="R_ALAGLUabcppNo2" name="L_Alaninylglutamate__LalaLglu__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALAGLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaLglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAGLUabcppNo3" sboTerm="SBO:0000176" id="R_ALAGLUabcppNo3" name="L_Alaninylglutamate__LalaLglu__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALAGLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaLglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALAHISabcpp" sboTerm="SBO:0000176" id="R_arm_ALAHISabcpp" name="L_Alaninylhistidine__Ala_His__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alahis_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALAHISabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAHISabcppNo1" sboTerm="SBO:0000176" id="R_ALAHISabcppNo1" name="L_Alaninylhistidine__Ala_His__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALAHISabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alahis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAHISabcppNo2" sboTerm="SBO:0000176" id="R_ALAHISabcppNo2" name="L_Alaninylhistidine__Ala_His__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALAHISabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alahis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAHISabcppNo3" sboTerm="SBO:0000176" id="R_ALAHISabcppNo3" name="L_Alaninylhistidine__Ala_His__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALAHISabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alahis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAHIStexNo1" sboTerm="SBO:0000176" id="R_ALAHIStexNo1" name="L_Alaninylhistidine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alahis_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alahis_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALALEUabcpp" sboTerm="SBO:0000176" id="R_arm_ALALEUabcpp" name="L_Alaninylleucine__Ala_Leu__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaleu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALALEUabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALALEUabcppNo1" sboTerm="SBO:0000176" id="R_ALALEUabcppNo1" name="L_Alaninylleucine__Ala_Leu__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALALEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALALEUabcppNo2" sboTerm="SBO:0000176" id="R_ALALEUabcppNo2" name="L_Alaninylleucine__Ala_Leu__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALALEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALALEUabcppNo3" sboTerm="SBO:0000176" id="R_ALALEUabcppNo3" name="L_Alaninylleucine__Ala_Leu__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALALEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALALEUtexNo1" sboTerm="SBO:0000176" id="R_ALALEUtexNo1" name="L_Alaninylleucine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaleu_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaleu_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALATA_L" sboTerm="SBO:0000176" id="R_arm_ALATA_L" name="L_alanine_transaminase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALATA_L" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1872"/> <fbc:geneProductRef fbc:geneProduct="PP_0817"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATA_LNo1" sboTerm="SBO:0000176" id="R_ALATA_LNo1" name="L_alanine_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALATA_L" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LQ7" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1872"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATA_LNo2" sboTerm="SBO:0000176" id="R_ALATA_LNo2" name="L_alanine_transaminase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALATA_L" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PN2" stoichiometry="4.8733e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALATHRabcpp" sboTerm="SBO:0000176" id="R_arm_ALATHRabcpp" name="L_Alaninylthreonine__Ala_thr__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alathr_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALATHRabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATHRabcppNo1" sboTerm="SBO:0000176" id="R_ALATHRabcppNo1" name="L_Alaninylthreonine__Ala_thr__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALATHRabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alathr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATHRabcppNo2" sboTerm="SBO:0000176" id="R_ALATHRabcppNo2" name="L_Alaninylthreonine__Ala_thr__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALATHRabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alathr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATHRabcppNo3" sboTerm="SBO:0000176" id="R_ALATHRabcppNo3" name="L_Alaninylthreonine__Ala_thr__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALATHRabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alathr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATHRtexNo1" sboTerm="SBO:0000176" id="R_ALATHRtexNo1" name="L_Alaninylthreonine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alathr_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alathr_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALATRPabcpp" sboTerm="SBO:0000176" id="R_arm_ALATRPabcpp" name="L_Alaninyltryptophan__Ala_Trp__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alatrp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALATRPabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATRPabcppNo1" sboTerm="SBO:0000176" id="R_ALATRPabcppNo1" name="L_Alaninyltryptophan__Ala_Trp__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALATRPabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alatrp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATRPabcppNo2" sboTerm="SBO:0000176" id="R_ALATRPabcppNo2" name="L_Alaninyltryptophan__Ala_Trp__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALATRPabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alatrp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATRPabcppNo3" sboTerm="SBO:0000176" id="R_ALATRPabcppNo3" name="L_Alaninyltryptophan__Ala_Trp__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ALATRPabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_alatrp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATRPtexNo1" sboTerm="SBO:0000176" id="R_ALATRPtexNo1" name="L_Alaninyltryptophan_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alatrp_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alatrp_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALCD19" sboTerm="SBO:0000176" id="R_arm_ALCD19" name="alcohol_dehydrogenase__glycerol_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALCD19" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD19No1" sboTerm="SBO:0000176" id="R_ALCD19No1" name="alcohol_dehydrogenase__glycerol_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALCD19" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE9" stoichiometry="0.0020276" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD19No2" sboTerm="SBO:0000176" id="R_ALCD19No2" name="alcohol_dehydrogenase__glycerol_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALCD19" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JF5" stoichiometry="0.0020276" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD19No3" sboTerm="SBO:0000176" id="R_ALCD19No3" name="alcohol_dehydrogenase__glycerol_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALCD19" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MF5" stoichiometry="1.2513e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALCD2x" sboTerm="SBO:0000176" id="R_arm_ALCD2x" name="alcohol_dehydrogenase__ethanol_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALCD2x" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3839"/> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD2xNo1" sboTerm="SBO:0000176" id="R_ALCD2xNo1" name="alcohol_dehydrogenase__ethanol_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALCD2x" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88G86" stoichiometry="4.3491e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3839"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD2xNo2" sboTerm="SBO:0000176" id="R_ALCD2xNo2" name="alcohol_dehydrogenase__ethanol_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MF5" stoichiometry="1.2513e-06" constant="true"/> <speciesReference species="M_pmet_ALCD2x" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCDppNo1" sboTerm="SBO:0000176" id="R_ALCDppNo1" name="alcohol_dehydrogenase__forward_rxn__ethanol___acetaldehyde_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JH5" stoichiometry="3.0637e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2674"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALDD1" sboTerm="SBO:0000176" id="R_arm_ALDD1" name="aldehyde_dehydrogenase__formaldehyde__NAD_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALDD1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0328"/> <fbc:geneProductRef fbc:geneProduct="PP_3970"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD1No1" sboTerm="SBO:0000176" id="R_ALDD1No1" name="aldehyde_dehydrogenase__formaldehyde__NAD_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALDD1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R06" stoichiometry="2.7663e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0328"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD1No2" sboTerm="SBO:0000176" id="R_ALDD1No2" name="aldehyde_dehydrogenase__formaldehyde__NAD_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALDD1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FV8" stoichiometry="2.7663e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3970"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALDD19xr" sboTerm="SBO:0000176" id="R_arm_ALDD19xr" name="aldehyde_dehydrogenase__phenylacetaldehyde__NAD_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pacald_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALDD19xr" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2680"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3463"/> <fbc:geneProductRef fbc:geneProduct="PP_3464"/> <fbc:geneProductRef fbc:geneProduct="PP_3465"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD19xrNo1" sboTerm="SBO:0000176" id="R_ALDD19xrNo1" name="aldehyde_dehydrogenase__phenylacetaldehyde__NAD_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALDD19xr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JG9" stoichiometry="5.5556e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2680"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD19xrNo2" sboTerm="SBO:0000176" id="R_ALDD19xrNo2" name="aldehyde_dehydrogenase__phenylacetaldehyde__NAD_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALDD19xr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H96" stoichiometry="2.8696e-06" constant="true"/> <speciesReference species="M_prot_Q88H97" stoichiometry="2.8696e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3463"/> <fbc:geneProductRef fbc:geneProduct="PP_3464"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALDD20x" sboTerm="SBO:0000176" id="R_arm_ALDD20x" name="aldehyde_dehydrogenase__indole_3_acetaldehyde__NAD_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_id3acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALDD20x" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD20xNo1" sboTerm="SBO:0000176" id="R_ALDD20xNo1" name="aldehyde_dehydrogenase__indole_3_acetaldehyde__NAD_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE9" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_ALDD20x" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_ind3ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD20xNo2" sboTerm="SBO:0000176" id="R_ALDD20xNo2" name="aldehyde_dehydrogenase__indole_3_acetaldehyde__NAD_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JF5" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_ALDD20x" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_ind3ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALDD2x" sboTerm="SBO:0000176" id="R_arm_ALDD2x" name="aldehyde_dehydrogenase__acetaldehyde__NAD_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALDD2x" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2589"/> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD2xNo1" sboTerm="SBO:0000176" id="R_ALDD2xNo1" name="aldehyde_dehydrogenase__acetaldehyde__NAD_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALDD2x" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JR0" stoichiometry="1.1574e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2589"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD2xNo2" sboTerm="SBO:0000176" id="R_ALDD2xNo2" name="aldehyde_dehydrogenase__acetaldehyde__NAD_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE9" stoichiometry="1.1574e-06" constant="true"/> <speciesReference species="M_pmet_ALDD2x" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD2xNo3" sboTerm="SBO:0000176" id="R_ALDD2xNo3" name="aldehyde_dehydrogenase__acetaldehyde__NAD_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JF5" stoichiometry="1.1574e-06" constant="true"/> <speciesReference species="M_pmet_ALDD2x" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALLTAMH" sboTerm="SBO:0000176" id="R_arm_ALLTAMH" name="allantoate_amidohydrolase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alltt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALLTAMH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3530"/> <fbc:geneProductRef fbc:geneProduct="PP_0614"/> <fbc:geneProductRef fbc:geneProduct="PP_4034"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTAMHNo1" sboTerm="SBO:0000176" id="R_ALLTAMHNo1" name="allantoate_amidohydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALLTAMH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H35" stoichiometry="3.7037e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="2" constant="true"/> <speciesReference species="M_urdglyc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3530"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTAMHNo2" sboTerm="SBO:0000176" id="R_ALLTAMHNo2" name="allantoate_amidohydrolase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALLTAMH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q81" stoichiometry="1.5432e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="2" constant="true"/> <speciesReference species="M_urdglyc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0614"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTAMHNo3" sboTerm="SBO:0000176" id="R_ALLTAMHNo3" name="allantoate_amidohydrolase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ALLTAMH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FQ3" stoichiometry="1.5432e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="2" constant="true"/> <speciesReference species="M_urdglyc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4034"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALLTNNo1" sboTerm="SBO:0000176" id="R_ALLTNNo1" name="allantoinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alltn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F13" stoichiometry="6.6138e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alltt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4286"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALTRHNo1" sboTerm="SBO:0000176" id="R_ALTRHNo1" name="altronate_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_altrn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88J15" stoichiometry="1.2626e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ddglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2834"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AM3PANo1" sboTerm="SBO:0000176" id="R_AM3PANo1" name="anhydrous_N_Acetylmuramyl_tripeptide_amidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhm3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PQ9" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0789"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AM4PANo1" sboTerm="SBO:0000176" id="R_AM4PANo1" name="anhydrous_N_Acetylmuramyl_tetrapeptide_amidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_anhm4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PQ9" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaDgluMdapDala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_anhm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0789"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMAOTrNo1" sboTerm="SBO:0000176" id="R_AMAOTrNo1" name="adenosylmethionine_8_amino_7_oxononanoate_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_8aonn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D44" stoichiometry="0.00027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dann_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4984"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMID4No1" sboTerm="SBO:0000176" id="R_AMID4No1" name="amidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88G79" stoichiometry="0.00010086" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3846"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPNNo1" sboTerm="SBO:0000176" id="R_AMPNNo1" name="AMP_nucleosidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DP5" stoichiometry="4.4803e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4779"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEAHNo1" sboTerm="SBO:0000176" id="R_AMPTASEAHNo1" name="aminopeptidase__Ala_His_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alahis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEALNo1" sboTerm="SBO:0000176" id="R_AMPTASEALNo1" name="aminopeptidase__Ala_Leu_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEATNo1" sboTerm="SBO:0000176" id="R_AMPTASEATNo1" name="aminopeptidase__Ala_Thr_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alathr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEATRPNo1" sboTerm="SBO:0000176" id="R_AMPTASEATRPNo1" name="aminopeptidase__Ala_Trp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alatrp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASECGNo1" sboTerm="SBO:0000176" id="R_AMPTASECGNo1" name="alanyl_aminopeptidase__cys_gly_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLYCNcNo1" sboTerm="SBO:0000176" id="R_GLYGLYCNcNo1" name="aminopeptidase__Gly_Gly_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glygly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEGGLNNo1" sboTerm="SBO:0000176" id="R_AMPTASEGGLNNo1" name="aminopeptidase__Gly_Gln_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glygln_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEGGLUNo1" sboTerm="SBO:0000176" id="R_AMPTASEGGLUNo1" name="aminopeptidase__Gly_Glu_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEGMNo1" sboTerm="SBO:0000176" id="R_AMPTASEGMNo1" name="aminopeptidase__Gly_Met_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glymet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYPHEHYcNo1" sboTerm="SBO:0000176" id="R_GLYPHEHYcNo1" name="aminopeptidase__Gly_Phe_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyphe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEGSNo1" sboTerm="SBO:0000176" id="R_AMPTASEGSNo1" name="aminopeptidase__Gly_Ser_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEHGNo1" sboTerm="SBO:0000176" id="R_AMPTASEHGNo1" name="aminopeptidase__His_Gly_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hisgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEHHNo1" sboTerm="SBO:0000176" id="R_AMPTASEHHNo1" name="aminopeptidase__His_His_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hishis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_his__L_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEULEULAPcNo1" sboTerm="SBO:0000176" id="R_LEULEULAPcNo1" name="aminopeptidase__LeuLeu_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leuleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_leu__L_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMPTASEPGNo1" sboTerm="SBO:0000176" id="R_AMPTASEPGNo1" name="aminopeptidase__pro_gly_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_progly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ANSNo1" sboTerm="SBO:0000176" id="R_ANSNo1" name="anthranilate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QR8" stoichiometry="7.2527e-07" constant="true"/> <speciesReference species="M_prot_Q88QS1" stoichiometry="7.2527e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anth_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0417"/> <fbc:geneProductRef fbc:geneProduct="PP_0420"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ANS2No1" sboTerm="SBO:0000176" id="R_ANS2No1" name="anthranilate_synthase_2 (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QR8" stoichiometry="7.2527e-07" constant="true"/> <speciesReference species="M_prot_Q88QS1" stoichiometry="7.2527e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anth_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0417"/> <fbc:geneProductRef fbc:geneProduct="PP_0420"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AP4ASNo1" sboTerm="SBO:0000176" id="R_AP4ASNo1" name="Ap4A_synthetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS4" stoichiometry="2.5602e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ap4a_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3279"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APATrNo1" sboTerm="SBO:0000176" id="R_APATrNo1" name="B_alanine_pyruvate_aminotransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q98" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_msa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APENTAMAH2No1" sboTerm="SBO:0000176" id="R_APENTAMAH2No1" name="5_aminopentanamide_amidohydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5apentam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QV2" stoichiometry="1.9135e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0382"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APRAURNo1" sboTerm="SBO:0000176" id="R_APRAURNo1" name="5_amino_6__5_phosphoribosylamino_uracil_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5apru_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH9" stoichiometry="2.01e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aprbu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0514"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ARGabcpp" sboTerm="SBO:0000176" id="R_arm_ARGabcpp" name="L_arginine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ARGabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGabcppNo1" sboTerm="SBO:0000176" id="R_ARGabcppNo1" name="L_arginine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ARGabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EH7" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EI0" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGabcppNo2" sboTerm="SBO:0000176" id="R_ARGabcppNo2" name="L_arginine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ARGabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NB2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB4" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB5" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGtexNo1" sboTerm="SBO:0000176" id="R_ARGtexNo1" name="L_arginine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NK1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1206"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AROHNo1" sboTerm="SBO:0000176" id="R_AROHNo1" name="L_Arogenate_hydro_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_Largn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M06" stoichiometry="7.5896e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1769"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARUHNo1" sboTerm="SBO:0000176" id="R_ARUHNo1" name="L_Arginine_pyruvate_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK0" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5g2oxpt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3721"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASADNo1" sboTerm="SBO:0000176" id="R_ASADNo1" name="aspartate_semialdehyde_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LE4" stoichiometry="8.4175e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4pasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1989"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ASNN" sboTerm="SBO:0000176" id="R_arm_ASNN" name="L_asparaginase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asn__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ASNN" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0495"/> <fbc:geneProductRef fbc:geneProduct="PP_1160"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASNNNo1" sboTerm="SBO:0000176" id="R_ASNNNo1" name="L_asparaginase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ASNN" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QJ6" stoichiometry="1.0365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0495"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASNNNo2" sboTerm="SBO:0000176" id="R_ASNNNo2" name="L_asparaginase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ASNN" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NP7" stoichiometry="1.0365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1160"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASNS1No1" sboTerm="SBO:0000176" id="R_ASNS1No1" name="asparagine_synthase__glutamine_hydrolysing_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M25" stoichiometry="4.7893e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asn__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1750"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPCTNo1" sboTerm="SBO:0000176" id="R_ASPCTNo1" name="aspartate_carbamoyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D29" stoichiometry="2.989e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cbasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4999"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPO1No1" sboTerm="SBO:0000176" id="R_ASPO1No1" name="L_aspartate_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MZ2" stoichiometry="2.6205e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1426"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPO3No1" sboTerm="SBO:0000176" id="R_ASPO3No1" name="L_aspartate_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MZ2" stoichiometry="2.6205e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1426"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPO5No1" sboTerm="SBO:0000176" id="R_ASPO5No1" name="L_aspartate_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MZ2" stoichiometry="0.00055556" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1426"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPO6No1" sboTerm="SBO:0000176" id="R_ASPO6No1" name="L_aspartate_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MZ2" stoichiometry="2.6205e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iasp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1426"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPSALyNo1" sboTerm="SBO:0000176" id="R_ASPSALyNo1" name="L_aspartate_semialdehyde_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EN2" stoichiometry="3.858e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4422"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPTNo1" sboTerm="SBO:0000176" id="R_ASPTNo1" name="L_aspartase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C45" stoichiometry="1.5432e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5338"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ASPTA" sboTerm="SBO:0000176" id="R_arm_ASPTA" name="aspartate_transaminase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ASPTA" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3721"/> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPTANo1" sboTerm="SBO:0000176" id="R_ASPTANo1" name="aspartate_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GK0" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_ASPTA" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3721"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPTANo2" sboTerm="SBO:0000176" id="R_ASPTANo2" name="aspartate_transaminase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ASPTA" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LG1" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ASPabcpp" sboTerm="SBO:0000176" id="R_arm_ASPabcpp" name="L_aspartate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ASPabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1071"/> <fbc:geneProductRef fbc:geneProduct="PP_1070"/> <fbc:geneProductRef fbc:geneProduct="PP_1068"/> <fbc:geneProductRef fbc:geneProduct="PP_1069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPabcppNo1" sboTerm="SBO:0000176" id="R_ASPabcppNo1" name="L_aspartate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88NB2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB4" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ASPabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPabcppNo2" sboTerm="SBO:0000176" id="R_ASPabcppNo2" name="L_aspartate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ASPabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NY2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NY3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NY4" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NY5" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1071"/> <fbc:geneProductRef fbc:geneProduct="PP_1070"/> <fbc:geneProductRef fbc:geneProduct="PP_1068"/> <fbc:geneProductRef fbc:geneProduct="PP_1069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ASR" sboTerm="SBO:0000176" id="R_arm_ASR" name="arsenate_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aso4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ASR" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1645"/> <fbc:geneProductRef fbc:geneProduct="PP_1928"/> <fbc:geneProductRef fbc:geneProduct="PP_2716"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASRNo1" sboTerm="SBO:0000176" id="R_ASRNo1" name="arsenate_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ASR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MC8" stoichiometry="0.00092593" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1645"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASRNo2" sboTerm="SBO:0000176" id="R_ASRNo2" name="arsenate_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ASR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LK3" stoichiometry="1.5023e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1928"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASRNo3" sboTerm="SBO:0000176" id="R_ASRNo3" name="arsenate_reductase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ASR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JD3" stoichiometry="1.5023e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2716"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASTNo1" sboTerm="SBO:0000176" id="R_ASTNo1" name="Arginine_succinyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EI2" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_prot_Q88EI3" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucarg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4479"/> <fbc:geneProductRef fbc:geneProduct="PP_4480"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ATHRDHrNo1" sboTerm="SBO:0000176" id="R_ATHRDHrNo1" name="L_allo_threonine_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_athr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DG3" stoichiometry="4.8225e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2aobut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4862"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BACCLNo1" sboTerm="SBO:0000176" id="R_BACCLNo1" name="biotin_acetyl_CoA_carboxylase_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_btn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QQ1" stoichiometry="6.1728e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0437"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BALAALAabcpp" sboTerm="SBO:0000176" id="R_arm_BALAALAabcpp" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BALAALAabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAALAabcppNo1" sboTerm="SBO:0000176" id="R_BALAALAabcppNo1" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALAALAabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAALAabcppNo2" sboTerm="SBO:0000176" id="R_BALAALAabcppNo2" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALAALAabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAALAabcppNo3" sboTerm="SBO:0000176" id="R_BALAALAabcppNo3" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALAALAabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAALAtexNo1" sboTerm="SBO:0000176" id="R_BALAALAtexNo1" name="beta_alanyl_L_alanine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balaala_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balaala_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BALABALAabcpp" sboTerm="SBO:0000176" id="R_arm_BALABALAabcpp" name="beta_alanyl_beta_alanine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balabala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BALABALAabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALABALAabcppNo1" sboTerm="SBO:0000176" id="R_BALABALAabcppNo1" name="beta_alanyl_beta_alanine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALABALAabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balabala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALABALAabcppNo2" sboTerm="SBO:0000176" id="R_BALABALAabcppNo2" name="beta_alanyl_beta_alanine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALABALAabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balabala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALABALAabcppNo3" sboTerm="SBO:0000176" id="R_BALABALAabcppNo3" name="beta_alanyl_beta_alanine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALABALAabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balabala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALABALAtexNo1" sboTerm="SBO:0000176" id="R_BALABALAtexNo1" name="beta_alanyl_beta_alanine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balabala_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balabala_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BALAGLYabcpp" sboTerm="SBO:0000176" id="R_arm_BALAGLYabcpp" name="beta_alanyl_L_glycine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balagly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BALAGLYabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAGLYabcppNo1" sboTerm="SBO:0000176" id="R_BALAGLYabcppNo1" name="beta_alanyl_L_glycine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALAGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balagly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAGLYabcppNo2" sboTerm="SBO:0000176" id="R_BALAGLYabcppNo2" name="beta_alanyl_L_glycine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALAGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balagly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAGLYabcppNo3" sboTerm="SBO:0000176" id="R_BALAGLYabcppNo3" name="beta_alanyl_L_glycine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALAGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balagly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAGLYtexNo1" sboTerm="SBO:0000176" id="R_BALAGLYtexNo1" name="beta_alanyl_L_glycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balagly_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balagly_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BALALEUabcpp" sboTerm="SBO:0000176" id="R_arm_BALALEUabcpp" name="beta_alanyl_L_leucine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaleu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BALALEUabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALALEUabcppNo1" sboTerm="SBO:0000176" id="R_BALALEUabcppNo1" name="beta_alanyl_L_leucine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALALEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALALEUabcppNo2" sboTerm="SBO:0000176" id="R_BALALEUabcppNo2" name="beta_alanyl_L_leucine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALALEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALALEUabcppNo3" sboTerm="SBO:0000176" id="R_BALALEUabcppNo3" name="beta_alanyl_L_leucine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BALALEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balaleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALALEUtexNo1" sboTerm="SBO:0000176" id="R_BALALEUtexNo1" name="L_Histidinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balaleu_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balaleu_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BALAMDAH" sboTerm="SBO:0000176" id="R_arm_BALAMDAH" name="beta_Alaninamide_amidohydrolase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balamd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BALAMDAH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3846"/> <fbc:geneProductRef fbc:geneProduct="PP_3844"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAMDAHNo1" sboTerm="SBO:0000176" id="R_BALAMDAHNo1" name="beta_Alaninamide_amidohydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88G79" stoichiometry="0.00010086" constant="true"/> <speciesReference species="M_pmet_BALAMDAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3846"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAMDAHNo2" sboTerm="SBO:0000176" id="R_BALAMDAHNo2" name="beta_Alaninamide_amidohydrolase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_BALAMDAH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88G81" stoichiometry="0.00010086" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3844"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BDHNo1" sboTerm="SBO:0000176" id="R_BDHNo1" name="_R__3_HydroxybutanoateNAD_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IC6" stoichiometry="2.01e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3073"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BGLAppNo1" sboTerm="SBO:0000176" id="R_BGLAppNo1" name="beta_glucosidase__periplasmic__ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cellb_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N13" stoichiometry="7.8027e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glc__D_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1403"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BLAMDabcpp" sboTerm="SBO:0000176" id="R_arm_BLAMDabcpp" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balamd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BLAMDabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BLAMDabcppNo1" sboTerm="SBO:0000176" id="R_BLAMDabcppNo1" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BLAMDabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balamd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BLAMDabcppNo2" sboTerm="SBO:0000176" id="R_BLAMDabcppNo2" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BLAMDabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balamd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BLAMDabcppNo3" sboTerm="SBO:0000176" id="R_BLAMDabcppNo3" name="beta_alanyl_L_alanine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_BLAMDabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_balamd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BLAMDtexNo1" sboTerm="SBO:0000176" id="R_BLAMDtexNo1" name="beta_Alaninamide_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balamd_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balamd_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BLUBNo1" sboTerm="SBO:0000176" id="R_BLUBNo1" name="cobalamin_biosynthesis (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA0" stoichiometry="0.015432" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmbzid_c" stoichiometry="1" constant="true"/> <speciesReference species="M_doxopa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1674"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BMOCOSNo1" sboTerm="SBO:0000176" id="R_BMOCOSNo1" name="bis_molybdenum_cofactor_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_moco_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mptamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L14" stoichiometry="0.00011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_bmoco_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2123"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BPNTNo1" sboTerm="SBO:0000176" id="R_BPNTNo1" name="3__5__bisphosphate_nucleotidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R73" stoichiometry="1.2626e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0261"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BTDD_RRNo1" sboTerm="SBO:0000176" id="R_BTDD_RRNo1" name="_R_R__butanediol_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_btd_RR_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE2" stoichiometry="1.8519e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0552"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BUP" sboTerm="SBO:0000176" id="R_arm_BUP" name="beta_ureidopropionase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3uib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BUP" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0614"/> <fbc:geneProductRef fbc:geneProduct="PP_4034"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BUPNo1" sboTerm="SBO:0000176" id="R_BUPNo1" name="beta_ureidopropionase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88Q81" stoichiometry="0.19493" constant="true"/> <speciesReference species="M_pmet_BUP" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3aib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0614"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BUPNo2" sboTerm="SBO:0000176" id="R_BUPNo2" name="beta_ureidopropionase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FQ3" stoichiometry="0.19493" constant="true"/> <speciesReference species="M_pmet_BUP" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3aib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4034"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_BUTSO3abcpp" sboTerm="SBO:0000176" id="R_arm_BUTSO3abcpp" name="butanesulfonate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_butso3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_BUTSO3abcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BUTSO3abcppNo1" sboTerm="SBO:0000176" id="R_BUTSO3abcppNo1" name="butanesulfonate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_BUTSO3abcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_butso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BUTSO3abcppNo2" sboTerm="SBO:0000176" id="R_BUTSO3abcppNo2" name="butanesulfonate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_BUTSO3abcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_butso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BUTSO3texNo1" sboTerm="SBO:0000176" id="R_BUTSO3texNo1" name="butanesulfonate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_butso3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_butso3_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BWCOSNo1" sboTerm="SBO:0000176" id="R_BWCOSNo1" name="tungsten_bispterin_cofactor_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_mptamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_wco_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L14" stoichiometry="0.00011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_bwco_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2123"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BZ12DOXNo1" sboTerm="SBO:0000176" id="R_BZ12DOXNo1" name="benzoate_1_2_dioxygenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I38" stoichiometry="7.5689e-07" constant="true"/> <speciesReference species="M_prot_Q88I39" stoichiometry="7.5689e-07" constant="true"/> <speciesReference species="M_prot_Q88I40" stoichiometry="7.5689e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bz12diol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3161"/> <fbc:geneProductRef fbc:geneProduct="PP_3162"/> <fbc:geneProductRef fbc:geneProduct="PP_3163"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BZDIOLDHNo1" sboTerm="SBO:0000176" id="R_BZDIOLDHNo1" name="1_2_dihydrodihydroxybenzoate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_bz12diol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I37" stoichiometry="1.7005e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3164"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CACOAHANo1" sboTerm="SBO:0000176" id="R_CACOAHANo1" name="Enoyl_CoA_hydratasealdolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_caffcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HJ8" stoichiometry="7.4671e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3358"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CAFFCOANo1" sboTerm="SBO:0000176" id="R_CAFFCOANo1" name="feruloyl_coenzyme_A_synthetase__AMP_forming_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_34dhcinm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HK0" stoichiometry="5.144e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_caffcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3356"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CARNabcpp" sboTerm="SBO:0000176" id="R_arm_CARNabcpp" name="Carnosine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_carn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CARNabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CARNabcppNo1" sboTerm="SBO:0000176" id="R_CARNabcppNo1" name="Carnosine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_CARNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_carn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CARNabcppNo2" sboTerm="SBO:0000176" id="R_CARNabcppNo2" name="Carnosine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_CARNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_carn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CARNabcppNo3" sboTerm="SBO:0000176" id="R_CARNabcppNo3" name="Carnosine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_CARNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_carn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CARNtexNo1" sboTerm="SBO:0000176" id="R_CARNtexNo1" name="L_Carnosine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_carn_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_carn_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CATNo1" sboTerm="SBO:0000176" id="R_CATNo1" name="catalase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88RL4" stoichiometry="1.0893e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0115"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CATDOX" sboTerm="SBO:0000176" id="R_arm_CATDOX" name="catechol_1_2_dioxygenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CATDOX" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3166"/> <fbc:geneProductRef fbc:geneProduct="PP_3713"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CATDOXNo1" sboTerm="SBO:0000176" id="R_CATDOXNo1" name="catechol_1_2_dioxygenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CATDOX" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I35" stoichiometry="5.144e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ccmuac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3166"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CATDOXNo2" sboTerm="SBO:0000176" id="R_CATDOXNo2" name="catechol_1_2_dioxygenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CATDOX" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK8" stoichiometry="5.144e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ccmuac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3713"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CATpp" sboTerm="SBO:0000176" id="R_arm_CATpp" name="catalase__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o2_p" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CATpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0481"/> <fbc:geneProductRef fbc:geneProduct="PP_2887"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CATppNo1" sboTerm="SBO:0000176" id="R_CATppNo1" name="catalase__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CATpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QK9" stoichiometry="1.0893e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0481"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CATppNo2" sboTerm="SBO:0000176" id="R_CATppNo2" name="catalase__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CATpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IW2" stoichiometry="2.613e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2887"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBIATNo1" sboTerm="SBO:0000176" id="R_CBIATNo1" name="Cobinamide_adenyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA2" stoichiometry="0.0092593" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1672"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBLATNo1" sboTerm="SBO:0000176" id="R_CBLATNo1" name="cob_I_alamin_adenosyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbl1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA2" stoichiometry="0.0092593" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adocbl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1672"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CD2abcppNo1" sboTerm="SBO:0000176" id="R_CD2abcppNo1" name="Cadmium__Cd2__ABC_transporter__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cd2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CP1" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cd2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5139"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CDGSNo1" sboTerm="SBO:0000176" id="R_CDGSNo1" name="7_deaza_7_carboxyguanine_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cph4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NI4" stoichiometry="5.144e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1225"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CELASEppNo1" sboTerm="SBO:0000176" id="R_CELASEppNo1" name="Endo_1_4_D_glucanase_cellolose_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cell4_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JL2" stoichiometry="5.2312e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cellb_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2637"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CELLSNo1" sboTerm="SBO:0000176" id="R_CELLSNo1" name="cellulose_synthase__UDP_forming_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpg_c" stoichiometry="4" constant="true"/> <speciesReference species="M_prot_Q88JL1" stoichiometry="0.00015221" constant="true"/> <speciesReference species="M_prot_Q88JL3" stoichiometry="0.00015221" constant="true"/> <speciesReference species="M_prot_Q88JL4" stoichiometry="0.00015221" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cell4_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="4" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2635"/> <fbc:geneProductRef fbc:geneProduct="PP_2636"/> <fbc:geneProductRef fbc:geneProduct="PP_2638"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CFAS160E" sboTerm="SBO:0000176" id="R_arm_CFAS160E" name="cyclopropane_fatty_acid_synthase__Phosphatidylethanolamine__n_C160_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pe161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CFAS160E" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2734"/> <fbc:geneProductRef fbc:geneProduct="PP_5365"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CFAS160ENo1" sboTerm="SBO:0000176" id="R_CFAS160ENo1" name="cyclopropane_fatty_acid_synthase__Phosphatidylethanolamine__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CFAS160E" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JB5" stoichiometry="2.7778e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cpe160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2734"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CFAS160ENo2" sboTerm="SBO:0000176" id="R_CFAS160ENo2" name="cyclopropane_fatty_acid_synthase__Phosphatidylethanolamine__n_C160_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CFAS160E" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C18" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cpe160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5365"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CFAS160G" sboTerm="SBO:0000176" id="R_arm_CFAS160G" name="cyclopropane_fatty_acid_synthase__Phosphatidylglycerol__n_C160_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pg161_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CFAS160G" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2734"/> <fbc:geneProductRef fbc:geneProduct="PP_5365"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CFAS160GNo1" sboTerm="SBO:0000176" id="R_CFAS160GNo1" name="cyclopropane_fatty_acid_synthase__Phosphatidylglycerol__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JB5" stoichiometry="2.7778e-06" constant="true"/> <speciesReference species="M_pmet_CFAS160G" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cpg160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2734"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CFAS160GNo2" sboTerm="SBO:0000176" id="R_CFAS160GNo2" name="cyclopropane_fatty_acid_synthase__Phosphatidylglycerol__n_C160_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C18" stoichiometry="7.3099e-06" constant="true"/> <speciesReference species="M_pmet_CFAS160G" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cpg160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5365"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CFAS180ENo1" sboTerm="SBO:0000176" id="R_CFAS180ENo1" name="cyclopropane_fatty_acid_synthase__Phosphatidylethanolamine__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pe181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JB5" stoichiometry="2.7778e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cpe180_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2734"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CFAS180GNo1" sboTerm="SBO:0000176" id="R_CFAS180GNo1" name="cyclopropane_fatty_acid_synthase__Phosphatidylglycerol__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pg181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JB5" stoichiometry="2.7778e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cpg180_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2734"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CGLYabcpp" sboTerm="SBO:0000176" id="R_arm_CGLYabcpp" name="L_Cysteinylglycine__Cys_Gly__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cgly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CGLYabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CGLYabcppNo1" sboTerm="SBO:0000176" id="R_CGLYabcppNo1" name="L_Cysteinylglycine__Cys_Gly__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_CGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CGLYabcppNo2" sboTerm="SBO:0000176" id="R_CGLYabcppNo2" name="L_Cysteinylglycine__Cys_Gly__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_CGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CGLYabcppNo3" sboTerm="SBO:0000176" id="R_CGLYabcppNo3" name="L_Cysteinylglycine__Cys_Gly__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_CGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CGLYtexNo1" sboTerm="SBO:0000176" id="R_CGLYtexNo1" name="L_Cysteinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cgly_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CHLabcpp" sboTerm="SBO:0000176" id="R_arm_CHLabcpp" name="choline_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_chol_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CHLabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> <fbc:geneProductRef fbc:geneProduct="PP_0296"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHLabcppNo1" sboTerm="SBO:0000176" id="R_CHLabcppNo1" name="choline_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CHLabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PI1" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88PI2" stoichiometry="0.0011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHLabcppNo2" sboTerm="SBO:0000176" id="R_CHLabcppNo2" name="choline_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CHLabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PH9" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88PI0" stoichiometry="0.0011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHLabcppNo3" sboTerm="SBO:0000176" id="R_CHLabcppNo3" name="choline_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CHLabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R38" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R39" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R40" stoichiometry="0.0011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> <fbc:geneProductRef fbc:geneProduct="PP_0296"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHOLSHNo1" sboTerm="SBO:0000176" id="R_CHOLSHNo1" name="choline_sulphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_chols_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RQ2" stoichiometry="0.0003635" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0077"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHORMNo1" sboTerm="SBO:0000176" id="R_CHORMNo1" name="chorismate_mutase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M06" stoichiometry="7.5896e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1769"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CITtex" sboTerm="SBO:0000176" id="R_arm_CITtex" name="citrate_transport_via_diffusion__extracellular_to_periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cit_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CITtex" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CITtexNo1" sboTerm="SBO:0000176" id="R_CITtexNo1" name="citrate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MZ9" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_CITtex" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CITtexNo2" sboTerm="SBO:0000176" id="R_CITtexNo2" name="citrate_transport_via_diffusion__extracellular_to_periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L77" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_CITtex" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS120ppNo1" sboTerm="SBO:0000176" id="R_CLPNS120ppNo1" name="cardiolipin_synthase__periplasmic__n_C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg120_p" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS140ppNo1" sboTerm="SBO:0000176" id="R_CLPNS140ppNo1" name="cardiolipin_synthase__periplasmic__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg140_p" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS141ppNo1" sboTerm="SBO:0000176" id="R_CLPNS141ppNo1" name="cardiolipin_synthase__periplasmic__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg141_p" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS160ppNo1" sboTerm="SBO:0000176" id="R_CLPNS160ppNo1" name="cardiolipin_synthase__periplasmic__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg160_p" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS161ppNo1" sboTerm="SBO:0000176" id="R_CLPNS161ppNo1" name="cardiolipin_synthase__periplasmic__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg161_p" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS180ppNo1" sboTerm="SBO:0000176" id="R_CLPNS180ppNo1" name="cardiolipin_synthase__periplasmic__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg180_p" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS181ppNo1" sboTerm="SBO:0000176" id="R_CLPNS181ppNo1" name="cardiolipin_synthase__periplasmic__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg181_p" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CMT2No1" sboTerm="SBO:0000176" id="R_CMT2No1" name="_cytosine_5___methyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_csn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FU3" stoichiometry="0.04085" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5mcsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3989"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_COALCDHNo1" sboTerm="SBO:0000176" id="R_COALCDHNo1" name="coniferyl_alcohol_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_confrl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K65" stoichiometry="1.0767e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_conialdh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2426"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_COBGNo1" sboTerm="SBO:0000176" id="R_COBGNo1" name="Precorrin_3B_synthase__CobG_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre3a_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DJ6" stoichiometry="0.0069444" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre3b_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4829"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_COCHLNo1" sboTerm="SBO:0000176" id="R_COCHLNo1" name="cobaltochelatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cobalt2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hgbam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H58" stoichiometry="0.041459" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2dam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3507"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_COCOAHANo1" sboTerm="SBO:0000176" id="R_COCOAHANo1" name="Enoyl_CoA_hydratasealdolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coucoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HJ8" stoichiometry="7.4671e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3358"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CPH4SNo1" sboTerm="SBO:0000176" id="R_CPH4SNo1" name="6_carboxy_5_6_7_8_tetrahydropterin_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ahdt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KE9" stoichiometry="3.5162e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cph4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2341"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CPPPGO2No1" sboTerm="SBO:0000176" id="R_CPPPGO2No1" name="Oxygen_Independent_coproporphyrinogen_III_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_cpppg3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F35" stoichiometry="3.0864e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_dad_5_c" stoichiometry="2" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pppg9_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CREATNo1" sboTerm="SBO:0000176" id="R_CREATNo1" name="Creatinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_creat_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GQ1" stoichiometry="0.0011292" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_sarcs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3667"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CRNabcpp" sboTerm="SBO:0000176" id="R_arm_CRNabcpp" name="L_carnitine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_crn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CRNabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0304"/> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRNabcppNo1" sboTerm="SBO:0000176" id="R_CRNabcppNo1" name="L_carnitine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PI1" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88PI2" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_pmet_CRNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRNabcppNo2" sboTerm="SBO:0000176" id="R_CRNabcppNo2" name="L_carnitine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PH9" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88PI0" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_pmet_CRNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRNabcppNo3" sboTerm="SBO:0000176" id="R_CRNabcppNo3" name="L_carnitine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R39" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R40" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_pmet_CRNabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R30" stoichiometry="0.0011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0304"/> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CRTNIHNo1" sboTerm="SBO:0000176" id="R_CRTNIHNo1" name="Creatinine_iminohydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_crtn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I13" stoichiometry="4.9603e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mthd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CSNDNo1" sboTerm="SBO:0000176" id="R_CSNDNo1" name="Cytosine_deaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_csn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I13" stoichiometry="1.5015e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CSPMDDCNo1" sboTerm="SBO:0000176" id="R_CSPMDDCNo1" name="carboxynorspermidine_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cspmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IS0" stoichiometry="8.6806e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_spmd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2929"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CU2abcppNo1" sboTerm="SBO:0000176" id="R_CU2abcppNo1" name="Copper__Cu2__ABC_transporter__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QA8" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cu2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0586"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CYANST" sboTerm="SBO:0000176" id="R_arm_CYANST" name="Cyanide_sulfurtransferase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tsul_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CYANST" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0398"/> <fbc:geneProductRef fbc:geneProduct="PP_4907"/> <fbc:geneProductRef fbc:geneProduct="PP_5118"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYANSTNo1" sboTerm="SBO:0000176" id="R_CYANSTNo1" name="Cyanide_sulfurtransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CYANST" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DC0" stoichiometry="2.4582e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4907"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYANSTNo2" sboTerm="SBO:0000176" id="R_CYANSTNo2" name="Cyanide_sulfurtransferase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CYANST" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CR2" stoichiometry="2.4582e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5118"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYO1_KTNo1" sboTerm="SBO:0000176" id="R_CYO1_KTNo1" name="ubiquinol___cytochrome_c_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N93" stoichiometry="3.6743e-10" constant="true"/> <speciesReference species="M_prot_Q88N94" stoichiometry="3.6743e-10" constant="true"/> <speciesReference species="M_prot_Q88N95" stoichiometry="3.6743e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_focytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1317"/> <fbc:geneProductRef fbc:geneProduct="PP_1318"/> <fbc:geneProductRef fbc:geneProduct="PP_1319"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYRDAATNo1" sboTerm="SBO:0000176" id="R_CYRDAATNo1" name="cob_I_yrinic_acid_a_c_diamide_adenosyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co1dam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA2" stoichiometry="0.0092593" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adcobdam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1672"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYRDARNo1" sboTerm="SBO:0000176" id="R_CYRDARNo1" name="cob_II_yrinic_acid_a_c_diamide_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_co2dam_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA0" stoichiometry="0.015432" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co1dam_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1674"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CYSS" sboTerm="SBO:0000176" id="R_arm_CYSS" name="cysteine_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CYSS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4571"/> <fbc:geneProductRef fbc:geneProduct="PP_1654"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYSSNo1" sboTerm="SBO:0000176" id="R_CYSSNo1" name="cysteine_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CYSS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E95" stoichiometry="3.7896e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4571"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYSSNo2" sboTerm="SBO:0000176" id="R_CYSSNo2" name="cysteine_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CYSS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MC0" stoichiometry="3.7896e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1654"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SLCYSSNo1" sboTerm="SBO:0000176" id="R_SLCYSSNo1" name="cysteine_synthase__S_sulfo_L_cysteine_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tsul_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MC0" stoichiometry="0.0003858" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_scys__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1654"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTBO3_4ppNo1" sboTerm="SBO:0000176" id="R_CYTBO3_4ppNo1" name="cytochrome_oxidase_bo3__ubiquinol_8_4_protons___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PN4" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88PN5" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88PN6" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88PN7" stoichiometry="2.0425e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="4" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0812"/> <fbc:geneProductRef fbc:geneProduct="PP_0813"/> <fbc:geneProductRef fbc:geneProduct="PP_0814"/> <fbc:geneProductRef fbc:geneProduct="PP_0815"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTCAA3ppNo1" sboTerm="SBO:0000176" id="R_CYTCAA3ppNo1" name="cytochrome_c_oxidase_aa3__2_protons1_electron____periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_focytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> <speciesReference species="M_prot_Q88RM3" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88RM4" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88RM5" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88RM6" stoichiometry="2.0425e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0103"/> <fbc:geneProductRef fbc:geneProduct="PP_0104"/> <fbc:geneProductRef fbc:geneProduct="PP_0105"/> <fbc:geneProductRef fbc:geneProduct="PP_0106"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CYTCBB3pp" sboTerm="SBO:0000176" id="R_arm_CYTCBB3pp" name="cytochrome_c_oxidase_bb3__05_protons1_electron____periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_focytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CYTCBB3pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4250"/> <fbc:geneProductRef fbc:geneProduct="PP_4251"/> <fbc:geneProductRef fbc:geneProduct="PP_4252"/> <fbc:geneProductRef fbc:geneProduct="PP_4253"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4255"/> <fbc:geneProductRef fbc:geneProduct="PP_4256"/> <fbc:geneProductRef fbc:geneProduct="PP_4257"/> <fbc:geneProductRef fbc:geneProduct="PP_4258"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTCBB3ppNo1" sboTerm="SBO:0000176" id="R_CYTCBB3ppNo1" name="cytochrome_c_oxidase_bb3__05_protons1_electron____periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CYTCBB3pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F46" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88F47" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88F48" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88F49" stoichiometry="2.0425e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4250"/> <fbc:geneProductRef fbc:geneProduct="PP_4251"/> <fbc:geneProductRef fbc:geneProduct="PP_4252"/> <fbc:geneProductRef fbc:geneProduct="PP_4253"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTCBB3ppNo2" sboTerm="SBO:0000176" id="R_CYTCBB3ppNo2" name="cytochrome_c_oxidase_bb3__05_protons1_electron____periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_CYTCBB3pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F41" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88F42" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88F43" stoichiometry="2.0425e-06" constant="true"/> <speciesReference species="M_prot_Q88F44" stoichiometry="2.0425e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4255"/> <fbc:geneProductRef fbc:geneProduct="PP_4256"/> <fbc:geneProductRef fbc:geneProduct="PP_4257"/> <fbc:geneProductRef fbc:geneProduct="PP_4258"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CYTDHNo1" sboTerm="SBO:0000176" id="R_CYTDHNo1" name="Cytidine_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cytd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K32" stoichiometry="2.3946e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_csn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2460"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAAD11No1" sboTerm="SBO:0000176" id="R_DAAD11No1" name="D_Amino_acid_dehydrogenase__tyr_D_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAAD12No1" sboTerm="SBO:0000176" id="R_DAAD12No1" name="D_Amino_acid_dehydrogenase__val_D_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAAD2No1" sboTerm="SBO:0000176" id="R_DAAD2No1" name="D_Amino_acid_dehydrogenase__arg_D_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_arg__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5g2oxpt_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAAD3No1" sboTerm="SBO:0000176" id="R_DAAD3No1" name="D_Amino_acid_dehydrogenase__leu_D_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAAD4No1" sboTerm="SBO:0000176" id="R_DAAD4No1" name="D_Amino_acid_dehydrogenase__D_met_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_met__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2kmb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAAD5No1" sboTerm="SBO:0000176" id="R_DAAD5No1" name="D_Amino_acid_dehydrogenase__orn_D_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5a2opntn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAAD6No1" sboTerm="SBO:0000176" id="R_DAAD6No1" name="D_Amino_acid_dehydrogenase__phe_D_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DAAD7No1" sboTerm="SBO:0000176" id="R_DAAD7No1" name="D_Amino_acid_dehydrogenase__pro_D_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1p2cbxl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_arm_DABAAT2" sboTerm="SBO:0000176" id="R_arm_DABAAT2" name="DABA_aminotransferase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_24dab_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DABAAT2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2800"/> <fbc:geneProductRef fbc:geneProduct="PP_4223"/> <fbc:geneProductRef fbc:geneProduct="PP_4421"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DABAAT2No1" sboTerm="SBO:0000176" id="R_DABAAT2No1" name="DABA_aminotransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DABAAT2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88J49" stoichiometry="2.3148e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2800"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DABAAT2No2" sboTerm="SBO:0000176" id="R_DABAAT2No2" name="DABA_aminotransferase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DABAAT2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F75" stoichiometry="2.3148e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4223"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DABAAT2No3" sboTerm="SBO:0000176" id="R_DABAAT2No3" name="DABA_aminotransferase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DABAAT2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EN3" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4421"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAGK120" sboTerm="SBO:0000176" id="R_arm_DAGK120" name="diacylglycerol_kinase__n_C120_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_12dgr120_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAGK120" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK120No1" sboTerm="SBO:0000176" id="R_DAGK120No1" name="diacylglycerol_kinase__n_C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DAGK120" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MD7" stoichiometry="1.2077e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK120No2" sboTerm="SBO:0000176" id="R_DAGK120No2" name="diacylglycerol_kinase__n_C120_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DAGK120" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IM6" stoichiometry="1.2077e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAGK140" sboTerm="SBO:0000176" id="R_arm_DAGK140" name="diacylglycerol_kinase__n_C140_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_12dgr140_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAGK140" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK140No1" sboTerm="SBO:0000176" id="R_DAGK140No1" name="diacylglycerol_kinase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD7" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK140No2" sboTerm="SBO:0000176" id="R_DAGK140No2" name="diacylglycerol_kinase__n_C140_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IM6" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAGK141" sboTerm="SBO:0000176" id="R_arm_DAGK141" name="diacylglycerol_kinase__n_C141_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_12dgr141_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAGK141" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK141No1" sboTerm="SBO:0000176" id="R_DAGK141No1" name="diacylglycerol_kinase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IM6" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK141No2" sboTerm="SBO:0000176" id="R_DAGK141No2" name="diacylglycerol_kinase__n_C141_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD7" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAGK160" sboTerm="SBO:0000176" id="R_arm_DAGK160" name="diacylglycerol_kinase__n_C160_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_12dgr160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAGK160" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> <fbc:geneProductRef fbc:geneProduct="PP_2125"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK160No1" sboTerm="SBO:0000176" id="R_DAGK160No1" name="diacylglycerol_kinase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD7" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK160No2" sboTerm="SBO:0000176" id="R_DAGK160No2" name="diacylglycerol_kinase__n_C160_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IM6" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAGK161" sboTerm="SBO:0000176" id="R_arm_DAGK161" name="diacylglycerol_kinase__n_C161_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_12dgr161_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAGK161" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK161No1" sboTerm="SBO:0000176" id="R_DAGK161No1" name="diacylglycerol_kinase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD7" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK161No2" sboTerm="SBO:0000176" id="R_DAGK161No2" name="diacylglycerol_kinase__n_C161_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IM6" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAGK180" sboTerm="SBO:0000176" id="R_arm_DAGK180" name="diacylglycerol_kinase__n_C180_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_12dgr180_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAGK180" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK180No1" sboTerm="SBO:0000176" id="R_DAGK180No1" name="diacylglycerol_kinase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD7" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK180No2" sboTerm="SBO:0000176" id="R_DAGK180No2" name="diacylglycerol_kinase__n_C180_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IM6" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAGK181" sboTerm="SBO:0000176" id="R_arm_DAGK181" name="diacylglycerol_kinase__n_C181_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAGK181" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK181No1" sboTerm="SBO:0000176" id="R_DAGK181No1" name="diacylglycerol_kinase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD7" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAGK181No2" sboTerm="SBO:0000176" id="R_DAGK181No2" name="diacylglycerol_kinase__n_C181_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IM6" stoichiometry="1.2077e-05" constant="true"/> <speciesReference species="M_pmet_DAGK181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2973"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DAPDC" sboTerm="SBO:0000176" id="R_arm_DAPDC" name="diaminopimelate_decarboxylase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_26dap__M_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DAPDC" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5227"/> <fbc:geneProductRef fbc:geneProduct="PP_2077"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAPDCNo1" sboTerm="SBO:0000176" id="R_DAPDCNo1" name="diaminopimelate_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DAPDC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CF4" stoichiometry="1.7749e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5227"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAPDCNo2" sboTerm="SBO:0000176" id="R_DAPDCNo2" name="diaminopimelate_decarboxylase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DAPDC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L58" stoichiometry="1.7749e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2077"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAPENo1" sboTerm="SBO:0000176" id="R_DAPENo1" name="diaminopimelate_epimerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_26dap_LL_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GD4" stoichiometry="2.1701e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_26dap__M_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3790"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DASYN120No1" sboTerm="SBO:0000176" id="R_DASYN120No1" name="CDP_diacylglycerol_synthetase__n_C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MH5" stoichiometry="3.1141e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdpdddecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DASYN140No1" sboTerm="SBO:0000176" id="R_DASYN140No1" name="CDP_diacylglycerol_synthetase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MH5" stoichiometry="3.1141e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdpdtdecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DASYN141No1" sboTerm="SBO:0000176" id="R_DASYN141No1" name="CDP_diacylglycerol_synthetase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MH5" stoichiometry="3.1141e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdpdtdec7eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DASYN160No1" sboTerm="SBO:0000176" id="R_DASYN160No1" name="CDP_diacylglycerol_synthetase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MH5" stoichiometry="3.1141e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdpdhdecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DASYN161No1" sboTerm="SBO:0000176" id="R_DASYN161No1" name="CDP_diacylglycerol_synthetase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MH5" stoichiometry="3.1141e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdpdhdec9eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DASYN180No1" sboTerm="SBO:0000176" id="R_DASYN180No1" name="CDP_diacylglycerol_synthetase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MH5" stoichiometry="3.1141e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdpdodecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DASYN181No1" sboTerm="SBO:0000176" id="R_DASYN181No1" name="CDP_diacylglycerol_synthetase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MH5" stoichiometry="3.1141e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cdpdodec11eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DB4PS" sboTerm="SBO:0000176" id="R_arm_DB4PS" name="3_4_Dihydroxy_2_butanone_4_phosphate_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DB4PS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3813"/> <fbc:geneProductRef fbc:geneProduct="PP_0530"/> <fbc:geneProductRef fbc:geneProduct="PP_0516"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DB4PSNo1" sboTerm="SBO:0000176" id="R_DB4PSNo1" name="3_4_Dihydroxy_2_butanone_4_phosphate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DB4PS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GB1" stoichiometry="0.002333" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_db4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3813"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DB4PSNo2" sboTerm="SBO:0000176" id="R_DB4PSNo2" name="3_4_Dihydroxy_2_butanone_4_phosphate_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DB4PS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH7" stoichiometry="0.002333" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_db4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0516"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DBTSNo1" sboTerm="SBO:0000176" id="R_DBTSNo1" name="dethiobiotin_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dann_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QW8" stoichiometry="0.19841" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dtbt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="3" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0366"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DDGLKNo1" sboTerm="SBO:0000176" id="R_DDGLKNo1" name="2_dehydro_3_deoxygluconokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2ddglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HH9" stoichiometry="8.4175e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ddg6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3378"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DDPA" sboTerm="SBO:0000176" id="R_arm_DDPA" name="3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DDPA" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3080"/> <fbc:geneProductRef fbc:geneProduct="PP_2324"/> <fbc:geneProductRef fbc:geneProduct="PP_1866"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DDPANo1" sboTerm="SBO:0000176" id="R_DDPANo1" name="3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DDPA" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IB9" stoichiometry="2.2769e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dda7p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3080"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DDPANo2" sboTerm="SBO:0000176" id="R_DDPANo2" name="3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DDPA" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KG6" stoichiometry="2.2769e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dda7p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2324"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DDPANo3" sboTerm="SBO:0000176" id="R_DDPANo3" name="3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DDPA" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LR3" stoichiometry="2.2769e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dda7p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1866"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DESATPE160No1" sboTerm="SBO:0000176" id="R_DESATPE160No1" name="PE160_desaturase__pe_C160__pe_C161d9_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pe160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RB6" stoichiometry="9.9562e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="4" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pe161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DESATPG160No1" sboTerm="SBO:0000176" id="R_DESATPG160No1" name="PG160_desaturase__pg_C160__pg_C161d9_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pg160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RB6" stoichiometry="9.9562e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="4" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pg161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHACOAHNo1" sboTerm="SBO:0000176" id="R_DHACOAHNo1" name="2_3_dehydroadipyl_CoA_hydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_23dhacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HR9" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hadpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHDPSNo1" sboTerm="SBO:0000176" id="R_DHDPSNo1" name="dihydrodipicolinate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NH2" stoichiometry="5.9737e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_23dhdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1237"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHFRNo1" sboTerm="SBO:0000176" id="R_DHFRNo1" name="dihydrofolate_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CP8" stoichiometry="1.7806e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5132"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHFSNo1" sboTerm="SBO:0000176" id="R_DHFSNo1" name="dihydrofolate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LD8" stoichiometry="0.022878" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1997"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHMPTRNo1" sboTerm="SBO:0000176" id="R_DHMPTRNo1" name="Dihydromonapterin_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E36" stoichiometry="1.7806e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmnp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4632"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHMPTRxNo1" sboTerm="SBO:0000176" id="R_DHMPTRxNo1" name="Dihydromonapterin_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K59" stoichiometry="1.3889e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmnp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2432"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHNPA_1No1" sboTerm="SBO:0000176" id="R_DHNPA_1No1" name="dihydroneopterin_aldolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhnpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QU4" stoichiometry="0.0031211" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ahhmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gcald_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0392"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHNPTENo1" sboTerm="SBO:0000176" id="R_DHNPTENo1" name="Dihydroneopterin_epimerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhnpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QU4" stoichiometry="0.0031211" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0392"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHPM1No1" sboTerm="SBO:0000176" id="R_DHPM1No1" name="dihydropyrimidinase__5_6_dihydrouracil_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_56dura_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FWK2" stoichiometry="1.1957e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4036"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHPM2No1" sboTerm="SBO:0000176" id="R_DHPM2No1" name="dihydropyrimidinase__dihydrothymine_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_56dthm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FWK2" stoichiometry="1.1957e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3uib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4036"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHPPDA2No1" sboTerm="SBO:0000176" id="R_DHPPDA2No1" name="diaminohydroxyphosphoribosylaminopryrimidine_deaminase__25drapp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_25drapp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH9" stoichiometry="2.01e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5apru_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0514"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHPSNo1" sboTerm="SBO:0000176" id="R_DHPSNo1" name="dihydropteroate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2ahhmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4abz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DV2" stoichiometry="0.0022347" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4717"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHQDNo1" sboTerm="SBO:0000176" id="R_DHQDNo1" name="3_dehydroquinate_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IJ6" stoichiometry="8.9606e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DKGLCNR3No1" sboTerm="SBO:0000176" id="R_DKGLCNR3No1" name="2_5_diketo_D_gluconate_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_25dkglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KC2" stoichiometry="3.4294e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DLYSAD" sboTerm="SBO:0000176" id="R_arm_DLYSAD" name="D_Amino_acid_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DLYSAD" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3596"/> <fbc:geneProductRef fbc:geneProduct="PP_5270"/> <fbc:geneProductRef fbc:geneProduct="PP_4434"/> <fbc:geneProductRef fbc:geneProduct="PP_2246"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSADNo1" sboTerm="SBO:0000176" id="R_DLYSADNo1" name="D_Amino_acid_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DLYSAD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX1" stoichiometry="2.6205e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSADNo2" sboTerm="SBO:0000176" id="R_DLYSADNo2" name="D_Amino_acid_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KP4" stoichiometry="5.0505e-07" constant="true"/> <speciesReference species="M_pmet_DLYSAD" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_DLYSOXGATNo1" sboTerm="SBO:0000176" id="R_DLYSOXGATNo1" name="D_Lysine2_oxoglutarate_aminotransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSPYRATNo1" sboTerm="SBO:0000176" id="R_DLYSPYRATNo1" name="D_Lysinepyruvate_aminotransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DLYSabcpp" sboTerm="SBO:0000176" id="R_arm_DLYSabcpp" name="D_lysine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__D_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DLYSabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0280"/> <fbc:geneProductRef fbc:geneProduct="PP_0281"/> <fbc:geneProductRef fbc:geneProduct="PP_0282"/> <fbc:geneProductRef fbc:geneProduct="PP_0283"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3593"/> <fbc:geneProductRef fbc:geneProduct="PP_3594"/> <fbc:geneProductRef fbc:geneProduct="PP_3595"/> <fbc:geneProductRef fbc:geneProduct="PP_3597"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSabcppNo1" sboTerm="SBO:0000176" id="R_DLYSabcppNo1" name="D_lysine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DLYSabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R51" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R52" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R53" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R54" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0280"/> <fbc:geneProductRef fbc:geneProduct="PP_0281"/> <fbc:geneProductRef fbc:geneProduct="PP_0282"/> <fbc:geneProductRef fbc:geneProduct="PP_0283"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSabcppNo2" sboTerm="SBO:0000176" id="R_DLYSabcppNo2" name="D_lysine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EH7" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EI0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_DLYSabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSabcppNo3" sboTerm="SBO:0000176" id="R_DLYSabcppNo3" name="D_lysine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DLYSabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GX2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GX3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GX4" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3593"/> <fbc:geneProductRef fbc:geneProduct="PP_3594"/> <fbc:geneProductRef fbc:geneProduct="PP_3595"/> <fbc:geneProductRef fbc:geneProduct="PP_3597"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYStexNo1" sboTerm="SBO:0000176" id="R_DLYStexNo1" name="D_lysine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lys__D_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NK1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lys__D_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1206"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMATTNo1" sboTerm="SBO:0000176" id="R_DMATTNo1" name="dimethylallyltranstransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dmpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ipdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QG6" stoichiometry="0.00025253" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_grdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0528"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMGDH2No1" sboTerm="SBO:0000176" id="R_DMGDH2No1" name="dimethylglycine_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dmgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R18" stoichiometry="2.9869e-07" constant="true"/> <speciesReference species="M_prot_Q88R19" stoichiometry="2.9869e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sarcs_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0315"/> <fbc:geneProductRef fbc:geneProduct="PP_0316"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMGLYBabcppNo1" sboTerm="SBO:0000176" id="R_DMGLYBabcppNo1" name="Glycine_betaine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dmgly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R38" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R39" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R40" stoichiometry="0.0011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dmgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> <fbc:geneProductRef fbc:geneProduct="PP_0296"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DMSO2abcpp" sboTerm="SBO:0000176" id="R_arm_DMSO2abcpp" name="dimethyl_sulfone_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dmso2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DMSO2abcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMSO2abcppNo1" sboTerm="SBO:0000176" id="R_DMSO2abcppNo1" name="dimethyl_sulfone_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_DMSO2abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dmso2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMSO2abcppNo2" sboTerm="SBO:0000176" id="R_DMSO2abcppNo2" name="dimethyl_sulfone_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_DMSO2abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dmso2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMSO2texNo1" sboTerm="SBO:0000176" id="R_DMSO2texNo1" name="dimethyl_sulfone_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dmso2_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmso2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DOPDH" sboTerm="SBO:0000176" id="R_arm_DOPDH" name="ketoglutarate_semialdehyde_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_25dop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DOPDH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3602"/> <fbc:geneProductRef fbc:geneProduct="PP_1256"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DOPDHNo1" sboTerm="SBO:0000176" id="R_DOPDHNo1" name="ketoglutarate_semialdehyde_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DOPDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GW5" stoichiometry="1.41e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3602"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DOPDHNo2" sboTerm="SBO:0000176" id="R_DOPDHNo2" name="ketoglutarate_semialdehyde_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DOPDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NF5" stoichiometry="1.41e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1256"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DORNabcppNo1" sboTerm="SBO:0000176" id="R_DORNabcppNo1" name="D_Ornithine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R51" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R52" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R53" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R54" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0280"/> <fbc:geneProductRef fbc:geneProduct="PP_0281"/> <fbc:geneProductRef fbc:geneProduct="PP_0282"/> <fbc:geneProductRef fbc:geneProduct="PP_0283"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DPR" sboTerm="SBO:0000176" id="R_arm_DPR" name="2_dehydropantoate_2_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2dhp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DPR" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2998"/> <fbc:geneProductRef fbc:geneProduct="PP_1351"/> <fbc:geneProductRef fbc:geneProduct="PP_2325"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DPRNo1" sboTerm="SBO:0000176" id="R_DPRNo1" name="2_dehydropantoate_2_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DPR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IK1" stoichiometry="6.9444e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pant__R_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2998"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DPRNo2" sboTerm="SBO:0000176" id="R_DPRNo2" name="2_dehydropantoate_2_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DPR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N64" stoichiometry="6.9444e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pant__R_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1351"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DPRNo3" sboTerm="SBO:0000176" id="R_DPRNo3" name="2_dehydropantoate_2_reductase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DPR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KG5" stoichiometry="6.9444e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pant__R_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2325"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DSBDR" sboTerm="SBO:0000176" id="R_arm_DSBDR" name="DsbD_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dsbdox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DSBDR" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBDRNo1" sboTerm="SBO:0000176" id="R_DSBDRNo1" name="DsbD_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DSBDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CG6" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_prot_Q88QD3" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBDRNo2" sboTerm="SBO:0000176" id="R_DSBDRNo2" name="DsbD_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DSBDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QD3" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_prot_Q88QI2" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBDRNo3" sboTerm="SBO:0000176" id="R_DSBDRNo3" name="DsbD_reductase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DSBDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QD3" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_prot_Q88CW1" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBDRNo4" sboTerm="SBO:0000176" id="R_DSBDRNo4" name="DsbD_reductase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DSBDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CG6" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_prot_Q88F64" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBDRNo5" sboTerm="SBO:0000176" id="R_DSBDRNo5" name="DsbD_reductase (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DSBDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QI2" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_prot_Q88F64" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DSBDRNo6" sboTerm="SBO:0000176" id="R_DSBDRNo6" name="DsbD_reductase (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_DSBDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CW1" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_prot_Q88F64" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DURADNo1" sboTerm="SBO:0000176" id="R_DURADNo1" name="dihydrouracil_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_56dura_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FQ0" stoichiometry="0.00017361" constant="true"/> <speciesReference species="M_prot_Q88FQ1" stoichiometry="0.00017361" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4038"/> <fbc:geneProductRef fbc:geneProduct="PP_4037"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DURAD2No1" sboTerm="SBO:0000176" id="R_DURAD2No1" name="dihydrothymin_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_56dthm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FQ0" stoichiometry="0.00017361" constant="true"/> <speciesReference species="M_prot_Q88FQ1" stoichiometry="0.00017361" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thym_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4038"/> <fbc:geneProductRef fbc:geneProduct="PP_4037"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_E4PDNo1" sboTerm="SBO:0000176" id="R_E4PDNo1" name="Erythrose_4_phosphate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D63" stoichiometry="1.3889e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4per_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4964"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH1No1" sboTerm="SBO:0000176" id="R_ECOAH1No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxybutanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH14No1" sboTerm="SBO:0000176" id="R_ECOAH14No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyheptanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hp2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH15No1" sboTerm="SBO:0000176" id="R_ECOAH15No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxynonanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hnonacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH16No1" sboTerm="SBO:0000176" id="R_ECOAH16No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenyldecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdca2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hpdecacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH17No1" sboTerm="SBO:0000176" id="R_ECOAH17No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylnonanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnona2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hpnonacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH18No1" sboTerm="SBO:0000176" id="R_ECOAH18No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenyloctanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pocta2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hpoctacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH19No1" sboTerm="SBO:0000176" id="R_ECOAH19No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylheptanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_php2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hphpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH2" sboTerm="SBO:0000176" id="R_arm_ECOAH2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH2No1" sboTerm="SBO:0000176" id="R_ECOAH2No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH2No2" sboTerm="SBO:0000176" id="R_ECOAH2No2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ECOAH2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH20No1" sboTerm="SBO:0000176" id="R_ECOAH20No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylhexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxa2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hphxacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH21No1" sboTerm="SBO:0000176" id="R_ECOAH21No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylpentanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppt2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hpptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH22No1" sboTerm="SBO:0000176" id="R_ECOAH22No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylbutyryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hpbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH23No1" sboTerm="SBO:0000176" id="R_ECOAH23No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy_6_acetylthiohexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6ath2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3h6athcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH24No1" sboTerm="SBO:0000176" id="R_ECOAH24No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy_4_acetylthiobutanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4atb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3h4atbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH25No1" sboTerm="SBO:0000176" id="R_ECOAH25No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__11Z__octadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hvacccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH26No1" sboTerm="SBO:0000176" id="R_ECOAH26No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__9Z__hexadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH27No1" sboTerm="SBO:0000176" id="R_ECOAH27No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__7Z__tetradecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3htdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tde2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH28No1" sboTerm="SBO:0000176" id="R_ECOAH28No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__5Z__dodedecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hddccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH29No1" sboTerm="SBO:0000176" id="R_ECOAH29No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__9Z__octadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hodecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ode2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH3" sboTerm="SBO:0000176" id="R_arm_ECOAH3" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hocoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH3No1" sboTerm="SBO:0000176" id="R_ECOAH3No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH3No2" sboTerm="SBO:0000176" id="R_ECOAH3No2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH30No1" sboTerm="SBO:0000176" id="R_ECOAH30No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__7Z__hexadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdd7coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd7_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH31No1" sboTerm="SBO:0000176" id="R_ECOAH31No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__5Z__tetradecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH32No1" sboTerm="SBO:0000176" id="R_ECOAH32No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__6Z__octadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hptslacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptsla2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH33No1" sboTerm="SBO:0000176" id="R_ECOAH33No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__4Z__hexadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdd4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd4_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH34No1" sboTerm="SBO:0000176" id="R_ECOAH34No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__9Z_12Z__octadec_dienyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hlnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH35No1" sboTerm="SBO:0000176" id="R_ECOAH35No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__7Z_10Z__hexadec_dienyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhd710coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd710_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH36No1" sboTerm="SBO:0000176" id="R_ECOAH36No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__5Z_8Z__tetradec_dienyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td58_2_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH37No1" sboTerm="SBO:0000176" id="R_ECOAH37No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__6Z__dodedecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd6_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH38No1" sboTerm="SBO:0000176" id="R_ECOAH38No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__4Z__decenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dec4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH4" sboTerm="SBO:0000176" id="R_arm_ECOAH4" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH4No1" sboTerm="SBO:0000176" id="R_ECOAH4No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH4" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH4No2" sboTerm="SBO:0000176" id="R_ECOAH4No2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH4" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH5" sboTerm="SBO:0000176" id="R_arm_ECOAH5" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydodecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hddcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH5No1" sboTerm="SBO:0000176" id="R_ECOAH5No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydodecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH5" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH5No2" sboTerm="SBO:0000176" id="R_ECOAH5No2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydodecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH5" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH6" sboTerm="SBO:0000176" id="R_arm_ECOAH6" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxytetradecanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3htdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH6No1" sboTerm="SBO:0000176" id="R_ECOAH6No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxytetradecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH6" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH6No2" sboTerm="SBO:0000176" id="R_ECOAH6No2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxytetradecanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH6" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH7No1" sboTerm="SBO:0000176" id="R_ECOAH7No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexadecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH8No1" sboTerm="SBO:0000176" id="R_ECOAH8No1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctadecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hodcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_od2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDANo1" sboTerm="SBO:0000176" id="R_EDANo1" name="2_dehydro_3_deoxy_phosphogluconate_aldolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2ddg6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P29" stoichiometry="7.0146e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1024"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDDNo1" sboTerm="SBO:0000176" id="R_EDDNo1" name="6_phosphogluconate_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P43" stoichiometry="1.3228e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ddg6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1010"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_EDTXS1_kt" sboTerm="SBO:0000176" id="R_arm_EDTXS1_kt" name="Endotoxin_Synthesis__lauroyl_transferase_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdo2lipid4_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_EDTXS1_kt" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS1_ktNo1" sboTerm="SBO:0000176" id="R_EDTXS1_ktNo1" name="Endotoxin_Synthesis__lauroyl_transferase_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_EDTXS1_kt" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M40" stoichiometry="2.1204e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdo2lipid4L_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS1_ktNo2" sboTerm="SBO:0000176" id="R_EDTXS1_ktNo2" name="Endotoxin_Synthesis__lauroyl_transferase_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_EDTXS1_kt" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RR6" stoichiometry="2.1204e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdo2lipid4L_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_EDTXS2_kt" sboTerm="SBO:0000176" id="R_arm_EDTXS2_kt" name="Endotoxin_Synthesis__myristoyl_transferase_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdo2lipid4L_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_EDTXS2_kt" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS2_ktNo1" sboTerm="SBO:0000176" id="R_EDTXS2_ktNo1" name="Endotoxin_Synthesis__myristoyl_transferase_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RR6" stoichiometry="2.1204e-06" constant="true"/> <speciesReference species="M_pmet_EDTXS2_kt" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipa_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS2_ktNo2" sboTerm="SBO:0000176" id="R_EDTXS2_ktNo2" name="Endotoxin_Synthesis__myristoyl_transferase_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88M40" stoichiometry="2.1204e-06" constant="true"/> <speciesReference species="M_pmet_EDTXS2_kt" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipa_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_EDTXS5_kt" sboTerm="SBO:0000176" id="R_arm_EDTXS5_kt" name="Endotoxin_Synthesis__lauroyl_transferase_kdo_independent_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipidA_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_EDTXS5_kt" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS5_ktNo1" sboTerm="SBO:0000176" id="R_EDTXS5_ktNo1" name="Endotoxin_Synthesis__lauroyl_transferase_kdo_independent_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RR6" stoichiometry="2.1204e-06" constant="true"/> <speciesReference species="M_pmet_EDTXS5_kt" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipid4L_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS5_ktNo2" sboTerm="SBO:0000176" id="R_EDTXS5_ktNo2" name="Endotoxin_Synthesis__lauroyl_transferase_kdo_independent_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88M40" stoichiometry="2.1204e-06" constant="true"/> <speciesReference species="M_pmet_EDTXS5_kt" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipid4L_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_EDTXS6_kt" sboTerm="SBO:0000176" id="R_arm_EDTXS6_kt" name="Endotoxin_Synthesis__myristoyl_transferase__2__kdo_independent_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipid4L_kt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_EDTXS6_kt" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS6_ktNo1" sboTerm="SBO:0000176" id="R_EDTXS6_ktNo1" name="Endotoxin_Synthesis__myristoyl_transferase__2__kdo_independent_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RR6" stoichiometry="2.1204e-06" constant="true"/> <speciesReference species="M_pmet_EDTXS6_kt" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipa2_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_EDTXS6_ktNo2" sboTerm="SBO:0000176" id="R_EDTXS6_ktNo2" name="Endotoxin_Synthesis__myristoyl_transferase__2__kdo_independent_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88M40" stoichiometry="2.1204e-06" constant="true"/> <speciesReference species="M_pmet_EDTXS6_kt" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipa2_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHAALNo1" sboTerm="SBO:0000176" id="R_ETHAALNo1" name="Ethanolamine_ammonia_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_etha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QF1" stoichiometry="3.6075e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0543"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ETHSO3abcpp" sboTerm="SBO:0000176" id="R_arm_ETHSO3abcpp" name="ethanesulfonate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ethso3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ETHSO3abcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHSO3abcppNo1" sboTerm="SBO:0000176" id="R_ETHSO3abcppNo1" name="ethanesulfonate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ETHSO3abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ethso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHSO3abcppNo2" sboTerm="SBO:0000176" id="R_ETHSO3abcppNo2" name="ethanesulfonate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ETHSO3abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ethso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHSO3texNo1" sboTerm="SBO:0000176" id="R_ETHSO3texNo1" name="ethanesulfonate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ethso3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ethso3_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HMR_0180" sboTerm="SBO:0000176" id="R_arm_HMR_0180" name="fatty_acid__CoA_ligase__decanoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HMR_0180" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMR_0180No1" sboTerm="SBO:0000176" id="R_HMR_0180No1" name="fatty_acid__CoA_ligase__decanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_HMR_0180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMR_0180No2" sboTerm="SBO:0000176" id="R_HMR_0180No2" name="fatty_acid__CoA_ligase__decanoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_HMR_0180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL100t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL100t2pp" name="fatty_acid_CoA_ligase__decanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dca_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL100t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL100t2ppNo1" name="fatty_acid_CoA_ligase__decanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL100t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL100t2ppNo2" name="fatty_acid_CoA_ligase__decanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL100t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL100t2ppNo3" name="fatty_acid_CoA_ligase__decanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FACOAL100t2pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HMR_0188" sboTerm="SBO:0000176" id="R_arm_HMR_0188" name="fatty_acid__CoA_ligase__dodecanoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HMR_0188" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMR_0188No1" sboTerm="SBO:0000176" id="R_HMR_0188No1" name="fatty_acid__CoA_ligase__dodecanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_HMR_0188" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMR_0188No2" sboTerm="SBO:0000176" id="R_HMR_0188No2" name="fatty_acid__CoA_ligase__dodecanoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_HMR_0188" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL120t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL120t2pp" name="fatty_acid_CoA_ligase__dodecanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddca_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL120t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL120t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL120t2ppNo1" name="fatty_acid_CoA_ligase__dodecanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL120t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL120t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL120t2ppNo2" name="fatty_acid_CoA_ligase__dodecanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL120t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL120t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL120t2ppNo3" name="fatty_acid_CoA_ligase__dodecanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL120t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL140" sboTerm="SBO:0000176" id="R_arm_FACOAL140" name="fatty_acid__CoA_ligase__tetradecanoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL140" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL140No1" sboTerm="SBO:0000176" id="R_FACOAL140No1" name="fatty_acid__CoA_ligase__tetradecanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL140No2" sboTerm="SBO:0000176" id="R_FACOAL140No2" name="fatty_acid__CoA_ligase__tetradecanoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL140t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL140t2pp" name="fatty_acid_CoA_ligase__tetradecanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL140t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL140t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL140t2ppNo1" name="fatty_acid_CoA_ligase__tetradecanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL140t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL140t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL140t2ppNo2" name="fatty_acid_CoA_ligase__tetradecanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL140t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL140t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL140t2ppNo3" name="fatty_acid_CoA_ligase__tetradecanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL140t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL141" sboTerm="SBO:0000176" id="R_arm_FACOAL141" name="fatty_acid__CoA_ligase__tetradecenoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdcea_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL141" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL141No1" sboTerm="SBO:0000176" id="R_FACOAL141No1" name="fatty_acid__CoA_ligase__tetradecenoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL141No2" sboTerm="SBO:0000176" id="R_FACOAL141No2" name="fatty_acid__CoA_ligase__tetradecenoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL141t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL141t2pp" name="fatty_acid_CoA_ligase__tetradecenoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ttdcea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL141t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL141t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL141t2ppNo1" name="fatty_acid_CoA_ligase__tetradecenoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL141t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL141t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL141t2ppNo2" name="fatty_acid_CoA_ligase__tetradecenoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL141t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL141t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL141t2ppNo3" name="fatty_acid_CoA_ligase__tetradecenoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL141t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL160" sboTerm="SBO:0000176" id="R_arm_FACOAL160" name="C160_fatty_acid_activation (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL160" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL160No1" sboTerm="SBO:0000176" id="R_FACOAL160No1" name="C160_fatty_acid_activation (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL160No2" sboTerm="SBO:0000176" id="R_FACOAL160No2" name="C160_fatty_acid_activation (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL160t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL160t2pp" name="fatty_acid_CoA_ligase__hexadecanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL160t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL160t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL160t2ppNo1" name="fatty_acid_CoA_ligase__hexadecanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL160t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL160t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL160t2ppNo2" name="fatty_acid_CoA_ligase__hexadecanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL160t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL160t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL160t2ppNo3" name="fatty_acid_CoA_ligase__hexadecanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL160t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL161" sboTerm="SBO:0000176" id="R_arm_FACOAL161" name="fatty_acid__CoA_ligase__hexadecenoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL161" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL161No1" sboTerm="SBO:0000176" id="R_FACOAL161No1" name="fatty_acid__CoA_ligase__hexadecenoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL161No2" sboTerm="SBO:0000176" id="R_FACOAL161No2" name="fatty_acid__CoA_ligase__hexadecenoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL161t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL161t2pp" name="fatty_acid_CoA_ligase__hexadecenoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL161t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL161t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL161t2ppNo1" name="fatty_acid_CoA_ligase__hexadecenoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL161t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL161t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL161t2ppNo2" name="fatty_acid_CoA_ligase__hexadecenoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL161t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL161t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL161t2ppNo3" name="fatty_acid_CoA_ligase__hexadecenoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL161t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL180" sboTerm="SBO:0000176" id="R_arm_FACOAL180" name="C180_fatty_acid_activation (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL180" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL180No1" sboTerm="SBO:0000176" id="R_FACOAL180No1" name="C180_fatty_acid_activation (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL180No2" sboTerm="SBO:0000176" id="R_FACOAL180No2" name="C180_fatty_acid_activation (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL180t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL180t2pp" name="fatty_acid_CoA_ligase__octadecanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL180t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL180t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL180t2ppNo1" name="fatty_acid_CoA_ligase__octadecanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL180t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL180t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL180t2ppNo2" name="fatty_acid_CoA_ligase__octadecanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL180t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL180t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL180t2ppNo3" name="fatty_acid_CoA_ligase__octadecanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL180t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL1812" sboTerm="SBO:0000176" id="R_arm_FACOAL1812" name="fatty_acid__CoA_ligase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL1812" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL1812No1" sboTerm="SBO:0000176" id="R_FACOAL1812No1" name="fatty_acid__CoA_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL1812" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL1812No2" sboTerm="SBO:0000176" id="R_FACOAL1812No2" name="fatty_acid__CoA_ligase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL1812" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL181d11tpp" sboTerm="SBO:0000176" id="R_arm_FACOAL181d11tpp" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL181d11tpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181d11tppNo1" sboTerm="SBO:0000176" id="R_FACOAL181d11tppNo1" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181d11tpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181d11tppNo2" sboTerm="SBO:0000176" id="R_FACOAL181d11tppNo2" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181d11tpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181d11tppNo3" sboTerm="SBO:0000176" id="R_FACOAL181d11tppNo3" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL181d11tpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL181d6t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL181d6t2pp" name="fatty_acid_CoA_ligase__petroselenic_acid_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ptsla_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL181d6t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181d6t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL181d6t2ppNo1" name="fatty_acid_CoA_ligase__petroselenic_acid_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181d6t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptslacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181d6t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL181d6t2ppNo2" name="fatty_acid_CoA_ligase__petroselenic_acid_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181d6t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptslacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181d6t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL181d6t2ppNo3" name="fatty_acid_CoA_ligase__petroselenic_acid_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL181d6t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptslacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL181" sboTerm="SBO:0000176" id="R_arm_FACOAL181" name="C181_fatty_acid_activation (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcea_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL181" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181No1" sboTerm="SBO:0000176" id="R_FACOAL181No1" name="C181_fatty_acid_activation (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181No2" sboTerm="SBO:0000176" id="R_FACOAL181No2" name="C181_fatty_acid_activation (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL181t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL181t2pp" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL181t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL181t2ppNo1" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL181t2ppNo2" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL181t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL181t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL181t2ppNo3" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL181t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL1821" sboTerm="SBO:0000176" id="R_arm_FACOAL1821" name="fatty_acid__CoA_ligase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL1821" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL1821No1" sboTerm="SBO:0000176" id="R_FACOAL1821No1" name="fatty_acid__CoA_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL1821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL1821No2" sboTerm="SBO:0000176" id="R_FACOAL1821No2" name="fatty_acid__CoA_ligase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL1821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL182t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL182t2pp" name="fatty_acid_CoA_ligase__linoleic_acid_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL182t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL182t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL182t2ppNo1" name="fatty_acid_CoA_ligase__linoleic_acid_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL182t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL182t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL182t2ppNo2" name="fatty_acid_CoA_ligase__linoleic_acid_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL182t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL182t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL182t2ppNo3" name="fatty_acid_CoA_ligase__linoleic_acid_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL182t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL50i" sboTerm="SBO:0000176" id="R_arm_FACOAL50i" name="fatty_acid__CoA_ligase__pentanoate (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pta_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL50i" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL50iNo1" sboTerm="SBO:0000176" id="R_FACOAL50iNo1" name="fatty_acid__CoA_ligase__pentanoate (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL50i" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL50iNo2" sboTerm="SBO:0000176" id="R_FACOAL50iNo2" name="fatty_acid__CoA_ligase__pentanoate (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL50i" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL50t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL50t2pp" name="fatty_acid__CoA_ligase__pentanoate__valerate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL50t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL50t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL50t2ppNo1" name="fatty_acid__CoA_ligase__pentanoate__valerate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL50t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL50t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL50t2ppNo2" name="fatty_acid__CoA_ligase__pentanoate__valerate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL50t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL50t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL50t2ppNo3" name="fatty_acid__CoA_ligase__pentanoate__valerate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL50t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL60i" sboTerm="SBO:0000176" id="R_arm_FACOAL60i" name="fatty_acid__CoA_ligase__hexanoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL60i" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL60iNo1" sboTerm="SBO:0000176" id="R_FACOAL60iNo1" name="fatty_acid__CoA_ligase__hexanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL60i" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL60iNo2" sboTerm="SBO:0000176" id="R_FACOAL60iNo2" name="fatty_acid__CoA_ligase__hexanoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL60i" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL60t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL60t2pp" name="fatty_acid_CoA_ligase__hexanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hxa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL60t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL60t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL60t2ppNo1" name="fatty_acid_CoA_ligase__hexanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL60t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL60t2ppNo2" name="fatty_acid_CoA_ligase__hexanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL60t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL60t2ppNo3" name="fatty_acid_CoA_ligase__hexanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL_70_c" sboTerm="SBO:0000176" id="R_arm_FACOAL_70_c" name="fatty_acid__CoA_ligase__heptanoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpta_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL_70_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL_70_cNo1" sboTerm="SBO:0000176" id="R_FACOAL_70_cNo1" name="fatty_acid__CoA_ligase__heptanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL_70_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL_70_cNo2" sboTerm="SBO:0000176" id="R_FACOAL_70_cNo2" name="fatty_acid__CoA_ligase__heptanoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL_70_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL70t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL70t2pp" name="fatty_acid__CoA_ligase__heptanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hpta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL70t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL70t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL70t2ppNo1" name="fatty_acid__CoA_ligase__heptanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL70t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL70t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL70t2ppNo2" name="fatty_acid__CoA_ligase__heptanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL70t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL70t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL70t2ppNo3" name="fatty_acid__CoA_ligase__heptanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL70t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL80" sboTerm="SBO:0000176" id="R_arm_FACOAL80" name="fatty_acid__CoA_ligase__octanoate_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_octa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL80" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL80No1" sboTerm="SBO:0000176" id="R_FACOAL80No1" name="fatty_acid__CoA_ligase__octanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL80No2" sboTerm="SBO:0000176" id="R_FACOAL80No2" name="fatty_acid__CoA_ligase__octanoate_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL80t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL80t2pp" name="fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_octa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL80t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL80t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL80t2ppNo1" name="fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL80t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL80t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL80t2ppNo2" name="fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL80t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL80t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL80t2ppNo3" name="fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL80t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL90i" sboTerm="SBO:0000176" id="R_arm_FACOAL90i" name="fatty_acid__CoA_ligase__nonanoic_acid_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL90i" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL90iNo1" sboTerm="SBO:0000176" id="R_FACOAL90iNo1" name="fatty_acid__CoA_ligase__nonanoic_acid_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL90i" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL90iNo2" sboTerm="SBO:0000176" id="R_FACOAL90iNo2" name="fatty_acid__CoA_ligase__nonanoic_acid_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL90i" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL90t2pp" sboTerm="SBO:0000176" id="R_arm_FACOAL90t2pp" name="fatty_acid__CoA_ligase__nonanoic_acid_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_nona_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL90t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL90t2ppNo1" sboTerm="SBO:0000176" id="R_FACOAL90t2ppNo1" name="fatty_acid__CoA_ligase__nonanoic_acid_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOAL90t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL90t2ppNo2" sboTerm="SBO:0000176" id="R_FACOAL90t2ppNo2" name="fatty_acid__CoA_ligase__nonanoic_acid_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL90t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL90t2ppNo3" sboTerm="SBO:0000176" id="R_FACOAL90t2ppNo3" name="fatty_acid__CoA_ligase__nonanoic_acid_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL90t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOALP100t2pp" sboTerm="SBO:0000176" id="R_arm_FACOALP100t2pp" name="fatty_acid__CoA_ligase__Phenyl_decanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phedca_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOALP100t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP100t2ppNo1" sboTerm="SBO:0000176" id="R_FACOALP100t2ppNo1" name="fatty_acid__CoA_ligase__Phenyl_decanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP100t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP100t2ppNo2" sboTerm="SBO:0000176" id="R_FACOALP100t2ppNo2" name="fatty_acid__CoA_ligase__Phenyl_decanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP100t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP100t2ppNo3" sboTerm="SBO:0000176" id="R_FACOALP100t2ppNo3" name="fatty_acid__CoA_ligase__Phenyl_decanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOALP100t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOALP50t2pp" sboTerm="SBO:0000176" id="R_arm_FACOALP50t2pp" name="fatty_acid__CoA_ligase__Phenyl_pentanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phept_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOALP50t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP50t2ppNo1" sboTerm="SBO:0000176" id="R_FACOALP50t2ppNo1" name="fatty_acid__CoA_ligase__Phenyl_pentanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP50t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP50t2ppNo2" sboTerm="SBO:0000176" id="R_FACOALP50t2ppNo2" name="fatty_acid__CoA_ligase__Phenyl_pentanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP50t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP50t2ppNo3" sboTerm="SBO:0000176" id="R_FACOALP50t2ppNo3" name="fatty_acid__CoA_ligase__Phenyl_pentanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOALP50t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOALP60t2pp" sboTerm="SBO:0000176" id="R_arm_FACOALP60t2pp" name="fatty_acid__CoA_ligase__Phenyl_hexanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phehxa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOALP60t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP60t2ppNo1" sboTerm="SBO:0000176" id="R_FACOALP60t2ppNo1" name="fatty_acid__CoA_ligase__Phenyl_hexanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP60t2ppNo2" sboTerm="SBO:0000176" id="R_FACOALP60t2ppNo2" name="fatty_acid__CoA_ligase__Phenyl_hexanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP60t2ppNo3" sboTerm="SBO:0000176" id="R_FACOALP60t2ppNo3" name="fatty_acid__CoA_ligase__Phenyl_hexanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOALP60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOALP70t2pp" sboTerm="SBO:0000176" id="R_arm_FACOALP70t2pp" name="fatty_acid__CoA_ligase__Phenyl_heptanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phehpa_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOALP70t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP70t2ppNo1" sboTerm="SBO:0000176" id="R_FACOALP70t2ppNo1" name="fatty_acid__CoA_ligase__Phenyl_heptanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP70t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP70t2ppNo2" sboTerm="SBO:0000176" id="R_FACOALP70t2ppNo2" name="fatty_acid__CoA_ligase__Phenyl_heptanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP70t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP70t2ppNo3" sboTerm="SBO:0000176" id="R_FACOALP70t2ppNo3" name="fatty_acid__CoA_ligase__Phenyl_heptanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOALP70t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOALP80t2pp" sboTerm="SBO:0000176" id="R_arm_FACOALP80t2pp" name="fatty_acid__CoA_ligase__Phenyl_octanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pheocta_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOALP80t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP80t2ppNo1" sboTerm="SBO:0000176" id="R_FACOALP80t2ppNo1" name="fatty_acid__CoA_ligase__Phenyl_octanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP80t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_poctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP80t2ppNo2" sboTerm="SBO:0000176" id="R_FACOALP80t2ppNo2" name="fatty_acid__CoA_ligase__Phenyl_octanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP80t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_poctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP80t2ppNo3" sboTerm="SBO:0000176" id="R_FACOALP80t2ppNo3" name="fatty_acid__CoA_ligase__Phenyl_octanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOALP80t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_poctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOALP90t2pp" sboTerm="SBO:0000176" id="R_arm_FACOALP90t2pp" name="fatty_acid__CoA_ligase__Phenyl_nonanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_phenona_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOALP90t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP90t2ppNo1" sboTerm="SBO:0000176" id="R_FACOALP90t2ppNo1" name="fatty_acid__CoA_ligase__Phenyl_nonanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP90t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP90t2ppNo2" sboTerm="SBO:0000176" id="R_FACOALP90t2ppNo2" name="fatty_acid__CoA_ligase__Phenyl_nonanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALP90t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALP90t2ppNo3" sboTerm="SBO:0000176" id="R_FACOALP90t2ppNo3" name="fatty_acid__CoA_ligase__Phenyl_nonanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOALP90t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOALT60t2pp" sboTerm="SBO:0000176" id="R_arm_FACOALT60t2pp" name="fatty_acid__CoA_ligase__6_acetylthiohexanoate_transport_via_vectoral_Co_A_coupling_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6atha_p" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOALT60t2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALT60t2ppNo1" sboTerm="SBO:0000176" id="R_FACOALT60t2ppNo1" name="fatty_acid__CoA_ligase__6_acetylthiohexanoate_transport_via_vectoral_Co_A_coupling_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALT60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALT60t2ppNo2" sboTerm="SBO:0000176" id="R_FACOALT60t2ppNo2" name="fatty_acid__CoA_ligase__6_acetylthiohexanoate_transport_via_vectoral_Co_A_coupling_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOALT60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOALT60t2ppNo3" sboTerm="SBO:0000176" id="R_FACOALT60t2ppNo3" name="fatty_acid__CoA_ligase__6_acetylthiohexanoate_transport_via_vectoral_Co_A_coupling_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS6" stoichiometry="5.144e-06" constant="true"/> <speciesReference species="M_pmet_FACOALT60t2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2213"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FALDH2No1" sboTerm="SBO:0000176" id="R_FALDH2No1" name="formaldehyde_dehydrogenase (No1)" reversible="false" fast="false" 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stoichiometry="1" constant="true"/> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4960"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FCOAHANo1" sboTerm="SBO:0000176" id="R_FCOAHANo1" name="enoyl_coa_hydratasealdolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ferulcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HJ8" stoichiometry="7.4671e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanln_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3358"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FDH" sboTerm="SBO:0000176" id="R_arm_FDH" name="formate_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FDH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2183"/> <fbc:geneProductRef fbc:geneProduct="PP_2184"/> <fbc:geneProductRef fbc:geneProduct="PP_2185"/> <fbc:geneProductRef fbc:geneProduct="PP_2186"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0489"/> <fbc:geneProductRef fbc:geneProduct="PP_0490"/> <fbc:geneProductRef fbc:geneProduct="PP_0491"/> <fbc:geneProductRef fbc:geneProduct="PP_0492"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDHNo1" sboTerm="SBO:0000176" id="R_FDHNo1" name="formate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KV3" stoichiometry="1.7629e-07" constant="true"/> <speciesReference species="M_prot_Q88KV4" stoichiometry="1.7629e-07" constant="true"/> <speciesReference species="M_prot_Q88KV5" stoichiometry="1.7629e-07" constant="true"/> <speciesReference species="M_prot_Q88KV6" stoichiometry="1.7629e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2183"/> <fbc:geneProductRef fbc:geneProduct="PP_2184"/> <fbc:geneProductRef fbc:geneProduct="PP_2185"/> <fbc:geneProductRef fbc:geneProduct="PP_2186"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FDHNo2" sboTerm="SBO:0000176" id="R_FDHNo2" name="formate_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FVZ1" stoichiometry="2.7778e-05" constant="true"/> <speciesReference species="M_prot_Q88QK0" stoichiometry="2.7778e-05" constant="true"/> <speciesReference species="M_prot_Q88QK1" stoichiometry="2.7778e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0489"/> <fbc:geneProductRef fbc:geneProduct="PP_0490"/> <fbc:geneProductRef fbc:geneProduct="PP_0491"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITRNo1" sboTerm="SBO:0000176" id="R_FE3DCITRNo1" name="Ferric_dicitrate_reductase__frxr_42_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3dcit_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="4" constant="true"/> <speciesReference species="M_fdxo_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITR2No1" sboTerm="SBO:0000176" id="R_FE3DCITR2No1" name="Ferric_dicitrate_reductase__frxr_22_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_22_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_prot_Q88PK3" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fdxo_22_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FE3DCITR3" sboTerm="SBO:0000176" id="R_arm_FE3DCITR3" name="Ferric_dicitrate_reductase__fmn_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fe3dcit_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FE3DCITR3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITR3No1" sboTerm="SBO:0000176" id="R_FE3DCITR3No1" name="Ferric_dicitrate_reductase__fmn_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FE3DCITR3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="4" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITR3No2" sboTerm="SBO:0000176" id="R_FE3DCITR3No2" name="Ferric_dicitrate_reductase__fmn_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FE3DCITR3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="4" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FE3DCITR4No1" sboTerm="SBO:0000176" id="R_FE3DCITR4No1" name="Ferric_dicitrate_reductase__flxr_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_flxr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_prot_Q88E40" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_flxso_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> <fbc:geneProductRef fbc:geneProduct="PP_4628"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FEROpp" sboTerm="SBO:0000176" id="R_arm_FEROpp" name="ferroxidase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fe2_p" stoichiometry="4" constant="true"/> <speciesReference species="M_h_p" stoichiometry="4" constant="true"/> <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FEROpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5380"/> <fbc:geneProductRef fbc:geneProduct="PP_2205"/> <fbc:geneProductRef fbc:geneProduct="PP_1082"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEROppNo1" sboTerm="SBO:0000176" id="R_FEROppNo1" name="ferroxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FEROpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C03" stoichiometry="1.2541e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3_p" stoichiometry="4" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5380"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEROppNo2" sboTerm="SBO:0000176" id="R_FEROppNo2" name="ferroxidase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FEROpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KT4" stoichiometry="1.2541e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3_p" stoichiometry="4" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2205"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FEROppNo3" sboTerm="SBO:0000176" id="R_FEROppNo3" name="ferroxidase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FEROpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NX1" stoichiometry="1.2541e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fe3_p" stoichiometry="4" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1082"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FERULCOASNo1" sboTerm="SBO:0000176" id="R_FERULCOASNo1" name="feruloyl_coenzyme_A_synthetase__AMP_forming_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fer_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HK0" stoichiometry="5.144e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ferulcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3356"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FLDR2No1" sboTerm="SBO:0000176" id="R_FLDR2No1" name="flavodoxin_reductase__NADPH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_flxso_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_prot_Q88E40" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_flxr_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> <fbc:geneProductRef fbc:geneProduct="PP_4628"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FMNATNo1" sboTerm="SBO:0000176" id="R_FMNATNo1" name="FMN_adenylyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q93" stoichiometry="4.085e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0602"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FMNR2rNo1" sboTerm="SBO:0000176" id="R_FMNR2rNo1" name="FMN_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FMNRxNo1" sboTerm="SBO:0000176" id="R_FMNRxNo1" name="FMN_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FMNRx2" sboTerm="SBO:0000176" id="R_arm_FMNRx2" name="FMN_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FMNRx2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0236"/> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FMNRx2No1" sboTerm="SBO:0000176" id="R_FMNRx2No1" name="FMN_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FMNRx2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FMNRx2No2" sboTerm="SBO:0000176" id="R_FMNRx2No2" name="FMN_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FMNRx2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FOLD3No1" sboTerm="SBO:0000176" id="R_FOLD3No1" name="dihydropteroate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2ahhmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4abz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DV2" stoichiometry="0.0022347" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4717"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FORGLUIH2No1" sboTerm="SBO:0000176" id="R_FORGLUIH2No1" name="N_formimino_L_glutamate_inimohydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_forglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CZ3" stoichiometry="8.9606e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Nforglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5036"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO4rNo1" sboTerm="SBO:0000176" id="R_FRDO4rNo1" name="ferredoxin_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_prot_Q88PK3" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FRDO5r" sboTerm="SBO:0000176" id="R_arm_FRDO5r" name="ferredoxin_oxidoreductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FRDO5r" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1625"/> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1625"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO5rNo1" sboTerm="SBO:0000176" id="R_FRDO5rNo1" name="ferredoxin_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FRDO5r" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO5rNo2" sboTerm="SBO:0000176" id="R_FRDO5rNo2" name="ferredoxin_oxidoreductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FRDO5r" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO6rNo1" sboTerm="SBO:0000176" id="R_FRDO6rNo1" name="ferredoxin_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO7rNo1" sboTerm="SBO:0000176" id="R_FRDO7rNo1" name="ferredoxin_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_prot_Q88PK3" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRUptsppNo1" sboTerm="SBO:0000176" id="R_FRUptsppNo1" name="D_fructose_transport_via_PEPPyr_PTS__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fru_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PQ3" stoichiometry="1.4358e-08" constant="true"/> <speciesReference species="M_prot_Q88PQ5" stoichiometry="1.4358e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_f1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0795"/> <fbc:geneProductRef fbc:geneProduct="PP_0793"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FTHFCLNo1" sboTerm="SBO:0000176" id="R_FTHFCLNo1" name="5_formethyltetrahydrofolate_cyclo_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CH8" stoichiometry="0.00027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5203"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FTHFD" sboTerm="SBO:0000176" id="R_arm_FTHFD" name="formyltetrahydrofolate_deformylase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FTHFD" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0327"/> <fbc:geneProductRef fbc:geneProduct="PP_1367"/> <fbc:geneProductRef fbc:geneProduct="PP_1943"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FTHFDNo1" sboTerm="SBO:0000176" id="R_FTHFDNo1" name="formyltetrahydrofolate_deformylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FTHFD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R07" stoichiometry="0.00050413" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0327"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FTHFDNo2" sboTerm="SBO:0000176" id="R_FTHFDNo2" name="formyltetrahydrofolate_deformylase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FTHFD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N49" stoichiometry="0.00050413" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1367"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FTHFDNo3" sboTerm="SBO:0000176" id="R_FTHFDNo3" name="formyltetrahydrofolate_deformylase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FTHFD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LI9" stoichiometry="0.00050413" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1943"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FUM" sboTerm="SBO:0000176" id="R_arm_FUM" name="fumarase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FUM" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0944"/> <fbc:geneProductRef fbc:geneProduct="PP_1755"/> <fbc:geneProductRef fbc:geneProduct="PP_0897"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUMNo1" sboTerm="SBO:0000176" id="R_FUMNo1" name="fumarase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FUM" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PA6" stoichiometry="2.4155e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0944"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUMNo2" sboTerm="SBO:0000176" id="R_FUMNo2" name="fumarase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_FUM" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PF3" stoichiometry="2.4155e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0897"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUMACNo1" sboTerm="SBO:0000176" id="R_FUMACNo1" name="fumarylacetoacetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4fumacac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E48" stoichiometry="1.2889e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4620"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G1PTTNo1" sboTerm="SBO:0000176" id="R_G1PTTNo1" name="glucose_1_phosphate_thymidylyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dttp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ3" stoichiometry="9.01e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dtdpglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1783"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G2PPNo1" sboTerm="SBO:0000176" id="R_G2PPNo1" name="glycerol_2_phosphate_phosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyc2p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PL2" stoichiometry="1.0365e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0838"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G3PD5No1" sboTerm="SBO:0000176" id="R_G3PD5No1" name="glycerol_3_phosphate_dehydrogenase__ubiquinone_8_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NY0" stoichiometry="8.3417e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1073"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_G6PBDH" sboTerm="SBO:0000176" id="R_arm_G6PBDH" name="beta_D_Glucose_6_phosphateNADP_1_oxoreductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g6p_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_G6PBDH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1022"/> <fbc:geneProductRef fbc:geneProduct="PP_5351"/> <fbc:geneProductRef fbc:geneProduct="PP_4042"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PBDHNo1" sboTerm="SBO:0000176" id="R_G6PBDHNo1" name="beta_D_Glucose_6_phosphateNADP_1_oxoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_G6PBDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P31" stoichiometry="2.0129e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1022"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PBDHNo2" sboTerm="SBO:0000176" id="R_G6PBDHNo2" name="beta_D_Glucose_6_phosphateNADP_1_oxoreductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_G6PBDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C32" stoichiometry="2.0129e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5351"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PBDHNo3" sboTerm="SBO:0000176" id="R_G6PBDHNo3" name="beta_D_Glucose_6_phosphateNADP_1_oxoreductase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_G6PBDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FP7" stoichiometry="2.0129e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4042"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_G6PDH2r" sboTerm="SBO:0000176" id="R_arm_G6PDH2r" name="glucose_6_phosphate_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_G6PDH2r" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1022"/> <fbc:geneProductRef fbc:geneProduct="PP_5351"/> <fbc:geneProductRef fbc:geneProduct="PP_4042"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PDH2rNo1" sboTerm="SBO:0000176" id="R_G6PDH2rNo1" name="glucose_6_phosphate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88P31" stoichiometry="2.0129e-07" constant="true"/> <speciesReference species="M_pmet_G6PDH2r" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1022"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PDH2rNo2" sboTerm="SBO:0000176" id="R_G6PDH2rNo2" name="glucose_6_phosphate_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C32" stoichiometry="2.0129e-07" constant="true"/> <speciesReference species="M_pmet_G6PDH2r" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5351"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_G6PDH2rNo3" sboTerm="SBO:0000176" id="R_G6PDH2rNo3" name="glucose_6_phosphate_dehydrogenase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FP7" stoichiometry="2.0129e-07" constant="true"/> <speciesReference species="M_pmet_G6PDH2r" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4042"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAD2ktppNo1" sboTerm="SBO:0000176" id="R_GAD2ktppNo1" name="gluconate_2_dehydrogenase__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HH4" stoichiometry="2.2487e-07" constant="true"/> <speciesReference species="M_prot_Q88HH5" stoichiometry="2.2487e-07" constant="true"/> <speciesReference species="M_prot_Q88HH6" stoichiometry="2.2487e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2dhglcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3382"/> <fbc:geneProductRef fbc:geneProduct="PP_3383"/> <fbc:geneProductRef fbc:geneProduct="PP_3384"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALCTDNo1" sboTerm="SBO:0000176" id="R_GALCTDNo1" name="galactarate_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_galct__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GW6" stoichiometry="1.2626e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5dh4dglc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3601"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALUiNo1" sboTerm="SBO:0000176" id="R_GALUiNo1" name="UTP_glucose_1_phosphate_uridylyltransferase__irreversible_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GA4" stoichiometry="6.9444e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3821"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GAPD" sboTerm="SBO:0000176" id="R_arm_GAPD" name="glyceraldehyde_3_phosphate_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GAPD" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1009"/> <fbc:geneProductRef fbc:geneProduct="PP_2149"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPDNo1" sboTerm="SBO:0000176" id="R_GAPDNo1" name="glyceraldehyde_3_phosphate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GAPD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P44" stoichiometry="8.4175e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1009"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPDNo2" sboTerm="SBO:0000176" id="R_GAPDNo2" name="glyceraldehyde_3_phosphate_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GAPD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KZ0" stoichiometry="8.4175e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2149"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GARFTNo1" sboTerm="SBO:0000176" id="R_GARFTNo1" name="phosphoribosylglycinamide_formyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB0" stoichiometry="6.9444e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GBDMNo1" sboTerm="SBO:0000176" id="R_GBDMNo1" name="Glycine_betaine_demethylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R23" stoichiometry="6.9444e-06" constant="true"/> <speciesReference species="M_prot_Q88R24" stoichiometry="6.9444e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0310"/> <fbc:geneProductRef fbc:geneProduct="PP_0311"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GCALDD" sboTerm="SBO:0000176" id="R_arm_GCALDD" name="Glycolaldehyde_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gcald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GCALDD" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2680"/> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GCALDDNo1" sboTerm="SBO:0000176" id="R_GCALDDNo1" name="Glycolaldehyde_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JG9" stoichiometry="0.00023148" constant="true"/> <speciesReference species="M_pmet_GCALDD" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2680"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GCALDDNo2" sboTerm="SBO:0000176" id="R_GCALDDNo2" name="Glycolaldehyde_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE9" stoichiometry="0.00023148" constant="true"/> <speciesReference species="M_pmet_GCALDD" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GDBTALDHNo1" sboTerm="SBO:0000176" id="R_GDBTALDHNo1" name="4_Guanidinobutanoate (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gdbtal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4gudbutn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GDPDPK" sboTerm="SBO:0000176" id="R_arm_GDPDPK" name="GDP_diphosphokinase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GDPDPK" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1656"/> <fbc:geneProductRef fbc:geneProduct="PP_5302"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GDPDPKNo1" sboTerm="SBO:0000176" id="R_GDPDPKNo1" name="GDP_diphosphokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GDPDPK" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB8" stoichiometry="3.8052e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppgpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1656"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GDPDPKNo2" sboTerm="SBO:0000176" id="R_GDPDPKNo2" name="GDP_diphosphokinase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GDPDPK" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C81" stoichiometry="3.8052e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppgpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5302"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GDPTPDPNo1" sboTerm="SBO:0000176" id="R_GDPTPDPNo1" name="guanosine_3__diphosphate_5__triphosphate_3__diphosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gdptp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C81" stoichiometry="2.1872e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5302"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GG15DAPAH" sboTerm="SBO:0000176" id="R_arm_GG15DAPAH" name="gamma_glutamyl_delta_amino_valeric_acid_hydrolase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ggaptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GG15DAPAH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3598"/> <fbc:geneProductRef fbc:geneProduct="PP_5298"/> <fbc:geneProductRef fbc:geneProduct="PP_2179"/> <fbc:geneProductRef fbc:geneProduct="PP_1842"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPAHNo1" sboTerm="SBO:0000176" id="R_GG15DAPAHNo1" name="gamma_glutamyl_delta_amino_valeric_acid_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPAH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GW9" stoichiometry="1.8519e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3598"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPAHNo2" sboTerm="SBO:0000176" id="R_GG15DAPAHNo2" name="gamma_glutamyl_delta_amino_valeric_acid_hydrolase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPAH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C85" stoichiometry="9.1075e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5298"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPAHNo3" sboTerm="SBO:0000176" id="R_GG15DAPAHNo3" name="gamma_glutamyl_delta_amino_valeric_acid_hydrolase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPAH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KW0" stoichiometry="9.1075e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2179"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPAHNo4" sboTerm="SBO:0000176" id="R_GG15DAPAHNo4" name="gamma_glutamyl_delta_amino_valeric_acid_hydrolase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPAH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LT5" stoichiometry="9.1075e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1842"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPDxrNo1" sboTerm="SBO:0000176" id="R_GG15DAPDxrNo1" name="gamma_glutamyl_delta_aminovalerate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ggbdapal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggaptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GG15DAPS" sboTerm="SBO:0000176" id="R_arm_GG15DAPS" name="gamma_glutamyl_cadaverine_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3148"/> <fbc:geneProductRef fbc:geneProduct="PP_5184"/> <fbc:geneProductRef fbc:geneProduct="PP_4399"/> <fbc:geneProductRef fbc:geneProduct="PP_2178"/> <fbc:geneProductRef fbc:geneProduct="PP_5299"/> <fbc:geneProductRef fbc:geneProduct="PP_5183"/> <fbc:geneProductRef fbc:geneProduct="PP_4547"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPSNo1" sboTerm="SBO:0000176" id="R_GG15DAPSNo1" name="gamma_glutamyl_cadaverine_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I53" stoichiometry="4.6764e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3148"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPSNo2" sboTerm="SBO:0000176" id="R_GG15DAPSNo2" name="gamma_glutamyl_cadaverine_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CJ6" stoichiometry="4.6764e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPSNo3" sboTerm="SBO:0000176" id="R_GG15DAPSNo3" name="gamma_glutamyl_cadaverine_synthase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EQ4" stoichiometry="4.6764e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4399"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPSNo4" sboTerm="SBO:0000176" id="R_GG15DAPSNo4" name="gamma_glutamyl_cadaverine_synthase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KW1" stoichiometry="4.6764e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2178"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPSNo5" sboTerm="SBO:0000176" id="R_GG15DAPSNo5" name="gamma_glutamyl_cadaverine_synthase (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C84" stoichiometry="4.6764e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5299"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPSNo6" sboTerm="SBO:0000176" id="R_GG15DAPSNo6" name="gamma_glutamyl_cadaverine_synthase (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CJ7" stoichiometry="4.6764e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5183"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPSNo7" sboTerm="SBO:0000176" id="R_GG15DAPSNo7" name="gamma_glutamyl_cadaverine_synthase (No7)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GG15DAPS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EB9" stoichiometry="4.6764e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4547"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GGDAPAH" sboTerm="SBO:0000176" id="R_arm_GGDAPAH" name="gamma_glutamyl_beta_aminopropionic_acid_hydrolase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ggala__B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GGDAPAH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3598"/> <fbc:geneProductRef fbc:geneProduct="PP_2179"/> <fbc:geneProductRef fbc:geneProduct="PP_1842"/> <fbc:geneProductRef fbc:geneProduct="PP_5298"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPAHNo1" sboTerm="SBO:0000176" id="R_GGDAPAHNo1" name="gamma_glutamyl_beta_aminopropionic_acid_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GW9" stoichiometry="1.8519e-06" constant="true"/> <speciesReference species="M_pmet_GGDAPAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3598"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPAHNo2" sboTerm="SBO:0000176" id="R_GGDAPAHNo2" name="gamma_glutamyl_beta_aminopropionic_acid_hydrolase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KW0" stoichiometry="9.1075e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2179"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPAHNo3" sboTerm="SBO:0000176" id="R_GGDAPAHNo3" name="gamma_glutamyl_beta_aminopropionic_acid_hydrolase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT5" stoichiometry="9.1075e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1842"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPAHNo4" sboTerm="SBO:0000176" id="R_GGDAPAHNo4" name="gamma_glutamyl_beta_aminopropionic_acid_hydrolase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C85" stoichiometry="9.1075e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5298"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPDxrNo1" sboTerm="SBO:0000176" id="R_GGDAPDxrNo1" name="gamma_glutamyl_beta_aminopropionate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ggbamppal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggala__B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GGDAPS" sboTerm="SBO:0000176" id="R_arm_GGDAPS" name="gamma_glutamyl_diaminopropane_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4547"/> <fbc:geneProductRef fbc:geneProduct="PP_3148"/> <fbc:geneProductRef fbc:geneProduct="PP_5184"/> <fbc:geneProductRef fbc:geneProduct="PP_5183"/> <fbc:geneProductRef fbc:geneProduct="PP_5299"/> <fbc:geneProductRef fbc:geneProduct="PP_2178"/> <fbc:geneProductRef fbc:geneProduct="PP_4399"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPSNo1" sboTerm="SBO:0000176" id="R_GGDAPSNo1" name="gamma_glutamyl_diaminopropane_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB9" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4547"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPSNo2" sboTerm="SBO:0000176" id="R_GGDAPSNo2" name="gamma_glutamyl_diaminopropane_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88I53" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3148"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPSNo3" sboTerm="SBO:0000176" id="R_GGDAPSNo3" name="gamma_glutamyl_diaminopropane_synthase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CJ6" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPSNo4" sboTerm="SBO:0000176" id="R_GGDAPSNo4" name="gamma_glutamyl_diaminopropane_synthase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CJ7" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5183"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPSNo5" sboTerm="SBO:0000176" id="R_GGDAPSNo5" name="gamma_glutamyl_diaminopropane_synthase (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C84" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5299"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPSNo6" sboTerm="SBO:0000176" id="R_GGDAPSNo6" name="gamma_glutamyl_diaminopropane_synthase (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KW1" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2178"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPSNo7" sboTerm="SBO:0000176" id="R_GGDAPSNo7" name="gamma_glutamyl_diaminopropane_synthase (No7)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EQ4" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGDAPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gg13dampp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4399"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGGABADxrNo1" sboTerm="SBO:0000176" id="R_GGGABADxrNo1" name="gamma_glutamyl_gamma_aminobutyric_acid_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ggbutal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gg4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GGGABAH" sboTerm="SBO:0000176" id="R_arm_GGGABAH" name="gamma_glutamyl_gamma_aminobutyric_acid_hydrolase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gg4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GGGABAH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3598"/> <fbc:geneProductRef fbc:geneProduct="PP_5298"/> <fbc:geneProductRef fbc:geneProduct="PP_2179"/> <fbc:geneProductRef fbc:geneProduct="PP_1842"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGGABAHNo1" sboTerm="SBO:0000176" id="R_GGGABAHNo1" name="gamma_glutamyl_gamma_aminobutyric_acid_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GW9" stoichiometry="1.8519e-06" constant="true"/> <speciesReference species="M_pmet_GGGABAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3598"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGGABAHNo2" sboTerm="SBO:0000176" id="R_GGGABAHNo2" name="gamma_glutamyl_gamma_aminobutyric_acid_hydrolase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C85" stoichiometry="9.1075e-05" constant="true"/> <speciesReference species="M_pmet_GGGABAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5298"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGGABAHNo3" sboTerm="SBO:0000176" id="R_GGGABAHNo3" name="gamma_glutamyl_gamma_aminobutyric_acid_hydrolase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KW0" stoichiometry="9.1075e-05" constant="true"/> <speciesReference species="M_pmet_GGGABAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2179"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGGABAHNo4" sboTerm="SBO:0000176" id="R_GGGABAHNo4" name="gamma_glutamyl_gamma_aminobutyric_acid_hydrolase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LT5" stoichiometry="9.1075e-05" constant="true"/> <speciesReference species="M_pmet_GGGABAH" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1842"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GGPTRCS" sboTerm="SBO:0000176" id="R_arm_GGPTRCS" name="gamma_glutamyl_putrescine_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3148"/> <fbc:geneProductRef fbc:geneProduct="PP_4399"/> <fbc:geneProductRef fbc:geneProduct="PP_4547"/> <fbc:geneProductRef fbc:geneProduct="PP_5183"/> <fbc:geneProductRef fbc:geneProduct="PP_5184"/> <fbc:geneProductRef fbc:geneProduct="PP_5299"/> <fbc:geneProductRef fbc:geneProduct="PP_2178"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCSNo1" sboTerm="SBO:0000176" id="R_GGPTRCSNo1" name="gamma_glutamyl_putrescine_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88I53" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3148"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCSNo2" sboTerm="SBO:0000176" id="R_GGPTRCSNo2" name="gamma_glutamyl_putrescine_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EQ4" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4399"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCSNo3" sboTerm="SBO:0000176" id="R_GGPTRCSNo3" name="gamma_glutamyl_putrescine_synthase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EB9" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4547"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCSNo4" sboTerm="SBO:0000176" id="R_GGPTRCSNo4" name="gamma_glutamyl_putrescine_synthase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CJ7" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5183"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCSNo5" sboTerm="SBO:0000176" id="R_GGPTRCSNo5" name="gamma_glutamyl_putrescine_synthase (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CJ6" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5184"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCSNo6" sboTerm="SBO:0000176" id="R_GGPTRCSNo6" name="gamma_glutamyl_putrescine_synthase (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C84" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5299"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGPTRCSNo7" sboTerm="SBO:0000176" id="R_GGPTRCSNo7" name="gamma_glutamyl_putrescine_synthase (No7)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KW1" stoichiometry="4.6764e-05" constant="true"/> <speciesReference species="M_pmet_GGPTRCS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ggptrc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2178"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCDppNo1" sboTerm="SBO:0000176" id="R_GLCDppNo1" name="Glucose_dehydrogenase__ubiquinone_8_as_acceptor___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glc__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MX4" stoichiometry="7.1963e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1444"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCOASYNTNo1" sboTerm="SBO:0000176" id="R_GLCOASYNTNo1" name="Glutaryl_CoAdihydrolipoamide_S_succinyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_S_gtrdhdlp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FA9" stoichiometry="0.00020281" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glutcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCP3No1" sboTerm="SBO:0000176" id="R_GLCP3No1" name="glycogen_phosphorylase__4_units_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyg4n_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="4" constant="true"/> <speciesReference species="M_prot_Q88CY8" stoichiometry="2.2002e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g1p_c" stoichiometry="4" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5041"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCP4No1" sboTerm="SBO:0000176" id="R_GLCP4No1" name="glycogen_phosphorylase__4_units_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_bglyg4n_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="4" constant="true"/> <speciesReference species="M_prot_Q88CY8" stoichiometry="2.2002e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g1p_c" stoichiometry="4" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5041"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCRDNo1" sboTerm="SBO:0000176" id="R_GLCRDNo1" name="glucarate_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glcr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DR6" stoichiometry="1.3228e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5dh4dglc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4757"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLCabcppNo1" sboTerm="SBO:0000176" id="R_GLCabcppNo1" name="D_glucose_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glc__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P35" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88P36" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88P37" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88P38" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1015"/> <fbc:geneProductRef fbc:geneProduct="PP_1016"/> <fbc:geneProductRef fbc:geneProduct="PP_1017"/> <fbc:geneProductRef fbc:geneProduct="PP_1018"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLDBRAN3No1" sboTerm="SBO:0000176" id="R_GLDBRAN3No1" name="glycogen_debranching_enzyme__bglyg4n___glyg4n_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_bglyg4n_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FN4" stoichiometry="0.0058113" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyg4n_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4055"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLNSNo1" sboTerm="SBO:0000176" id="R_GLNSNo1" name="glutamine_synthetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CY3" stoichiometry="9.2593e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5046"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLNtexNo1" sboTerm="SBO:0000176" id="R_GLNtexNo1" name="L_glutamine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gln__L_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gln__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUDxNo1" sboTerm="SBO:0000176" id="R_GLUDxNo1" name="glutamate_dehydrogenase__NAD_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L55" stoichiometry="8.0749e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2080"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUPRTNo1" sboTerm="SBO:0000176" id="R_GLUPRTNo1" name="glutamine_phosphoribosyldiphosphate_amidotransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LD5" stoichiometry="4.3259e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pram_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2000"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUSyNo1" sboTerm="SBO:0000176" id="R_GLUSyNo1" name="glutamate_synthase__NADPH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CV4" stoichiometry="6.6295e-06" constant="true"/> <speciesReference species="M_prot_Q88CV5" stoichiometry="6.6295e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5075"/> <fbc:geneProductRef fbc:geneProduct="PP_5076"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUTCOADHcNo1" sboTerm="SBO:0000176" id="R_GLUTCOADHcNo1" name="glutaryl_CoA_dehydrogenase__citosol_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glutcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RH2" stoichiometry="1.7361e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0158"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLUabcpp" sboTerm="SBO:0000176" id="R_arm_GLUabcpp" name="L_glutamate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLUabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1071"/> <fbc:geneProductRef fbc:geneProduct="PP_1070"/> <fbc:geneProductRef fbc:geneProduct="PP_1068"/> <fbc:geneProductRef fbc:geneProduct="PP_1069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUabcppNo1" sboTerm="SBO:0000176" id="R_GLUabcppNo1" name="L_glutamate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88NB2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB4" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NB5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1297"/> <fbc:geneProductRef fbc:geneProduct="PP_1299"/> <fbc:geneProductRef fbc:geneProduct="PP_1300"/> <fbc:geneProductRef fbc:geneProduct="PP_1298"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUabcppNo2" sboTerm="SBO:0000176" id="R_GLUabcppNo2" name="L_glutamate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88NY2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NY3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NY4" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88NY5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1071"/> <fbc:geneProductRef fbc:geneProduct="PP_1070"/> <fbc:geneProductRef fbc:geneProduct="PP_1068"/> <fbc:geneProductRef fbc:geneProduct="PP_1069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUtexNo1" sboTerm="SBO:0000176" id="R_GLUtexNo1" name="L_glutamate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLXCLNo1" sboTerm="SBO:0000176" id="R_GLXCLNo1" name="glyoxalate_carboligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glx_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F03" stoichiometry="2.9394e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2h3oppan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4297"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYALDDr" sboTerm="SBO:0000176" id="R_arm_GLYALDDr" name="D_Glyceraldehyde_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYALDDr" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYALDDrNo1" sboTerm="SBO:0000176" id="R_GLYALDDrNo1" name="D_Glyceraldehyde_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE9" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_GLYALDDr" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYALDDrNo2" sboTerm="SBO:0000176" id="R_GLYALDDrNo2" name="D_Glyceraldehyde_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JF5" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_GLYALDDr" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYBACT1r" sboTerm="SBO:0000176" id="R_arm_GLYBACT1r" name="Glycine_betaine_CoA_C_acetyltransferase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhcrncoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYBACT1r" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> <fbc:geneProductRef fbc:geneProduct="PP_0303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBACT1rNo1" sboTerm="SBO:0000176" id="R_GLYBACT1rNo1" name="Glycine_betaine_CoA_C_acetyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L84" stoichiometry="1.8769e-05" constant="true"/> <speciesReference species="M_pmet_GLYBACT1r" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glybcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBACT1rNo2" sboTerm="SBO:0000176" id="R_GLYBACT1rNo2" name="Glycine_betaine_CoA_C_acetyltransferase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88E32" stoichiometry="5.5556e-11" constant="true"/> <speciesReference species="M_pmet_GLYBACT1r" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glybcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBACT1rNo3" sboTerm="SBO:0000176" id="R_GLYBACT1rNo3" name="Glycine_betaine_CoA_C_acetyltransferase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GLYBACT1r" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R31" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glybcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBCOATNo1" sboTerm="SBO:0000176" id="R_GLYBCOATNo1" name="Glycine_betaine_CoA_thioesterase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glybcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R33" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0301"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYBabcpp" sboTerm="SBO:0000176" id="R_arm_GLYBabcpp" name="Glycine_betaine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyb_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYBabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> <fbc:geneProductRef fbc:geneProduct="PP_0296"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1741"/> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBabcppNo1" sboTerm="SBO:0000176" id="R_GLYBabcppNo1" name="Glycine_betaine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PI1" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88PI2" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_pmet_GLYBabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0868"/> <fbc:geneProductRef fbc:geneProduct="PP_0869"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBabcppNo2" sboTerm="SBO:0000176" id="R_GLYBabcppNo2" name="Glycine_betaine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PH9" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88PI0" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_pmet_GLYBabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0871"/> <fbc:geneProductRef fbc:geneProduct="PP_0870"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBabcppNo3" sboTerm="SBO:0000176" id="R_GLYBabcppNo3" name="Glycine_betaine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R38" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R39" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R40" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_pmet_GLYBabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> <fbc:geneProductRef fbc:geneProduct="PP_0296"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBabcppNo4" sboTerm="SBO:0000176" id="R_GLYBabcppNo4" name="Glycine_betaine_transport_via_ABC_system__periplasm_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R39" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_prot_Q88R40" stoichiometry="0.0011111" constant="true"/> <speciesReference species="M_pmet_GLYBabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M34" stoichiometry="0.0011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1741"/> <fbc:geneProductRef fbc:geneProduct="PP_0294"/> <fbc:geneProductRef fbc:geneProduct="PP_0295"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCKNo1" sboTerm="SBO:0000176" id="R_GLYCKNo1" name="glycerate_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I24" stoichiometry="1.7708e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3pg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3178"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYCL" sboTerm="SBO:0000176" id="R_arm_GLYCL" name="Glycine_Cleavage_System (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYCL" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5193"/> <fbc:geneProductRef fbc:geneProduct="PP_5192"/> <fbc:geneProductRef fbc:geneProduct="PP_5194"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0989"/> <fbc:geneProductRef fbc:geneProduct="PP_0988"/> <fbc:geneProductRef fbc:geneProduct="PP_0986"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCLNo1" sboTerm="SBO:0000176" id="R_GLYCLNo1" name="Glycine_Cleavage_System (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FB1" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_pmet_GLYCL" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCLNo2" sboTerm="SBO:0000176" id="R_GLYCLNo2" name="Glycine_Cleavage_System (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FB1" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_pmet_GLYCL" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P67" stoichiometry="1.9608e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0986"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCLTDyNo1" sboTerm="SBO:0000176" id="R_GLYCLTDyNo1" name="Glycolate_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F00" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4300"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYCOLDHpp" sboTerm="SBO:0000176" id="R_arm_GLYCOLDHpp" name="glycol_dehydrogenase__forward_rxn__ethanol___acetaldehyde_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glycol_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYCOLDHpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2674"/> <fbc:geneProductRef fbc:geneProduct="PP_2679"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCOLDHppNo1" sboTerm="SBO:0000176" id="R_GLYCOLDHppNo1" name="glycol_dehydrogenase__forward_rxn__ethanol___acetaldehyde_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JH5" stoichiometry="3.0637e-06" constant="true"/> <speciesReference species="M_pmet_GLYCOLDHpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gcald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2674"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCOLDHppNo2" sboTerm="SBO:0000176" id="R_GLYCOLDHppNo2" name="glycol_dehydrogenase__forward_rxn__ethanol___acetaldehyde_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GLYCOLDHpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JH0" stoichiometry="3.0637e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gcald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2679"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYCTO1No1" sboTerm="SBO:0000176" id="R_GLYCTO1No1" name="Glycolate_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GH6" stoichiometry="0.00014393" constant="true"/> <speciesReference species="M_prot_Q88GH7" stoichiometry="0.00014393" constant="true"/> <speciesReference species="M_prot_Q88GH8" stoichiometry="0.00014393" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3745"/> <fbc:geneProductRef fbc:geneProduct="PP_3746"/> <fbc:geneProductRef fbc:geneProduct="PP_3747"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYGLNabcpp" sboTerm="SBO:0000176" id="R_arm_GLYGLNabcpp" name="L_Glycinylglutamine__Gly_Gln__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygln_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYGLNabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLNabcppNo1" sboTerm="SBO:0000176" id="R_GLYGLNabcppNo1" name="L_Glycinylglutamine__Gly_Gln__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygln_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLNabcppNo2" sboTerm="SBO:0000176" id="R_GLYGLNabcppNo2" name="L_Glycinylglutamine__Gly_Gln__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygln_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLNabcppNo3" sboTerm="SBO:0000176" id="R_GLYGLNabcppNo3" name="L_Glycinylglutamine__Gly_Gln__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygln_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLNtexNo1" sboTerm="SBO:0000176" id="R_GLYGLNtexNo1" name="L_Glycinylglutamine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glygln_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glygln_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYGLUabcpp" sboTerm="SBO:0000176" id="R_arm_GLYGLUabcpp" name="L_Glycinylglutamate__Gly_Glu__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyglu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYGLUabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLUabcppNo1" sboTerm="SBO:0000176" id="R_GLYGLUabcppNo1" name="L_Glycinylglutamate__Gly_Glu__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLUabcppNo2" sboTerm="SBO:0000176" id="R_GLYGLUabcppNo2" name="L_Glycinylglutamate__Gly_Glu__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLUabcppNo3" sboTerm="SBO:0000176" id="R_GLYGLUabcppNo3" name="L_Glycinylglutamate__Gly_Glu__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLUtexNo1" sboTerm="SBO:0000176" id="R_GLYGLUtexNo1" name="L_Histidinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyglu_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyglu_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYGLYabcpp" sboTerm="SBO:0000176" id="R_arm_GLYGLYabcpp" name="L_Glycinilglycine__Gly_Gly__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYGLYabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLYabcppNo1" sboTerm="SBO:0000176" id="R_GLYGLYabcppNo1" name="L_Glycinilglycine__Gly_Gly__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLYabcppNo2" sboTerm="SBO:0000176" id="R_GLYGLYabcppNo2" name="L_Glycinilglycine__Gly_Gly__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLYabcppNo3" sboTerm="SBO:0000176" id="R_GLYGLYabcppNo3" name="L_Glycinilglycine__Gly_Gly__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glygly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLYtexNo1" sboTerm="SBO:0000176" id="R_GLYGLYtexNo1" name="L_Glycinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glygly_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glygly_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYMETabcpp" sboTerm="SBO:0000176" id="R_arm_GLYMETabcpp" name="L_Glycinylmethionine__Gly_Met__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glymet_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYMETabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYMETabcppNo1" sboTerm="SBO:0000176" id="R_GLYMETabcppNo1" name="L_Glycinylmethionine__Gly_Met__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYMETabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glymet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYMETabcppNo2" sboTerm="SBO:0000176" id="R_GLYMETabcppNo2" name="L_Glycinylmethionine__Gly_Met__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYMETabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glymet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYMETabcppNo3" sboTerm="SBO:0000176" id="R_GLYMETabcppNo3" name="L_Glycinylmethionine__Gly_Met__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYMETabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glymet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYMETtexNo1" sboTerm="SBO:0000176" id="R_GLYMETtexNo1" name="L_Glycinylmethionine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glymet_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glymet_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYPHEabcpp" sboTerm="SBO:0000176" id="R_arm_GLYPHEabcpp" name="L_Glycinilphenylalanin__Gly_Phe__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyphe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYPHEabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYPHEabcppNo1" sboTerm="SBO:0000176" id="R_GLYPHEabcppNo1" name="L_Glycinilphenylalanin__Gly_Phe__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYPHEabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyphe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYPHEabcppNo2" sboTerm="SBO:0000176" id="R_GLYPHEabcppNo2" name="L_Glycinilphenylalanin__Gly_Phe__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYPHEabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyphe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYPHEabcppNo3" sboTerm="SBO:0000176" id="R_GLYPHEabcppNo3" name="L_Glycinilphenylalanin__Gly_Phe__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYPHEabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyphe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYPHEtexNo1" sboTerm="SBO:0000176" id="R_GLYPHEtexNo1" name="L_GlyPhe_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyphe_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyphe_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYSERabcpp" sboTerm="SBO:0000176" id="R_arm_GLYSERabcpp" name="L_Glycinylserine__Gly_Ser__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyser_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYSERabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYSERabcppNo1" sboTerm="SBO:0000176" id="R_GLYSERabcppNo1" name="L_Glycinylserine__Gly_Ser__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYSERabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYSERabcppNo2" sboTerm="SBO:0000176" id="R_GLYSERabcppNo2" name="L_Glycinylserine__Gly_Ser__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYSERabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYSERabcppNo3" sboTerm="SBO:0000176" id="R_GLYSERabcppNo3" name="L_Glycinylserine__Gly_Ser__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_GLYSERabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYSERtexNo1" sboTerm="SBO:0000176" id="R_GLYSERtexNo1" name="L_Glycinylserine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyser_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyser_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYtexNo1" sboTerm="SBO:0000176" id="R_GLYtexNo1" name="Glycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gly_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GMANDNo1" sboTerm="SBO:0000176" id="R_GMANDNo1" name="GDP_D_mannose_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gdpmann_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LX8" stoichiometry="3.1494e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdpddman_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1799"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GNDNo1" sboTerm="SBO:0000176" id="R_GNDNo1" name="phosphogluconate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FP6" stoichiometry="1.1922e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4043"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GNKNo1" sboTerm="SBO:0000176" id="R_GNKNo1" name="gluconokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HE4" stoichiometry="2.924e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3416"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GNNUCNo1" sboTerm="SBO:0000176" id="R_GNNUCNo1" name="gnnuc (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K32" stoichiometry="2.5602e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gua_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2460"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GPDDA2No1" sboTerm="SBO:0000176" id="R_GPDDA2No1" name="Glycerophosphodiester_phosphodiesterase__Glycerophosphoethanolamine_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g3pe_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KY7" stoichiometry="8.4175e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2152"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GPDDA4No1" sboTerm="SBO:0000176" id="R_GPDDA4No1" name="Glycerophosphodiester_phosphodiesterase__Glycerophosphoglycerol_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g3pg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KY7" stoichiometry="8.4175e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2152"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GRTTNo1" sboTerm="SBO:0000176" id="R_GRTTNo1" name="geranyltranstransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_grdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ipdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QG6" stoichiometry="0.00025253" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_frdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0528"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTHOrNo1" sboTerm="SBO:0000176" id="R_GTHOrNo1" name="glutathione_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GA5" stoichiometry="7.4074e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3819"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GTHRDHpp" sboTerm="SBO:0000176" id="R_arm_GTHRDHpp" name="glutathione_hydralase__periplasmic_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gthrd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GTHRDHpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3535"/> <fbc:geneProductRef fbc:geneProduct="PP_4659"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTHRDHppNo1" sboTerm="SBO:0000176" id="R_GTHRDHppNo1" name="glutathione_hydralase__periplasmic_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GTHRDHpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H30" stoichiometry="2.5368e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cgly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3535"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTHRDHppNo2" sboTerm="SBO:0000176" id="R_GTHRDHppNo2" name="glutathione_hydralase__periplasmic_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GTHRDHpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E09" stoichiometry="2.5368e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cgly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4659"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GTPCII2" sboTerm="SBO:0000176" id="R_arm_GTPCII2" name="GTP_cyclohydrolase_II__25drapp_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GTPCII2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0522"/> <fbc:geneProductRef fbc:geneProduct="PP_0516"/> <fbc:geneProductRef fbc:geneProduct="PP_3813"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTPCII2No1" sboTerm="SBO:0000176" id="R_GTPCII2No1" name="GTP_cyclohydrolase_II__25drapp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QH7" stoichiometry="0.002333" constant="true"/> <speciesReference species="M_pmet_GTPCII2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25drapp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0516"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTPCII2No2" sboTerm="SBO:0000176" id="R_GTPCII2No2" name="GTP_cyclohydrolase_II__25drapp_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GB1" stoichiometry="0.002333" constant="true"/> <speciesReference species="M_pmet_GTPCII2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25drapp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3813"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTPDPDPNo1" sboTerm="SBO:0000176" id="R_GTPDPDPNo1" name="guanosine_5__triphosphate_3__diphosphate_diphosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gdptp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CG5" stoichiometry="6.065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppgpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTPDPKNo1" sboTerm="SBO:0000176" id="R_GTPDPKNo1" name="GTP_diphosphokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB8" stoichiometry="2.1872e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdptp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1656"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTR1_ktNo1" sboTerm="SBO:0000176" id="R_GTR1_ktNo1" name="galactosyltransferase__LPS_core_synthesis___galactosyl__1_3Hep1__heptosyl__1_3__heptosyl__1_5__kdo2_lipidA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hhlipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ1" stoichiometry="5.5071e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galhhlipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0343"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GUACYC" sboTerm="SBO:0000176" id="R_arm_GUACYC" name="guanylate_cyclase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GUACYC" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4405"/> <fbc:geneProductRef fbc:geneProduct="PP_0165"/> <fbc:geneProductRef fbc:geneProduct="PP_3581"/> <fbc:geneProductRef fbc:geneProduct="PP_1494"/> <fbc:geneProductRef fbc:geneProduct="PP_0129"/> <fbc:geneProductRef fbc:geneProduct="PP_4670"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUACYCNo1" sboTerm="SBO:0000176" id="R_GUACYCNo1" name="guanylate_cyclase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GUACYC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EP8" stoichiometry="4.7041e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35cgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4405"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUACYCNo2" sboTerm="SBO:0000176" id="R_GUACYCNo2" name="guanylate_cyclase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GUACYC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RG5" stoichiometry="4.7041e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35cgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0165"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUACYCNo3" sboTerm="SBO:0000176" id="R_GUACYCNo3" name="guanylate_cyclase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GUACYC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GY4" stoichiometry="4.7041e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35cgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3581"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUACYCNo4" sboTerm="SBO:0000176" id="R_GUACYCNo4" name="guanylate_cyclase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GUACYC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MS4" stoichiometry="4.7041e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35cgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1494"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUACYCNo5" sboTerm="SBO:0000176" id="R_GUACYCNo5" name="guanylate_cyclase (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GUACYC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RK0" stoichiometry="4.7041e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35cgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0129"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUACYCNo6" sboTerm="SBO:0000176" id="R_GUACYCNo6" name="guanylate_cyclase (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_GUACYC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DZ8" stoichiometry="4.7041e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_35cgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4670"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GUADNo1" sboTerm="SBO:0000176" id="R_GUADNo1" name="guanine_deaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gua_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F18" stoichiometry="4.2801e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4281"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2CO3DNo1" sboTerm="SBO:0000176" id="R_H2CO3DNo1" name="carboxylic_acid_dissociation (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RM9" stoichiometry="3.3752e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2co3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD10iNo1" sboTerm="SBO:0000176" id="R_HACD10iNo1" name="3_hydroxyacyl_CoA_dehydrogenase___3_oxoheptaryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD11iNo1" sboTerm="SBO:0000176" id="R_HACD11iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxononaryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ononacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD19iNo1" sboTerm="SBO:0000176" id="R_HACD19iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo_6acetylthiohexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3h6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3o6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HACD1i" sboTerm="SBO:0000176" id="R_arm_HACD1i" name="3_hydroxyacyl_CoA_dehydrogenase__acetoacetyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HACD1i" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> <fbc:geneProductRef fbc:geneProduct="PP_3755"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD1iNo1" sboTerm="SBO:0000176" id="R_HACD1iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__acetoacetyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> <speciesReference species="M_pmet_HACD1i" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD1iNo2" sboTerm="SBO:0000176" id="R_HACD1iNo2" name="3_hydroxyacyl_CoA_dehydrogenase__acetoacetyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_HACD1i" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GG9" stoichiometry="1.7024e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3755"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD20iNo1" sboTerm="SBO:0000176" id="R_HACD20iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__11Z__octadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hvacccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ovacccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD21iNo1" sboTerm="SBO:0000176" id="R_HACD21iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__9Z__hexadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD22iNo1" sboTerm="SBO:0000176" id="R_HACD22iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__7Z__tetradecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3htdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3otdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD23iNo1" sboTerm="SBO:0000176" id="R_HACD23iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__5Z__dodedecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hddccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD24iNo1" sboTerm="SBO:0000176" id="R_HACD24iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__9Z__octadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hodecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oodecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD25iNo1" sboTerm="SBO:0000176" id="R_HACD25iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__7Z__hexadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdd7coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohdd7coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD26iNo1" sboTerm="SBO:0000176" id="R_HACD26iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__5Z__tetradecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD27iNo1" sboTerm="SBO:0000176" id="R_HACD27iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__6Z__octadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hptslacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3optslacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD28iNo1" sboTerm="SBO:0000176" id="R_HACD28iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__4Z__hexadecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdd4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohdd4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD29iNo1" sboTerm="SBO:0000176" id="R_HACD29iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__9Z_12Z__octadec_dienyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hlnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3olnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD2iNo1" sboTerm="SBO:0000176" id="R_HACD2iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxohexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD30iNo1" sboTerm="SBO:0000176" id="R_HACD30iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__7Z_10Z__hexadec_dienyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhd710coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohd710coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD31iNo1" sboTerm="SBO:0000176" id="R_HACD31iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__5Z_8Z__tetradec_dienyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD32iNo1" sboTerm="SBO:0000176" id="R_HACD32iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__6Z__dodedecenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD33iNo1" sboTerm="SBO:0000176" id="R_HACD33iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxo__4Z__decenyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD3iNo1" sboTerm="SBO:0000176" id="R_HACD3iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxooctanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD4iNo1" sboTerm="SBO:0000176" id="R_HACD4iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxodecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD5iNo1" sboTerm="SBO:0000176" id="R_HACD5iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxododecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD6iNo1" sboTerm="SBO:0000176" id="R_HACD6iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxotetradecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3htdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3otdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD7iNo1" sboTerm="SBO:0000176" id="R_HACD7iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxohexadecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD8iNo1" sboTerm="SBO:0000176" id="R_HACD8iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxooctadecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hodcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohodcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HACD9iNo1" sboTerm="SBO:0000176" id="R_HACD9iNo1" name="3_hydroxyacyl_CoA_dehydrogenase__3_oxovaleryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS5" stoichiometry="5.9081e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3optcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2214"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HADPCOADH3No1" sboTerm="SBO:0000176" id="R_HADPCOADH3No1" name="3_hydroxyadipyl_CoA_dehydrogenase__NAD_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hadpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS1" stoichiometry="6.105e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3282"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HCO3ENo1" sboTerm="SBO:0000176" id="R_HCO3ENo1" name="HCO3_equilibration_reaction (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RM9" stoichiometry="3.3752e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEPK1_ktNo1" sboTerm="SBO:0000176" id="R_HEPK1_ktNo1" name="LPS_heptose_kinase_I__P_putida_LPS_core_synthesis_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hhlipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ0" stoichiometry="8.4175e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hphlipa_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0344"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEPT1_ktNo1" sboTerm="SBO:0000176" id="R_HEPT1_ktNo1" name="heptosyltransferase_I__LPS_core_synthesis_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adphep_LD_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipa_oh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ2" stoichiometry="5.5071e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hlipa_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0342"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEPT2_ktNo1" sboTerm="SBO:0000176" id="R_HEPT2_ktNo1" name="heptosyltransferase_II__LPS_core_synthesis_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adphep_LD_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hlipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ3" stoichiometry="5.9102e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hhlipa_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0341"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HEX1No1" sboTerm="SBO:0000176" id="R_HEX1No1" name="hexokinase__D_glucoseATP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P42" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1011"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HIBDktNo1" sboTerm="SBO:0000176" id="R_HIBDktNo1" name="3_hydroxyisobutyrate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E02" stoichiometry="4.7241e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mmtsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4666"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HISGLYabcpp" sboTerm="SBO:0000176" id="R_arm_HISGLYabcpp" name="L_Histidinylglycine__His_Gly__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hisgly_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HISGLYabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISGLYabcppNo1" sboTerm="SBO:0000176" id="R_HISGLYabcppNo1" name="L_Histidinylglycine__His_Gly__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_HISGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hisgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISGLYabcppNo2" sboTerm="SBO:0000176" id="R_HISGLYabcppNo2" name="L_Histidinylglycine__His_Gly__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_HISGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hisgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISGLYabcppNo3" sboTerm="SBO:0000176" id="R_HISGLYabcppNo3" name="L_Histidinylglycine__His_Gly__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_HISGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hisgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISGLYtexNo1" sboTerm="SBO:0000176" id="R_HISGLYtexNo1" name="L_Histidinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hisgly_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hisgly_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HISHISabcpp" sboTerm="SBO:0000176" id="R_arm_HISHISabcpp" name="L_Histidinylhistidine__His_His__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hishis_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HISHISabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISHISabcppNo1" sboTerm="SBO:0000176" id="R_HISHISabcppNo1" name="L_Histidinylhistidine__His_His__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_HISHISabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hishis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISHISabcppNo2" sboTerm="SBO:0000176" id="R_HISHISabcppNo2" name="L_Histidinylhistidine__His_His__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_HISHISabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hishis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISHISabcppNo3" sboTerm="SBO:0000176" id="R_HISHISabcppNo3" name="L_Histidinylhistidine__His_His__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_HISHISabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hishis_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISHIStexNo1" sboTerm="SBO:0000176" id="R_HISHIStexNo1" name="L_Histidinylhistidine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hishis_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hishis_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HIStexNo1" sboTerm="SBO:0000176" id="R_HIStexNo1" name="L_histidine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_his__L_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PP9" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_his__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0799"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HIUHYNo1" sboTerm="SBO:0000176" id="R_HIUHYNo1" name="hydroxyisourate_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5hiu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F14" stoichiometry="1.615e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5houdic_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4285"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HMGLNo1" sboTerm="SBO:0000176" id="R_HMGLNo1" name="hydroxymethylglutaryl_CoA_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hmgcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H25" stoichiometry="1.7581e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3540"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HPPK" sboTerm="SBO:0000176" id="R_arm_HPPK" name="2_amino_4_hydroxy_6_hydroxymethyldihydropteridine_diphosphokinase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2ahhmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HPPK" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4698"/> <fbc:geneProductRef fbc:geneProduct="PP_0393"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HPPKNo1" sboTerm="SBO:0000176" id="R_HPPKNo1" name="2_amino_4_hydroxy_6_hydroxymethyldihydropteridine_diphosphokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_HPPK" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DX0" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ahhmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4698"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HPPKNo2" sboTerm="SBO:0000176" id="R_HPPKNo2" name="2_amino_4_hydroxy_6_hydroxymethyldihydropteridine_diphosphokinase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_HPPK" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QU3" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ahhmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0393"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HPYRINo1" sboTerm="SBO:0000176" id="R_HPYRINo1" name="hydroxypyruvate_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F02" stoichiometry="2.0126e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2h3oppan_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4298"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HPYRRyNo1" sboTerm="SBO:0000176" id="R_HPYRRyNo1" name="Hydroxypyruvate_reductase__NADPH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F00" stoichiometry="1.1111e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4300"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HSDy" sboTerm="SBO:0000176" id="R_arm_HSDy" name="homoserine_dehydrogenase__NADPH_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HSDy" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0664"/> <fbc:geneProductRef fbc:geneProduct="PP_1470"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HSDyNo1" sboTerm="SBO:0000176" id="R_HSDyNo1" name="homoserine_dehydrogenase__NADPH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_HSDy" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q34" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HSDyNo2" sboTerm="SBO:0000176" id="R_HSDyNo2" name="homoserine_dehydrogenase__NADPH_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_HSDy" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MU8" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1470"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HSKNo1" sboTerm="SBO:0000176" id="R_HSKNo1" name="homoserine_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RK8" stoichiometry="6.8083e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phom_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0121"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HXANDNo1" sboTerm="SBO:0000176" id="R_HXANDNo1" name="hypoxanthine_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F20" stoichiometry="0.00037037" constant="true"/> <speciesReference species="M_prot_Q88F21" stoichiometry="0.00037037" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4278"/> <fbc:geneProductRef fbc:geneProduct="PP_4279"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HYGBDIASNo1" sboTerm="SBO:0000176" id="R_HYGBDIASNo1" name="hydrogenobyrinic_acid_a_c_diamide_synthase__glutamine_hydrolysing_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hgbyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA1" stoichiometry="0.0042735" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="2" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_hgbam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1673"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_I2FE2SRNo1" sboTerm="SBO:0000176" id="R_I2FE2SRNo1" name="ISC_2Fe_2S_regeneration (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2fe1s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscssh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K56" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_prot_Q88PK7" stoichiometry="0.0027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscu_2fe2s_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_I2FE2SS2fdx" sboTerm="SBO:0000176" id="R_arm_I2FE2SS2fdx" name="ISC_2Fe_2S_Synthesis_II (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscssh_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscu_2fe2s_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_I2FE2SS2fdx" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_0844"/> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0842"/> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_I2FE2SS2fdxNo1" sboTerm="SBO:0000176" id="R_I2FE2SS2fdxNo1" name="ISC_2Fe_2S_Synthesis_II (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PK3" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_pmet_I2FE2SS2fdx" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PK6" stoichiometry="0.0027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscs_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscu_2fe2s2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_0844"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_I2FE2SS2fdxNo2" sboTerm="SBO:0000176" id="R_I2FE2SS2fdxNo2" name="ISC_2Fe_2S_Synthesis_II (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K56" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_prot_Q88PK7" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_pmet_I2FE2SS2fdx" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscs_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscu_2fe2s2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_I2FE2SSfdx" sboTerm="SBO:0000176" id="R_arm_I2FE2SSfdx" name="ISC_2Fe_2S_Synthesis (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxr_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscssh_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscu_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_I2FE2SSfdx" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_0844"/> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0842"/> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_I2FE2SSfdxNo1" sboTerm="SBO:0000176" id="R_I2FE2SSfdxNo1" name="ISC_2Fe_2S_Synthesis (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PK3" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_prot_Q88PK6" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_pmet_I2FE2SSfdx" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscs_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscu_2fe2s_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_0844"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_I2FE2SSfdxNo2" sboTerm="SBO:0000176" id="R_I2FE2SSfdxNo2" name="ISC_2Fe_2S_Synthesis (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K56" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_prot_Q88PK7" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_pmet_I2FE2SSfdx" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_iscs_c" stoichiometry="2" constant="true"/> <speciesReference species="M_iscu_2fe2s_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> <fbc:geneProductRef fbc:geneProduct="PP_0843"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ICDHyr" sboTerm="SBO:0000176" id="R_arm_ICDHyr" name="isocitrate_dehydrogenase__NADP_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ICDHyr" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4012"/> <fbc:geneProductRef fbc:geneProduct="PP_4011"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICDHyrNo1" sboTerm="SBO:0000176" id="R_ICDHyrNo1" name="isocitrate_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ICDHyr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FS1" stoichiometry="2.6107e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4012"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICDHyrNo2" sboTerm="SBO:0000176" id="R_ICDHyrNo2" name="isocitrate_dehydrogenase__NADP_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ICDHyr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FS2" stoichiometry="2.6107e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4011"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ICITtex" sboTerm="SBO:0000176" id="R_arm_ICITtex" name="isocitrate_transport__external (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ICITtex" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICITtexNo1" sboTerm="SBO:0000176" id="R_ICITtexNo1" name="isocitrate_transport__external (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MZ9" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_ICITtex" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICITtexNo2" sboTerm="SBO:0000176" id="R_ICITtexNo2" name="isocitrate_transport__external (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L77" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_ICITtex" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICLNo1" sboTerm="SBO:0000176" id="R_ICLNo1" name="Isocitrate_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FI0" stoichiometry="2.8316e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4116"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICYSDSNo1" sboTerm="SBO:0000176" id="R_ICYSDSNo1" name="ISC_Cysteine_desulfuration (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K56" stoichiometry="0.0027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscssh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILETANo1" sboTerm="SBO:0000176" id="R_ILETANo1" name="isoleucine_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H54" stoichiometry="3.5613e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3511"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IMPDNo1" sboTerm="SBO:0000176" id="R_IMPDNo1" name="IMP_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P22" stoichiometry="0.00013228" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1031"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_INSHNo1" sboTerm="SBO:0000176" id="R_INSHNo1" name="Inosine_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ins_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K32" stoichiometry="5.6805e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hxan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2460"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPDDINo1" sboTerm="SBO:0000176" id="R_IPDDINo1" name="isopentenyl_diphosphate_D_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ipdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QC9" stoichiometry="6.2143e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0565"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ISETACabcpp" sboTerm="SBO:0000176" id="R_arm_ISETACabcpp" name="isethionate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_isetac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ISETACabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ISETACabcppNo1" sboTerm="SBO:0000176" id="R_ISETACabcppNo1" name="isethionate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ISETACabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_isetac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ISETACabcppNo2" sboTerm="SBO:0000176" id="R_ISETACabcppNo2" name="isethionate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ISETACabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_isetac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ISETACtexNo1" sboTerm="SBO:0000176" id="R_ISETACtexNo1" name="isethionate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_isetac_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_isetac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ISOAMLNo1" sboTerm="SBO:0000176" id="R_ISOAMLNo1" name="isoamylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_bglyg4n_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FN4" stoichiometry="0.0058113" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_maltttr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4055"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAS14No1" sboTerm="SBO:0000176" id="R_KAS14No1" name="beta_ketoacyl_ACP_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_actACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_KAS15" sboTerm="SBO:0000176" id="R_arm_KAS15" name="beta_ketoacyl_ACP_synthase__2_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_KAS15" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4379"/> <fbc:geneProductRef fbc:geneProduct="PP_4545"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAS15No1" sboTerm="SBO:0000176" id="R_KAS15No1" name="beta_ketoacyl_ACP_synthase__2_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_KAS15" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88ES4" stoichiometry="9.9206e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4379"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAS15No2" sboTerm="SBO:0000176" id="R_KAS15No2" name="beta_ketoacyl_ACP_synthase__2_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_KAS15" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EC1" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT1No1" sboTerm="SBO:0000176" id="R_KAT1No1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT10No1" sboTerm="SBO:0000176" id="R_KAT10No1" name="acetyl_CoA_C_acyltransferase__3_oxoheptaryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT11No1" sboTerm="SBO:0000176" id="R_KAT11No1" name="acetyl_CoA_C_acyltransferase__3_oxononaryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ononacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT19No1" sboTerm="SBO:0000176" id="R_KAT19No1" name="acetyl_CoA_C_acyltransferase__3_oxo_6_acetylthiohexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3o6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT2No1" sboTerm="SBO:0000176" id="R_KAT2No1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_btcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT20No1" sboTerm="SBO:0000176" id="R_KAT20No1" name="acetyl_CoA_C_acyltransferase__cis_hexadec_9_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ovacccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT21No1" sboTerm="SBO:0000176" id="R_KAT21No1" name="acetyl_CoA_C_acyltransferase__cis_tetradec_7_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT22No1" sboTerm="SBO:0000176" id="R_KAT22No1" name="acetyl_CoA_C_acyltransferase__cis_dodedec_5_enoyl_CoA__C121d5_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3otdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT23No1" sboTerm="SBO:0000176" id="R_KAT23No1" name="acetyl_CoA_C_acyltransferase__cis_dec_3_enoyl_CoA__C101d3_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oddccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_decoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT24No1" sboTerm="SBO:0000176" id="R_KAT24No1" name="acetyl_CoA_C_acyltransferase__cis_hexadec_7_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oodecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd7coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT25No1" sboTerm="SBO:0000176" id="R_KAT25No1" name="acetyl_CoA_C_acyltransferase__cis_tetradec_5_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohdd7coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT26No1" sboTerm="SBO:0000176" id="R_KAT26No1" name="acetyl_CoA_C_acyltransferase__cis_dodedec_3_enoyl_CoA__C121d3_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3odd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dded3coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT27No1" sboTerm="SBO:0000176" id="R_KAT27No1" name="acetyl_CoA_C_acyltransferase__cis_hexadec_4_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3optslacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd4coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT28No1" sboTerm="SBO:0000176" id="R_KAT28No1" name="acetyl_CoA_C_acyltransferase__cis_tetradec_2_enoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohdd4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tde_2Z_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT29No1" sboTerm="SBO:0000176" id="R_KAT29No1" name="acetyl_CoA_C_acyltransferase__cis_cis_hexadec_7_10_dienoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3olnlccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd_7_10_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT3No1" sboTerm="SBO:0000176" id="R_KAT3No1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT30No1" sboTerm="SBO:0000176" id="R_KAT30No1" name="acetyl_CoA_C_acyltransferase__cis_cis_tetradec_5_8_dienoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohd710coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td_5_8_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT31No1" sboTerm="SBO:0000176" id="R_KAT31No1" name="acetyl_CoA_C_acyltransferase__cis_cis_dodedec_3_6_dienoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dd_3_6_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT32No1" sboTerm="SBO:0000176" id="R_KAT32No1" name="acetyl_CoA_C_acyltransferase__4_cis_decenoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3odd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dec4coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT4No1" sboTerm="SBO:0000176" id="R_KAT4No1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3odcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT5No1" sboTerm="SBO:0000176" id="R_KAT5No1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT6No1" sboTerm="SBO:0000176" id="R_KAT6No1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3otdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT7No1" sboTerm="SBO:0000176" id="R_KAT7No1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACT8rNo1" sboTerm="SBO:0000176" id="R_ACACT8rNo1" name="3_ketoacyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohodcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KAT9No1" sboTerm="SBO:0000176" id="R_KAT9No1" name="acetyl_CoA_C_acyltransferase__3_oxovaleryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3optcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS4" stoichiometry="5.5556e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2215"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KDOPPNo1" sboTerm="SBO:0000176" id="R_KDOPPNo1" name="3_deoxy_manno_octulosonate_8_phosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdo8p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P96" stoichiometry="0.00035613" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_kdo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0956"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_KabcppNo1" sboTerm="SBO:0000176" id="R_KabcppNo1" name="Potassium_ABC_transporter__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FWL1" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_k_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4160"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LALALGLUtexNo1" sboTerm="SBO:0000176" id="R_LALALGLUtexNo1" name="L_alanyl_L_glutamate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaLglu_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LALGPNo1" sboTerm="SBO:0000176" id="R_LALGPNo1" name="L_alanyl_gamma_L_glutamate_peptidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_LalaLglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LB8" stoichiometry="3.655e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2017"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_LCADi" sboTerm="SBO:0000176" id="R_arm_LCADi" name="lactaldehyde_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lald__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_LCADi" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LCADiNo1" sboTerm="SBO:0000176" id="R_LCADiNo1" name="lactaldehyde_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE9" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_LCADi" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_lac__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LCADiNo2" sboTerm="SBO:0000176" id="R_LCADiNo2" name="lactaldehyde_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JF5" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_LCADi" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_lac__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LDH_DNo1" sboTerm="SBO:0000176" id="R_LDH_DNo1" name="D_lactate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MC4" stoichiometry="3.1566e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1649"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_LDH_D2" sboTerm="SBO:0000176" id="R_arm_LDH_D2" name="D_lactate_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_LDH_D2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4737"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3745"/> <fbc:geneProductRef fbc:geneProduct="PP_3746"/> <fbc:geneProductRef fbc:geneProduct="PP_3747"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LDH_D2No1" sboTerm="SBO:0000176" id="R_LDH_D2No1" name="D_lactate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_LDH_D2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DT2" stoichiometry="2.01e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4737"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LDH_D2No2" sboTerm="SBO:0000176" id="R_LDH_D2No2" name="D_lactate_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GH6" stoichiometry="5.1251e-05" constant="true"/> <speciesReference species="M_prot_Q88GH7" stoichiometry="5.1251e-05" constant="true"/> <speciesReference species="M_prot_Q88GH8" stoichiometry="5.1251e-05" constant="true"/> <speciesReference species="M_pmet_LDH_D2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3745"/> <fbc:geneProductRef fbc:geneProduct="PP_3746"/> <fbc:geneProductRef fbc:geneProduct="PP_3747"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_LEULEUabcpp" sboTerm="SBO:0000176" id="R_arm_LEULEUabcpp" name="L_leucylleucine__leuleu__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leuleu_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_LEULEUabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEULEUabcppNo1" sboTerm="SBO:0000176" id="R_LEULEUabcppNo1" name="L_leucylleucine__leuleu__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_LEULEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leuleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEULEUabcppNo2" sboTerm="SBO:0000176" id="R_LEULEUabcppNo2" name="L_leucylleucine__leuleu__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_LEULEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leuleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEULEUabcppNo3" sboTerm="SBO:0000176" id="R_LEULEUabcppNo3" name="L_leucylleucine__leuleu__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_LEULEUabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leuleu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEULEUtexNo1" sboTerm="SBO:0000176" id="R_LEULEUtexNo1" name="leucylleucine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_leuleu_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_leuleu_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUTANo1" sboTerm="SBO:0000176" id="R_LEUTANo1" name="leucine_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H54" stoichiometry="3.5613e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3511"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LGTHLNo1" sboTerm="SBO:0000176" id="R_LGTHLNo1" name="lactoylglutathione_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mthgxl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GF8" stoichiometry="1.025e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lgt__S_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3766"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_LIPAH" sboTerm="SBO:0000176" id="R_arm_LIPAH" name="Kdo_2__hexa_acyl_lipid_A_hydroxylase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="2" constant="true"/> <speciesReference species="M_lipa_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_LIPAH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2423"/> <fbc:geneProductRef fbc:geneProduct="PP_4570"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LIPAHNo1" sboTerm="SBO:0000176" id="R_LIPAHNo1" name="Kdo_2__hexa_acyl_lipid_A_hydroxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_LIPAH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K68" stoichiometry="1.6984e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_lipa_oh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2423"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LIPAHNo2" sboTerm="SBO:0000176" id="R_LIPAHNo2" name="Kdo_2__hexa_acyl_lipid_A_hydroxylase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_LIPAH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E96" stoichiometry="1.6984e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="2" constant="true"/> <speciesReference species="M_lipa_oh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4570"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPCOXcNo1" sboTerm="SBO:0000176" id="R_LPCOXcNo1" name="L_Pipecolateoxygen_1_6_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_Lpipecol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CC4" stoichiometry="2.2584e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thp2c_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5257"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1E160ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1E160ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoethanolamine__n_C160___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpe160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1E161ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1E161ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoethanolamine__n_C161___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpe161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1E180ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1E180ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoethanolamine__n_C180___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpe180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1E181d11ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1E181d11ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoethanolamine__n_C181___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpe181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1G160ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1G160ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C160___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpg160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pg_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1G161ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1G161ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C161___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpg161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pg_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1G180ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1G180ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C180___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpg180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pg_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPLIPAL1G181d11ppNo1" sboTerm="SBO:0000176" id="R_LPLIPAL1G181d11ppNo1" name="Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C181___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1agpg181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KH2" stoichiometry="1.4065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3pg_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h_p" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2318"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LPSGTR1_ktNo1" sboTerm="SBO:0000176" id="R_LPSGTR1_ktNo1" name="galactosyltransferase__LPS_core_synthesis___galactosyl__1_3Hep1__heptosyl__1_3__heptosyl__1_5__kdo2_lipidA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_icore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ1" stoichiometry="5.5071e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_galicore_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0343"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LSERDHrNo1" sboTerm="SBO:0000176" id="R_LSERDHrNo1" name="L_serine_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DG3" stoichiometry="4.8225e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2amsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4862"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LTDCLNo1" sboTerm="SBO:0000176" id="R_LTDCLNo1" name="L_Tryptophan_decarboxy_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JU5" stoichiometry="0.00015432" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trypta_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2552"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYSDCNo1" sboTerm="SBO:0000176" id="R_LYSDCNo1" name="lysine_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FWL0" stoichiometry="4.3676e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_15dap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4140"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYSMONo1" sboTerm="SBO:0000176" id="R_LYSMONo1" name="lysine_oxygenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QV1" stoichiometry="8.0051e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5apentam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0383"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_LYSabcpp" sboTerm="SBO:0000176" id="R_arm_LYSabcpp" name="L_lysine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_LYSabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0280"/> <fbc:geneProductRef fbc:geneProduct="PP_0281"/> <fbc:geneProductRef fbc:geneProduct="PP_0282"/> <fbc:geneProductRef fbc:geneProduct="PP_0283"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3593"/> <fbc:geneProductRef fbc:geneProduct="PP_3594"/> <fbc:geneProductRef fbc:geneProduct="PP_3595"/> <fbc:geneProductRef fbc:geneProduct="PP_3597"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYSabcppNo1" sboTerm="SBO:0000176" id="R_LYSabcppNo1" name="L_lysine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EH7" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EI0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_LYSabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYSabcppNo2" sboTerm="SBO:0000176" id="R_LYSabcppNo2" name="L_lysine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R51" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R52" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R53" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R54" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_LYSabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0280"/> <fbc:geneProductRef fbc:geneProduct="PP_0281"/> <fbc:geneProductRef fbc:geneProduct="PP_0282"/> <fbc:geneProductRef fbc:geneProduct="PP_0283"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYSabcppNo3" sboTerm="SBO:0000176" id="R_LYSabcppNo3" name="L_lysine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GX2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GX3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GX4" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_LYSabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3593"/> <fbc:geneProductRef fbc:geneProduct="PP_3594"/> <fbc:geneProductRef fbc:geneProduct="PP_3595"/> <fbc:geneProductRef fbc:geneProduct="PP_3597"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYStexNo1" sboTerm="SBO:0000176" id="R_LYStexNo1" name="L_lysine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lys__L_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NK1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lys__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1206"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MACACINo1" sboTerm="SBO:0000176" id="R_MACACINo1" name="maleylacetoacetate_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4mlacac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E49" stoichiometry="5.9866e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4fumacac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4619"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MACPDNo1" sboTerm="SBO:0000176" id="R_MACPDNo1" name="Malonyl_ACP_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAL1KNo1" sboTerm="SBO:0000176" id="R_MAL1KNo1" name="maltokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FN0" stoichiometry="1.2237e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malt1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4059"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MALCOAMTNo1" sboTerm="SBO:0000176" id="R_MALCOAMTNo1" name="Malonyl_CoA_methyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QW9" stoichiometry="1.2346e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malcoame_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0365"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MALTTNo1" sboTerm="SBO:0000176" id="R_MALTTNo1" name="maltosyltransferase__4_units_specific_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_malt1p_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88FM9" stoichiometry="5.2214e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyg4n_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4060"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAN1PT2No1" sboTerm="SBO:0000176" id="R_MAN1PT2No1" name="mannose_1_phosphate_guanylyltransferase__GDP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M00" stoichiometry="1.418e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdpmann_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1776"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAN6PINo1" sboTerm="SBO:0000176" id="R_MAN6PINo1" name="mannose_6_phosphate_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M00" stoichiometry="1.418e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1776"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MANENo1" sboTerm="SBO:0000176" id="R_MANENo1" name="Manose_epimerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_man_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P39" stoichiometry="8.0167e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1014"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MBCOAiNo1" sboTerm="SBO:0000176" id="R_MBCOAiNo1" name="3_Methylbutanoyl_CoA_acceptor__2_3_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ivcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FM5" stoichiometry="0.00011721" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4064"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCCCNo1" sboTerm="SBO:0000176" id="R_MCCCNo1" name="methylcrotonoyl_CoA_carboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3mb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FM2" stoichiometry="6.9444e-05" constant="true"/> <speciesReference species="M_prot_Q88FM4" stoichiometry="6.9444e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mgcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4065"/> <fbc:geneProductRef fbc:geneProduct="PP_4067"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCITDNo1" sboTerm="SBO:0000176" id="R_MCITDNo1" name="2_methylcitrate_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2mcit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KF2" stoichiometry="0.0003858" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mcacn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2338"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCITL2No1" sboTerm="SBO:0000176" id="R_MCITL2No1" name="methylisocitrate_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_micit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KF6" stoichiometry="2.6455e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2334"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCOATANo1" sboTerm="SBO:0000176" id="R_MCOATANo1" name="Malonyl_CoA_ACP_transacylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL7" stoichiometry="1.7581e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1913"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCSNAHNo1" sboTerm="SBO:0000176" id="R_MCSNAHNo1" name="5_Methylcytosine_aminohydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5mcsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I13" stoichiometry="0.00027871" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thym_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MCTP1App" sboTerm="SBO:0000176" id="R_arm_MCTP1App" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MCTP1App" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> <fbc:geneProductRef fbc:geneProduct="PP_3741"/> <fbc:geneProductRef fbc:geneProduct="PP_4807"/> <fbc:geneProductRef fbc:geneProduct="PP_1331"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP1AppNo1" sboTerm="SBO:0000176" id="R_MCTP1AppNo1" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MCTP1App" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CU6" stoichiometry="7.9365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP1AppNo2" sboTerm="SBO:0000176" id="R_MCTP1AppNo2" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MCTP1App" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DY5" stoichiometry="7.9365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP1AppNo3" sboTerm="SBO:0000176" id="R_MCTP1AppNo3" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MCTP1App" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GI2" stoichiometry="7.9365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3741"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP1AppNo4" sboTerm="SBO:0000176" id="R_MCTP1AppNo4" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MCTP1App" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DL8" stoichiometry="7.9365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4807"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP1AppNo5" sboTerm="SBO:0000176" id="R_MCTP1AppNo5" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MCTP1App" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N82" stoichiometry="7.9365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1331"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MCTP1Bpp" sboTerm="SBO:0000176" id="R_arm_MCTP1Bpp" name="murein_crosslinking_transpeptidase_1B_A2pm_A2pm___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MCTP1Bpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP1BppNo1" sboTerm="SBO:0000176" id="R_MCTP1BppNo1" name="murein_crosslinking_transpeptidase_1B_A2pm_A2pm___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CU6" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MCTP1Bpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px3p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP1BppNo2" sboTerm="SBO:0000176" id="R_MCTP1BppNo2" name="murein_crosslinking_transpeptidase_1B_A2pm_A2pm___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DY5" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MCTP1Bpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px3p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MCTP2App" sboTerm="SBO:0000176" id="R_arm_MCTP2App" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein5p5p5p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MCTP2App" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1331"/> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> <fbc:geneProductRef fbc:geneProduct="PP_3741"/> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP2AppNo1" sboTerm="SBO:0000176" id="R_MCTP2AppNo1" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88N82" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MCTP2App" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5px4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1331"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP2AppNo2" sboTerm="SBO:0000176" id="R_MCTP2AppNo2" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CU6" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MCTP2App" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5px4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP2AppNo3" sboTerm="SBO:0000176" id="R_MCTP2AppNo3" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GI2" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MCTP2App" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5px4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3741"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCTP2AppNo4" sboTerm="SBO:0000176" id="R_MCTP2AppNo4" name="murein_crosslinking_transpeptidase_1A_A2pm_D_ala___periplasm_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DY5" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MCTP2App" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5px4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDCP1pp" sboTerm="SBO:0000176" id="R_arm_MDDCP1pp" name="murein_D_D_carboxypeptidase__murein5px4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDCP1pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP1ppNo1" sboTerm="SBO:0000176" id="R_MDDCP1ppNo1" name="murein_D_D_carboxypeptidase__murein5px4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MDDCP1pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DM2" stoichiometry="7.9365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP1ppNo2" sboTerm="SBO:0000176" id="R_MDDCP1ppNo2" name="murein_D_D_carboxypeptidase__murein5px4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MDDCP1pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L37" stoichiometry="7.9365e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDCP2pp" sboTerm="SBO:0000176" id="R_arm_MDDCP2pp" name="murein_D_D_carboxypeptidase__murein5px4px4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4px4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDCP2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP2ppNo1" sboTerm="SBO:0000176" id="R_MDDCP2ppNo1" name="murein_D_D_carboxypeptidase__murein5px4px4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP2ppNo2" sboTerm="SBO:0000176" id="R_MDDCP2ppNo2" name="murein_D_D_carboxypeptidase__murein5px4px4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DM2" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDCP3pp" sboTerm="SBO:0000176" id="R_arm_MDDCP3pp" name="murein_D_D_carboxypeptidase__murein5p5p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDCP3pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP3ppNo1" sboTerm="SBO:0000176" id="R_MDDCP3ppNo1" name="murein_D_D_carboxypeptidase__murein5p5p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP3pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP3ppNo2" sboTerm="SBO:0000176" id="R_MDDCP3ppNo2" name="murein_D_D_carboxypeptidase__murein5p5p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DM2" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP3pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDCP4pp" sboTerm="SBO:0000176" id="R_arm_MDDCP4pp" name="murein_D_D_carboxypeptidase__murein5p4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDCP4pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP4ppNo1" sboTerm="SBO:0000176" id="R_MDDCP4ppNo1" name="murein_D_D_carboxypeptidase__murein5p4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DM2" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP4pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP4ppNo2" sboTerm="SBO:0000176" id="R_MDDCP4ppNo2" name="murein_D_D_carboxypeptidase__murein5p4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP4pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDCP5pp" sboTerm="SBO:0000176" id="R_arm_MDDCP5pp" name="murein_D_D_carboxypeptidase__murein5p3p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p3p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDCP5pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP5ppNo1" sboTerm="SBO:0000176" id="R_MDDCP5ppNo1" name="murein_D_D_carboxypeptidase__murein5p3p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP5pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDCP5ppNo2" sboTerm="SBO:0000176" id="R_MDDCP5ppNo2" name="murein_D_D_carboxypeptidase__murein5p3p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DM2" stoichiometry="7.9365e-07" constant="true"/> <speciesReference species="M_pmet_MDDCP5pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDEP1pp" sboTerm="SBO:0000176" id="R_arm_MDDEP1pp" name="murein_D_D_endopeptidase__murein4px4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDEP1pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP1ppNo1" sboTerm="SBO:0000176" id="R_MDDEP1ppNo1" name="murein_D_D_endopeptidase__murein4px4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="1.9701e-07" constant="true"/> <speciesReference species="M_pmet_MDDEP1pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein4p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP1ppNo2" sboTerm="SBO:0000176" id="R_MDDEP1ppNo2" name="murein_D_D_endopeptidase__murein4px4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MDDEP1pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GD0" stoichiometry="1.9701e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein4p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDEP2pp" sboTerm="SBO:0000176" id="R_arm_MDDEP2pp" name="murein_D_D_endopeptidase__murein3px4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein3px4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDEP2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP2ppNo1" sboTerm="SBO:0000176" id="R_MDDEP2ppNo1" name="murein_D_D_endopeptidase__murein3px4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="1.9701e-07" constant="true"/> <speciesReference species="M_pmet_MDDEP2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein4p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP2ppNo2" sboTerm="SBO:0000176" id="R_MDDEP2ppNo2" name="murein_D_D_endopeptidase__murein3px4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GD0" stoichiometry="1.9701e-07" constant="true"/> <speciesReference species="M_pmet_MDDEP2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein4p3p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDEP3pp" sboTerm="SBO:0000176" id="R_arm_MDDEP3pp" name="murein_D_D_endopeptidase__murein5px4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5px4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDEP3pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP3ppNo1" sboTerm="SBO:0000176" id="R_MDDEP3ppNo1" name="murein_D_D_endopeptidase__murein5px4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="1.9701e-07" constant="true"/> <speciesReference species="M_pmet_MDDEP3pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein5p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP3ppNo2" sboTerm="SBO:0000176" id="R_MDDEP3ppNo2" name="murein_D_D_endopeptidase__murein5px4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GD0" stoichiometry="1.9701e-07" constant="true"/> <speciesReference species="M_pmet_MDDEP3pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein5p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MDDEP4pp" sboTerm="SBO:0000176" id="R_arm_MDDEP4pp" name="murein_D_D_endopeptidase__murein4px4px4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4px4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MDDEP4pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP4ppNo1" sboTerm="SBO:0000176" id="R_MDDEP4ppNo1" name="murein_D_D_endopeptidase__murein4px4px4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L37" stoichiometry="1.9701e-07" constant="true"/> <speciesReference species="M_pmet_MDDEP4pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein4px4p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2098"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MDDEP4ppNo2" sboTerm="SBO:0000176" id="R_MDDEP4ppNo2" name="murein_D_D_endopeptidase__murein4px4px4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GD0" stoichiometry="1.9701e-07" constant="true"/> <speciesReference species="M_pmet_MDDEP4pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_murein4px4p4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3794"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ME2No1" sboTerm="SBO:0000176" id="R_ME2No1" name="malic_enzyme__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CU5" stoichiometry="1.4415e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5085"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METGLNo1" sboTerm="SBO:0000176" id="R_METGLNo1" name="methionine_g_lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NA4" stoichiometry="3.5613e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ch4s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1308"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_METS" sboTerm="SBO:0000176" id="R_arm_METS" name="methionine_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5mthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_METS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2698"/> <fbc:geneProductRef fbc:geneProduct="PP_2375"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METSNo1" sboTerm="SBO:0000176" id="R_METSNo1" name="methionine_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_METS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JF1" stoichiometry="3.3347e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2698"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METSNo2" sboTerm="SBO:0000176" id="R_METSNo2" name="methionine_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_METS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB5" stoichiometry="3.3347e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2375"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_METSOXR1" sboTerm="SBO:0000176" id="R_arm_METSOXR1" name="L_methionine_S_oxide_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_METSOXR1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0336"/> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0336"/> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0336"/> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METSOXR1No1" sboTerm="SBO:0000176" id="R_METSOXR1No1" name="L_methionine_S_oxide_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CW1" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_pmet_METSOXR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LQ2" stoichiometry="1.9841e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METSOXR1No2" sboTerm="SBO:0000176" id="R_METSOXR1No2" name="L_methionine_S_oxide_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CG6" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_pmet_METSOXR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LQ2" stoichiometry="1.9841e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_METSOXR1No3" sboTerm="SBO:0000176" id="R_METSOXR1No3" name="L_methionine_S_oxide_reductase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QI2" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_pmet_METSOXR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LQ2" stoichiometry="1.9841e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_METSOXR2" sboTerm="SBO:0000176" id="R_arm_METSOXR2" name="L_methionine_R_sulfoxide_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_METSOXR2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0336"/> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0336"/> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0336"/> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METSOXR2No1" sboTerm="SBO:0000176" id="R_METSOXR2No1" name="L_methionine_R_sulfoxide_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CW1" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_prot_Q88LQ2" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_pmet_METSOXR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METSOXR2No2" sboTerm="SBO:0000176" id="R_METSOXR2No2" name="L_methionine_R_sulfoxide_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CG6" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_prot_Q88LQ2" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_pmet_METSOXR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_METSOXR2No3" sboTerm="SBO:0000176" id="R_METSOXR2No3" name="L_methionine_R_sulfoxide_reductase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QI2" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_prot_Q88LQ2" stoichiometry="1.9841e-05" constant="true"/> <speciesReference species="M_pmet_METSOXR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1877"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MG2uabcppNo1" sboTerm="SBO:0000176" id="R_MG2uabcppNo1" name="Magnesium__Mg2__ABC_transporter__ubtake__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mg2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JK4" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mg2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2645"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MGCHNo1" sboTerm="SBO:0000176" id="R_MGCHNo1" name="methylglutaconyl_CoA_hydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3mgcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FM3" stoichiometry="0.00013228" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hmgcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4066"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MI1PPNo1" sboTerm="SBO:0000176" id="R_MI1PPNo1" name="myo_inositol_1_phosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mi1p__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PL2" stoichiometry="1.0365e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0838"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MICITDrNo1" sboTerm="SBO:0000176" id="R_MICITDrNo1" name="2_methylisocitrate_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2mcacn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KF4" stoichiometry="5.2411e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_micit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2336"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MLTGY1pp" sboTerm="SBO:0000176" id="R_arm_MLTGY1pp" name="murein_lytic_transglycosylase__murein4p4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein4p4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MLTGY1pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY1ppNo1" sboTerm="SBO:0000176" id="R_MLTGY1ppNo1" name="murein_lytic_transglycosylase__murein4p4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MLTGY1pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DM0" stoichiometry="5.2312e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm4p_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY1ppNo2" sboTerm="SBO:0000176" id="R_MLTGY1ppNo2" name="murein_lytic_transglycosylase__murein4p4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MLTGY1pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L07" stoichiometry="3.7136e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm4p_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY1ppNo3" sboTerm="SBO:0000176" id="R_MLTGY1ppNo3" name="murein_lytic_transglycosylase__murein4p4p___periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MLTGY1pp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D56" stoichiometry="3.7136e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm4p_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MLTGY2pp" sboTerm="SBO:0000176" id="R_arm_MLTGY2pp" name="murein_lytic_transglycosylase__murein4p3p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein4p3p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MLTGY2pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY2ppNo1" sboTerm="SBO:0000176" id="R_MLTGY2ppNo1" name="murein_lytic_transglycosylase__murein4p3p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DM0" stoichiometry="5.2312e-05" constant="true"/> <speciesReference species="M_pmet_MLTGY2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm3p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY2ppNo2" sboTerm="SBO:0000176" id="R_MLTGY2ppNo2" name="murein_lytic_transglycosylase__murein4p3p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D56" stoichiometry="3.7136e-07" constant="true"/> <speciesReference species="M_pmet_MLTGY2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm3p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY2ppNo3" sboTerm="SBO:0000176" id="R_MLTGY2ppNo3" name="murein_lytic_transglycosylase__murein4p3p___periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L07" stoichiometry="3.7136e-07" constant="true"/> <speciesReference species="M_pmet_MLTGY2pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm3p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MLTGY3pp" sboTerm="SBO:0000176" id="R_arm_MLTGY3pp" name="murein_lytic_transglycosylase__murein3p3p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein3p3p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MLTGY3pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY3ppNo1" sboTerm="SBO:0000176" id="R_MLTGY3ppNo1" name="murein_lytic_transglycosylase__murein3p3p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DM0" stoichiometry="5.2312e-05" constant="true"/> <speciesReference species="M_pmet_MLTGY3pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm3p_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY3ppNo2" sboTerm="SBO:0000176" id="R_MLTGY3ppNo2" name="murein_lytic_transglycosylase__murein3p3p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D56" stoichiometry="3.7136e-07" constant="true"/> <speciesReference species="M_pmet_MLTGY3pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm3p_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY3ppNo3" sboTerm="SBO:0000176" id="R_MLTGY3ppNo3" name="murein_lytic_transglycosylase__murein3p3p___periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L07" stoichiometry="3.7136e-07" constant="true"/> <speciesReference species="M_pmet_MLTGY3pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm3p_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MLTGY4pp" sboTerm="SBO:0000176" id="R_arm_MLTGY4pp" name="murein_lytic_transglycosylase__murein4px4p4p___periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein4px4p4p_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MLTGY4pp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY4ppNo1" sboTerm="SBO:0000176" id="R_MLTGY4ppNo1" name="murein_lytic_transglycosylase__murein4px4p4p___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DM0" stoichiometry="5.2312e-05" constant="true"/> <speciesReference species="M_pmet_MLTGY4pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY4ppNo2" sboTerm="SBO:0000176" id="R_MLTGY4ppNo2" name="murein_lytic_transglycosylase__murein4px4p4p___periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D56" stoichiometry="3.7136e-07" constant="true"/> <speciesReference species="M_pmet_MLTGY4pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4971"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MLTGY4ppNo3" sboTerm="SBO:0000176" id="R_MLTGY4ppNo3" name="murein_lytic_transglycosylase__murein4px4p4p___periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L07" stoichiometry="3.7136e-07" constant="true"/> <speciesReference species="M_pmet_MLTGY4pp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_murein4px4p_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2130"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MMSAD3No1" sboTerm="SBO:0000176" id="R_MMSAD3No1" name="methylmalonate_semialdehyde_dehydrogenase__malonic_semialdehyde_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_msa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q97" stoichiometry="2.2046e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0597"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MMTSAONo1" sboTerm="SBO:0000176" id="R_MMTSAONo1" name="_S__Methylmalonate_semialdehydeNAD_oxidoreductase__CoA_propanoylating_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mmtsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E01" stoichiometry="2.2046e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4667"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOADSUxNo1" sboTerm="SBO:0000176" id="R_MOADSUxNo1" name="MoaD_sulfuration__nadh__assumed_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_iscssh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_moadamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K56" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_prot_Q88NB9" stoichiometry="0.0027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iscs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_moadcosh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> <fbc:geneProductRef fbc:geneProduct="PP_1293"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOAT2_ktNo1" sboTerm="SBO:0000176" id="R_MOAT2_ktNo1" name="3_deoxy_D_manno_octulosonic_acid_transferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ckdo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdolipid4_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D99" stoichiometry="1.9009e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdo2lipid4_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4928"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOAT_ktNo1" sboTerm="SBO:0000176" id="R_MOAT_ktNo1" name="3_deoxy_D_manno_octulosonic_acid_transferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ckdo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lipidA_kt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D99" stoichiometry="1.9009e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_kdolipid4_kt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4928"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOCOSNo1" sboTerm="SBO:0000176" id="R_MOCOSNo1" name="molybdenum_cofactor_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mobd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mptamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L14" stoichiometry="0.00011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_moco_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2123"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOTH1No1" sboTerm="SBO:0000176" id="R_MOTH1No1" name="maltooligosyltrehalose_trehalohydrolase__maltosyltrehalose_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malttre_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FN8" stoichiometry="2.2584e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tre_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4051"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MOTS1No1" sboTerm="SBO:0000176" id="R_MOTS1No1" name="maltooligosyltrehalose_synthase__maltotetraose_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_maltttr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FN6" stoichiometry="2.0129e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_malttre_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4053"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MPTG" sboTerm="SBO:0000176" id="R_arm_MPTG" name="murein_polymerizing_transglycosylase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_uaagmda_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MPTG" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0572"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5107"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTGNo1" sboTerm="SBO:0000176" id="R_MPTGNo1" name="murein_polymerizing_transglycosylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MPTG" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88QC2" stoichiometry="3.9683e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0572"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTGNo2" sboTerm="SBO:0000176" id="R_MPTGNo2" name="murein_polymerizing_transglycosylase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DY5" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_pmet_MPTG" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTGNo3" sboTerm="SBO:0000176" id="R_MPTGNo3" name="murein_polymerizing_transglycosylase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CU6" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_pmet_MPTG" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTGNo4" sboTerm="SBO:0000176" id="R_MPTGNo4" name="murein_polymerizing_transglycosylase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MPTG" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MPTG2" sboTerm="SBO:0000176" id="R_arm_MPTG2" name="murein_polymerizing_transglycosylase_2__three_linked_units_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_murein5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_uaagmda_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MPTG2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0572"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5107"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTG2No1" sboTerm="SBO:0000176" id="R_MPTG2No1" name="murein_polymerizing_transglycosylase_2__three_linked_units_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88QC2" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_pmet_MPTG2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0572"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTG2No2" sboTerm="SBO:0000176" id="R_MPTG2No2" name="murein_polymerizing_transglycosylase_2__three_linked_units_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DY5" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_pmet_MPTG2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTG2No3" sboTerm="SBO:0000176" id="R_MPTG2No3" name="murein_polymerizing_transglycosylase_2__three_linked_units_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CU6" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_pmet_MPTG2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5084"/> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTG2No4" sboTerm="SBO:0000176" id="R_MPTG2No4" name="murein_polymerizing_transglycosylase_2__three_linked_units_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88N77" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_prot_Q88Q94" stoichiometry="3.9683e-06" constant="true"/> <speciesReference species="M_pmet_MPTG2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_murein5p5p5p_p" stoichiometry="1" constant="true"/> <speciesReference species="M_udcpdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1336"/> <fbc:geneProductRef fbc:geneProduct="PP_0601"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTSNo1" sboTerm="SBO:0000176" id="R_MPTSNo1" name="molybdopterin_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cpmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_moadcosh_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88NB9" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_prot_Q88NB8" stoichiometry="0.0027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="5" constant="true"/> <speciesReference species="M_moadcoo_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mpt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1293"/> <fbc:geneProductRef fbc:geneProduct="PP_1294"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MPTSSNo1" sboTerm="SBO:0000176" id="R_MPTSSNo1" name="molybdopterin_synthase_sulfurylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_moadcoo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PW3" stoichiometry="0.00045537" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_moadamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0735"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MSO3abcpp" sboTerm="SBO:0000176" id="R_arm_MSO3abcpp" name="methanesulfonate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mso3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MSO3abcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MSO3abcppNo1" sboTerm="SBO:0000176" id="R_MSO3abcppNo1" name="methanesulfonate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_MSO3abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MSO3abcppNo2" sboTerm="SBO:0000176" id="R_MSO3abcppNo2" name="methanesulfonate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_MSO3abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MSO3texNo1" sboTerm="SBO:0000176" id="R_MSO3texNo1" name="methanesulfonate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_mso3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mso3_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTHFR2No1" sboTerm="SBO:0000176" id="R_MTHFR2No1" name="5_10_methylenetetrahydrofolate_reductase__NADH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D51" stoichiometry="5.0505e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5mthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4977"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MTI" sboTerm="SBO:0000176" id="R_arm_MTI" name="maltose_trehalose_isomerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_tre_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MTI" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4059"/> <fbc:geneProductRef fbc:geneProduct="PP_2918"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTINo1" sboTerm="SBO:0000176" id="R_MTINo1" name="maltose_trehalose_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FN0" stoichiometry="1.4807e-06" constant="true"/> <speciesReference species="M_pmet_MTI" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4059"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTINo2" sboTerm="SBO:0000176" id="R_MTINo2" name="maltose_trehalose_isomerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_MTI" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IT1" stoichiometry="1.4807e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2918"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MUCCYCINo1" sboTerm="SBO:0000176" id="R_MUCCYCINo1" name="muconate_cycloisomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ccmuac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK6" stoichiometry="3.6743e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mucl_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3715"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MUCCY_ktNo1" sboTerm="SBO:0000176" id="R_MUCCY_ktNo1" name="3_carboxy_cis_cis_muconate_cycloisomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_CCbuttc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N37" stoichiometry="1.0965e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4cml_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1379"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MUCLINo1" sboTerm="SBO:0000176" id="R_MUCLINo1" name="mucolactone_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_mucl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK7" stoichiometry="1.7541e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3714"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NACODANo1" sboTerm="SBO:0000176" id="R_NACODANo1" name="N_acetylornithine_deacetylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CJ5" stoichiometry="7.3099e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5186"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADH16ppNo1" sboTerm="SBO:0000176" id="R_NADH16ppNo1" name="NADH_dehydrogenase__ubiquinone_8__3_protons___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="4" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FG5" stoichiometry="1.8519e-07" constant="true"/> <speciesReference species="M_prot_Q88FG6" stoichiometry="1.8519e-07" constant="true"/> <speciesReference species="M_prot_Q88FG7" stoichiometry="1.8519e-07" constant="true"/> <speciesReference species="M_prot_Q88FG9" stoichiometry="1.8519e-07" constant="true"/> <speciesReference species="M_prot_Q88FH3" stoichiometry="1.8519e-07" constant="true"/> <speciesReference species="M_prot_Q88FH4" stoichiometry="1.8519e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_p" stoichiometry="3" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4122"/> <fbc:geneProductRef fbc:geneProduct="PP_4123"/> <fbc:geneProductRef fbc:geneProduct="PP_4127"/> <fbc:geneProductRef fbc:geneProduct="PP_4129"/> <fbc:geneProductRef fbc:geneProduct="PP_4130"/> <fbc:geneProductRef fbc:geneProduct="PP_4131"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_NADH5" sboTerm="SBO:0000176" id="R_arm_NADH5" name="NADH_dehydrogenase__ubiquinone_8__ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_NADH5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0626"/> <fbc:geneProductRef fbc:geneProduct="PP_3720"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADH5No1" sboTerm="SBO:0000176" id="R_NADH5No1" name="NADH_dehydrogenase__ubiquinone_8__ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_NADH5" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q70" stoichiometry="2.3742e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0626"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADH5No2" sboTerm="SBO:0000176" id="R_NADH5No2" name="NADH_dehydrogenase__ubiquinone_8__ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_NADH5" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK1" stoichiometry="2.3742e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3720"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADHPONo1" sboTerm="SBO:0000176" id="R_NADHPONo1" name="NADH_peroxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K52" stoichiometry="2.613e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2439"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_NADPHQR2" sboTerm="SBO:0000176" id="R_arm_NADPHQR2" name="NADPH_Quinone_Reductase__Ubiquinone_8_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_NADPHQR2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3606"/> <fbc:geneProductRef fbc:geneProduct="PP_0072"/> <fbc:geneProductRef fbc:geneProduct="PP_3720"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADPHQR2No1" sboTerm="SBO:0000176" id="R_NADPHQR2No1" name="NADPH_Quinone_Reductase__Ubiquinone_8_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_NADPHQR2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GW1" stoichiometry="7.5689e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3606"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADPHQR2No2" sboTerm="SBO:0000176" id="R_NADPHQR2No2" name="NADPH_Quinone_Reductase__Ubiquinone_8_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_NADPHQR2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RQ7" stoichiometry="7.5689e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0072"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADPHQR2No3" sboTerm="SBO:0000176" id="R_NADPHQR2No3" name="NADPH_Quinone_Reductase__Ubiquinone_8_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GK1" stoichiometry="7.5689e-06" constant="true"/> <speciesReference species="M_pmet_NADPHQR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3720"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NADTRHDNo1" sboTerm="SBO:0000176" id="R_NADTRHDNo1" name="NAD_transhydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FVX4" stoichiometry="3.4e-06" constant="true"/> <speciesReference species="M_prot_Q88RH4" stoichiometry="3.4e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0155"/> <fbc:geneProductRef fbc:geneProduct="PP_0156"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NFORGLUAH2No1" sboTerm="SBO:0000176" id="R_NFORGLUAH2No1" name="N_Formyl_L_glutamate_amidohydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_Nforglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D00" stoichiometry="8.4345e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5029"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_NI2uabcpp" sboTerm="SBO:0000176" id="R_arm_NI2uabcpp" name="nickel_transport_via_ABC_system__uptake__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_NI2uabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3342"/> <fbc:geneProductRef fbc:geneProduct="PP_3343"/> <fbc:geneProductRef fbc:geneProduct="PP_3344"/> <fbc:geneProductRef fbc:geneProduct="PP_3345"/> <fbc:geneProductRef fbc:geneProduct="PP_3346"/> </fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2645"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NI2uabcppNo1" sboTerm="SBO:0000176" id="R_NI2uabcppNo1" name="nickel_transport_via_ABC_system__uptake__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_NI2uabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HL2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88HL3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88HL4" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3342"/> <fbc:geneProductRef fbc:geneProduct="PP_3343"/> <fbc:geneProductRef fbc:geneProduct="PP_3344"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NI2uabcppNo2" sboTerm="SBO:0000176" id="R_NI2uabcppNo2" name="nickel_transport_via_ABC_system__uptake__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JK4" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_pmet_NI2uabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ni2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2645"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NMNDANo1" sboTerm="SBO:0000176" id="R_NMNDANo1" name="nicotinamide_nucleotide_amidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88ME5" stoichiometry="8.4175e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1628"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NMNNNo1" sboTerm="SBO:0000176" id="R_NMNNNo1" name="NMN_nucleosidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K32" stoichiometry="2.5602e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ncam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2460"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NMTHDANo1" sboTerm="SBO:0000176" id="R_NMTHDANo1" name="N_methylhydantoinase__ATP_hydrolysing_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mthd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H50" stoichiometry="9.1449e-08" constant="true"/> <speciesReference species="M_prot_Q88H51" stoichiometry="9.1449e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Ncarbsar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3515"/> <fbc:geneProductRef fbc:geneProduct="PP_3514"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NNDPRNo1" sboTerm="SBO:0000176" id="R_NNDPRNo1" name="nicotinate_nucleotide_diphosphorylase__carboxylating_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quln_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PR1" stoichiometry="4.6296e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0787"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_NO3abcpp" sboTerm="SBO:0000176" id="R_arm_NO3abcpp" name="NO3_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_NO3abcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0207"/> <fbc:geneProductRef fbc:geneProduct="PP_0209"/> <fbc:geneProductRef fbc:geneProduct="PP_0208"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3636"/> <fbc:geneProductRef fbc:geneProduct="PP_3637"/> <fbc:geneProductRef fbc:geneProduct="PP_3635"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NO3abcppNo1" sboTerm="SBO:0000176" id="R_NO3abcppNo1" name="NO3_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_NO3abcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RC3" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RC4" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RC5" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0207"/> <fbc:geneProductRef fbc:geneProduct="PP_0209"/> <fbc:geneProductRef fbc:geneProduct="PP_0208"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NO3abcppNo2" sboTerm="SBO:0000176" id="R_NO3abcppNo2" name="NO3_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_NO3abcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GT1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GT2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88GT3" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3636"/> <fbc:geneProductRef fbc:geneProduct="PP_3637"/> <fbc:geneProductRef fbc:geneProduct="PP_3635"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD10ppNo1" sboTerm="SBO:0000176" id="R_NTD10ppNo1" name="5__nucleotidase__XMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_xmp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> <speciesReference species="M_xtsn_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD11ppNo1" sboTerm="SBO:0000176" id="R_NTD11ppNo1" name="5__nucleotidase__IMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_imp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ins_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD12ppNo1" sboTerm="SBO:0000176" id="R_NTD12ppNo1" name="5__nucleotidase__dIMP___periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dimp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_din_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD1ppNo1" sboTerm="SBO:0000176" id="R_NTD1ppNo1" name="5__nucleotidase__dUMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dump_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_duri_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD2ppNo1" sboTerm="SBO:0000176" id="R_NTD2ppNo1" name="5__nucleotidase__UMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD3ppNo1" sboTerm="SBO:0000176" id="R_NTD3ppNo1" name="5__nucleotidase__dCMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dcmp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcyt_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD4ppNo1" sboTerm="SBO:0000176" id="R_NTD4ppNo1" name="5__nucleotidase__CMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cmp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cytd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD5ppNo1" sboTerm="SBO:0000176" id="R_NTD5ppNo1" name="5__nucleotidase__dTMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dtmp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> <speciesReference species="M_thymd_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD6ppNo1" sboTerm="SBO:0000176" id="R_NTD6ppNo1" name="5__nucleotidase__dAMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_damp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dad_2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD7ppNo1" sboTerm="SBO:0000176" id="R_NTD7ppNo1" name="5__nucleotidase__AMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="6.8587e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD8ppNo1" sboTerm="SBO:0000176" id="R_NTD8ppNo1" name="5__nucleotidase__dGMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dgmp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgsn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTD9ppNo1" sboTerm="SBO:0000176" id="R_NTD9ppNo1" name="5__nucleotidase__GMP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gmp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N04" stoichiometry="1.8618e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gsn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1414"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP1No1" sboTerm="SBO:0000176" id="R_NTPP1No1" name="Nucleoside_triphosphate_pyrophosphorylase__dgtp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dgtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="0.00037538" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP2No1" sboTerm="SBO:0000176" id="R_NTPP2No1" name="Nucleoside_triphosphate_pyrophosphorylase__gtp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="0.00086806" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP3No1" sboTerm="SBO:0000176" id="R_NTPP3No1" name="Nucleoside_triphosphate_pyrophosphorylase__dctp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="1.5964e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP4No1" sboTerm="SBO:0000176" id="R_NTPP4No1" name="Nucleoside_triphosphate_pyrophosphorylase__ctp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="1.0767e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP5No1" sboTerm="SBO:0000176" id="R_NTPP5No1" name="Nucleoside_triphosphate_pyrophosphorylase__datp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_datp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="6.0518e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_damp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP6No1" sboTerm="SBO:0000176" id="R_NTPP6No1" name="Nucleoside_triphosphate_pyrophosphorylase__atp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="1.615e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP7No1" sboTerm="SBO:0000176" id="R_NTPP7No1" name="Nucleoside_triphosphate_pyrophosphorylase__dttp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dttp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="6.4599e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dtmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTPP8No1" sboTerm="SBO:0000176" id="R_NTPP8No1" name="Nucleoside_triphosphate_pyrophosphorylase__utp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB7" stoichiometry="2.924e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1657"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NITRNo1" sboTerm="SBO:0000176" id="R_NITRNo1" name="nitrate_reductase__NADH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M71" stoichiometry="7.3099e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1703"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_NTRIR2xNo1" sboTerm="SBO:0000176" id="R_NTRIR2xNo1" name="nitrite_Reductase__NADH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="5" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="3" constant="true"/> <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M68" stoichiometry="2.1368e-06" constant="true"/> <speciesReference species="M_prot_Q88M69" stoichiometry="2.1368e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="3" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1705"/> <fbc:geneProductRef fbc:geneProduct="PP_1706"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OAADCNo1" sboTerm="SBO:0000176" id="R_OAADCNo1" name="oxaloacetate_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P29" stoichiometry="7.0146e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1024"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_OARGDC" sboTerm="SBO:0000176" id="R_arm_OARGDC" name="Oxoarginine_decarboxylase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5g2oxpt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_OARGDC" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1394"/> <fbc:geneProductRef fbc:geneProduct="PP_3723"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OARGDCNo1" sboTerm="SBO:0000176" id="R_OARGDCNo1" name="Oxoarginine_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_OARGDC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N22" stoichiometry="1.6633e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdbtal_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1394"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OARGDCNo2" sboTerm="SBO:0000176" id="R_OARGDCNo2" name="Oxoarginine_decarboxylase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_OARGDC" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FWH9" stoichiometry="1.6633e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gdbtal_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3723"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCOAT1No1" sboTerm="SBO:0000176" id="R_OCOAT1No1" name="3_oxoacid_CoA_transferase__Succinyl_CoA_acetoacetate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I78" stoichiometry="7.1786e-06" constant="true"/> <speciesReference species="M_prot_Q88I79" stoichiometry="7.1786e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3122"/> <fbc:geneProductRef fbc:geneProduct="PP_3123"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCOAT4No1" sboTerm="SBO:0000176" id="R_OCOAT4No1" name="3_oxoacid_CoA_transferase__Succinyl_CoA_dehydrocarnitine_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhcrn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I78" stoichiometry="7.1786e-06" constant="true"/> <speciesReference species="M_prot_Q88I79" stoichiometry="7.1786e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhcrncoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3122"/> <fbc:geneProductRef fbc:geneProduct="PP_3123"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OCTDPSNo1" sboTerm="SBO:0000176" id="R_OCTDPSNo1" name="Octaprenyl_pyrophosphate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_frdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ipdp_c" stoichiometry="5" constant="true"/> <speciesReference species="M_prot_Q88Q11" stoichiometry="0.00013889" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_octdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="5" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0687"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OGMEACPRNo1" sboTerm="SBO:0000176" id="R_OGMEACPRNo1" name="3_Oxo_glutaryl_ACP_methyl_ester_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ogmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hgmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_OGMEACPS" sboTerm="SBO:0000176" id="R_arm_OGMEACPS" name="3_Oxo_glutaryl_ACP_methyl_ester_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malcoame_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_OGMEACPS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4379"/> <fbc:geneProductRef fbc:geneProduct="PP_4545"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OGMEACPSNo1" sboTerm="SBO:0000176" id="R_OGMEACPSNo1" name="3_Oxo_glutaryl_ACP_methyl_ester_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88ES4" stoichiometry="9.9206e-06" constant="true"/> <speciesReference species="M_pmet_OGMEACPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ogmeACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4379"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OGMEACPSNo2" sboTerm="SBO:0000176" id="R_OGMEACPSNo2" name="3_Oxo_glutaryl_ACP_methyl_ester_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EC1" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_OGMEACPS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ogmeACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_5HPUDICDC_cNo1" sboTerm="SBO:0000176" id="R_5HPUDICDC_cNo1" name="2_oxo_4_hydroxy_4_carboxy_5_ureidoimidazoline_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5houdic_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F12" stoichiometry="2.0591e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alltn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4287"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OIVD1rNo1" sboTerm="SBO:0000176" id="R_OIVD1rNo1" name="2_oxoisovalerate_dehydrogenase__acylating_4_methyl_2_oxopentaoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EP9" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ0" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ1" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ2" stoichiometry="1.9608e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ivcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4401"/> <fbc:geneProductRef fbc:geneProduct="PP_4402"/> <fbc:geneProductRef fbc:geneProduct="PP_4403"/> <fbc:geneProductRef fbc:geneProduct="PP_4404"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OIVD2No1" sboTerm="SBO:0000176" id="R_OIVD2No1" name="2_oxoisovalerate_dehydrogenase__acylating_3_methyl_2_oxobutanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EP9" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ0" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ1" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ2" stoichiometry="1.9608e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ibcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4401"/> <fbc:geneProductRef fbc:geneProduct="PP_4402"/> <fbc:geneProductRef fbc:geneProduct="PP_4403"/> <fbc:geneProductRef fbc:geneProduct="PP_4404"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OIVD3No1" sboTerm="SBO:0000176" id="R_OIVD3No1" name="2_oxoisovalerate_dehydrogenase__acylating_3_methyl_2_oxopentanoate_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EP9" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ0" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ1" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ2" stoichiometry="1.9608e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4401"/> <fbc:geneProductRef fbc:geneProduct="PP_4402"/> <fbc:geneProductRef fbc:geneProduct="PP_4403"/> <fbc:geneProductRef fbc:geneProduct="PP_4404"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OPAHNo1" sboTerm="SBO:0000176" id="R_OPAHNo1" name="5_Oxoproline_amidohydrolase__ATP_hydrolysing___ir_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5oxpro_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88H50" stoichiometry="9.1449e-08" constant="true"/> <speciesReference species="M_prot_Q88H51" stoichiometry="9.1449e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3515"/> <fbc:geneProductRef fbc:geneProduct="PP_3514"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OPHBDCNo1" sboTerm="SBO:0000176" id="R_OPHBDCNo1" name="Octaprenyl_hydroxybenzoate_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ophb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE6" stoichiometry="5.9102e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2oph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0548"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OPHHXNo1" sboTerm="SBO:0000176" id="R_OPHHXNo1" name="2_Octaprenylphenol_hydroxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2oph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/> <speciesReference species="M_prot_A0A140FWS4" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2ohph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5013"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OPMEACPRNo1" sboTerm="SBO:0000176" id="R_OPMEACPRNo1" name="3_Oxo_pimeloyl_ACP_methyl_ester_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_opmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hpmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OPMEACPSNo1" sboTerm="SBO:0000176" id="R_OPMEACPSNo1" name="3_Oxo_pimeloyl_ACP_methyl_ester_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_opmeACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORN5ONo1" sboTerm="SBO:0000176" id="R_ORN5ONo1" name="L_ornithine_5_monooxygenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GC8" stoichiometry="2.4155e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_n5horn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3796"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ORNCD" sboTerm="SBO:0000176" id="R_arm_ORNCD" name="ornithine_cyclodeaminase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ORNCD" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3190"/> <fbc:geneProductRef fbc:geneProduct="PP_3533"/> <fbc:geneProductRef fbc:geneProduct="PP_4431"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORNCDNo1" sboTerm="SBO:0000176" id="R_ORNCDNo1" name="ornithine_cyclodeaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ORNCD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I12" stoichiometry="3.0082e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3190"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORNCDNo2" sboTerm="SBO:0000176" id="R_ORNCDNo2" name="ornithine_cyclodeaminase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ORNCD" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EM3" stoichiometry="3.0082e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4431"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORNDCNo1" sboTerm="SBO:0000176" id="R_ORNDCNo1" name="Ornithine_Decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PI6" stoichiometry="2.8432e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0864"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ORNabcpp" sboTerm="SBO:0000176" id="R_arm_ORNabcpp" name="ornithine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ORNabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0280"/> <fbc:geneProductRef fbc:geneProduct="PP_0281"/> <fbc:geneProductRef fbc:geneProduct="PP_0282"/> <fbc:geneProductRef fbc:geneProduct="PP_0283"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORNabcppNo1" sboTerm="SBO:0000176" id="R_ORNabcppNo1" name="ornithine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EH7" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EH9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EI0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ORNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4483"/> <fbc:geneProductRef fbc:geneProduct="PP_4484"/> <fbc:geneProductRef fbc:geneProduct="PP_4485"/> <fbc:geneProductRef fbc:geneProduct="PP_4486"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ORNabcppNo2" sboTerm="SBO:0000176" id="R_ORNabcppNo2" name="ornithine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R51" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R52" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R53" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R54" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ORNabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0280"/> <fbc:geneProductRef fbc:geneProduct="PP_0281"/> <fbc:geneProductRef fbc:geneProduct="PP_0282"/> <fbc:geneProductRef fbc:geneProduct="PP_0283"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OXCOAHDHNo1" sboTerm="SBO:0000176" id="R_OXCOAHDHNo1" name="oxepin_CoA_hydrolase_3_oxo_5_6_dehydrosuberyl_CoA_semialdehyde_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2oxpaccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT3" stoichiometry="7.1225e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oxdhscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3270"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OXDHCOATNo1" sboTerm="SBO:0000176" id="R_OXDHCOATNo1" name="3_oxo_5_6_dehydrosuberyl_CoA_thiolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oxdhscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS3" stoichiometry="3.5613e-05" constant="true"/> <speciesReference species="M_prot_Q88HS0" stoichiometry="3.5613e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_23dhacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3283"/> <fbc:geneProductRef fbc:geneProduct="PP_3280"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OXOADLRNo1" sboTerm="SBO:0000176" id="R_OXOADLRNo1" name="2_Oxoadipatelipoamde_2_oxidoreductase_decarboxylating_and_acceptor_succinylating_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2oxoadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FB0" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_S_gtrdhdlp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OXOAELNo1" sboTerm="SBO:0000176" id="R_OXOAELNo1" name="3_oxoadipate_enol_lactone_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N36" stoichiometry="7.0439e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1380"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_P5CDNo1" sboTerm="SBO:0000176" id="R_P5CDNo1" name="1_pyrroline_5_carboxylate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1pyr5c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D80" stoichiometry="8.2919e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4947"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_P5CR" sboTerm="SBO:0000176" id="R_arm_P5CR" name="pyrroline_5_carboxylate_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_1pyr5c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_P5CR" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5095"/> <fbc:geneProductRef fbc:geneProduct="PP_3778"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_P5CRNo1" sboTerm="SBO:0000176" id="R_P5CRNo1" name="pyrroline_5_carboxylate_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_P5CR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CT5" stoichiometry="6.6613e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5095"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_P5CRNo2" sboTerm="SBO:0000176" id="R_P5CRNo2" name="pyrroline_5_carboxylate_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_P5CR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GE6" stoichiometry="6.6613e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3778"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PACCOAENo1" sboTerm="SBO:0000176" id="R_PACCOAENo1" name="ring_1_2_phenylacetyl_CoA_epoxidase__NADPH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phaccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS5" stoichiometry="1.7147e-05" constant="true"/> <speciesReference species="M_prot_Q88HS6" stoichiometry="1.7147e-05" constant="true"/> <speciesReference species="M_prot_Q88HS7" stoichiometry="1.7147e-05" constant="true"/> <speciesReference species="M_prot_Q88HS8" stoichiometry="1.7147e-05" constant="true"/> <speciesReference species="M_prot_Q88HS9" stoichiometry="1.7147e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rephaccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3274"/> <fbc:geneProductRef fbc:geneProduct="PP_3275"/> <fbc:geneProductRef fbc:geneProduct="PP_3276"/> <fbc:geneProductRef fbc:geneProduct="PP_3277"/> <fbc:geneProductRef fbc:geneProduct="PP_3278"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PACCOALNo1" sboTerm="SBO:0000176" id="R_PACCOALNo1" name="phenylacetate_CoA_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS4" stoichiometry="1.2801e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phaccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3279"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PACtexNo1" sboTerm="SBO:0000176" id="R_PACtexNo1" name="Phenylacetic_acid_transport_via_outer_membrane_porin (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pac_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT2" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3271"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PB2abcppNo1" sboTerm="SBO:0000176" id="R_PB2abcppNo1" name="Lead__Pb2__ABC_transporter__efflux__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CP1" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5139"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PCNo1" sboTerm="SBO:0000176" id="R_PCNo1" name="pyruvate_carboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C36" stoichiometry="1.7693e-05" constant="true"/> <speciesReference species="M_prot_Q88C37" stoichiometry="1.7693e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5347"/> <fbc:geneProductRef fbc:geneProduct="PP_5346"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PC11MNo1" sboTerm="SBO:0000176" id="R_PC11MNo1" name="precorrin_4_C11_methyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HF0" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre5_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3410"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PC20MNo1" sboTerm="SBO:0000176" id="R_PC20MNo1" name="precorrin_2_C20_methyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dscl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DJ8" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre3a_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4827"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PC6YMNo1" sboTerm="SBO:0000176" id="R_PC6YMNo1" name="precorrin_6Y_C5_15_methyltransferase__decarboxylating_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pre6b_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DJ5" stoichiometry="0.0091374" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pre8_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4830"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PC8XMNo1" sboTerm="SBO:0000176" id="R_PC8XMNo1" name="precorrin_8X_methylmutase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pre8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DJ7" stoichiometry="0.19562" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hgbyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4828"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PCADYOXNo1" sboTerm="SBO:0000176" id="R_PCADYOXNo1" name="protocatechuate_3_4_dioxygenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E12" stoichiometry="4.085e-06" constant="true"/> <speciesReference species="M_prot_Q88E13" stoichiometry="4.085e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_CCbuttc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4655"/> <fbc:geneProductRef fbc:geneProduct="PP_4656"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PDE4" sboTerm="SBO:0000176" id="R_arm_PDE4" name="3__5__cyclic_nucleotide_phosphodiesterase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_35cgmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PDE4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1761"/> <fbc:geneProductRef fbc:geneProduct="PP_1144"/> <fbc:geneProductRef fbc:geneProduct="PP_3435"/> <fbc:geneProductRef fbc:geneProduct="PP_0914"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDE4No1" sboTerm="SBO:0000176" id="R_PDE4No1" name="3__5__cyclic_nucleotide_phosphodiesterase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PDE4" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M14" stoichiometry="0.00041459" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1761"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDE4No2" sboTerm="SBO:0000176" id="R_PDE4No2" name="3__5__cyclic_nucleotide_phosphodiesterase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PDE4" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NR1" stoichiometry="0.00041459" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1144"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDE4No3" sboTerm="SBO:0000176" id="R_PDE4No3" name="3__5__cyclic_nucleotide_phosphodiesterase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PDE4" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HC5" stoichiometry="0.00041459" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3435"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDE4No4" sboTerm="SBO:0000176" id="R_PDE4No4" name="3__5__cyclic_nucleotide_phosphodiesterase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PDE4" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PD6" stoichiometry="0.00041459" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PDH" sboTerm="SBO:0000176" id="R_arm_PDH" name="pyruvate_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PDH" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0339"/> <fbc:geneProductRef fbc:geneProduct="PP_0338"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0339"/> <fbc:geneProductRef fbc:geneProduct="PP_0338"/> <fbc:geneProductRef fbc:geneProduct="PP_5366"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHNo1" sboTerm="SBO:0000176" id="R_PDHNo1" name="pyruvate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FB1" stoichiometry="0.0055556" constant="true"/> <speciesReference species="M_pmet_PDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ5" stoichiometry="0.0055556" constant="true"/> <speciesReference species="M_prot_Q88QZ6" stoichiometry="0.0055556" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0339"/> <fbc:geneProductRef fbc:geneProduct="PP_0338"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHNo2" sboTerm="SBO:0000176" id="R_PDHNo2" name="pyruvate_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PDH" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ5" stoichiometry="0.0055556" constant="true"/> <speciesReference species="M_prot_Q88QZ6" stoichiometry="0.0055556" constant="true"/> <speciesReference species="M_prot_Q88C17" stoichiometry="0.0055556" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0339"/> <fbc:geneProductRef fbc:geneProduct="PP_0338"/> <fbc:geneProductRef fbc:geneProduct="PP_5366"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHaNo1" sboTerm="SBO:0000176" id="R_PDHaNo1" name="pyruvate_dehydrogenase__lipoamide_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ5" stoichiometry="0.0055556" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0339"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHbrNo1" sboTerm="SBO:0000176" id="R_PDHbrNo1" name="pyruvate_dehydrogenase__dihydrolipoamide__reversible (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ6" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0338"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PDHcr" sboTerm="SBO:0000176" id="R_arm_PDHcr" name="Pyruvate_dehydrogenase__dihydrolipoamide_dehydrogenase__reversible (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PDHcr" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5366"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHcrNo1" sboTerm="SBO:0000176" id="R_PDHcrNo1" name="Pyruvate_dehydrogenase__dihydrolipoamide_dehydrogenase__reversible (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C17" stoichiometry="3.0899e-07" constant="true"/> <speciesReference species="M_pmet_PDHcr" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5366"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHcrNo2" sboTerm="SBO:0000176" id="R_PDHcrNo2" name="Pyruvate_dehydrogenase__dihydrolipoamide_dehydrogenase__reversible (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FB1" stoichiometry="3.0899e-07" constant="true"/> <speciesReference species="M_pmet_PDHcr" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PEAMNO2ppNo1" sboTerm="SBO:0000176" id="R_PEAMNO2ppNo1" name="Phenethylamine_pqq__oxidoreductase__deaminating_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H99" stoichiometry="1.0684e-05" constant="true"/> <speciesReference species="M_prot_Q88HA1" stoichiometry="1.0684e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pacald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3461"/> <fbc:geneProductRef fbc:geneProduct="PP_3459"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PEAOpp" sboTerm="SBO:0000176" id="R_arm_PEAOpp" name="PhenylethylalcoholPQQ_oxidoreductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pea_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PEAOpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2674"/> <fbc:geneProductRef fbc:geneProduct="PP_2679"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PEAOppNo1" sboTerm="SBO:0000176" id="R_PEAOppNo1" name="PhenylethylalcoholPQQ_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JH5" stoichiometry="3.0637e-06" constant="true"/> <speciesReference species="M_pmet_PEAOpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pacald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2674"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PEAOppNo2" sboTerm="SBO:0000176" id="R_PEAOppNo2" name="PhenylethylalcoholPQQ_oxidoreductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JH0" stoichiometry="3.0637e-06" constant="true"/> <speciesReference species="M_pmet_PEAOpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pacald_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2679"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PENTSOtexNo1" sboTerm="SBO:0000176" id="R_PENTSOtexNo1" name="pentasulfonate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pentso3_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pentso3_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGCDNo1" sboTerm="SBO:0000176" id="R_PGCDNo1" name="phosphoglycerate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3pg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CM5" stoichiometry="7.215e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3php_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5155"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGLNo1" sboTerm="SBO:0000176" id="R_PGLNo1" name="6_phosphogluconolactonase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6pgl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P30" stoichiometry="8.2268e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1023"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGLCNDHNo1" sboTerm="SBO:0000176" id="R_PGLCNDHNo1" name="phosphogluconate_2_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6p2dhglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HI1" stoichiometry="3.7896e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PGMT" sboTerm="SBO:0000176" id="R_arm_PGMT" name="phosphoglucomutase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PGMT" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> <fbc:geneProductRef fbc:geneProduct="PP_5288"/> <fbc:geneProductRef fbc:geneProduct="PP_3578"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGMTNo1" sboTerm="SBO:0000176" id="R_PGMTNo1" name="phosphoglucomutase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PGMT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ9" stoichiometry="3.5476e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGMTNo2" sboTerm="SBO:0000176" id="R_PGMTNo2" name="phosphoglucomutase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PGMT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GY7" stoichiometry="2.924e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3578"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP120No1" sboTerm="SBO:0000176" id="R_PGPP120No1" name="phosphatidylglycerol_phosphate_phosphatase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp120_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg120_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP120ppNo1" sboTerm="SBO:0000176" id="R_PGPP120ppNo1" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP140No1" sboTerm="SBO:0000176" id="R_PGPP140No1" name="phosphatidylglycerol_phosphate_phosphatase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp140_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg140_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP140ppNo1" sboTerm="SBO:0000176" id="R_PGPP140ppNo1" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP141No1" sboTerm="SBO:0000176" id="R_PGPP141No1" name="phosphatidylglycerol_phosphate_phosphatase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp141_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg141_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP141ppNo1" sboTerm="SBO:0000176" id="R_PGPP141ppNo1" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP160No1" sboTerm="SBO:0000176" id="R_PGPP160No1" name="phosphatidylglycerol_phosphate_phosphatase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg160_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP160ppNo1" sboTerm="SBO:0000176" id="R_PGPP160ppNo1" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP161No1" sboTerm="SBO:0000176" id="R_PGPP161No1" name="phosphatidylglycerol_phosphate_phosphatase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp161_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg161_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP161ppNo1" sboTerm="SBO:0000176" id="R_PGPP161ppNo1" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP180No1" sboTerm="SBO:0000176" id="R_PGPP180No1" name="phosphatidylglycerol_phosphate_phosphatase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp180_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg180_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP180ppNo1" sboTerm="SBO:0000176" id="R_PGPP180ppNo1" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP181No1" sboTerm="SBO:0000176" id="R_PGPP181No1" name="phosphatidylglycerol_phosphate_phosphatase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg181_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGPP181ppNo1" sboTerm="SBO:0000176" id="R_PGPP181ppNo1" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0520"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGSA120No1" sboTerm="SBO:0000176" id="R_PGSA120No1" name="Phosphatidylglycerol_synthase__n_C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdddecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FJ8" stoichiometry="3.7879e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGSA140No1" sboTerm="SBO:0000176" id="R_PGSA140No1" name="Phosphatidylglycerol_synthase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdtdecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FJ8" stoichiometry="3.7879e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGSA141No1" sboTerm="SBO:0000176" id="R_PGSA141No1" name="Phosphatidylglycerol_synthase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdtdec7eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FJ8" stoichiometry="3.7879e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGSA160No1" sboTerm="SBO:0000176" id="R_PGSA160No1" name="Phosphatidylglycerol_synthase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdhdecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FJ8" stoichiometry="3.7879e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGSA161No1" sboTerm="SBO:0000176" id="R_PGSA161No1" name="Phosphatidylglycerol_synthase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdhdec9eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FJ8" stoichiometry="3.7879e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGSA180No1" sboTerm="SBO:0000176" id="R_PGSA180No1" name="Phosphatidylglycerol_synthase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdodecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FJ8" stoichiometry="3.7879e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGSA181No1" sboTerm="SBO:0000176" id="R_PGSA181No1" name="Phosphatidylglycerol_synthase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdodec11eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FJ8" stoichiometry="3.7879e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pgp181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4097"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC100No1" sboTerm="SBO:0000176" id="R_PHADPC100No1" name="Poly_3_hydroxyalkanoate_depolymerase__C100_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C100aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hdcaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC101No1" sboTerm="SBO:0000176" id="R_PHADPC101No1" name="Poly_3_hydroxyalkanoate_depolymerase__C101_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C101PAH_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R3hdec4e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC120No1" sboTerm="SBO:0000176" id="R_PHADPC120No1" name="Poly_3_hydroxyalkanoate_depolymerase__C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C120aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hdda_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC121No1" sboTerm="SBO:0000176" id="R_PHADPC121No1" name="Poly_3_hydroxyalkanoate_depolymerase__C121_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C121aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hdd5ea_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC121d6No1" sboTerm="SBO:0000176" id="R_PHADPC121d6No1" name="Poly_3_hydroxyalkanoate_depolymerase__C121d6_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C121d6PHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hdd6e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC140No1" sboTerm="SBO:0000176" id="R_PHADPC140No1" name="Poly_3_hydroxyalkanoate_depolymerase__C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C140aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3httdca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC141No1" sboTerm="SBO:0000176" id="R_PHADPC141No1" name="Poly_3_hydroxyalkanoate_depolymerase__C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C141aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hcmrs7e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC141d5No1" sboTerm="SBO:0000176" id="R_PHADPC141d5No1" name="Poly_3_hydroxyalkanoate_depolymerase__C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C141d5PHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3htd5e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC142No1" sboTerm="SBO:0000176" id="R_PHADPC142No1" name="Poly_3_hydroxyalkanoate_depolymerase__C142_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C142PHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3htd58e_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC40No1" sboTerm="SBO:0000176" id="R_PHADPC40No1" name="Poly_3_hydroxyalkanoate_depolymerase__C40_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C40aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC50No1" sboTerm="SBO:0000176" id="R_PHADPC50No1" name="Poly_3_hydroxyalkanoate_depolymerase__C50_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C50aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC60No1" sboTerm="SBO:0000176" id="R_PHADPC60No1" name="Poly_3_hydroxyalkanoate_depolymerase__C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C60aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hhxa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC70No1" sboTerm="SBO:0000176" id="R_PHADPC70No1" name="Poly_3_hydroxyalkanoate_depolymerase__C70_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C70aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hhpa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC80No1" sboTerm="SBO:0000176" id="R_PHADPC80No1" name="Poly_3_hydroxyalkanoate_depolymerase__C80_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C80aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hocta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPC90No1" sboTerm="SBO:0000176" id="R_PHADPC90No1" name="Poly_3_hydroxyalkanoate_depolymerase__C90_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C90aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hnonaa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCP100No1" sboTerm="SBO:0000176" id="R_PHADPCP100No1" name="Poly_3_hydroxyalkanoate_depolymerase__Phenyl_C100_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C100pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpdeca_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCP40No1" sboTerm="SBO:0000176" id="R_PHADPCP40No1" name="Poly_3_hydroxyalkanoate_depolymerase__Phenyl_C40_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C40pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCP50No1" sboTerm="SBO:0000176" id="R_PHADPCP50No1" name="Poly_3_hydroxyalkanoate_depolymerase__Phenyl_C50_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C50pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hppta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCP60No1" sboTerm="SBO:0000176" id="R_PHADPCP60No1" name="Poly_3_hydroxyalkanoate_depolymerase__Phenyl_C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C60pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hphxa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCP70No1" sboTerm="SBO:0000176" id="R_PHADPCP70No1" name="Poly_3_hydroxyalkanoate_depolymerase__Phenyl_C70_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C70pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hphpa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCP80No1" sboTerm="SBO:0000176" id="R_PHADPCP80No1" name="Poly_3_hydroxyalkanoate_depolymerase__Phenyl_C80_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C80pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpocta_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCP90No1" sboTerm="SBO:0000176" id="R_PHADPCP90No1" name="Poly_3_hydroxyalkanoate_depolymerase__Phenyl_C90_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C90pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpnona_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCT40No1" sboTerm="SBO:0000176" id="R_PHADPCT40No1" name="Poly_3_hydroxyalkanoate_depolymerase__Acetylthio_C40_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C40atPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3h4atba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHADPCT60No1" sboTerm="SBO:0000176" id="R_PHADPCT60No1" name="Poly_3_hydroxyalkanoate_depolymerase__Acetylthio_C60_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_C60atPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D24" stoichiometry="7.9026e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3h6atha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5004"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAP2C100" sboTerm="SBO:0000176" id="R_arm_PHAP2C100" name="Poly__3_hydroxyalkanoate__polymerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAP2C100" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C100No1" sboTerm="SBO:0000176" id="R_PHAP2C100No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PHAP2C100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C100aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C100No2" sboTerm="SBO:0000176" id="R_PHAP2C100No2" name="Poly__3_hydroxyalkanoate__polymerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PHAP2C100" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C100aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAP2C101" sboTerm="SBO:0000176" id="R_arm_PHAP2C101" name="Poly__3_hydroxyalkanoate__polymerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAP2C101" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C101No1" sboTerm="SBO:0000176" id="R_PHAP2C101No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAP2C101" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C101PAH_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C101No2" sboTerm="SBO:0000176" id="R_PHAP2C101No2" name="Poly__3_hydroxyalkanoate__polymerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAP2C101" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C101PAH_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C120No1" sboTerm="SBO:0000176" id="R_PHAP2C120No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C120aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C121No1" sboTerm="SBO:0000176" id="R_PHAP2C121No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C121aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C121d6No1" sboTerm="SBO:0000176" id="R_PHAP2C121d6No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C121d6PHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C140No1" sboTerm="SBO:0000176" id="R_PHAP2C140No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C140aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C141No1" sboTerm="SBO:0000176" id="R_PHAP2C141No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C141aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C141d5No1" sboTerm="SBO:0000176" id="R_PHAP2C141d5No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C141d5PHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C142No1" sboTerm="SBO:0000176" id="R_PHAP2C142No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C142PHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAP2C60" sboTerm="SBO:0000176" id="R_arm_PHAP2C60" name="Poly__3_hydroxyalkanoate__polymerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAP2C60" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C60No1" sboTerm="SBO:0000176" id="R_PHAP2C60No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAP2C60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C60aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C60No2" sboTerm="SBO:0000176" id="R_PHAP2C60No2" name="Poly__3_hydroxyalkanoate__polymerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAP2C60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C60aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAP2C80" sboTerm="SBO:0000176" id="R_arm_PHAP2C80" name="Poly__3_hydroxyalkanoate__polymerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAP2C80" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C80No1" sboTerm="SBO:0000176" id="R_PHAP2C80No1" name="Poly__3_hydroxyalkanoate__polymerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAP2C80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C80aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAP2C80No2" sboTerm="SBO:0000176" id="R_PHAP2C80No2" name="Poly__3_hydroxyalkanoate__polymerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAP2C80" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C80aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAPC40" sboTerm="SBO:0000176" id="R_arm_PHAPC40" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxybutanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hbcoa__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAPC40" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC40No1" sboTerm="SBO:0000176" id="R_PHAPC40No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxybutanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C40aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC40No2" sboTerm="SBO:0000176" id="R_PHAPC40No2" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxybutanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C40aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAPC50" sboTerm="SBO:0000176" id="R_arm_PHAPC50" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxypentanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAPC50" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC50No1" sboTerm="SBO:0000176" id="R_PHAPC50No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxypentanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C50aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC50No2" sboTerm="SBO:0000176" id="R_PHAPC50No2" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxypentanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C50aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAPC70" sboTerm="SBO:0000176" id="R_arm_PHAPC70" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyheptanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAPC70" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC70No1" sboTerm="SBO:0000176" id="R_PHAPC70No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyheptanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC70" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C70aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC70No2" sboTerm="SBO:0000176" id="R_PHAPC70No2" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyheptanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC70" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C70aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAPC90" sboTerm="SBO:0000176" id="R_arm_PHAPC90" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxynonanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAPC90" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC90No1" sboTerm="SBO:0000176" id="R_PHAPC90No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxynonanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC90" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C90aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPC90No2" sboTerm="SBO:0000176" id="R_PHAPC90No2" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxynonanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPC90" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C90aPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP100No1" sboTerm="SBO:0000176" id="R_PHAPCP100No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenyldecanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C100pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP40No1" sboTerm="SBO:0000176" id="R_PHAPCP40No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenylbutyryl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C40pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAPCP50" sboTerm="SBO:0000176" id="R_arm_PHAPCP50" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenylpentanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAPCP50" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP50No1" sboTerm="SBO:0000176" id="R_PHAPCP50No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenylpentanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPCP50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C50pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP50No2" sboTerm="SBO:0000176" id="R_PHAPCP50No2" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenylpentanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPCP50" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C50pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP60No1" sboTerm="SBO:0000176" id="R_PHAPCP60No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenylhexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C60pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP70No1" sboTerm="SBO:0000176" id="R_PHAPCP70No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenylheptanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C70pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP80No1" sboTerm="SBO:0000176" id="R_PHAPCP80No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenyloctanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C80pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCP90No1" sboTerm="SBO:0000176" id="R_PHAPCP90No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyphenylnonanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C90pPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAPCT40" sboTerm="SBO:0000176" id="R_arm_PHAPCT40" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyacetylthiobutanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3h4atbcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAPCT40" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCT40No1" sboTerm="SBO:0000176" id="R_PHAPCT40No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyacetylthiobutanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPCT40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C40atPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCT40No2" sboTerm="SBO:0000176" id="R_PHAPCT40No2" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyacetylthiobutanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPCT40" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C40atPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHAPCT60" sboTerm="SBO:0000176" id="R_arm_PHAPCT60" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyacetylthiohexanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_PHAg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHAPCT60" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCT60No1" sboTerm="SBO:0000176" id="R_PHAPCT60No1" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyacetylthiohexanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D25" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPCT60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C60atPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHAPCT60No2" sboTerm="SBO:0000176" id="R_PHAPCT60No2" name="Poly__3_hydroxyalkanoate__polymerase__R_3_Hydroxyacetylthiohexanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88D23" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_PHAPCT60" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_C60atPHA_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5005"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHETA1" sboTerm="SBO:0000176" id="R_arm_PHETA1" name="phenylalanine_transaminase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHETA1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHETA1No1" sboTerm="SBO:0000176" id="R_PHETA1No1" name="phenylalanine_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_PHETA1" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHETA1No2" sboTerm="SBO:0000176" id="R_PHETA1No2" name="phenylalanine_transaminase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_PHETA1" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHETHPTOX3No1" sboTerm="SBO:0000176" id="R_PHETHPTOX3No1" name="L_Phenylalanine_tetrahydrobiopterinoxygen_oxidoreductase__Tetrahydromonapterin_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmnp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EH3" stoichiometry="1.5432e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4490"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI1No1" sboTerm="SBO:0000176" id="R_PLCTI1No1" name="Esterified_fatty_acid_cistrans_isomerase__pe161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pe161e9_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI2No1" sboTerm="SBO:0000176" id="R_PLCTI2No1" name="Esterified_fatty_acid_cistrans_isomerase__pe181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pe181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pe181e11_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI3No1" sboTerm="SBO:0000176" id="R_PLCTI3No1" name="Esterified_fatty_acid_cistrans_isomerase__pg161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg161e9_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI4No1" sboTerm="SBO:0000176" id="R_PLCTI4No1" name="Esterified_fatty_acid_cistrans_isomerase__pg181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg181e11_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI5No1" sboTerm="SBO:0000176" id="R_PLCTI5No1" name="Esterified_fatty_acid_cistrans_isomerase__clpn161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn161e9_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI6No1" sboTerm="SBO:0000176" id="R_PLCTI6No1" name="Esterified_fatty_acid_cistrans_isomerase__clpn181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn181e11_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PMANMNo1" sboTerm="SBO:0000176" id="R_PMANMNo1" name="phosphomannomutase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ9" stoichiometry="3.5476e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PMEACPENo1" sboTerm="SBO:0000176" id="R_PMEACPENo1" name="Pimeloyl_ACP_methyl_ester_esterase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmeACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QX0" stoichiometry="3.268e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pimACP_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0364"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPANo1" sboTerm="SBO:0000176" id="R_PPANo1" name="inorganic_diphosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CG5" stoichiometry="6.065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="2" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_PPA2No1" sboTerm="SBO:0000176" id="R_PPA2No1" name="inorganic_triphosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CG5" stoichiometry="6.065e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PPBNGS" sboTerm="SBO:0000176" id="R_arm_PPBNGS" name="porphobilinogen_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5aop_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PPBNGS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3322"/> <fbc:geneProductRef fbc:geneProduct="PP_2913"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPBNGSNo1" sboTerm="SBO:0000176" id="R_PPBNGSNo1" name="porphobilinogen_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PPBNGS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HN1" stoichiometry="1.7253e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppbng_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3322"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPBNGSNo2" sboTerm="SBO:0000176" id="R_PPBNGSNo2" name="porphobilinogen_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PPBNGS" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IT6" stoichiometry="1.7253e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppbng_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2913"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPCDCNo1" sboTerm="SBO:0000176" id="R_PPCDCNo1" name="phosphopantothenoylcysteine_decarboxylase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4ppcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C96" stoichiometry="9.5785e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pan4p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5285"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPCSCTNo1" sboTerm="SBO:0000176" id="R_PPCSCTNo1" name="Propanoyl_CoA_succinate_CoA_transferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RH5" stoichiometry="3.9179e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0154"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPGPPDPNo1" sboTerm="SBO:0000176" id="R_PPGPPDPNo1" name="guanosine_3__5__bis_diphosphate__3__diphosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppgpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C81" stoichiometry="2.1872e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5302"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PPHNTA" sboTerm="SBO:0000176" id="R_arm_PPHNTA" name="prephenate_transaminase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_Largn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PPHNTA" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPHNTANo1" sboTerm="SBO:0000176" id="R_PPHNTANo1" name="prephenate_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_PPHNTA" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPHNTANo2" sboTerm="SBO:0000176" id="R_PPHNTANo2" name="prephenate_transaminase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_PPHNTA" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPMNo1" sboTerm="SBO:0000176" id="R_PPMNo1" name="phosphopentomutase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ9" stoichiometry="3.5476e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPNCL2No1" sboTerm="SBO:0000176" id="R_PPNCL2No1" name="phosphopantothenate_cysteine_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4ppan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C96" stoichiometry="9.5785e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4ppcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5285"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPNDNo1" sboTerm="SBO:0000176" id="R_PPNDNo1" name="prephenate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M05" stoichiometry="1.0602e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1770"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPNDHNo1" sboTerm="SBO:0000176" id="R_PPNDHNo1" name="prephenate_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M06" stoichiometry="2.9507e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1769"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPSNo1" sboTerm="SBO:0000176" id="R_PPSNo1" name="phosphoenolpyruvate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L53" stoichiometry="1.7693e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2082"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROD2No1" sboTerm="SBO:0000176" id="R_PROD2No1" name="Proline_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D80" stoichiometry="8.2919e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_1pyr5c_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4947"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PROGLYabcpp" sboTerm="SBO:0000176" id="R_arm_PROGLYabcpp" name="L_Prolinylglycine__Pro_Gly__transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_progly_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PROGLYabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> </fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROGLYabcppNo1" sboTerm="SBO:0000176" id="R_PROGLYabcppNo1" name="L_Prolinylglycine__Pro_Gly__transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG8" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_PROGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_progly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0882"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROGLYabcppNo2" sboTerm="SBO:0000176" id="R_PROGLYabcppNo2" name="L_Prolinylglycine__Pro_Gly__transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG6" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_PROGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_progly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0884"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROGLYabcppNo3" sboTerm="SBO:0000176" id="R_PROGLYabcppNo3" name="L_Prolinylglycine__Pro_Gly__transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PG5" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PG9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88PH2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_PROGLYabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_progly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0885"/> <fbc:geneProductRef fbc:geneProduct="PP_0881"/> <fbc:geneProductRef fbc:geneProduct="PP_0880"/> <fbc:geneProductRef fbc:geneProduct="PP_0879"/> <fbc:geneProductRef fbc:geneProduct="PP_0878"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROGLYtexNo1" sboTerm="SBO:0000176" id="R_PROGLYtexNo1" name="L_Prolinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_progly_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_progly_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROtexNo1" sboTerm="SBO:0000176" id="R_PROtexNo1" name="L_proline_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pro__L_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CD1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5250"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSCVTNo1" sboTerm="SBO:0000176" id="R_PSCVTNo1" name="3_phosphoshikimate_1_carboxyvinyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M05" stoichiometry="1.0602e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3psme_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1770"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSP_LNo1" sboTerm="SBO:0000176" id="R_PSP_LNo1" name="phosphoserine_phosphatase__L_serine_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pser__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DB8" stoichiometry="3.4549e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4909"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PSSA120" sboTerm="SBO:0000176" id="R_arm_PSSA120" name="Phosphatidylserine_syntase__n_C120_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdddecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PSSA120" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA120No1" sboTerm="SBO:0000176" id="R_PSSA120No1" name="Phosphatidylserine_syntase__n_C120_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PSSA120" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DZ1" stoichiometry="8.547e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA120No2" sboTerm="SBO:0000176" id="R_PSSA120No2" name="Phosphatidylserine_syntase__n_C120_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PSSA120" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GQ4" stoichiometry="8.547e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps120_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PSSA140" sboTerm="SBO:0000176" id="R_arm_PSSA140" name="Phosphatidylserine_syntase__n_C140_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdtdecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PSSA140" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA140No1" sboTerm="SBO:0000176" id="R_PSSA140No1" name="Phosphatidylserine_syntase__n_C140_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GQ4" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA140No2" sboTerm="SBO:0000176" id="R_PSSA140No2" name="Phosphatidylserine_syntase__n_C140_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DZ1" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA140" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps140_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PSSA141" sboTerm="SBO:0000176" id="R_arm_PSSA141" name="Phosphatidylserine_syntase__n_C141_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdtdec7eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PSSA141" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA141No1" sboTerm="SBO:0000176" id="R_PSSA141No1" name="Phosphatidylserine_syntase__n_C141_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GQ4" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA141No2" sboTerm="SBO:0000176" id="R_PSSA141No2" name="Phosphatidylserine_syntase__n_C141_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DZ1" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA141" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps141_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PSSA160" sboTerm="SBO:0000176" id="R_arm_PSSA160" name="Phosphatidylserine_syntase__n_C160_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdhdecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PSSA160" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA160No1" sboTerm="SBO:0000176" id="R_PSSA160No1" name="Phosphatidylserine_syntase__n_C160_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DZ1" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA160No2" sboTerm="SBO:0000176" id="R_PSSA160No2" name="Phosphatidylserine_syntase__n_C160_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GQ4" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA160" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps160_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PSSA161" sboTerm="SBO:0000176" id="R_arm_PSSA161" name="Phosphatidylserine_syntase__n_C161_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdhdec9eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PSSA161" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA161No1" sboTerm="SBO:0000176" id="R_PSSA161No1" name="Phosphatidylserine_syntase__n_C161_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DZ1" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA161No2" sboTerm="SBO:0000176" id="R_PSSA161No2" name="Phosphatidylserine_syntase__n_C161_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GQ4" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA161" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps161_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PSSA180" sboTerm="SBO:0000176" id="R_arm_PSSA180" name="Phosphatidylserine_syntase__n_C180_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdodecg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PSSA180" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA180No1" sboTerm="SBO:0000176" id="R_PSSA180No1" name="Phosphatidylserine_syntase__n_C180_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GQ4" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA180No2" sboTerm="SBO:0000176" id="R_PSSA180No2" name="Phosphatidylserine_syntase__n_C180_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DZ1" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA180" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps180_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PSSA181" sboTerm="SBO:0000176" id="R_arm_PSSA181" name="Phosphatidylserine_syntase__n_C181_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdpdodec11eg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PSSA181" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA181No1" sboTerm="SBO:0000176" id="R_PSSA181No1" name="Phosphatidylserine_syntase__n_C181_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88DZ1" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSSA181No2" sboTerm="SBO:0000176" id="R_PSSA181No2" name="Phosphatidylserine_syntase__n_C181_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GQ4" stoichiometry="8.547e-07" constant="true"/> <speciesReference species="M_pmet_PSSA181" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ps181_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PTRCabcpp" sboTerm="SBO:0000176" id="R_arm_PTRCabcpp" name="putrescine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PTRCabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0411"/> <fbc:geneProductRef fbc:geneProduct="PP_0413"/> <fbc:geneProductRef fbc:geneProduct="PP_0414"/> <fbc:geneProductRef fbc:geneProduct="PP_0412"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5180"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5181"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3147"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5341"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0873"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcppNo1" sboTerm="SBO:0000176" id="R_PTRCabcppNo1" name="putrescine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PTRCabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QS4" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88QS5" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88QS6" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88QS7" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0411"/> <fbc:geneProductRef fbc:geneProduct="PP_0413"/> <fbc:geneProductRef fbc:geneProduct="PP_0414"/> <fbc:geneProductRef fbc:geneProduct="PP_0412"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcppNo2" sboTerm="SBO:0000176" id="R_PTRCabcppNo2" name="putrescine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PTRCabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CK0" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK1" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK2" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK3" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5180"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcppNo3" sboTerm="SBO:0000176" id="R_PTRCabcppNo3" name="putrescine_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PTRCabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CK1" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK2" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK3" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CJ9" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5181"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcppNo4" sboTerm="SBO:0000176" id="R_PTRCabcppNo4" name="putrescine_transport_via_ABC_system__periplasm_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PTRCabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CK1" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK2" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK3" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88I54" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3147"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcppNo5" sboTerm="SBO:0000176" id="R_PTRCabcppNo5" name="putrescine_transport_via_ABC_system__periplasm_ (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PTRCabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CK1" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK2" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK3" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88C42" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5341"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcppNo6" sboTerm="SBO:0000176" id="R_PTRCabcppNo6" name="putrescine_transport_via_ABC_system__periplasm_ (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PTRCabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CK1" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK2" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88CK3" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88PH7" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0873"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> <fbc:geneProductRef fbc:geneProduct="PP_5178"/> <fbc:geneProductRef fbc:geneProduct="PP_5177"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PUTA3No1" sboTerm="SBO:0000176" id="R_PUTA3No1" name="puta3 (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D80" stoichiometry="8.2919e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4947"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PYK" sboTerm="SBO:0000176" id="R_arm_PYK" name="pyruvate_kinase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PYK" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4301"/> <fbc:geneProductRef fbc:geneProduct="PP_1362"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYKNo1" sboTerm="SBO:0000176" id="R_PYKNo1" name="pyruvate_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PYK" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EZ9" stoichiometry="8.6697e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4301"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PYKNo2" sboTerm="SBO:0000176" id="R_PYKNo2" name="pyruvate_kinase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_PYK" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N54" stoichiometry="8.6697e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1362"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QOR1No1" sboTerm="SBO:0000176" id="R_QOR1No1" name="epoxyqueuosine_reductase__trnahis_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnahisqo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DC7" stoichiometry="6.797e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnahisq_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4900"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QOR2No1" sboTerm="SBO:0000176" id="R_QOR2No1" name="epoxyqueuosine_reductase__trnatyr_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnatyrqo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DC7" stoichiometry="6.797e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnatyrq_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4900"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QOR3No1" sboTerm="SBO:0000176" id="R_QOR3No1" name="epoxyqueuosine_reductase__trnaasp_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaaspqo_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DC7" stoichiometry="6.797e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trnaaspq_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4900"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUIDHNo1" sboTerm="SBO:0000176" id="R_QUIDHNo1" name="quinate_dehydrogenase__pyrroloquinoline_quinone_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pqq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GZ6" stoichiometry="9.0188e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pqqh2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3569"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_QUIDHy" sboTerm="SBO:0000176" id="R_arm_QUIDHy" name="quinate_dehydrogenase__NADP_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_QUIDHy" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUIDHyNo1" sboTerm="SBO:0000176" id="R_QUIDHyNo1" name="quinate_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_QUIDHy" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K85" stoichiometry="7.3681e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUIDHyNo2" sboTerm="SBO:0000176" id="R_QUIDHyNo2" name="quinate_dehydrogenase__NADP_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_QUIDHy" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IJ7" stoichiometry="7.3681e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QULNSNo1" sboTerm="SBO:0000176" id="R_QULNSNo1" name="quinolinate_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_iasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NH8" stoichiometry="0.00034722" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quln_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1231"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_R15BPKNo1" sboTerm="SBO:0000176" id="R_R15BPKNo1" name="ribose_1_5_bisphosphokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r15bp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EJ3" stoichiometry="8.5448e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4469"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RBFKNo1" sboTerm="SBO:0000176" id="R_RBFKNo1" name="riboflavin_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ribflv_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q93" stoichiometry="4.085e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0602"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_RBFSa" sboTerm="SBO:0000176" id="R_arm_RBFSa" name="riboflavin_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4r5au_c" stoichiometry="1" constant="true"/> <speciesReference species="M_db4p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_RBFSa" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0515"/> <fbc:geneProductRef fbc:geneProduct="PP_2916"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RBFSaNo1" sboTerm="SBO:0000176" id="R_RBFSaNo1" name="riboflavin_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_RBFSa" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH8" stoichiometry="0.00013889" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmlz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0515"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RBFSaNo2" sboTerm="SBO:0000176" id="R_RBFSaNo2" name="riboflavin_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_RBFSa" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IT3" stoichiometry="0.00013889" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmlz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2916"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RBKNo1" sboTerm="SBO:0000176" id="R_RBKNo1" name="ribokinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K34" stoichiometry="5.81e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2458"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_RDXRr" sboTerm="SBO:0000176" id="R_arm_RDXRr" name="Rubredoxin_oxidoreductase_reversible (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdxo_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_RDXRr" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5371"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5315"/> <fbc:geneProductRef fbc:geneProduct="PP_5314"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RDXRrNo1" sboTerm="SBO:0000176" id="R_RDXRrNo1" name="Rubredoxin_oxidoreductase_reversible (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_RDXRr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C12" stoichiometry="3.299e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdxr_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5371"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RDXRrNo2" sboTerm="SBO:0000176" id="R_RDXRrNo2" name="Rubredoxin_oxidoreductase_reversible (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_RDXRr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C68" stoichiometry="3.299e-05" constant="true"/> <speciesReference species="M_prot_Q88C69" stoichiometry="3.299e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdxr_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5315"/> <fbc:geneProductRef fbc:geneProduct="PP_5314"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_REPHACCOAINo1" sboTerm="SBO:0000176" id="R_REPHACCOAINo1" name="ring_1_2_epoxyphenylacetyl_CoA_isomerase__oxepin_CoA_forming_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_rephaccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS0" stoichiometry="9.9562e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2oxpaccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR100No1" sboTerm="SBO:0000176" id="R_RHACOAR100No1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3odcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR101No1" sboTerm="SBO:0000176" id="R_RHACOAR101No1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3odec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR120No1" sboTerm="SBO:0000176" id="R_RHACOAR120No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR121d5No1" sboTerm="SBO:0000176" id="R_RHACOAR121d5No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oddccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR121d6No1" sboTerm="SBO:0000176" id="R_RHACOAR121d6No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3odd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR140No1" sboTerm="SBO:0000176" id="R_RHACOAR140No1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3otdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR141d5No1" sboTerm="SBO:0000176" id="R_RHACOAR141d5No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3odd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR141d7No1" sboTerm="SBO:0000176" id="R_RHACOAR141d7No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3otdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR142No1" sboTerm="SBO:0000176" id="R_RHACOAR142No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR60No1" sboTerm="SBO:0000176" id="R_RHACOAR60No1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR70No1" sboTerm="SBO:0000176" id="R_RHACOAR70No1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ohpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR80No1" sboTerm="SBO:0000176" id="R_RHACOAR80No1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3oocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR90No1" sboTerm="SBO:0000176" id="R_RHACOAR90No1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ononacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP100No1" sboTerm="SBO:0000176" id="R_RHACOARP100No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3opdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP40No1" sboTerm="SBO:0000176" id="R_RHACOARP40No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3opbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP50No1" sboTerm="SBO:0000176" id="R_RHACOARP50No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3opptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP60No1" sboTerm="SBO:0000176" id="R_RHACOARP60No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ophxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP70No1" sboTerm="SBO:0000176" id="R_RHACOARP70No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3ophpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP80No1" sboTerm="SBO:0000176" id="R_RHACOARP80No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3opoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP90No1" sboTerm="SBO:0000176" id="R_RHACOARP90No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3opnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOART60No1" sboTerm="SBO:0000176" id="R_RHACOART60No1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3o6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RIBabcppNo1" sboTerm="SBO:0000176" id="R_RIBabcppNo1" name="D_ribose_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rib__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K36" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88K37" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88K38" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2455"/> <fbc:geneProductRef fbc:geneProduct="PP_2454"/> <fbc:geneProductRef fbc:geneProduct="PP_2456"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_RNDR1" sboTerm="SBO:0000176" id="R_arm_RNDR1" name="ribonucleoside_diphosphate_reductase__ADP_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_RNDR1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR1No1" sboTerm="SBO:0000176" id="R_RNDR1No1" name="ribonucleoside_diphosphate_reductase__ADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CG6" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR1No2" sboTerm="SBO:0000176" id="R_RNDR1No2" name="ribonucleoside_diphosphate_reductase__ADP_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QI2" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR1No3" sboTerm="SBO:0000176" id="R_RNDR1No3" name="ribonucleoside_diphosphate_reductase__ADP_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CW1" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_RNDR2" sboTerm="SBO:0000176" id="R_arm_RNDR2" name="ribonucleoside_diphosphate_reductase__GDP_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_RNDR2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR2No1" sboTerm="SBO:0000176" id="R_RNDR2No1" name="ribonucleoside_diphosphate_reductase__GDP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CG6" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR2No2" sboTerm="SBO:0000176" id="R_RNDR2No2" name="ribonucleoside_diphosphate_reductase__GDP_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QI2" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR2No3" sboTerm="SBO:0000176" id="R_RNDR2No3" name="ribonucleoside_diphosphate_reductase__GDP_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CW1" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_RNDR3" sboTerm="SBO:0000176" id="R_arm_RNDR3" name="ribonucleoside_diphosphate_reductase__CDP_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_RNDR3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR3No1" sboTerm="SBO:0000176" id="R_RNDR3No1" name="ribonucleoside_diphosphate_reductase__CDP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CG6" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR3No2" sboTerm="SBO:0000176" id="R_RNDR3No2" name="ribonucleoside_diphosphate_reductase__CDP_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QI2" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR3No3" sboTerm="SBO:0000176" id="R_RNDR3No3" name="ribonucleoside_diphosphate_reductase__CDP_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CW1" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_RNDR4" sboTerm="SBO:0000176" id="R_arm_RNDR4" name="ribonucleoside_diphosphate_reductase__UDP_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_RNDR4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR4No1" sboTerm="SBO:0000176" id="R_RNDR4No1" name="ribonucleoside_diphosphate_reductase__UDP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CG6" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR4" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR4No2" sboTerm="SBO:0000176" id="R_RNDR4No2" name="ribonucleoside_diphosphate_reductase__UDP_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QI2" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR4" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RNDR4No3" sboTerm="SBO:0000176" id="R_RNDR4No3" name="ribonucleoside_diphosphate_reductase__UDP_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CW1" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NM8" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_prot_Q88NN0" stoichiometry="2.1533e-05" constant="true"/> <speciesReference species="M_pmet_RNDR4" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dudp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1177"/> <fbc:geneProductRef fbc:geneProduct="PP_1179"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RPENo1" sboTerm="SBO:0000176" id="R_RPENo1" name="ribulose_5_phosphate_3_epimerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QS3" stoichiometry="3.1928e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0415"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RZ5PPNo1" sboTerm="SBO:0000176" id="R_RZ5PPNo1" name="alpha_ribazole_5_phosphate_phosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5prdmbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M94" stoichiometry="3.5162e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdmbzi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1680"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_S7PINo1" sboTerm="SBO:0000176" id="R_S7PINo1" name="sedoheptulose_7_phosphate_isomerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_s7p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N89" stoichiometry="0.00055556" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gmhep7p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1323"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SADTNo1" sboTerm="SBO:0000176" id="R_SADTNo1" name="sulfate_adenylyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NA8" stoichiometry="1.1973e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aps_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1304"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SARCOXNo1" sboTerm="SBO:0000176" id="R_SARCOXNo1" name="sarcosine_oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sarcs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R08" stoichiometry="2.7503e-06" constant="true"/> <speciesReference species="M_prot_Q88R09" stoichiometry="2.7503e-06" constant="true"/> <speciesReference species="M_prot_Q88R10" stoichiometry="2.7503e-06" constant="true"/> <speciesReference species="M_prot_Q88R11" stoichiometry="2.7503e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0323"/> <fbc:geneProductRef fbc:geneProduct="PP_0324"/> <fbc:geneProductRef fbc:geneProduct="PP_0325"/> <fbc:geneProductRef fbc:geneProduct="PP_0326"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SARCOX2No1" sboTerm="SBO:0000176" id="R_SARCOX2No1" name="sarcosine_oxidase__tetrahydrofolate_dependent_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sarcs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R08" stoichiometry="2.7503e-06" constant="true"/> <speciesReference species="M_prot_Q88R09" stoichiometry="2.7503e-06" constant="true"/> <speciesReference species="M_prot_Q88R10" stoichiometry="2.7503e-06" constant="true"/> <speciesReference species="M_prot_Q88R11" stoichiometry="2.7503e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0323"/> <fbc:geneProductRef fbc:geneProduct="PP_0324"/> <fbc:geneProductRef fbc:geneProduct="PP_0325"/> <fbc:geneProductRef fbc:geneProduct="PP_0326"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SDPTANo1" sboTerm="SBO:0000176" id="R_SDPTANo1" name="succinyldiaminopimelate_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sl26da_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MI3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sl2a6o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1588"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELADTNo1" sboTerm="SBO:0000176" id="R_SELADTNo1" name="selenate_adenylyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NA8" stoichiometry="7.716e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adsel_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1304"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SELabcpp" sboTerm="SBO:0000176" id="R_arm_SELabcpp" name="selenatenate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sel_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SELabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_4305"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5168"/> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELabcppNo1" sboTerm="SBO:0000176" id="R_SELabcppNo1" name="selenatenate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_SELabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELabcppNo2" sboTerm="SBO:0000176" id="R_SELabcppNo2" name="selenatenate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_SELabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELabcppNo3" sboTerm="SBO:0000176" id="R_SELabcppNo3" name="selenatenate_transport_via_ABC_system__periplasm_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SELabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CK9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88CL0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88EZ5" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_4305"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SELabcppNo4" sboTerm="SBO:0000176" id="R_SELabcppNo4" name="selenatenate_transport_via_ABC_system__periplasm_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SELabcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CK9" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88CL0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88CL1" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5171"/> <fbc:geneProductRef fbc:geneProduct="PP_5170"/> <fbc:geneProductRef fbc:geneProduct="PP_5169"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SERAT" sboTerm="SBO:0000176" id="R_arm_SERAT" name="serine_O_acetyltransferase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SERAT" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0840"/> <fbc:geneProductRef fbc:geneProduct="PP_0228"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERATNo1" sboTerm="SBO:0000176" id="R_SERATNo1" name="serine_O_acetyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SERAT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PL0" stoichiometry="1.3889e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0840"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERATNo2" sboTerm="SBO:0000176" id="R_SERATNo2" name="serine_O_acetyltransferase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SERAT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RA5" stoichiometry="1.3889e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0228"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SERD_L" sboTerm="SBO:0000176" id="R_arm_SERD_L" name="L_serine_deaminase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SERD_L" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3144"/> <fbc:geneProductRef fbc:geneProduct="PP_0297"/> <fbc:geneProductRef fbc:geneProduct="PP_0987"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERD_LNo1" sboTerm="SBO:0000176" id="R_SERD_LNo1" name="L_serine_deaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SERD_L" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I57" stoichiometry="8.4175e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3144"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERD_LNo2" sboTerm="SBO:0000176" id="R_SERD_LNo2" name="L_serine_deaminase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SERD_L" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R37" stoichiometry="8.4175e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0297"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERD_LNo3" sboTerm="SBO:0000176" id="R_SERD_LNo3" name="L_serine_deaminase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SERD_L" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P66" stoichiometry="8.4175e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0987"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SFGTHiNo1" sboTerm="SBO:0000176" id="R_SFGTHiNo1" name="S_Formylglutathione_hydralase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_Sfglutth_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MF4" stoichiometry="9.7466e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gthrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1617"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SHK3Dr" sboTerm="SBO:0000176" id="R_arm_SHK3Dr" name="shikimate_dehydrogenase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SHK3Dr" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> <fbc:geneProductRef fbc:geneProduct="PP_0074"/> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> <fbc:geneProductRef fbc:geneProduct="PP_3768"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3DrNo1" sboTerm="SBO:0000176" id="R_SHK3DrNo1" name="shikimate_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IJ7" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_SHK3Dr" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3DrNo2" sboTerm="SBO:0000176" id="R_SHK3DrNo2" name="shikimate_dehydrogenase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SHK3Dr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RQ5" stoichiometry="9.0481e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0074"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3DrNo3" sboTerm="SBO:0000176" id="R_SHK3DrNo3" name="shikimate_dehydrogenase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K85" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_SHK3Dr" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3DrNo4" sboTerm="SBO:0000176" id="R_SHK3DrNo4" name="shikimate_dehydrogenase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SHK3Dr" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GF6" stoichiometry="2.01e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3768"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHSL2rNo1" sboTerm="SBO:0000176" id="R_SHSL2rNo1" name="O_succinylhomoserine_lyase__H2S_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/> <speciesReference species="M_suchms_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JW9" stoichiometry="1.2957e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2528"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SPMDabcppNo1" sboTerm="SBO:0000176" id="R_SPMDabcppNo1" name="spermidine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_spmd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QS4" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88QS5" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88QS6" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_prot_Q88QS7" stoichiometry="5.3522e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_spmd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0411"/> <fbc:geneProductRef fbc:geneProduct="PP_0413"/> <fbc:geneProductRef fbc:geneProduct="PP_0414"/> <fbc:geneProductRef fbc:geneProduct="PP_0412"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SPODMNo1" sboTerm="SBO:0000176" id="R_SPODMNo1" name="superoxide_dismutase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_o2s_c" stoichiometry="2" constant="true"/> <speciesReference species="M_prot_Q88PA4" stoichiometry="6.3131e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0946"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SSALxNo1" sboTerm="SBO:0000176" id="R_SSALxNo1" name="succinate_semialdehyde_dehydrogenase__NAD_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucsal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I50" stoichiometry="5.4253e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3151"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SSALy" sboTerm="SBO:0000176" id="R_arm_SSALy" name="succinate_semialdehyde_dehydrogenase__NADP_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sucsal_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SSALy" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0213"/> <fbc:geneProductRef fbc:geneProduct="PP_2488"/> <fbc:geneProductRef fbc:geneProduct="PP_3151"/> <fbc:geneProductRef fbc:geneProduct="PP_4422"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SSALyNo1" sboTerm="SBO:0000176" id="R_SSALyNo1" name="succinate_semialdehyde_dehydrogenase__NADP_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_SSALy" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K05" stoichiometry="5.4253e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2488"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SSALyNo2" sboTerm="SBO:0000176" id="R_SSALyNo2" name="succinate_semialdehyde_dehydrogenase__NADP_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88I50" stoichiometry="5.4253e-06" constant="true"/> <speciesReference species="M_pmet_SSALy" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3151"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SSALyNo3" sboTerm="SBO:0000176" id="R_SSALyNo3" name="succinate_semialdehyde_dehydrogenase__NADP_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EN2" stoichiometry="3.858e-05" constant="true"/> <speciesReference species="M_pmet_SSALy" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4422"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SUCD4No1" sboTerm="SBO:0000176" id="R_SUCD4No1" name="succinate_dehyrdogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F95" stoichiometry="3.4722e-05" constant="true"/> <speciesReference species="M_prot_Q88F96" stoichiometry="3.4722e-05" constant="true"/> <speciesReference species="M_prot_Q88F97" stoichiometry="3.4722e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4201"/> <fbc:geneProductRef fbc:geneProduct="PP_4202"/> <fbc:geneProductRef fbc:geneProduct="PP_4203"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SUCDiNo1" sboTerm="SBO:0000176" id="R_SUCDiNo1" name="succinate_dehydrogenase__irreversible_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FA5" stoichiometry="1.0684e-06" constant="true"/> <speciesReference species="M_prot_Q88FA6" stoichiometry="1.0684e-06" constant="true"/> <speciesReference species="M_prot_Q88FA7" stoichiometry="1.0684e-06" constant="true"/> <speciesReference species="M_prot_Q88FA8" stoichiometry="1.0684e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4190"/> <fbc:geneProductRef fbc:geneProduct="PP_4191"/> <fbc:geneProductRef fbc:geneProduct="PP_4192"/> <fbc:geneProductRef fbc:geneProduct="PP_4193"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SUCOASNo1" sboTerm="SBO:0000176" id="R_SUCOASNo1" name="succinyl_CoA_synthetase__ADP_forming_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FB3" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4185"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SULFACabcpp" sboTerm="SBO:0000176" id="R_arm_SULFACabcpp" name="sulfoacetate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sulfac_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SULFACabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SULFACabcppNo1" sboTerm="SBO:0000176" id="R_SULFACabcppNo1" name="sulfoacetate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_SULFACabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sulfac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SULFACabcppNo2" sboTerm="SBO:0000176" id="R_SULFACabcppNo2" name="sulfoacetate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_SULFACabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sulfac_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SULFACtexNo1" sboTerm="SBO:0000176" id="R_SULFACtexNo1" name="sulfoaceate_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_sulfac_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_sulfac_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TAURabcpp" sboTerm="SBO:0000176" id="R_arm_TAURabcpp" name="taurine_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_taur_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TAURabcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAURabcppNo1" sboTerm="SBO:0000176" id="R_TAURabcppNo1" name="taurine_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_TAURabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_taur_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAURabcppNo2" sboTerm="SBO:0000176" id="R_TAURabcppNo2" name="taurine_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_TAURabcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_taur_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAURtexNo1" sboTerm="SBO:0000176" id="R_TAURtexNo1" name="taurine_transport_via_diffusion__extracellular_to_periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_taur_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_taur_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TDPDRE" sboTerm="SBO:0000176" id="R_arm_TDPDRE" name="dTDP_4_dehydrorhamnose_3_5_epimerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dtdp4d6dg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TDPDRE" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0265"/> <fbc:geneProductRef fbc:geneProduct="PP_1782"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDPDRENo1" sboTerm="SBO:0000176" id="R_TDPDRENo1" name="dTDP_4_dehydrorhamnose_3_5_epimerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TDPDRE" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R69" stoichiometry="7.1225e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dtdp4d6dm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0265"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDPDRENo2" sboTerm="SBO:0000176" id="R_TDPDRENo2" name="dTDP_4_dehydrorhamnose_3_5_epimerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TDPDRE" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ4" stoichiometry="7.1225e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dtdp4d6dm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1782"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TDPDRR" sboTerm="SBO:0000176" id="R_arm_TDPDRR" name="dTDP_4_dehydrorhamnose_reductase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dtdp4d6dm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TDPDRR" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1784"/> <fbc:geneProductRef fbc:geneProduct="PP_0500"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDPDRRNo1" sboTerm="SBO:0000176" id="R_TDPDRRNo1" name="dTDP_4_dehydrorhamnose_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TDPDRR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ2" stoichiometry="9.5785e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dtdprmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1784"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDPDRRNo2" sboTerm="SBO:0000176" id="R_TDPDRRNo2" name="dTDP_4_dehydrorhamnose_reductase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TDPDRR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QJ2" stoichiometry="9.5785e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dtdprmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0500"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDPGDHNo1" sboTerm="SBO:0000176" id="R_TDPGDHNo1" name="dTDPglucose_4_6_dehydratase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dtdpglu_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ1" stoichiometry="5.6689e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dtdp4d6dg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1785"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TDSR1" sboTerm="SBO:0000176" id="R_arm_TDSR1" name="thioldisulfide_reductase__DsbC_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dsbcox_p" stoichiometry="1" constant="true"/> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TDSR1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1469"/> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1469"/> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDSR1No1" sboTerm="SBO:0000176" id="R_TDSR1No1" name="thioldisulfide_reductase__DsbC_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QD3" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_pmet_TDSR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MU9" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbcrd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_dsbdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1469"/> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDSR1No2" sboTerm="SBO:0000176" id="R_TDSR1No2" name="thioldisulfide_reductase__DsbC_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88F64" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_pmet_TDSR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MU9" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbcrd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_dsbdox_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1469"/> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TDSR2" sboTerm="SBO:0000176" id="R_arm_TDSR2" name="thioldisulfide_reductase__DsbG_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dsbdrd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dsbgox_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TDSR2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_4237"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_4237"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDSR2No1" sboTerm="SBO:0000176" id="R_TDSR2No1" name="thioldisulfide_reductase__DsbG_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88F64" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_pmet_TDSR2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F62" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dsbgrd_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4235"/> <fbc:geneProductRef fbc:geneProduct="PP_4237"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TDSR2No2" sboTerm="SBO:0000176" id="R_TDSR2No2" name="thioldisulfide_reductase__DsbG_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QD3" stoichiometry="7.716e-05" constant="true"/> <speciesReference species="M_pmet_TDSR2" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F62" stoichiometry="7.716e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dsbdox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dsbgrd_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0561"/> <fbc:geneProductRef fbc:geneProduct="PP_4237"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THD2ppNo1" sboTerm="SBO:0000176" id="R_THD2ppNo1" name="NAD(P) transhydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_p" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FVX4" stoichiometry="3.4e-06" constant="true"/> <speciesReference species="M_prot_Q88RH4" stoichiometry="3.4e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0155"/> <fbc:geneProductRef fbc:geneProduct="PP_0156"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRA2rNo1" sboTerm="SBO:0000176" id="R_THRA2rNo1" name="L_allo_Threonine_Aldolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_athr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R13" stoichiometry="7.8247e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0321"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRArNo1" sboTerm="SBO:0000176" id="R_THRArNo1" name="Threonine_Aldolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R13" stoichiometry="7.8247e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0321"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_THRS" sboTerm="SBO:0000176" id="R_arm_THRS" name="threonine_synthase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phom_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_THRS" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1471"/> <fbc:geneProductRef fbc:geneProduct="PP_0662"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRSNo1" sboTerm="SBO:0000176" id="R_THRSNo1" name="threonine_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MU7" stoichiometry="3.7896e-05" constant="true"/> <speciesReference species="M_pmet_THRS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1471"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRSNo2" sboTerm="SBO:0000176" id="R_THRSNo2" name="threonine_synthase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88Q36" stoichiometry="3.7896e-05" constant="true"/> <speciesReference species="M_pmet_THRS" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0662"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THZPSNNo1" sboTerm="SBO:0000176" id="R_THZPSNNo1" name="thiazole_phosphate_synthesis (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dxyl5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K56" stoichiometry="0.0027778" constant="true"/> <speciesReference species="M_prot_Q88CS5" stoichiometry="0.0027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/> <speciesReference species="M_4mpetz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_2435"/> <fbc:geneProductRef fbc:geneProduct="PP_5105"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TKT1No1" sboTerm="SBO:0000176" id="R_TKT1No1" name="transketolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D62" stoichiometry="2.2806e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_s7p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4965"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TKT2No1" sboTerm="SBO:0000176" id="R_TKT2No1" name="transketolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D62" stoichiometry="2.2806e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4965"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TMPKNo1" sboTerm="SBO:0000176" id="R_TMPKNo1" name="thiamine_phosphate_kinase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmmp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QH4" stoichiometry="0.0044092" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thmpp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0519"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TNTR1" sboTerm="SBO:0000176" id="R_arm_TNTR1" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/> <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1254"/> <fbc:geneProductRef fbc:geneProduct="PP_0920"/> <fbc:geneProductRef fbc:geneProduct="PP_2486"/> <fbc:geneProductRef fbc:geneProduct="PP_1478"/> <fbc:geneProductRef fbc:geneProduct="PP_3173"/> <fbc:geneProductRef fbc:geneProduct="PP_2489"/> <fbc:geneProductRef fbc:geneProduct="PP_2490"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1No1" sboTerm="SBO:0000176" id="R_TNTR1No1" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NF7" stoichiometry="2.3823e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1254"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1No2" sboTerm="SBO:0000176" id="R_TNTR1No2" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PD0" stoichiometry="2.3823e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0920"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1No3" sboTerm="SBO:0000176" id="R_TNTR1No3" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K07" stoichiometry="2.3823e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2486"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1No4" sboTerm="SBO:0000176" id="R_TNTR1No4" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MU0" stoichiometry="2.3823e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1478"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1No5" sboTerm="SBO:0000176" id="R_TNTR1No5" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I29" stoichiometry="2.01e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1No6" sboTerm="SBO:0000176" id="R_TNTR1No6" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K04" stoichiometry="2.3823e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2489"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1No7" sboTerm="SBO:0000176" id="R_TNTR1No7" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No7)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_TNTR1" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K03" stoichiometry="2.3823e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2490"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TNTR1x" sboTerm="SBO:0000176" id="R_arm_TNTR1x" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="2" constant="true"/> <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TNTR1x" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2486"/> <fbc:geneProductRef fbc:geneProduct="PP_2432"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1xNo1" sboTerm="SBO:0000176" id="R_TNTR1xNo1" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K07" stoichiometry="1.3889e-05" constant="true"/> <speciesReference species="M_pmet_TNTR1x" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2486"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR1xNo2" sboTerm="SBO:0000176" id="R_TNTR1xNo2" name="TNT_nitroreductase_4_Hydroxylamino_2_6_dinitrotoluene_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K59" stoichiometry="1.3889e-05" constant="true"/> <speciesReference species="M_pmet_TNTR1x" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2432"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TNTR2" sboTerm="SBO:0000176" id="R_arm_TNTR2" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/> <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TNTR2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1254"/> <fbc:geneProductRef fbc:geneProduct="PP_0920"/> <fbc:geneProductRef fbc:geneProduct="PP_2486"/> <fbc:geneProductRef fbc:geneProduct="PP_1478"/> <fbc:geneProductRef fbc:geneProduct="PP_3173"/> <fbc:geneProductRef fbc:geneProduct="PP_2489"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR2No1" sboTerm="SBO:0000176" id="R_TNTR2No1" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88NF7" stoichiometry="2.3823e-05" constant="true"/> <speciesReference species="M_pmet_TNTR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1254"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR2No2" sboTerm="SBO:0000176" id="R_TNTR2No2" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PD0" stoichiometry="2.3823e-05" constant="true"/> <speciesReference species="M_pmet_TNTR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0920"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR2No3" sboTerm="SBO:0000176" id="R_TNTR2No3" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K07" stoichiometry="2.3823e-05" constant="true"/> <speciesReference species="M_pmet_TNTR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2486"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR2No4" sboTerm="SBO:0000176" id="R_TNTR2No4" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_ (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MU0" stoichiometry="2.3823e-05" constant="true"/> <speciesReference species="M_pmet_TNTR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1478"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR2No5" sboTerm="SBO:0000176" id="R_TNTR2No5" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_ (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88I29" stoichiometry="2.01e-07" constant="true"/> <speciesReference species="M_pmet_TNTR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TNTR2No6" sboTerm="SBO:0000176" id="R_TNTR2No6" name="TNT_nitroreductase_2_Hydroxylamino_4_6_dinitrotoluene_ (No6)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K04" stoichiometry="2.3823e-05" constant="true"/> <speciesReference species="M_pmet_TNTR2" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2489"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TRDR" sboTerm="SBO:0000176" id="R_arm_TRDR" name="thioredoxin_reductase__NADPH_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TRDR" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> <fbc:geneProductRef fbc:geneProduct="PP_0786"/> <fbc:geneProductRef fbc:geneProduct="PP_0786"/> </fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0786"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRDRNo1" sboTerm="SBO:0000176" id="R_TRDRNo1" name="thioredoxin_reductase__NADPH_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CG6" stoichiometry="8.4175e-06" constant="true"/> <speciesReference species="M_pmet_TRDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PR2" stoichiometry="8.4175e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5215"/> <fbc:geneProductRef fbc:geneProduct="PP_0786"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRDRNo2" sboTerm="SBO:0000176" id="R_TRDRNo2" name="thioredoxin_reductase__NADPH_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QI2" stoichiometry="8.4175e-06" constant="true"/> <speciesReference species="M_pmet_TRDR" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0510"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRDRNo3" sboTerm="SBO:0000176" id="R_TRDRNo3" name="thioredoxin_reductase__NADPH_ (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CW1" stoichiometry="8.4175e-06" constant="true"/> <speciesReference species="M_pmet_TRDR" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PR2" stoichiometry="8.4175e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0786"/> <fbc:geneProductRef fbc:geneProduct="PP_5069"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRSARrNo1" sboTerm="SBO:0000176" id="R_TRSARrNo1" name="tartronate_semialdehyde_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2h3oppan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F01" stoichiometry="1.1431e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4299"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TYRTA" sboTerm="SBO:0000176" id="R_arm_TYRTA" name="tyrosine_transaminase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TYRTA" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TYRTANo1" sboTerm="SBO:0000176" id="R_TYRTANo1" name="tyrosine_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_TYRTA" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TYRTANo2" sboTerm="SBO:0000176" id="R_TYRTANo2" name="tyrosine_transaminase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_TYRTA" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAG2ENo1" sboTerm="SBO:0000176" id="R_UAG2ENo1" name="UDP_N_acetylglucosamine_2_epimerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LW6" stoichiometry="3.5162e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_uacmam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1811"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAMASNo1" sboTerm="SBO:0000176" id="R_UAMASNo1" name="UDP_N_acetylmuramoyl_L_alanine_synthetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uamr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE7" stoichiometry="5.7511e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uama_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0547"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAPGRNo1" sboTerm="SBO:0000176" id="R_UAPGRNo1" name="UDP_N_acetylenolpyruvoylglucosamine_reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uaccg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GH8" stoichiometry="5.1251e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uamr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3745"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_UDPG4E" sboTerm="SBO:0000176" id="R_arm_UDPG4E" name="UDPglucose_4_epimerase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_UDPG4E" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3129"/> <fbc:geneProductRef fbc:geneProduct="PP_0551"/> <fbc:geneProductRef fbc:geneProduct="PP_1803"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDPG4ENo1" sboTerm="SBO:0000176" id="R_UDPG4ENo1" name="UDPglucose_4_epimerase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_UDPG4E" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I72" stoichiometry="2.2325e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3129"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDPG4ENo2" sboTerm="SBO:0000176" id="R_UDPG4ENo2" name="UDPglucose_4_epimerase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_UDPG4E" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE3" stoichiometry="2.2325e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0551"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDPG4ENo3" sboTerm="SBO:0000176" id="R_UDPG4ENo3" name="UDPglucose_4_epimerase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_UDPG4E" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LX4" stoichiometry="2.2325e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UGMDDSNo1" sboTerm="SBO:0000176" id="R_UGMDDSNo1" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_alanine_synthetase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ugmd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88N80" stoichiometry="5.0505e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ugmda_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1333"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UM3PLNo1" sboTerm="SBO:0000176" id="R_UM3PLNo1" name="UDP_N_acetylmuramateL_alanyl_gamma_D_glutamyl_meso_diaminopimelate_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_LalaDgluMdap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uamr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE7" stoichiometry="5.7511e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ugmd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0547"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UM4PLNo1" sboTerm="SBO:0000176" id="R_UM4PLNo1" name="UDP_N_acetylmuramateL_alanyl_gamma_D_glutamyl_meso_diaminopimelate_D_alanine_ligase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_LalaDgluMdapDala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uamr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE7" stoichiometry="5.7511e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_um4p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0547"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_UNK3" sboTerm="SBO:0000176" id="R_arm_UNK3" name="2_keto_4_methylthiobutyrate_transamination (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2kmb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_UNK3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UNK3No1" sboTerm="SBO:0000176" id="R_UNK3No1" name="2_keto_4_methylthiobutyrate_transamination (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_UNK3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UNK3No2" sboTerm="SBO:0000176" id="R_UNK3No2" name="2_keto_4_methylthiobutyrate_transamination (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_UNK3" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_UPP3MT" sboTerm="SBO:0000176" id="R_arm_UPP3MT" name="uroporphyrinogen_methyltransferase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/> <speciesReference species="M_uppg3_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_UPP3MT" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2090"/> <fbc:geneProductRef fbc:geneProduct="PP_3999"/> <fbc:geneProductRef fbc:geneProduct="PP_0188"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UPP3MTNo1" sboTerm="SBO:0000176" id="R_UPP3MTNo1" name="uroporphyrinogen_methyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_UPP3MT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L45" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_dscl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2090"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UPP3MTNo2" sboTerm="SBO:0000176" id="R_UPP3MTNo2" name="uroporphyrinogen_methyltransferase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_UPP3MT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RE3" stoichiometry="7.3099e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="2" constant="true"/> <speciesReference species="M_dscl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UPP3SNo1" sboTerm="SBO:0000176" id="R_UPP3SNo1" name="uroporphyrinogen_III_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hmbil_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RE4" stoichiometry="5.5556e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uppg3_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0187"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_UPPN" sboTerm="SBO:0000176" id="R_arm_UPPN" name="b_ureidopropionase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cala_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_UPPN" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0614"/> <fbc:geneProductRef fbc:geneProduct="PP_4034"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UPPNNo1" sboTerm="SBO:0000176" id="R_UPPNNo1" name="b_ureidopropionase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88Q81" stoichiometry="0.19493" constant="true"/> <speciesReference species="M_pmet_UPPN" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0614"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UPPNNo2" sboTerm="SBO:0000176" id="R_UPPNNo2" name="b_ureidopropionase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FQ3" stoichiometry="0.19493" constant="true"/> <speciesReference species="M_pmet_UPPN" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4034"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UPPRTNo1" sboTerm="SBO:0000176" id="R_UPPRTNo1" name="uracil_phosphoribosyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D31" stoichiometry="5.4466e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4997"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URO_cNo1" sboTerm="SBO:0000176" id="R_URO_cNo1" name="uricase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urate_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IA0" stoichiometry="9.2285e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5hiu_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3099"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_URIHNo1" sboTerm="SBO:0000176" id="R_URIHNo1" name="Uridine_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_uri_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K32" stoichiometry="6.0386e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2460"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALTANo1" sboTerm="SBO:0000176" id="R_VALTANo1" name="valine_transaminase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H54" stoichiometry="3.5613e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3511"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_VCOAD" sboTerm="SBO:0000176" id="R_arm_VCOAD" name="acyl_CoA_dehydrogenase__pentanoyl_CoA_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_VCOAD" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VCOADNo1" sboTerm="SBO:0000176" id="R_VCOADNo1" name="acyl_CoA_dehydrogenase__pentanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_VCOAD" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VCOADNo2" sboTerm="SBO:0000176" id="R_VCOADNo2" name="acyl_CoA_dehydrogenase__pentanoyl_CoA_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS3" stoichiometry="3.2527e-06" constant="true"/> <speciesReference species="M_pmet_VCOAD" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VECOAHNo1" sboTerm="SBO:0000176" id="R_VECOAHNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxypentanoyl_CoA_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VNDHNo1" sboTerm="SBO:0000176" id="R_VNDHNo1" name="VanillinNAD_oxidoreductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanln_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HJ9" stoichiometry="0.0042867" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanlt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3357"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VNDH_2No1" sboTerm="SBO:0000176" id="R_VNDH_2No1" name="vanillinNAD_oxidoreductase__4hbald_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4hbald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HJ9" stoichiometry="0.0042867" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4hbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3357"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VNDH_3No1" sboTerm="SBO:0000176" id="R_VNDH_3No1" name="Vanillin_NAD_oxidoreductase__34dhbald_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_34dhbald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HJ9" stoichiometry="0.0042867" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3357"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VNTDMNo1" sboTerm="SBO:0000176" id="R_VNTDMNo1" name="vanillateoxygen_oxidoreductase__demethylating_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vanlt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GI5" stoichiometry="1.7147e-05" constant="true"/> <speciesReference species="M_prot_Q88GI6" stoichiometry="1.7147e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3736"/> <fbc:geneProductRef fbc:geneProduct="PP_3737"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_WCOSNo1" sboTerm="SBO:0000176" id="R_WCOSNo1" name="tungsten_pterin_cofactor_synthase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_mptamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tungs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L14" stoichiometry="0.00011111" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cu2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_wco_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2123"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_XANDNo1" sboTerm="SBO:0000176" id="R_XANDNo1" name="xanthine_dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F20" stoichiometry="2.3148e-06" constant="true"/> <speciesReference species="M_prot_Q88F21" stoichiometry="2.3148e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_urate_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4278"/> <fbc:geneProductRef fbc:geneProduct="PP_4279"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_XTSNHNo1" sboTerm="SBO:0000176" id="R_XTSNHNo1" name="Xanthosine_hydrolase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xtsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K32" stoichiometry="4.4803e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2460"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ZN2abcpp" sboTerm="SBO:0000176" id="R_arm_ZN2abcpp" name="Zinc__Zn2__ABC_transporter__efflux__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ZN2abcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0041"/> <fbc:geneProductRef fbc:geneProduct="PP_5139"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ZN2abcppNo1" sboTerm="SBO:0000176" id="R_ZN2abcppNo1" name="Zinc__Zn2__ABC_transporter__efflux__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pmet_ZN2abcpp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RT8" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0041"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ZN2abcppNo2" sboTerm="SBO:0000176" id="R_ZN2abcppNo2" name="Zinc__Zn2__ABC_transporter__efflux__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88CP1" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_ZN2abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_zn2_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5139"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_pentso3abcpp" sboTerm="SBO:0000176" id="R_arm_pentso3abcpp" name="pentanesulfonate_transport_via_ABC_system__periplasm_ (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pentso3_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_pentso3abcpp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0240"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0232"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_pentso3abcppNo1" sboTerm="SBO:0000176" id="R_pentso3abcppNo1" name="pentanesulfonate_transport_via_ABC_system__periplasm_ (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R94" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88R96" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_pentso3abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pentso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0237"/> <fbc:geneProductRef fbc:geneProduct="PP_0239"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_pentso3abcppNo2" sboTerm="SBO:0000176" id="R_pentso3abcppNo2" name="pentanesulfonate_transport_via_ABC_system__periplasm_ (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA0" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_prot_Q88RA2" stoichiometry="0.05291" constant="true"/> <speciesReference species="M_pmet_pentso3abcpp" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pentso3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0233"/> <fbc:geneProductRef fbc:geneProduct="PP_0231"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAURabcNo1" sboTerm="SBO:0000176" id="R_TAURabcNo1" name="Taurine transport via ABC system (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_taur_e" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RC3" stoichiometry="0.05291" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_taur_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0209"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_AGPOP" sboTerm="SBO:0000176" id="R_arm_AGPOP" name="DGTP:pyruvate 2-O-phosphotransferase, cytosol (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_dgdp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_AGPOP" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1362"/> <fbc:geneProductRef fbc:geneProduct="PP_4301"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPOPNo1" sboTerm="SBO:0000176" id="R_AGPOPNo1" name="DGTP:pyruvate 2-O-phosphotransferase, cytosol (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88N54" stoichiometry="8.6697e-08" constant="true"/> <speciesReference species="M_pmet_AGPOP" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1362"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AGPOPNo2" sboTerm="SBO:0000176" id="R_AGPOPNo2" name="DGTP:pyruvate 2-O-phosphotransferase, cytosol (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88EZ9" stoichiometry="8.6697e-08" constant="true"/> <speciesReference species="M_pmet_AGPOP" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dgtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4301"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GALhNo1" sboTerm="SBO:0000176" id="R_GALhNo1" name="Glutamate---ammonia ligase, (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CY3" stoichiometry="9.2593e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5046"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PTRCabc" sboTerm="SBO:0000176" id="R_arm_PTRCabc" name="Putrescine transport via ABC system (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_e" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PTRCabc" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0411"/> <fbc:geneProductRef fbc:geneProduct="PP_1484"/> <fbc:geneProductRef fbc:geneProduct="PP_1722"/> <fbc:geneProductRef fbc:geneProduct="PP_3817"/> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcNo1" sboTerm="SBO:0000176" id="R_PTRCabcNo1" name="Putrescine transport via ABC system (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88QS7" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_pmet_PTRCabc" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0411"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcNo2" sboTerm="SBO:0000176" id="R_PTRCabcNo2" name="Putrescine transport via ABC system (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_PTRCabc" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MT4" stoichiometry="0.00092593" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1484"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcNo3" sboTerm="SBO:0000176" id="R_PTRCabcNo3" name="Putrescine transport via ABC system (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_PTRCabc" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M52" stoichiometry="0.00092593" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1722"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcNo4" sboTerm="SBO:0000176" id="R_PTRCabcNo4" name="Putrescine transport via ABC system (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_PTRCabc" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GA7" stoichiometry="0.00092593" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PTRCabcNo5" sboTerm="SBO:0000176" id="R_PTRCabcNo5" name="Putrescine transport via ABC system (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88CK1" stoichiometry="5.3522e-07" constant="true"/> <speciesReference species="M_pmet_PTRCabc" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5179"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHQTiNo1" sboTerm="SBO:0000176" id="R_DHQTiNo1" name="3-dehydroquinate dehydratase, irreversible (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IJ6" stoichiometry="8.9606e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="R_FOMETRiNo1" sboTerm="SBO:0000176" id="R_FOMETRiNo1" name="Aminomethyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_5fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P67" stoichiometry="1.3291e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0986"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSCITNo1" sboTerm="SBO:0000176" id="R_PSCITNo1" name="3-phosphoshikimate 1-carboxyvinyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M05" stoichiometry="1.0602e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3psme_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1770"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TAL" sboTerm="SBO:0000176" id="R_arm_TAL" name="Threonine ammonia-lyase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TAL" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3446"/> <fbc:geneProductRef fbc:geneProduct="PP_4430"/> <fbc:geneProductRef fbc:geneProduct="PP_5149"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TALNo1" sboTerm="SBO:0000176" id="R_TALNo1" name="Threonine ammonia-lyase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_TAL" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HB4" stoichiometry="2.864e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3446"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TALNo2" sboTerm="SBO:0000176" id="R_TALNo2" name="Threonine ammonia-lyase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_TAL" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EM4" stoichiometry="2.864e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4430"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TALNo3" sboTerm="SBO:0000176" id="R_TALNo3" name="Threonine ammonia-lyase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_TAL" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CN1" stoichiometry="2.864e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5149"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAN1PTNo1" sboTerm="SBO:0000176" id="R_MAN1PTNo1" name="Mannose 1 phosphate guanylyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M00" stoichiometry="1.418e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gdpmann_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1776"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FACOAL100p" sboTerm="SBO:0000176" id="R_arm_FACOAL100p" name="Fatty acid CoA ligase decanoate peroxisomal (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FACOAL100p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> <fbc:geneProductRef fbc:geneProduct="PP_3553"/> <fbc:geneProductRef fbc:geneProduct="PP_4243"/> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100pNo1" sboTerm="SBO:0000176" id="R_FACOAL100pNo1" name="Fatty acid CoA ligase decanoate peroxisomal (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88PT5" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL100p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0763"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100pNo2" sboTerm="SBO:0000176" id="R_FACOAL100pNo2" name="Fatty acid CoA ligase decanoate peroxisomal (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_FACOAL100p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H12" stoichiometry="0.0095785" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3553"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100pNo3" sboTerm="SBO:0000176" id="R_FACOAL100pNo3" name="Fatty acid CoA ligase decanoate peroxisomal (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_FACOAL100p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F56" stoichiometry="0.0095785" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4243"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100pNo4" sboTerm="SBO:0000176" id="R_FACOAL100pNo4" name="Fatty acid CoA ligase decanoate peroxisomal (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88EB7" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL100p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4549"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FACOAL100pNo5" sboTerm="SBO:0000176" id="R_FACOAL100pNo5" name="Fatty acid CoA ligase decanoate peroxisomal (No5)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88EB6" stoichiometry="0.0095785" constant="true"/> <speciesReference species="M_pmet_FACOAL100p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4550"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGDbNo1" sboTerm="SBO:0000176" id="R_AKGDbNo1" name="Oxoglutarate dehydrogenase (dihydrolipoamide S-succinyltransferase) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sdhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FB0" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SAT" sboTerm="SBO:0000176" id="R_arm_SAT" name="Serine O-acetyltransferase (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SAT" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0228"/> <fbc:geneProductRef fbc:geneProduct="PP_0840"/> <fbc:geneProductRef fbc:geneProduct="PP_1110"/> <fbc:geneProductRef fbc:geneProduct="PP_3136"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SATNo1" sboTerm="SBO:0000176" id="R_SATNo1" name="Serine O-acetyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88RA5" stoichiometry="1.3889e-06" constant="true"/> <speciesReference species="M_pmet_SAT" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0228"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SATNo2" sboTerm="SBO:0000176" id="R_SATNo2" name="Serine O-acetyltransferase (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88PL0" stoichiometry="1.3889e-06" constant="true"/> <speciesReference species="M_pmet_SAT" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0840"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SATNo3" sboTerm="SBO:0000176" id="R_SATNo3" name="Serine O-acetyltransferase (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_SAT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NU4" stoichiometry="1.3889e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1110"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SATNo4" sboTerm="SBO:0000176" id="R_SATNo4" name="Serine O-acetyltransferase (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_SAT" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88I65" stoichiometry="1.3889e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3136"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_13PPDH2No1" sboTerm="SBO:0000176" id="R_13PPDH2No1" name="1,3-propanediol dehydrogenase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lald__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K01" stoichiometry="6.1728e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_13ppd_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2492"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_2HESRNo1" sboTerm="SBO:0000176" id="R_2HESRNo1" name="2-hydroxyethyldisulfide reductase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/> <speciesReference species="M_dtgcl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IR6" stoichiometry="5.9102e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mercpeth_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2933"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD2yNo1" sboTerm="SBO:0000176" id="R_ALDD2yNo1" name="Aldehyde dehydrogenase (acetaldehyde, NADP) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K01" stoichiometry="4.079e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2492"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALDD3y2No1" sboTerm="SBO:0000176" id="R_ALDD3y2No1" name="Aldehyde dehydrogenase (propanal, NADP) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K01" stoichiometry="0.00038052" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2492"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMALT1No1" sboTerm="SBO:0000176" id="R_AMALT1No1" name="Amylomaltase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malttr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FN7" stoichiometry="8.7627e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_maltttr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4052"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CHLPiNo1" sboTerm="SBO:0000176" id="R_CHLPiNo1" name="Choline_phosphate phosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cholp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CQ0" stoichiometry="3.5162e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5130"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHPiNo1" sboTerm="SBO:0000176" id="R_ETHPiNo1" name="Ethanolamine_phosphate phosphatase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ethamp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CQ0" stoichiometry="3.5162e-11" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etha_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5130"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GAPDi_nadp" sboTerm="SBO:0000176" id="R_arm_GAPDi_nadp" name="Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GAPDi_nadp" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0665"/> <fbc:geneProductRef fbc:geneProduct="PP_3443"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPDi_nadpNo1" sboTerm="SBO:0000176" id="R_GAPDi_nadpNo1" name="Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_GAPDi_nadp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q33" stoichiometry="1.6804e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0665"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPDi_nadpNo2" sboTerm="SBO:0000176" id="R_GAPDi_nadpNo2" name="Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_pmet_GAPDi_nadp" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HB7" stoichiometry="1.6804e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3443"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METNANo1" sboTerm="SBO:0000176" id="R_METNANo1" name="L-amino acid N-acyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DH9" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_acmet_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4846"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTSOXINACTNo1" sboTerm="SBO:0000176" id="R_MTSOXINACTNo1" name="L_Aminoacid acyltransferase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mtsoxin_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DH9" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_acmtsoxin_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4846"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHGONo1" sboTerm="SBO:0000176" id="R_SHGONo1" name="S-2-hydroxyglutarate oxidase (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_S2hglut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IT9" stoichiometry="5.9102e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2910"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3AIBT2_REVNo1" sboTerm="SBO:0000176" id="R_3AIBT2_REVNo1" name="L_3_aminoisobutyrate_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3aib_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q98" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_mmtsa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR100_REVNo1" sboTerm="SBO:0000176" id="R_3OAR100_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C100_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hdecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR120_REVNo1" sboTerm="SBO:0000176" id="R_3OAR120_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C120_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hddecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddecACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR140_REVNo1" sboTerm="SBO:0000176" id="R_3OAR140_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C140_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hmrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3omrsACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR160_REVNo1" sboTerm="SBO:0000176" id="R_3OAR160_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C160_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hpalmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opalmACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR180_REVNo1" sboTerm="SBO:0000176" id="R_3OAR180_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C180_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hoctaACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ooctdACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR40_REVNo1" sboTerm="SBO:0000176" id="R_3OAR40_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C40_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3haACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_actACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR60_REVNo1" sboTerm="SBO:0000176" id="R_3OAR60_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C60_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohexACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_3OAR80_REVNo1" sboTerm="SBO:0000176" id="R_3OAR80_REVNo1" name="3_oxoacyl_acyl_carrier_protein_reductase__n_C80_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hoctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ooctACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OT_REVNo1" sboTerm="SBO:0000176" id="R_4OT_REVNo1" name="4_oxalocrotonate_tautomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_oxalc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JY9" stoichiometry="9.6451e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2hmc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2504"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_4OT2_REVNo1" sboTerm="SBO:0000176" id="R_4OT2_REVNo1" name="4_oxalocrotonate_tautomerase__pXylene_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2omcm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88JY9" stoichiometry="9.6451e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hmccm_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2504"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_A5PISO_REV" sboTerm="SBO:0000176" id="R_arm_A5PISO_REV" name="arabinose_5_phosphate_isomerase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ara5p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_A5PISO_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0957"/> <fbc:geneProductRef fbc:geneProduct="PP_1806"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_A5PISO_REVNo1" sboTerm="SBO:0000176" id="R_A5PISO_REVNo1" name="arabinose_5_phosphate_isomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88P95" stoichiometry="1.9701e-06" constant="true"/> <speciesReference species="M_pmet_A5PISO_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0957"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_A5PISO_REVNo2" sboTerm="SBO:0000176" id="R_A5PISO_REVNo2" name="arabinose_5_phosphate_isomerase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LX1" stoichiometry="1.9701e-06" constant="true"/> <speciesReference species="M_pmet_A5PISO_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1806"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACACT1r_REV" sboTerm="SBO:0000176" id="R_arm_ACACT1r_REV" name="acetyl_CoA_C_acetyltransferase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACACT1r_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> <fbc:geneProductRef fbc:geneProduct="PP_3754"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACT1r_REVNo1" sboTerm="SBO:0000176" id="R_ACACT1r_REVNo1" name="acetyl_CoA_C_acetyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L84" stoichiometry="1.8769e-05" constant="true"/> <speciesReference species="M_pmet_ACACT1r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACT1r_REVNo2" sboTerm="SBO:0000176" id="R_ACACT1r_REVNo2" name="acetyl_CoA_C_acetyltransferase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88E32" stoichiometry="5.5556e-11" constant="true"/> <speciesReference species="M_pmet_ACACT1r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACACT1r_REVNo3" sboTerm="SBO:0000176" id="R_ACACT1r_REVNo3" name="acetyl_CoA_C_acetyltransferase (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GH0" stoichiometry="5.5556e-11" constant="true"/> <speciesReference species="M_pmet_ACACT1r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3754"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD10f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD10f_REVNo1" name="acyl_CoA_dehydrogenase__heptanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hp2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD11f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD11f_REVNo1" name="acyl_CoA_dehydrogenase__nonanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nonacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD12f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD12f_REV" name="acyl_CoA_dehydrogenase__Phenyldecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdca2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD12f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD12f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD12f_REVNo1" name="acyl_CoA_dehydrogenase__Phenyldecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD12f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdcacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD12f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD12f_REVNo2" name="acyl_CoA_dehydrogenase__Phenyldecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD12f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdcacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD13f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD13f_REV" name="acyl_CoA_dehydrogenase__Phenylnonanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnona2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD13f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD13f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD13f_REVNo1" name="acyl_CoA_dehydrogenase__Phenylnonanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD13f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnonacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD13f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD13f_REVNo2" name="acyl_CoA_dehydrogenase__Phenylnonanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD13f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnonacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD14f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD14f_REV" name="acyl_CoA_dehydrogenase__Phenyloctanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pocta2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD14f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD14f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD14f_REVNo1" name="acyl_CoA_dehydrogenase__Phenyloctanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD14f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_poctacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD14f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD14f_REVNo2" name="acyl_CoA_dehydrogenase__Phenyloctanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD14f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_poctacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD15f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD15f_REV" name="acyl_CoA_dehydrogenase__Phenylheptanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_php2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD15f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD15f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD15f_REVNo1" name="acyl_CoA_dehydrogenase__Phenylheptanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD15f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD15f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD15f_REVNo2" name="acyl_CoA_dehydrogenase__Phenylheptanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD15f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD16f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD16f_REV" name="acyl_CoA_dehydrogenase__Phenylhexanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxa2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD16f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD16f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD16f_REVNo1" name="acyl_CoA_dehydrogenase__Phenylhexanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD16f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD16f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD16f_REVNo2" name="acyl_CoA_dehydrogenase__Phenylhexanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD16f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD17f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD17f_REV" name="acyl_CoA_dehydrogenase__Phenylpentanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppt2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD17f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD17f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD17f_REVNo1" name="acyl_CoA_dehydrogenase__Phenylpentanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD17f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD17f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD17f_REVNo2" name="acyl_CoA_dehydrogenase__Phenylpentanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD17f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD18f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD18f_REV" name="acyl_CoA_dehydrogenase__Phenylbutyryl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD18f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD18f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD18f_REVNo1" name="acyl_CoA_dehydrogenase__Phenylbutyryl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD18f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD18f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD18f_REVNo2" name="acyl_CoA_dehydrogenase__Phenylbutyryl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD18f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD19f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD19f_REV" name="acyl_CoA_dehydrogenase__Phenylpropionyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cinmcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD19f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD19f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD19f_REVNo1" name="acyl_CoA_dehydrogenase__Phenylpropionyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD19f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD19f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD19f_REVNo2" name="acyl_CoA_dehydrogenase__Phenylpropionyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD19f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phppcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD1f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD1f_REV" name="acyl_CoA_dehydrogenase__butanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD1f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD1f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD1f_REVNo1" name="acyl_CoA_dehydrogenase__butanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD1f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD1f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD1f_REVNo2" name="acyl_CoA_dehydrogenase__butanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS3" stoichiometry="3.2527e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD1f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD20f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD20f_REVNo1" name="acyl_CoA_dehydrogenase__6_acetylthiohexanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6ath2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD21f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD21f_REVNo1" name="acyl_CoA_dehydrogenase__4_acetylthiobutanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4atb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD22f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD22f_REVNo1" name="acyl_CoA_dehydrogenase__vaccenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD23f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD23f_REVNo1" name="acyl_CoA_dehydrogenase__cis_hexadec_9_enoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD24f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD24f_REVNo1" name="acyl_CoA_dehydrogenase__cis_tetradec_7_enoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD25f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD25f_REVNo1" name="acyl_CoA_dehydrogenase__cis_dodedec_5_enoyl_CoA__C121d5_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ddecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD26f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD26f_REVNo1" name="acyl_CoA_dehydrogenase__acyl_CoA_dehydrogenase__oleicyl_CoA___C181d9_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ode2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_odecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD27f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD27f_REVNo1" name="acyl_CoA_dehydrogenase__cis_hexadec_7_enoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd7_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd7coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD28f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD28f_REVNo1" name="acyl_CoA_dehydrogenase__cis_tetradec_5_enoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD29f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD29f_REVNo1" name="acyl_CoA_dehydrogenase__petroselenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptsla2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptslacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD2f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD2f_REV" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD2f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD2f_REVNo1" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS3" stoichiometry="3.2527e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD2f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD2f_REVNo2" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD2f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2f_REVNo3" sboTerm="SBO:0000176" id="R_ACOAD2f_REVNo3" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD2f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD2f_REVNo4" sboTerm="SBO:0000176" id="R_ACOAD2f_REVNo4" name="acyl_CoA_dehydrogenase__hexanoyl_CoA_ (reversible) (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD2f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD30f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD30f_REVNo1" name="acyl_CoA_dehydrogenase__cis_hexadec_4_enoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd4coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD31f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD31f_REVNo1" name="acyl_CoA_dehydrogenase__linoleic_coenzyme_A_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD32f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD32f_REVNo1" name="acyl_CoA_dehydrogenase__cis_cis_hexadec_7_10_dienoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd710_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd_7_10_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD33f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD33f_REVNo1" name="acyl_CoA_dehydrogenase__cis_cis_tetradec_5_8_dienoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td58_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td_5_8_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD34f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD34f_REVNo1" name="acyl_CoA_dehydrogenase__4_cis_decenoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dec4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD3f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD3f_REV" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD3f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD3f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD3f_REVNo1" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD3f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD3f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD3f_REVNo2" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD3f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD3f_REVNo3" sboTerm="SBO:0000176" id="R_ACOAD3f_REVNo3" name="acyl_CoA_dehydrogenase__octanoyl_CoA_ (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD3f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD4f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD4f_REV" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD4f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD4f_REVNo1" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD4f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD4f_REVNo2" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD4f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4f_REVNo3" sboTerm="SBO:0000176" id="R_ACOAD4f_REVNo3" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD4f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD4f_REVNo4" sboTerm="SBO:0000176" id="R_ACOAD4f_REVNo4" name="acyl_CoA_dehydrogenase__decanoyl_CoA_ (reversible) (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K54" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD4f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD5f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD5f_REV" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD5f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD5f_REVNo1" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD5f_REVNo2" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5f_REVNo3" sboTerm="SBO:0000176" id="R_ACOAD5f_REVNo3" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD5f_REVNo4" sboTerm="SBO:0000176" id="R_ACOAD5f_REVNo4" name="acyl_CoA_dehydrogenase__dodecanoyl_CoA_ (reversible) (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K54" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD5f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD6f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD6f_REV" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD6f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD6f_REVNo1" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD6f_REVNo2" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L87" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2048"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6f_REVNo3" sboTerm="SBO:0000176" id="R_ACOAD6f_REVNo3" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L96" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2039"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD6f_REVNo4" sboTerm="SBO:0000176" id="R_ACOAD6f_REVNo4" name="acyl_CoA_dehydrogenase__tetradecanoyl_CoA_ (reversible) (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K54" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD6f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2437"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD7f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD7f_REV" name="acyl_CoA_dehydrogenase__hexadecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD7f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD7f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD7f_REVNo1" name="acyl_CoA_dehydrogenase__hexadecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD7f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD7f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD7f_REVNo2" name="acyl_CoA_dehydrogenase__hexadecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD7f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACOAD8f_REV" sboTerm="SBO:0000176" id="R_arm_ACOAD8f_REV" name="acyl_CoA_dehydrogenase__octadecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_od2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACOAD8f_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD8f_REVNo1" sboTerm="SBO:0000176" id="R_ACOAD8f_REVNo1" name="acyl_CoA_dehydrogenase__octadecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD8f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOAD8f_REVNo2" sboTerm="SBO:0000176" id="R_ACOAD8f_REVNo2" name="acyl_CoA_dehydrogenase__octadecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QW6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_ACOAD8f_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_stcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0368"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACOATA_REVNo1" sboTerm="SBO:0000176" id="R_ACOATA_REVNo1" name="Acetyl_CoA_ACP_transacylase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FC3" stoichiometry="0.00059102" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4175"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACONCtex_REV" sboTerm="SBO:0000176" id="R_arm_ACONCtex_REV" name="cis_aconitate_transport__external (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACONCtex_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONCtex_REVNo1" sboTerm="SBO:0000176" id="R_ACONCtex_REVNo1" name="cis_aconitate_transport__external (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MZ9" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_ACONCtex_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONCtex_REVNo2" sboTerm="SBO:0000176" id="R_ACONCtex_REVNo2" name="cis_aconitate_transport__external (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L77" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_ACONCtex_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACONTa_REV" sboTerm="SBO:0000176" id="R_arm_ACONTa_REV" name="aconitase__half_reaction_A__Citrate_hydro_lyase_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACONTa_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTa_REVNo1" sboTerm="SBO:0000176" id="R_ACONTa_REVNo1" name="aconitase__half_reaction_A__Citrate_hydro_lyase_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L24" stoichiometry="5.2411e-05" constant="true"/> <speciesReference species="M_pmet_ACONTa_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTa_REVNo2" sboTerm="SBO:0000176" id="R_ACONTa_REVNo2" name="aconitase__half_reaction_A__Citrate_hydro_lyase_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KF1" stoichiometry="5.2411e-05" constant="true"/> <speciesReference species="M_pmet_ACONTa_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ACONTb_REV" sboTerm="SBO:0000176" id="R_arm_ACONTb_REV" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ACONTb_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTb_REVNo1" sboTerm="SBO:0000176" id="R_ACONTb_REVNo1" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KF1" stoichiometry="0.00025253" constant="true"/> <speciesReference species="M_pmet_ACONTb_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2339"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ACONTb_REVNo2" sboTerm="SBO:0000176" id="R_ACONTb_REVNo2" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L24" stoichiometry="0.00025253" constant="true"/> <speciesReference species="M_pmet_ACONTb_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2112"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSL1r_REVNo1" sboTerm="SBO:0000176" id="R_ADSL1r_REVNo1" name="adenylsuccinate_lyase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FR7" stoichiometry="9.5785e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dcamp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4016"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ADSL2r_REVNo1" sboTerm="SBO:0000176" id="R_ADSL2r_REVNo1" name="adenylosuccinate_lyase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aicar_c" stoichiometry="1" constant="true"/> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FR7" stoichiometry="9.5785e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25aics_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4016"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AHC_REVNo1" sboTerm="SBO:0000176" id="R_AHC_REVNo1" name="adenosylhomocysteinase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_A0A140FWS3" stoichiometry="4.1671e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4976"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AIRC3_REVNo1" sboTerm="SBO:0000176" id="R_AIRC3_REVNo1" name="phosphoribosylaminoimidazole_carboxylase__mutase_rxn_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5caiz_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88C47" stoichiometry="1.7806e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_5aizc_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5336"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGDa_REVNo1" sboTerm="SBO:0000176" id="R_AKGDa_REVNo1" name="oxoglutarate_dehydrogenase__lipoamide_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sdhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FA9" stoichiometry="0.00020281" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AKGDbr_REVNo1" sboTerm="SBO:0000176" id="R_AKGDbr_REVNo1" name="oxoglutarate_dehydrogenase__dihydrolipoamide_S_succinyltransferase__reversible (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FB0" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sdhlam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4188"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAALAtex_REVNo1" sboTerm="SBO:0000176" id="R_ALAALAtex_REVNo1" name="D_alanyl_D_alanine__DalaDala__transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaala_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALAHIStex_REVNo1" sboTerm="SBO:0000176" id="R_ALAHIStex_REVNo1" name="L_Alaninylhistidine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alahis_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alahis_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALALEUtex_REVNo1" sboTerm="SBO:0000176" id="R_ALALEUtex_REVNo1" name="L_Alaninylleucine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alaleu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alaleu_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALATA_L_REV" sboTerm="SBO:0000176" id="R_arm_ALATA_L_REV" name="L_alanine_transaminase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALATA_L_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1872"/> <fbc:geneProductRef fbc:geneProduct="PP_0817"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATA_L_REVNo1" sboTerm="SBO:0000176" id="R_ALATA_L_REVNo1" name="L_alanine_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LQ7" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_ALATA_L_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1872"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATA_L_REVNo2" sboTerm="SBO:0000176" id="R_ALATA_L_REVNo2" name="L_alanine_transaminase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PN2" stoichiometry="4.8733e-05" constant="true"/> <speciesReference species="M_pmet_ALATA_L_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0817"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATHRtex_REVNo1" sboTerm="SBO:0000176" id="R_ALATHRtex_REVNo1" name="L_Alaninylthreonine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alathr_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alathr_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALATRPtex_REVNo1" sboTerm="SBO:0000176" id="R_ALATRPtex_REVNo1" name="L_Alaninyltryptophan_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_alatrp_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_alatrp_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALCD19_REV" sboTerm="SBO:0000176" id="R_arm_ALCD19_REV" name="alcohol_dehydrogenase__glycerol_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALCD19_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD19_REVNo1" sboTerm="SBO:0000176" id="R_ALCD19_REVNo1" name="alcohol_dehydrogenase__glycerol_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE9" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_ALCD19_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD19_REVNo2" sboTerm="SBO:0000176" id="R_ALCD19_REVNo2" name="alcohol_dehydrogenase__glycerol_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JF5" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_ALCD19_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD19_REVNo3" sboTerm="SBO:0000176" id="R_ALCD19_REVNo3" name="alcohol_dehydrogenase__glycerol_ (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MF5" stoichiometry="1.2513e-06" constant="true"/> <speciesReference species="M_pmet_ALCD19_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ALCD2x_REV" sboTerm="SBO:0000176" id="R_arm_ALCD2x_REV" name="alcohol_dehydrogenase__ethanol_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ALCD2x_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3839"/> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD2x_REVNo1" sboTerm="SBO:0000176" id="R_ALCD2x_REVNo1" name="alcohol_dehydrogenase__ethanol_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88G86" stoichiometry="4.079e-07" constant="true"/> <speciesReference species="M_pmet_ALCD2x_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3839"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ALCD2x_REVNo2" sboTerm="SBO:0000176" id="R_ALCD2x_REVNo2" name="alcohol_dehydrogenase__ethanol_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MF5" stoichiometry="1.2513e-06" constant="true"/> <speciesReference species="M_pmet_ALCD2x_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMAOTr_REVNo1" sboTerm="SBO:0000176" id="R_AMAOTr_REVNo1" name="adenosylmethionine_8_amino_7_oxononanoate_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_amob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dann_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D44" stoichiometry="0.00027778" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_8aonn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4984"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_APATr_REVNo1" sboTerm="SBO:0000176" id="R_APATr_REVNo1" name="B_alanine_pyruvate_aminotransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_msa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88Q98" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0596"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARGtex_REVNo1" sboTerm="SBO:0000176" id="R_ARGtex_REVNo1" name="L_arginine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NK1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1206"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ARUH_REVNo1" sboTerm="SBO:0000176" id="R_ARUH_REVNo1" name="L_Arginine_pyruvate_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5g2oxpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK0" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3721"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASAD_REVNo1" sboTerm="SBO:0000176" id="R_ASAD_REVNo1" name="aspartate_semialdehyde_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4pasp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LE4" stoichiometry="1.7361e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1989"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ASPTA_REV" sboTerm="SBO:0000176" id="R_arm_ASPTA_REV" name="aspartate_transaminase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ASPTA_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3721"/> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPTA_REVNo1" sboTerm="SBO:0000176" id="R_ASPTA_REVNo1" name="aspartate_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GK0" stoichiometry="5.5556e-07" constant="true"/> <speciesReference species="M_pmet_ASPTA_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3721"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ASPTA_REVNo2" sboTerm="SBO:0000176" id="R_ASPTA_REVNo2" name="aspartate_transaminase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="5.5556e-07" constant="true"/> <speciesReference species="M_pmet_ASPTA_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ATHRDHr_REVNo1" sboTerm="SBO:0000176" id="R_ATHRDHr_REVNo1" name="L_allo_threonine_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2aobut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DG3" stoichiometry="4.8225e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_athr__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4862"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAALAtex_REVNo1" sboTerm="SBO:0000176" id="R_BALAALAtex_REVNo1" name="beta_alanyl_L_alanine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balaala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balaala_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALABALAtex_REVNo1" sboTerm="SBO:0000176" id="R_BALABALAtex_REVNo1" name="beta_alanyl_beta_alanine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balabala_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balabala_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALAGLYtex_REVNo1" sboTerm="SBO:0000176" id="R_BALAGLYtex_REVNo1" name="beta_alanyl_L_glycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balagly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balagly_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BALALEUtex_REVNo1" sboTerm="SBO:0000176" id="R_BALALEUtex_REVNo1" name="L_Histidinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balaleu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balaleu_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BDH_REVNo1" sboTerm="SBO:0000176" id="R_BDH_REVNo1" name="_R__3_HydroxybutanoateNAD_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IC6" stoichiometry="2.3148e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3073"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BLAMDtex_REVNo1" sboTerm="SBO:0000176" id="R_BLAMDtex_REVNo1" name="beta_Alaninamide_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_balamd_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_balamd_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BTDD_RR_REVNo1" sboTerm="SBO:0000176" id="R_BTDD_RR_REVNo1" name="_R_R__butanediol_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QE2" stoichiometry="1.8519e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_btd_RR_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0552"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_BUTSO3tex_REVNo1" sboTerm="SBO:0000176" id="R_BUTSO3tex_REVNo1" name="butanesulfonate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_butso3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_butso3_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CARNtex_REVNo1" sboTerm="SBO:0000176" id="R_CARNtex_REVNo1" name="L_Carnosine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_carn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_carn_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBIAT_REVNo1" sboTerm="SBO:0000176" id="R_CBIAT_REVNo1" name="Cobinamide_adenyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA2" stoichiometry="0.0046296" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1672"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CBLAT_REVNo1" sboTerm="SBO:0000176" id="R_CBLAT_REVNo1" name="cob_I_alamin_adenosyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adocbl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MA2" stoichiometry="0.0046296" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_cbl1_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1672"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CGLYtex_REVNo1" sboTerm="SBO:0000176" id="R_CGLYtex_REVNo1" name="L_Cysteinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cgly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_CITtex_REV" sboTerm="SBO:0000176" id="R_arm_CITtex_REV" name="citrate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_CITtex_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CITtex_REVNo1" sboTerm="SBO:0000176" id="R_CITtex_REVNo1" name="citrate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MZ9" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_CITtex_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CITtex_REVNo2" sboTerm="SBO:0000176" id="R_CITtex_REVNo2" name="citrate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L77" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_CITtex_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_cit_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS120pp_REVNo1" sboTerm="SBO:0000176" id="R_CLPNS120pp_REVNo1" name="cardiolipin_synthase__periplasmic__n_C120_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn120_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg120_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS140pp_REVNo1" sboTerm="SBO:0000176" id="R_CLPNS140pp_REVNo1" name="cardiolipin_synthase__periplasmic__n_C140_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn140_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg140_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS141pp_REVNo1" sboTerm="SBO:0000176" id="R_CLPNS141pp_REVNo1" name="cardiolipin_synthase__periplasmic__n_C141_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn141_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg141_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS160pp_REVNo1" sboTerm="SBO:0000176" id="R_CLPNS160pp_REVNo1" name="cardiolipin_synthase__periplasmic__n_C160_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn160_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg160_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS161pp_REVNo1" sboTerm="SBO:0000176" id="R_CLPNS161pp_REVNo1" name="cardiolipin_synthase__periplasmic__n_C161_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn161_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg161_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS180pp_REVNo1" sboTerm="SBO:0000176" id="R_CLPNS180pp_REVNo1" name="cardiolipin_synthase__periplasmic__n_C180_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn180_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg180_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CLPNS181pp_REVNo1" sboTerm="SBO:0000176" id="R_CLPNS181pp_REVNo1" name="cardiolipin_synthase__periplasmic__n_C181_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn181_p" stoichiometry="1" constant="true"/> <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT9" stoichiometry="0.0015179" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg181_p" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_CMT2_REVNo1" sboTerm="SBO:0000176" id="R_CMT2_REVNo1" name="_cytosine_5___methyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5mcsn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FU3" stoichiometry="0.04085" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_csn_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3989"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DABAAT2_REV" sboTerm="SBO:0000176" id="R_arm_DABAAT2_REV" name="DABA_aminotransferase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DABAAT2_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2800"/> <fbc:geneProductRef fbc:geneProduct="PP_4223"/> <fbc:geneProductRef fbc:geneProduct="PP_4421"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DABAAT2_REVNo1" sboTerm="SBO:0000176" id="R_DABAAT2_REVNo1" name="DABA_aminotransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88J49" stoichiometry="2.3148e-06" constant="true"/> <speciesReference species="M_pmet_DABAAT2_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_24dab_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2800"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DABAAT2_REVNo2" sboTerm="SBO:0000176" id="R_DABAAT2_REVNo2" name="DABA_aminotransferase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88F75" stoichiometry="2.3148e-06" constant="true"/> <speciesReference species="M_pmet_DABAAT2_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_24dab_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4223"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DABAAT2_REVNo3" sboTerm="SBO:0000176" id="R_DABAAT2_REVNo3" name="DABA_aminotransferase (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88EN3" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_DABAAT2_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_24dab_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4421"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DAPE_REVNo1" sboTerm="SBO:0000176" id="R_DAPE_REVNo1" name="diaminopimelate_epimerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_26dap__M_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GD4" stoichiometry="2.1701e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_26dap_LL_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3790"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHACOAH_REVNo1" sboTerm="SBO:0000176" id="R_DHACOAH_REVNo1" name="2_3_dehydroadipyl_CoA_hydratase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hadpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HR9" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_23dhacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHFR_REVNo1" sboTerm="SBO:0000176" id="R_DHFR_REVNo1" name="dihydrofolate_reductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CP8" stoichiometry="1.7806e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5132"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHNPTE_REVNo1" sboTerm="SBO:0000176" id="R_DHNPTE_REVNo1" name="Dihydroneopterin_epimerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QU4" stoichiometry="0.0031211" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhnpt_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0392"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DHQD_REVNo1" sboTerm="SBO:0000176" id="R_DHQD_REVNo1" name="3_dehydroquinate_dehydratase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88IJ6" stoichiometry="8.9606e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3003"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSOXGAT_REVNo1" sboTerm="SBO:0000176" id="R_DLYSOXGAT_REVNo1" name="D_Lysine2_oxoglutarate_aminotransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYSPYRAT_REVNo1" sboTerm="SBO:0000176" id="R_DLYSPYRAT_REVNo1" name="D_Lysinepyruvate_aminotransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DLYStex_REVNo1" sboTerm="SBO:0000176" id="R_DLYStex_REVNo1" name="D_lysine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lys__D_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NK1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lys__D_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1206"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMGDH2_REVNo1" sboTerm="SBO:0000176" id="R_DMGDH2_REVNo1" name="dimethylglycine_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sarcs_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R18" stoichiometry="2.9869e-07" constant="true"/> <speciesReference species="M_prot_Q88R19" stoichiometry="2.9869e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmgly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0315"/> <fbc:geneProductRef fbc:geneProduct="PP_0316"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DMSO2tex_REVNo1" sboTerm="SBO:0000176" id="R_DMSO2tex_REVNo1" name="dimethyl_sulfone_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dmso2_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dmso2_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_DOPDH_REV" sboTerm="SBO:0000176" id="R_arm_DOPDH_REV" name="ketoglutarate_semialdehyde_dehydrogenase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_DOPDH_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3602"/> <fbc:geneProductRef fbc:geneProduct="PP_1256"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DOPDH_REVNo1" sboTerm="SBO:0000176" id="R_DOPDH_REVNo1" name="ketoglutarate_semialdehyde_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GW5" stoichiometry="1.41e-06" constant="true"/> <speciesReference species="M_pmet_DOPDH_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25dop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3602"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DOPDH_REVNo2" sboTerm="SBO:0000176" id="R_DOPDH_REVNo2" name="ketoglutarate_semialdehyde_dehydrogenase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88NF5" stoichiometry="1.41e-06" constant="true"/> <speciesReference species="M_pmet_DOPDH_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_25dop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1256"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DURAD_REVNo1" sboTerm="SBO:0000176" id="R_DURAD_REVNo1" name="dihydrouracil_dehydrogenase__NADP_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FQ0" stoichiometry="0.00017361" constant="true"/> <speciesReference species="M_prot_Q88FQ1" stoichiometry="0.00017361" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_56dura_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4038"/> <fbc:geneProductRef fbc:geneProduct="PP_4037"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_DURAD2_REVNo1" sboTerm="SBO:0000176" id="R_DURAD2_REVNo1" name="dihydrothymin_dehydrogenase__NADP_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thym_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FQ0" stoichiometry="0.00017361" constant="true"/> <speciesReference species="M_prot_Q88FQ1" stoichiometry="0.00017361" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_56dthm_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4038"/> <fbc:geneProductRef fbc:geneProduct="PP_4037"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_E4PD_REVNo1" sboTerm="SBO:0000176" id="R_E4PD_REVNo1" name="Erythrose_4_phosphate_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4per_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D63" stoichiometry="1.3889e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4964"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH1_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH1_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxybutanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH14_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH14_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyheptanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hp2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH15_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH15_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxynonanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nona2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH16_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH16_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenyldecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pdca2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH17_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH17_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylnonanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pnona2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH18_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH18_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenyloctanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pocta2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH19_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH19_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylheptanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_php2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH2_REV" sboTerm="SBO:0000176" id="R_arm_ECOAH2_REV" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH2_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH2_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH2_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH2_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH2_REVNo2" sboTerm="SBO:0000176" id="R_ECOAH2_REVNo2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH2_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH20_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH20_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylhexanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phxa2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH21_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH21_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylpentanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hpptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ppt2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH22_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH22_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyphenylbutyryl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pb2coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH23_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH23_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy_6_acetylthiohexanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3h6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6ath2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH24_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH24_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy_4_acetylthiobutanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3h4atbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4atb2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH25_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH25_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__11Z__octadecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_vacc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hvacccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH26_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH26_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__9Z__hexadecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhdccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH27_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH27_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__7Z__tetradecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3htdccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH28_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH28_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__5Z__dodedecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dde2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hddccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH29_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH29_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__9Z__octadecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ode2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hodecoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH3_REV" sboTerm="SBO:0000176" id="R_arm_ECOAH3_REV" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oc2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH3_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH3_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH3_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH3_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hocoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH3_REVNo2" sboTerm="SBO:0000176" id="R_ECOAH3_REVNo2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH3_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hocoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH30_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH30_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__7Z__hexadecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd7_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhdd7coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH31_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH31_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__5Z__tetradecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tded5_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hdd5coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH32_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH32_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__6Z__octadecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptsla2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hptslacoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH33_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH33_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__4Z__hexadecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhdd4coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH34_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH34_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__9Z_12Z__octadec_dienyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lnlc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hlnlccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH35_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH35_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__7Z_10Z__hexadec_dienyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hd710_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhd710coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH36_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH36_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__5Z_8Z__tetradec_dienyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td58_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhd58coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH37_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH37_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__6Z__dodedecenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dd6_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hdd6coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH38_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH38_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxy__4Z__decenyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dec4_2_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hdec4coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH4_REV" sboTerm="SBO:0000176" id="R_arm_ECOAH4_REV" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH4_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH4_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH4_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH4_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH4_REVNo2" sboTerm="SBO:0000176" id="R_ECOAH4_REVNo2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH4_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH5_REV" sboTerm="SBO:0000176" id="R_arm_ECOAH5_REV" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydodecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH5_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH5_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH5_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydodecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH5_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hddcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH5_REVNo2" sboTerm="SBO:0000176" id="R_ECOAH5_REVNo2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxydodecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH5_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hddcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ECOAH6_REV" sboTerm="SBO:0000176" id="R_arm_ECOAH6_REV" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxytetradecanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ECOAH6_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> <fbc:geneProductRef fbc:geneProduct="PP_2136"/> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH6_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH6_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxytetradecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH6_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3htdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH6_REVNo2" sboTerm="SBO:0000176" id="R_ECOAH6_REVNo2" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxytetradecanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L88" stoichiometry="1.462e-05" constant="true"/> <speciesReference species="M_pmet_ECOAH6_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3htdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2047"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH7_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH7_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyhexadecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hhdcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ECOAH8_REVNo1" sboTerm="SBO:0000176" id="R_ECOAH8_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctadecanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_od2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hodcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ETHSO3tex_REVNo1" sboTerm="SBO:0000176" id="R_ETHSO3tex_REVNo1" name="ethanesulfonate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ethso3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ethso3_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FALDH2_REVNo1" sboTerm="SBO:0000176" id="R_FALDH2_REVNo1" name="formaldehyde_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_Sfglutth_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MF5" stoichiometry="1.2513e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hmgth_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1616"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FALDM_REVNo1" sboTerm="SBO:0000176" id="R_FALDM_REVNo1" name="formaldehyde_dismutase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_for_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R06" stoichiometry="2.7663e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fald_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0328"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FBA_REVNo1" sboTerm="SBO:0000176" id="R_FBA_REVNo1" name="fructose_bisphosphate_aldolase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D67" stoichiometry="0.00018155" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4960"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FMNR2r_REVNo1" sboTerm="SBO:0000176" id="R_FMNR2r_REVNo1" name="FMN_reductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO4r_REVNo1" sboTerm="SBO:0000176" id="R_FRDO4r_REVNo1" name="ferredoxin_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_prot_Q88PK3" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxr_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FRDO5r_REV" sboTerm="SBO:0000176" id="R_arm_FRDO5r_REV" name="ferredoxin_oxidoreductase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxo_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FRDO5r_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1625"/> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:and> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_1625"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO5r_REVNo1" sboTerm="SBO:0000176" id="R_FRDO5r_REVNo1" name="ferredoxin_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MD5" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FRDO5r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxr_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1638"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO5r_REVNo2" sboTerm="SBO:0000176" id="R_FRDO5r_REVNo2" name="ferredoxin_oxidoreductase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_pmet_FRDO5r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxr_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO6r_REVNo1" sboTerm="SBO:0000176" id="R_FRDO6r_REVNo1" name="ferredoxin_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxo_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxr_42_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FRDO7r_REVNo1" sboTerm="SBO:0000176" id="R_FRDO7r_REVNo1" name="ferredoxin_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fdxo_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88E22" stoichiometry="7.3857e-06" constant="true"/> <speciesReference species="M_prot_Q88PK3" stoichiometry="7.3857e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fdxr_22_c" stoichiometry="2" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_0847"/> <fbc:geneProductRef fbc:geneProduct="PP_4646"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_FUM_REV" sboTerm="SBO:0000176" id="R_arm_FUM_REV" name="fumarase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_FUM_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0944"/> <fbc:geneProductRef fbc:geneProduct="PP_1755"/> <fbc:geneProductRef fbc:geneProduct="PP_0897"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUM_REVNo1" sboTerm="SBO:0000176" id="R_FUM_REVNo1" name="fumarase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PA6" stoichiometry="2.4155e-07" constant="true"/> <speciesReference species="M_pmet_FUM_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0944"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_FUM_REVNo2" sboTerm="SBO:0000176" id="R_FUM_REVNo2" name="fumarase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PF3" stoichiometry="2.4155e-07" constant="true"/> <speciesReference species="M_pmet_FUM_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0897"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAD2ktpp_REVNo1" sboTerm="SBO:0000176" id="R_GAD2ktpp_REVNo1" name="gluconate_2_dehydrogenase__periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2dhglcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HH4" stoichiometry="2.2487e-07" constant="true"/> <speciesReference species="M_prot_Q88HH5" stoichiometry="2.2487e-07" constant="true"/> <speciesReference species="M_prot_Q88HH6" stoichiometry="2.2487e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glcn_p" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_3382"/> <fbc:geneProductRef fbc:geneProduct="PP_3383"/> <fbc:geneProductRef fbc:geneProduct="PP_3384"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GAPD_REV" sboTerm="SBO:0000176" id="R_arm_GAPD_REV" name="glyceraldehyde_3_phosphate_dehydrogenase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GAPD_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1009"/> <fbc:geneProductRef fbc:geneProduct="PP_2149"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPD_REVNo1" sboTerm="SBO:0000176" id="R_GAPD_REVNo1" name="glyceraldehyde_3_phosphate_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88P44" stoichiometry="3.1387e-07" constant="true"/> <speciesReference species="M_pmet_GAPD_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1009"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPD_REVNo2" sboTerm="SBO:0000176" id="R_GAPD_REVNo2" name="glyceraldehyde_3_phosphate_dehydrogenase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KZ0" stoichiometry="3.1387e-07" constant="true"/> <speciesReference species="M_pmet_GAPD_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2149"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GARFT_REVNo1" sboTerm="SBO:0000176" id="R_GARFT_REVNo1" name="phosphoribosylglycinamide_formyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fgam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MB0" stoichiometry="6.9444e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_10fthf_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gar_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GG15DAPDxr_REVNo1" sboTerm="SBO:0000176" id="R_GG15DAPDxr_REVNo1" name="gamma_glutamyl_delta_aminovalerate_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ggaptn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggbdapal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGDAPDxr_REVNo1" sboTerm="SBO:0000176" id="R_GGDAPDxr_REVNo1" name="gamma_glutamyl_beta_aminopropionate_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_ggala__B_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggbamppal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GGGABADxr_REVNo1" sboTerm="SBO:0000176" id="R_GGGABADxr_REVNo1" name="gamma_glutamyl_gamma_aminobutyric_acid_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gg4abut_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CA3" stoichiometry="3.1387e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ggbutal_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLNtex_REVNo1" sboTerm="SBO:0000176" id="R_GLNtex_REVNo1" name="L_glutamine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gln__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gln__L_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUDx_REVNo1" sboTerm="SBO:0000176" id="R_GLUDx_REVNo1" name="glutamate_dehydrogenase__NAD_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88L55" stoichiometry="8.0749e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2080"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLUtex_REVNo1" sboTerm="SBO:0000176" id="R_GLUtex_REVNo1" name="L_glutamate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glu__L_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYALDDr_REV" sboTerm="SBO:0000176" id="R_arm_GLYALDDr_REV" name="D_Glyceraldehyde_dehydrogenase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYALDDr_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYALDDr_REVNo1" sboTerm="SBO:0000176" id="R_GLYALDDr_REVNo1" name="D_Glyceraldehyde_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE9" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_GLYALDDr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0545"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYALDDr_REVNo2" sboTerm="SBO:0000176" id="R_GLYALDDr_REVNo2" name="D_Glyceraldehyde_dehydrogenase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88JF5" stoichiometry="0.0020276" constant="true"/> <speciesReference species="M_pmet_GLYALDDr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2694"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GLYBACT1r_REV" sboTerm="SBO:0000176" id="R_arm_GLYBACT1r_REV" name="Glycine_betaine_CoA_C_acetyltransferase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glybcoa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GLYBACT1r_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> <fbc:geneProductRef fbc:geneProduct="PP_0303"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBACT1r_REVNo1" sboTerm="SBO:0000176" id="R_GLYBACT1r_REVNo1" name="Glycine_betaine_CoA_C_acetyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L84" stoichiometry="1.8769e-05" constant="true"/> <speciesReference species="M_pmet_GLYBACT1r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhcrncoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2051"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBACT1r_REVNo2" sboTerm="SBO:0000176" id="R_GLYBACT1r_REVNo2" name="Glycine_betaine_CoA_C_acetyltransferase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88E32" stoichiometry="5.5556e-11" constant="true"/> <speciesReference species="M_pmet_GLYBACT1r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhcrncoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4636"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYBACT1r_REVNo3" sboTerm="SBO:0000176" id="R_GLYBACT1r_REVNo3" name="Glycine_betaine_CoA_C_acetyltransferase (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88R31" stoichiometry="0.00011574" constant="true"/> <speciesReference species="M_pmet_GLYBACT1r_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhcrncoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLNtex_REVNo1" sboTerm="SBO:0000176" id="R_GLYGLNtex_REVNo1" name="L_Glycinylglutamine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glygln_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glygln_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLUtex_REVNo1" sboTerm="SBO:0000176" id="R_GLYGLUtex_REVNo1" name="L_Histidinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyglu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyglu_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYGLYtex_REVNo1" sboTerm="SBO:0000176" id="R_GLYGLYtex_REVNo1" name="L_Glycinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glygly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glygly_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYMETtex_REVNo1" sboTerm="SBO:0000176" id="R_GLYMETtex_REVNo1" name="L_Glycinylmethionine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glymet_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glymet_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYPHEtex_REVNo1" sboTerm="SBO:0000176" id="R_GLYPHEtex_REVNo1" name="L_GlyPhe_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyphe_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyphe_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYSERtex_REVNo1" sboTerm="SBO:0000176" id="R_GLYSERtex_REVNo1" name="L_Glycinylserine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyser_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_glyser_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GLYtex_REVNo1" sboTerm="SBO:0000176" id="R_GLYtex_REVNo1" name="Glycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gly_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GTHOr_REVNo1" sboTerm="SBO:0000176" id="R_GTHOr_REVNo1" name="glutathione_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GA5" stoichiometry="7.4074e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3819"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_H2CO3D_REVNo1" sboTerm="SBO:0000176" id="R_H2CO3D_REVNo1" name="carboxylic_acid_dissociation (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2co3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RM9" stoichiometry="3.3752e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HADPCOADH3_REVNo1" sboTerm="SBO:0000176" id="R_HADPCOADH3_REVNo1" name="3_hydroxyadipyl_CoA_dehydrogenase__NAD_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS1" stoichiometry="6.105e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hadpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3282"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HCO3E_REVNo1" sboTerm="SBO:0000176" id="R_HCO3E_REVNo1" name="HCO3_equilibration_reaction (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88RM9" stoichiometry="3.3752e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISGLYtex_REVNo1" sboTerm="SBO:0000176" id="R_HISGLYtex_REVNo1" name="L_Histidinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hisgly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hisgly_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HISHIStex_REVNo1" sboTerm="SBO:0000176" id="R_HISHIStex_REVNo1" name="L_Histidinylhistidine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_hishis_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hishis_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HIStex_REVNo1" sboTerm="SBO:0000176" id="R_HIStex_REVNo1" name="L_histidine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_his__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PP9" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_his__L_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0799"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HIUHY_REVNo1" sboTerm="SBO:0000176" id="R_HIUHY_REVNo1" name="hydroxyisourate_hydrolase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5houdic_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F14" stoichiometry="1.615e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_5hiu_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4285"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HPYRI_REVNo1" sboTerm="SBO:0000176" id="R_HPYRI_REVNo1" name="hydroxypyruvate_isomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2h3oppan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F02" stoichiometry="2.0126e-08" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4298"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_HSDy_REV" sboTerm="SBO:0000176" id="R_arm_HSDy_REV" name="homoserine_dehydrogenase__NADPH_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_HSDy_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0664"/> <fbc:geneProductRef fbc:geneProduct="PP_1470"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HSDy_REVNo1" sboTerm="SBO:0000176" id="R_HSDy_REVNo1" name="homoserine_dehydrogenase__NADPH_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88Q34" stoichiometry="1.1574e-05" constant="true"/> <speciesReference species="M_pmet_HSDy_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0664"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_HSDy_REVNo2" sboTerm="SBO:0000176" id="R_HSDy_REVNo2" name="homoserine_dehydrogenase__NADPH_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MU8" stoichiometry="1.1574e-05" constant="true"/> <speciesReference species="M_pmet_HSDy_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_hom__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1470"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ICDHyr_REV" sboTerm="SBO:0000176" id="R_arm_ICDHyr_REV" name="isocitrate_dehydrogenase__NADP_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ICDHyr_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4012"/> <fbc:geneProductRef fbc:geneProduct="PP_4011"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICDHyr_REVNo1" sboTerm="SBO:0000176" id="R_ICDHyr_REVNo1" name="isocitrate_dehydrogenase__NADP_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FS1" stoichiometry="2.6107e-06" constant="true"/> <speciesReference species="M_pmet_ICDHyr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4012"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICDHyr_REVNo2" sboTerm="SBO:0000176" id="R_ICDHyr_REVNo2" name="isocitrate_dehydrogenase__NADP_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FS2" stoichiometry="2.6107e-06" constant="true"/> <speciesReference species="M_pmet_ICDHyr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4011"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_ICITtex_REV" sboTerm="SBO:0000176" id="R_arm_ICITtex_REV" name="isocitrate_transport__external (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_ICITtex_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICITtex_REVNo1" sboTerm="SBO:0000176" id="R_ICITtex_REVNo1" name="isocitrate_transport__external (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88MZ9" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_ICITtex_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1419"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ICITtex_REVNo2" sboTerm="SBO:0000176" id="R_ICITtex_REVNo2" name="isocitrate_transport__external (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88L77" stoichiometry="9.8503e-07" constant="true"/> <speciesReference species="M_pmet_ICITtex_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ILETA_REVNo1" sboTerm="SBO:0000176" id="R_ILETA_REVNo1" name="isoleucine_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H54" stoichiometry="3.5613e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3511"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_IPDDI_REVNo1" sboTerm="SBO:0000176" id="R_IPDDI_REVNo1" name="isopentenyl_diphosphate_D_isomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_dmpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QC9" stoichiometry="6.2143e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ipdp_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0565"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_ISETACtex_REVNo1" sboTerm="SBO:0000176" id="R_ISETACtex_REVNo1" name="isethionate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_isetac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_isetac_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LALALGLUtex_REVNo1" sboTerm="SBO:0000176" id="R_LALALGLUtex_REVNo1" name="L_alanyl_L_glutamate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_LalaLglu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LDH_D_REVNo1" sboTerm="SBO:0000176" id="R_LDH_D_REVNo1" name="D_lactate_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MC4" stoichiometry="6.9444e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1649"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEULEUtex_REVNo1" sboTerm="SBO:0000176" id="R_LEULEUtex_REVNo1" name="leucylleucine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_leuleu_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_leuleu_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LEUTA_REVNo1" sboTerm="SBO:0000176" id="R_LEUTA_REVNo1" name="leucine_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H54" stoichiometry="3.5613e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3511"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LSERDHr_REVNo1" sboTerm="SBO:0000176" id="R_LSERDHr_REVNo1" name="L_serine_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2amsa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DG3" stoichiometry="4.8225e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4862"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_LYStex_REVNo1" sboTerm="SBO:0000176" id="R_LYStex_REVNo1" name="L_lysine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_lys__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88NK1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_lys__L_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1206"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MAN6PI_REVNo1" sboTerm="SBO:0000176" id="R_MAN6PI_REVNo1" name="mannose_6_phosphate_isomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M00" stoichiometry="1.418e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1776"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MANE_REVNo1" sboTerm="SBO:0000176" id="R_MANE_REVNo1" name="Manose_epimerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88P39" stoichiometry="8.0167e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_man_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1014"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCITL2_REVNo1" sboTerm="SBO:0000176" id="R_MCITL2_REVNo1" name="methylisocitrate_lyase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KF6" stoichiometry="2.6455e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_micit_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2334"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MCOATA_REVNo1" sboTerm="SBO:0000176" id="R_MCOATA_REVNo1" name="Malonyl_CoA_ACP_transacylase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL7" stoichiometry="1.7581e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1913"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MICITDr_REVNo1" sboTerm="SBO:0000176" id="R_MICITDr_REVNo1" name="2_methylisocitrate_dehydratase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_micit_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KF4" stoichiometry="5.2411e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2mcacn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2336"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MSO3tex_REVNo1" sboTerm="SBO:0000176" id="R_MSO3tex_REVNo1" name="methanesulfonate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_mso3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mso3_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_MTI_REV" sboTerm="SBO:0000176" id="R_arm_MTI_REV" name="maltose_trehalose_isomerase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_MTI_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_4059"/> <fbc:geneProductRef fbc:geneProduct="PP_2918"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTI_REVNo1" sboTerm="SBO:0000176" id="R_MTI_REVNo1" name="maltose_trehalose_isomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FN0" stoichiometry="1.2237e-06" constant="true"/> <speciesReference species="M_pmet_MTI_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tre_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4059"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MTI_REVNo2" sboTerm="SBO:0000176" id="R_MTI_REVNo2" name="maltose_trehalose_isomerase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IT1" stoichiometry="1.2237e-06" constant="true"/> <speciesReference species="M_pmet_MTI_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_tre_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2918"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MUCCYCI_REVNo1" sboTerm="SBO:0000176" id="R_MUCCYCI_REVNo1" name="muconate_cycloisomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_mucl_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK6" stoichiometry="3.6743e-10" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ccmuac_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3715"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_MUCLI_REVNo1" sboTerm="SBO:0000176" id="R_MUCLI_REVNo1" name="mucolactone_isomerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88GK7" stoichiometry="1.7541e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_mucl_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3714"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_OIVD1r_REVNo1" sboTerm="SBO:0000176" id="R_OIVD1r_REVNo1" name="2_oxoisovalerate_dehydrogenase__acylating_4_methyl_2_oxopentaoate_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ivcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88EP9" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ0" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ1" stoichiometry="1.9608e-06" constant="true"/> <speciesReference species="M_prot_Q88EQ2" stoichiometry="1.9608e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4401"/> <fbc:geneProductRef fbc:geneProduct="PP_4402"/> <fbc:geneProductRef fbc:geneProduct="PP_4403"/> <fbc:geneProductRef fbc:geneProduct="PP_4404"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PACtex_REVNo1" sboTerm="SBO:0000176" id="R_PACtex_REVNo1" name="Phenylacetic_acid_transport_via_outer_membrane_porin (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HT2" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pac_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3271"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHbr_REVNo1" sboTerm="SBO:0000176" id="R_PDHbr_REVNo1" name="pyruvate_dehydrogenase__dihydrolipoamide__reversible (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QZ6" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_adhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0338"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PDHcr_REV" sboTerm="SBO:0000176" id="R_arm_PDHcr_REV" name="Pyruvate_dehydrogenase__dihydrolipoamide_dehydrogenase__reversible (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PDHcr_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5366"/> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHcr_REVNo1" sboTerm="SBO:0000176" id="R_PDHcr_REVNo1" name="Pyruvate_dehydrogenase__dihydrolipoamide_dehydrogenase__reversible (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C17" stoichiometry="3.1566e-06" constant="true"/> <speciesReference species="M_pmet_PDHcr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5366"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PDHcr_REVNo2" sboTerm="SBO:0000176" id="R_PDHcr_REVNo2" name="Pyruvate_dehydrogenase__dihydrolipoamide_dehydrogenase__reversible (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88FB1" stoichiometry="3.1566e-06" constant="true"/> <speciesReference species="M_pmet_PDHcr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4187"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PENTSOtex_REVNo1" sboTerm="SBO:0000176" id="R_PENTSOtex_REVNo1" name="pentasulfonate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pentso3_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pentso3_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGLCNDH_REVNo1" sboTerm="SBO:0000176" id="R_PGLCNDH_REVNo1" name="phosphogluconate_2_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="2" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HI1" stoichiometry="3.7896e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_6p2dhglcn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PGMT_REV" sboTerm="SBO:0000176" id="R_arm_PGMT_REV" name="phosphoglucomutase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PGMT_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> <fbc:geneProductRef fbc:geneProduct="PP_5288"/> <fbc:geneProductRef fbc:geneProduct="PP_3578"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGMT_REVNo1" sboTerm="SBO:0000176" id="R_PGMT_REVNo1" name="phosphoglucomutase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LZ9" stoichiometry="3.5476e-05" constant="true"/> <speciesReference species="M_pmet_PGMT_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PGMT_REVNo2" sboTerm="SBO:0000176" id="R_PGMT_REVNo2" name="phosphoglucomutase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GY7" stoichiometry="2.924e-06" constant="true"/> <speciesReference species="M_pmet_PGMT_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3578"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PHETA1_REV" sboTerm="SBO:0000176" id="R_arm_PHETA1_REV" name="phenylalanine_transaminase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PHETA1_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHETA1_REVNo1" sboTerm="SBO:0000176" id="R_PHETA1_REVNo1" name="phenylalanine_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="2.1368e-06" constant="true"/> <speciesReference species="M_pmet_PHETA1_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PHETA1_REVNo2" sboTerm="SBO:0000176" id="R_PHETA1_REVNo2" name="phenylalanine_transaminase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX7" stoichiometry="2.1368e-06" constant="true"/> <speciesReference species="M_pmet_PHETA1_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI1_REVNo1" sboTerm="SBO:0000176" id="R_PLCTI1_REVNo1" name="Esterified_fatty_acid_cistrans_isomerase__pe161_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pe161e9_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI2_REVNo1" sboTerm="SBO:0000176" id="R_PLCTI2_REVNo1" name="Esterified_fatty_acid_cistrans_isomerase__pe181_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pe181e11_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pe181_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI3_REVNo1" sboTerm="SBO:0000176" id="R_PLCTI3_REVNo1" name="Esterified_fatty_acid_cistrans_isomerase__pg161_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg161e9_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg161_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI4_REVNo1" sboTerm="SBO:0000176" id="R_PLCTI4_REVNo1" name="Esterified_fatty_acid_cistrans_isomerase__pg181_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pg181e11_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI5_REVNo1" sboTerm="SBO:0000176" id="R_PLCTI5_REVNo1" name="Esterified_fatty_acid_cistrans_isomerase__clpn161_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn161e9_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn161_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PLCTI6_REVNo1" sboTerm="SBO:0000176" id="R_PLCTI6_REVNo1" name="Esterified_fatty_acid_cistrans_isomerase__clpn181_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_clpn181e11_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KB4" stoichiometry="9.2593e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_clpn181_p" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PMANM_REVNo1" sboTerm="SBO:0000176" id="R_PMANM_REVNo1" name="phosphomannomutase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ9" stoichiometry="3.5476e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_PPHNTA_REV" sboTerm="SBO:0000176" id="R_arm_PPHNTA_REV" name="prephenate_transaminase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_PPHNTA_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPHNTA_REVNo1" sboTerm="SBO:0000176" id="R_PPHNTA_REVNo1" name="prephenate_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX7" stoichiometry="4.6296e-06" constant="true"/> <speciesReference species="M_pmet_PPHNTA_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Largn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPHNTA_REVNo2" sboTerm="SBO:0000176" id="R_PPHNTA_REVNo2" name="prephenate_transaminase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="4.6296e-06" constant="true"/> <speciesReference species="M_pmet_PPHNTA_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_Largn_c" stoichiometry="1" constant="true"/> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PPM_REVNo1" sboTerm="SBO:0000176" id="R_PPM_REVNo1" name="phosphopentomutase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LZ9" stoichiometry="3.5476e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1777"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROGLYtex_REVNo1" sboTerm="SBO:0000176" id="R_PROGLYtex_REVNo1" name="L_Prolinylglycine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_progly_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88PG7" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_progly_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0883"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PROtex_REVNo1" sboTerm="SBO:0000176" id="R_PROtex_REVNo1" name="L_proline_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88CD1" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pro__L_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5250"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_PSCVT_REVNo1" sboTerm="SBO:0000176" id="R_PSCVT_REVNo1" name="3_phosphoshikimate_1_carboxyvinyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3psme_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88M05" stoichiometry="5.144e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm5p_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1770"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_QUIDHy_REV" sboTerm="SBO:0000176" id="R_arm_QUIDHy_REV" name="quinate_dehydrogenase__NADP_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_QUIDHy_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUIDHy_REVNo1" sboTerm="SBO:0000176" id="R_QUIDHy_REVNo1" name="quinate_dehydrogenase__NADP_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K85" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_QUIDHy_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_QUIDHy_REVNo2" sboTerm="SBO:0000176" id="R_QUIDHy_REVNo2" name="quinate_dehydrogenase__NADP_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IJ7" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_QUIDHy_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_RDXRr_REV" sboTerm="SBO:0000176" id="R_arm_RDXRr_REV" name="Rubredoxin_oxidoreductase_reversible (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdxr_c" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_RDXRr_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_5371"/> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5315"/> <fbc:geneProductRef fbc:geneProduct="PP_5314"/> </fbc:and> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RDXRr_REVNo1" sboTerm="SBO:0000176" id="R_RDXRr_REVNo1" name="Rubredoxin_oxidoreductase_reversible (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C12" stoichiometry="3.299e-05" constant="true"/> <speciesReference species="M_pmet_RDXRr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdxo_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5371"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RDXRr_REVNo2" sboTerm="SBO:0000176" id="R_RDXRr_REVNo2" name="Rubredoxin_oxidoreductase_reversible (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88C68" stoichiometry="3.299e-05" constant="true"/> <speciesReference species="M_prot_Q88C69" stoichiometry="3.299e-05" constant="true"/> <speciesReference species="M_pmet_RDXRr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> <speciesReference species="M_rdxo_c" stoichiometry="2" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_5315"/> <fbc:geneProductRef fbc:geneProduct="PP_5314"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_REPHACCOAI_REVNo1" sboTerm="SBO:0000176" id="R_REPHACCOAI_REVNo1" name="ring_1_2_epoxyphenylacetyl_CoA_isomerase__oxepin_CoA_forming_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_2oxpaccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88HS0" stoichiometry="9.9562e-09" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_rephaccoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR100_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR100_REVNo1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR101_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR101_REVNo1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R3hdec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odec4coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR120_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR120_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR121d5_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR121d5_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hcddec5ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oddccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR121d6_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR121d6_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hdd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odd6coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR140_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR140_REVNo1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3otdcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR141d5_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR141d5_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3odd5coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR141d7_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR141d7_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hcmrs7ecoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3otdccoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR142_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR142_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3htd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohd58coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR60_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR60_REVNo1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hhcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR70_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR70_REVNo1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hhpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ohpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR80_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR80_REVNo1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3oocoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOAR90_REVNo1" sboTerm="SBO:0000176" id="R_RHACOAR90_REVNo1" name="_3R__3_Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ononacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP100_REVNo1" sboTerm="SBO:0000176" id="R_RHACOARP100_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opdecacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP40_REVNo1" sboTerm="SBO:0000176" id="R_RHACOARP40_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opbcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP50_REVNo1" sboTerm="SBO:0000176" id="R_RHACOARP50_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opptcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP60_REVNo1" sboTerm="SBO:0000176" id="R_RHACOARP60_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hphxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ophxacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP70_REVNo1" sboTerm="SBO:0000176" id="R_RHACOARP70_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hphpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3ophpcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP80_REVNo1" sboTerm="SBO:0000176" id="R_RHACOARP80_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opoctacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOARP90_REVNo1" sboTerm="SBO:0000176" id="R_RHACOARP90_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3hpnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3opnonacoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RHACOART60_REVNo1" sboTerm="SBO:0000176" id="R_RHACOART60_REVNo1" name="_R__Hydroxyacyl_CoANADP_oxidoreductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_R_3h6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LL6" stoichiometry="2.7233e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3o6athcoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1914"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_RPE_REVNo1" sboTerm="SBO:0000176" id="R_RPE_REVNo1" name="ribulose_5_phosphate_3_epimerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88QS3" stoichiometry="3.1928e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0415"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SDPTA_REVNo1" sboTerm="SBO:0000176" id="R_SDPTA_REVNo1" name="succinyldiaminopimelate_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sl2a6o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88MI3" stoichiometry="1.1574e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_sl26da_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1588"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SERAT_REV" sboTerm="SBO:0000176" id="R_arm_SERAT_REV" name="serine_O_acetyltransferase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SERAT_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0840"/> <fbc:geneProductRef fbc:geneProduct="PP_0228"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERAT_REVNo1" sboTerm="SBO:0000176" id="R_SERAT_REVNo1" name="serine_O_acetyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88PL0" stoichiometry="1.3889e-06" constant="true"/> <speciesReference species="M_pmet_SERAT_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0840"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SERAT_REVNo2" sboTerm="SBO:0000176" id="R_SERAT_REVNo2" name="serine_O_acetyltransferase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RA5" stoichiometry="1.3889e-06" constant="true"/> <speciesReference species="M_pmet_SERAT_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0228"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_SHK3Dr_REV" sboTerm="SBO:0000176" id="R_arm_SHK3Dr_REV" name="shikimate_dehydrogenase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_SHK3Dr_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> <fbc:geneProductRef fbc:geneProduct="PP_0074"/> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> <fbc:geneProductRef fbc:geneProduct="PP_3768"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3Dr_REVNo1" sboTerm="SBO:0000176" id="R_SHK3Dr_REVNo1" name="shikimate_dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88IJ7" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_SHK3Dr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3002"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3Dr_REVNo2" sboTerm="SBO:0000176" id="R_SHK3Dr_REVNo2" name="shikimate_dehydrogenase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88RQ5" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_SHK3Dr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0074"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3Dr_REVNo3" sboTerm="SBO:0000176" id="R_SHK3Dr_REVNo3" name="shikimate_dehydrogenase (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88K85" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_SHK3Dr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2406"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SHK3Dr_REVNo4" sboTerm="SBO:0000176" id="R_SHK3Dr_REVNo4" name="shikimate_dehydrogenase (reversible) (No4)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GF6" stoichiometry="9.0481e-07" constant="true"/> <speciesReference species="M_pmet_SHK3Dr_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3768"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SUCD4_REVNo1" sboTerm="SBO:0000176" id="R_SUCD4_REVNo1" name="succinate_dehyrdogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F95" stoichiometry="3.4722e-05" constant="true"/> <speciesReference species="M_prot_Q88F96" stoichiometry="3.4722e-05" constant="true"/> <speciesReference species="M_prot_Q88F97" stoichiometry="3.4722e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="PP_4201"/> <fbc:geneProductRef fbc:geneProduct="PP_4202"/> <fbc:geneProductRef fbc:geneProduct="PP_4203"/> </fbc:and> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SUCOAS_REVNo1" sboTerm="SBO:0000176" id="R_SUCOAS_REVNo1" name="succinyl_CoA_synthetase__ADP_forming_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FB3" stoichiometry="1.2626e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4185"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_SULFACtex_REVNo1" sboTerm="SBO:0000176" id="R_SULFACtex_REVNo1" name="sulfoaceate_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_sulfac_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_sulfac_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TAURtex_REVNo1" sboTerm="SBO:0000176" id="R_TAURtex_REVNo1" name="taurine_transport_via_diffusion__extracellular_to_periplasm_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_taur_p" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R99" stoichiometry="9.8503e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_taur_e" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0234"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRA2r_REVNo1" sboTerm="SBO:0000176" id="R_THRA2r_REVNo1" name="L_allo_Threonine_Aldolase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R13" stoichiometry="7.8247e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_athr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0321"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_THRAr_REVNo1" sboTerm="SBO:0000176" id="R_THRAr_REVNo1" name="Threonine_Aldolase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/> <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88R13" stoichiometry="7.8247e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0321"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TKT1_REVNo1" sboTerm="SBO:0000176" id="R_TKT1_REVNo1" name="transketolase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_s7p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D62" stoichiometry="2.2806e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4965"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TKT2_REVNo1" sboTerm="SBO:0000176" id="R_TKT2_REVNo1" name="transketolase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88D62" stoichiometry="2.2806e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_e4p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4965"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TRSARr_REVNo1" sboTerm="SBO:0000176" id="R_TRSARr_REVNo1" name="tartronate_semialdehyde_reductase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88F01" stoichiometry="1.1431e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_2h3oppan_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4299"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_TYRTA_REV" sboTerm="SBO:0000176" id="R_arm_TYRTA_REV" name="tyrosine_transaminase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_TYRTA_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TYRTA_REVNo1" sboTerm="SBO:0000176" id="R_TYRTA_REVNo1" name="tyrosine_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LG1" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_TYRTA_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1972"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_TYRTA_REVNo2" sboTerm="SBO:0000176" id="R_TYRTA_REVNo2" name="tyrosine_transaminase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88GX7" stoichiometry="0.001634" constant="true"/> <speciesReference species="M_pmet_TYRTA_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3590"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UAG2E_REVNo1" sboTerm="SBO:0000176" id="R_UAG2E_REVNo1" name="UDP_N_acetylglucosamine_2_epimerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_uacmam_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88LW6" stoichiometry="3.5162e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1811"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_UDPG4E_REV" sboTerm="SBO:0000176" id="R_arm_UDPG4E_REV" name="UDPglucose_4_epimerase (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_UDPG4E_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_3129"/> <fbc:geneProductRef fbc:geneProduct="PP_0551"/> <fbc:geneProductRef fbc:geneProduct="PP_1803"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDPG4E_REVNo1" sboTerm="SBO:0000176" id="R_UDPG4E_REVNo1" name="UDPglucose_4_epimerase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88I72" stoichiometry="2.2325e-07" constant="true"/> <speciesReference species="M_pmet_UDPG4E_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3129"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDPG4E_REVNo2" sboTerm="SBO:0000176" id="R_UDPG4E_REVNo2" name="UDPglucose_4_epimerase (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88QE3" stoichiometry="2.2325e-07" constant="true"/> <speciesReference species="M_pmet_UDPG4E_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0551"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_UDPG4E_REVNo3" sboTerm="SBO:0000176" id="R_UDPG4E_REVNo3" name="UDPglucose_4_epimerase (reversible) (No3)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LX4" stoichiometry="2.2325e-07" constant="true"/> <speciesReference species="M_pmet_UDPG4E_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VALTA_REVNo1" sboTerm="SBO:0000176" id="R_VALTA_REVNo1" name="valine_transaminase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/> <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88H54" stoichiometry="3.5613e-06" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3511"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_VCOAD_REV" sboTerm="SBO:0000176" id="R_arm_VCOAD_REV" name="acyl_CoA_dehydrogenase__pentanoyl_CoA_ (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pt2coa_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_VCOAD_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VCOAD_REVNo1" sboTerm="SBO:0000176" id="R_VCOAD_REVNo1" name="acyl_CoA_dehydrogenase__pentanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88LN6" stoichiometry="7.7809e-06" constant="true"/> <speciesReference species="M_pmet_VCOAD_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1893"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VCOAD_REVNo2" sboTerm="SBO:0000176" id="R_VCOAD_REVNo2" name="acyl_CoA_dehydrogenase__pentanoyl_CoA_ (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_prot_Q88KS3" stoichiometry="3.2527e-06" constant="true"/> <speciesReference species="M_pmet_VCOAD_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/> <speciesReference species="M_ptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2216"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_VECOAH_REVNo1" sboTerm="SBO:0000176" id="R_VECOAH_REVNo1" name="3_hydroxyacyl_CoA_dehydratase__3_hydroxypentanoyl_CoA_ (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB8N999999"> <listOfReactants> <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pt2coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88KS2" stoichiometry="1.462e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_3hptcoa_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2217"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_13PPDH2_REVNo1" sboTerm="SBO:0000176" id="R_13PPDH2_REVNo1" name="1,3-propanediol dehydrogenase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_13ppd_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88K01" stoichiometry="6.1728e-05" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_lald__L_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_2492"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_AMALT1_REVNo1" sboTerm="SBO:0000176" id="R_AMALT1_REVNo1" name="Amylomaltase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/> <speciesReference species="M_maltttr_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88FN7" stoichiometry="6.5359e-07" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/> <speciesReference species="M_malttr_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4052"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_arm_GAPDi_nadp_REV" sboTerm="SBO:0000176" id="R_arm_GAPDi_nadp_REV" name="Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) (reversible) (arm)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_13dpg_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_pmet_GAPDi_nadp_REV" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="PP_0665"/> <fbc:geneProductRef fbc:geneProduct="PP_3443"/> </fbc:or> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPDi_nadp_REVNo1" sboTerm="SBO:0000176" id="R_GAPDi_nadp_REVNo1" name="Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88Q33" stoichiometry="1.6804e-06" constant="true"/> <speciesReference species="M_pmet_GAPDi_nadp_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0665"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_GAPDi_nadp_REVNo2" sboTerm="SBO:0000176" id="R_GAPDi_nadp_REVNo2" name="Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) (reversible) (No2)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_prot_Q88HB7" stoichiometry="1.6804e-06" constant="true"/> <speciesReference species="M_pmet_GAPDi_nadp_REV" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/> <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/> <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3443"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_METNA_REVNo1" sboTerm="SBO:0000176" id="R_METNA_REVNo1" name="L-amino acid N-acyltransferase (reversible) (No1)" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfReactants> <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_h_c" stoichiometry="1" constant="true"/> <speciesReference species="M_acmet_c" stoichiometry="1" constant="true"/> <speciesReference species="M_prot_Q88DH9" stoichiometry="0.00011574" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/> <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4846"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FVX4_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FVX4_exchange" name="prot_A0A140FVX4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FVX4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0156"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FVZ1_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FVZ1_exchange" name="prot_A0A140FVZ1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FVZ1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0489"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FWH9_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FWH9_exchange" name="prot_A0A140FWH9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FWH9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3723"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FWK2_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FWK2_exchange" name="prot_A0A140FWK2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FWK2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4036"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FWL0_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FWL0_exchange" name="prot_A0A140FWL0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FWL0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4140"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FWL1_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FWL1_exchange" name="prot_A0A140FWL1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FWL1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4160"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FWS3_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FWS3_exchange" name="prot_A0A140FWS3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FWS3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4976"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_A0A140FWS4_exchange" sboTerm="SBO:0000176" id="R_prot_A0A140FWS4_exchange" name="prot_A0A140FWS4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_A0A140FWS4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5013"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q877U6_exchange" sboTerm="SBO:0000176" id="R_prot_Q877U6_exchange" name="prot_Q877U6_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q877U6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_1157"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88C03_exchange" sboTerm="SBO:0000176" id="R_prot_Q88C03_exchange" name="prot_Q88C03_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88C03" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5380"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88C12_exchange" sboTerm="SBO:0000176" id="R_prot_Q88C12_exchange" name="prot_Q88C12_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88C12" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5371"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88C17_exchange" sboTerm="SBO:0000176" id="R_prot_Q88C17_exchange" name="prot_Q88C17_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88C17" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5366"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88C18_exchange" sboTerm="SBO:0000176" id="R_prot_Q88C18_exchange" name="prot_Q88C18_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88C18" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5365"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88C32_exchange" sboTerm="SBO:0000176" id="R_prot_Q88C32_exchange" name="prot_Q88C32_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88C32" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_5351"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88C36_exchange" sboTerm="SBO:0000176" id="R_prot_Q88C36_exchange" name="prot_Q88C36_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88C36" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef 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stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4999"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88D31_exchange" sboTerm="SBO:0000176" id="R_prot_Q88D31_exchange" name="prot_Q88D31_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88D31" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4997"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88D44_exchange" sboTerm="SBO:0000176" id="R_prot_Q88D44_exchange" name="prot_Q88D44_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88D44" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef 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sboTerm="SBO:0000176" id="R_prot_Q88D62_exchange" name="prot_Q88D62_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88D62" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4965"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88D63_exchange" sboTerm="SBO:0000176" id="R_prot_Q88D63_exchange" name="prot_Q88D63_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88D63" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4964"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88D67_exchange" sboTerm="SBO:0000176" id="R_prot_Q88D67_exchange" name="prot_Q88D67_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88D67" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4960"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88D80_exchange" sboTerm="SBO:0000176" id="R_prot_Q88D80_exchange" name="prot_Q88D80_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88D80" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4947"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88D99_exchange" sboTerm="SBO:0000176" id="R_prot_Q88D99_exchange" name="prot_Q88D99_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88D99" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4928"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DA8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DA8_exchange" name="prot_Q88DA8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DA8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4919"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DB8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DB8_exchange" name="prot_Q88DB8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DB8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef 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sboTerm="SBO:0000176" id="R_prot_Q88DD0_exchange" name="prot_Q88DD0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DD0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4897"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DG3_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DG3_exchange" name="prot_Q88DG3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DG3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4862"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DH9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DH9_exchange" name="prot_Q88DH9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DH9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4846"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DJ5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DJ5_exchange" name="prot_Q88DJ5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DJ5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4830"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DJ6_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DJ6_exchange" name="prot_Q88DJ6_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DJ6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4829"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DJ7_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DJ7_exchange" name="prot_Q88DJ7_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DJ7" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4828"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DJ8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DJ8_exchange" name="prot_Q88DJ8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DJ8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4827"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DL8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DL8_exchange" name="prot_Q88DL8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DL8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4807"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DM0_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DM0_exchange" name="prot_Q88DM0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DM0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4805"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DM2_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DM2_exchange" name="prot_Q88DM2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DM2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4803"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DP5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DP5_exchange" name="prot_Q88DP5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DP5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4779"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DR6_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DR6_exchange" name="prot_Q88DR6_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DR6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4757"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DT2_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DT2_exchange" name="prot_Q88DT2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DT2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4737"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DV2_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DV2_exchange" name="prot_Q88DV2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DV2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4717"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DX0_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DX0_exchange" name="prot_Q88DX0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DX0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4698"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DY5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DY5_exchange" name="prot_Q88DY5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DY5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4683"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DY8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DY8_exchange" name="prot_Q88DY8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DY8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4680"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DY9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DY9_exchange" name="prot_Q88DY9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DY9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4679"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DZ1_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DZ1_exchange" name="prot_Q88DZ1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DZ1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4677"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88DZ8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88DZ8_exchange" name="prot_Q88DZ8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88DZ8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4670"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88E01_exchange" sboTerm="SBO:0000176" id="R_prot_Q88E01_exchange" name="prot_Q88E01_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88E01" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4667"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88E02_exchange" sboTerm="SBO:0000176" id="R_prot_Q88E02_exchange" name="prot_Q88E02_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88E02" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4666"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88E09_exchange" sboTerm="SBO:0000176" id="R_prot_Q88E09_exchange" name="prot_Q88E09_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88E09" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4659"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88E12_exchange" sboTerm="SBO:0000176" id="R_prot_Q88E12_exchange" name="prot_Q88E12_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88E12" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4656"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88E13_exchange" sboTerm="SBO:0000176" id="R_prot_Q88E13_exchange" name="prot_Q88E13_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88E13" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef 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sboTerm="SBO:0000176" id="R_prot_Q88E36_exchange" name="prot_Q88E36_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88E36" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4632"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88E40_exchange" sboTerm="SBO:0000176" id="R_prot_Q88E40_exchange" name="prot_Q88E40_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88E40" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_4628"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88E48_exchange" sboTerm="SBO:0000176" id="R_prot_Q88E48_exchange" name="prot_Q88E48_exchange" reversible="false" fast="false" 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stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3511"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88H58_exchange" sboTerm="SBO:0000176" id="R_prot_Q88H58_exchange" name="prot_Q88H58_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88H58" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3507"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88H96_exchange" sboTerm="SBO:0000176" id="R_prot_Q88H96_exchange" name="prot_Q88H96_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88H96" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3464"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88H97_exchange" sboTerm="SBO:0000176" id="R_prot_Q88H97_exchange" name="prot_Q88H97_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88H97" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3463"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88H99_exchange" sboTerm="SBO:0000176" id="R_prot_Q88H99_exchange" name="prot_Q88H99_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88H99" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3461"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HA1_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HA1_exchange" name="prot_Q88HA1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HA1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3459"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HB4_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HB4_exchange" name="prot_Q88HB4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HB4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3446"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HB7_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HB7_exchange" name="prot_Q88HB7_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HB7" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3443"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HC5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HC5_exchange" name="prot_Q88HC5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HC5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3435"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HC7_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HC7_exchange" name="prot_Q88HC7_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HC7" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3433"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HE4_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HE4_exchange" name="prot_Q88HE4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HE4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3416"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HF0_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HF0_exchange" name="prot_Q88HF0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HF0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3410"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HH4_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HH4_exchange" name="prot_Q88HH4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HH4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3384"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HH5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HH5_exchange" name="prot_Q88HH5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HH5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3383"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HH6_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HH6_exchange" name="prot_Q88HH6_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HH6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3382"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HH9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HH9_exchange" name="prot_Q88HH9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HH9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3378"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HI1_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HI1_exchange" name="prot_Q88HI1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HI1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3376"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HJ8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HJ8_exchange" name="prot_Q88HJ8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HJ8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3358"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HJ9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HJ9_exchange" name="prot_Q88HJ9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HJ9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3357"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HK0_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HK0_exchange" name="prot_Q88HK0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HK0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3356"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HL2_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HL2_exchange" name="prot_Q88HL2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HL2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3344"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HL3_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HL3_exchange" name="prot_Q88HL3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HL3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3343"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HL4_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HL4_exchange" name="prot_Q88HL4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HL4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3342"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HN1_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HN1_exchange" name="prot_Q88HN1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HN1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3322"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HQ0_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HQ0_exchange" name="prot_Q88HQ0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HQ0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3303"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HR9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HR9_exchange" name="prot_Q88HR9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HR9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3284"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS0_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS0_exchange" name="prot_Q88HS0_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS0" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3283"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS1_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS1_exchange" name="prot_Q88HS1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3282"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS3_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS3_exchange" name="prot_Q88HS3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3280"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS4_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS4_exchange" name="prot_Q88HS4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3279"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS5_exchange" name="prot_Q88HS5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3278"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS6_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS6_exchange" name="prot_Q88HS6_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3277"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS7_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS7_exchange" name="prot_Q88HS7_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS7" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3276"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS8_exchange" name="prot_Q88HS8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3275"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HS9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HS9_exchange" name="prot_Q88HS9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HS9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3274"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HT2_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HT2_exchange" name="prot_Q88HT2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HT2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3271"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HT3_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HT3_exchange" name="prot_Q88HT3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HT3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3270"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88HT9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88HT9_exchange" name="prot_Q88HT9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88HT9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3264"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88I12_exchange" sboTerm="SBO:0000176" id="R_prot_Q88I12_exchange" name="prot_Q88I12_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88I12" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3190"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88I13_exchange" sboTerm="SBO:0000176" id="R_prot_Q88I13_exchange" name="prot_Q88I13_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88I13" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3189"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88I24_exchange" sboTerm="SBO:0000176" id="R_prot_Q88I24_exchange" name="prot_Q88I24_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88I24" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3178"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88I29_exchange" sboTerm="SBO:0000176" id="R_prot_Q88I29_exchange" name="prot_Q88I29_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88I29" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3173"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88I35_exchange" sboTerm="SBO:0000176" id="R_prot_Q88I35_exchange" name="prot_Q88I35_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88I35" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_3166"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88I37_exchange" sboTerm="SBO:0000176" id="R_prot_Q88I37_exchange" name="prot_Q88I37_exchange" reversible="false" fast="false" 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sboTerm="SBO:0000176" id="R_prot_Q88RL4_exchange" name="prot_Q88RL4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RL4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0115"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RM3_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RM3_exchange" name="prot_Q88RM3_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RM3" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0106"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RM4_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RM4_exchange" name="prot_Q88RM4_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RM4" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0105"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RM5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RM5_exchange" name="prot_Q88RM5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RM5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0104"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RM6_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RM6_exchange" name="prot_Q88RM6_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RM6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0103"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RM9_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RM9_exchange" name="prot_Q88RM9_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RM9" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0100"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RQ2_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RQ2_exchange" name="prot_Q88RQ2_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RQ2" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0077"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RQ5_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RQ5_exchange" name="prot_Q88RQ5_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RQ5" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0074"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RQ7_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RQ7_exchange" name="prot_Q88RQ7_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RQ7" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0072"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RR6_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RR6_exchange" name="prot_Q88RR6_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RR6" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0063"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RS1_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RS1_exchange" name="prot_Q88RS1_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RS1" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0058"/> </fbc:geneProductAssociation> </reaction> <reaction metaid="R_prot_Q88RT8_exchange" sboTerm="SBO:0000176" id="R_prot_Q88RT8_exchange" name="prot_Q88RT8_exchange" reversible="false" fast="false" fbc:lowerFluxBound="FB1N0" fbc:upperFluxBound="FB9NInf"> <listOfProducts> <speciesReference species="M_prot_Q88RT8" stoichiometry="1" constant="true"/> </listOfProducts> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="PP_0041"/> </fbc:geneProductAssociation> </reaction> </listOfReactions> <fbc:listOfObjectives fbc:activeObjective="obj"> <fbc:objective fbc:id="obj" fbc:type="maximize"> <fbc:listOfFluxObjectives> <fbc:fluxObjective fbc:reaction="R_BiomassKT2440_WT3" fbc:coefficient="1"/> </fbc:listOfFluxObjectives> </fbc:objective> </fbc:listOfObjectives> <fbc:listOfGeneProducts> <fbc:geneProduct metaid="PP_s0001" sboTerm="SBO:0000243" fbc:id="PP_s0001" fbc:label="PP_s0001"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_s0001"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_s0001"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3591" sboTerm="SBO:0000243" fbc:id="PP_3591" fbc:label="PP_3591"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3591"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3591"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745727.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1257" sboTerm="SBO:0000243" fbc:id="PP_1257" fbc:label="PP_1257"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1257"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1257"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743417.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NF4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2136" sboTerm="SBO:0000243" fbc:id="PP_2136" fbc:label="PP_2136"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2136"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2136"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744285.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L02"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2008" sboTerm="SBO:0000243" fbc:id="PP_2008" fbc:label="PP_2008"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2008"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2008"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744158.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LC7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1700" sboTerm="SBO:0000243" fbc:id="PP_1700" fbc:label="PP_1700"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1700"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1700"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743857.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M74"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3378" sboTerm="SBO:0000243" fbc:id="PP_3378" fbc:label="PP_3378"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3378"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3378"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745518.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HH9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3377" sboTerm="SBO:0000243" fbc:id="PP_3377" fbc:label="PP_3377"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3377"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3377"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745517.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3433" sboTerm="SBO:0000243" fbc:id="PP_3433" fbc:label="PP_3433"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3433"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3433"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745571.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HC7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0596" sboTerm="SBO:0000243" fbc:id="PP_0596" fbc:label="PP_0596"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0596"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0596"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742759.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q98"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1408" sboTerm="SBO:0000243" fbc:id="PP_1408" fbc:label="PP_1408"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1408"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1408"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743567.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/O85207"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1602" sboTerm="SBO:0000243" fbc:id="PP_1602" fbc:label="PP_1602"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1602"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1602"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743759.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MG9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4174" sboTerm="SBO:0000243" fbc:id="PP_4174" fbc:label="PP_4174"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4174"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4174"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746291.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FC4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4817" sboTerm="SBO:0000243" fbc:id="PP_4817" fbc:label="PP_4817"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4817"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4817"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746922.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DK8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2552" sboTerm="SBO:0000243" fbc:id="PP_2552" fbc:label="PP_2552"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2552"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2552"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744697.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JU5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_128" sboTerm="SBO:0000243" fbc:id="pWW0_128" fbc:label="pWW0_128"/> <fbc:geneProduct metaid="pWW0_131" sboTerm="SBO:0000243" fbc:id="pWW0_131" fbc:label="pWW0_131"/> <fbc:geneProduct metaid="pWW0_097" sboTerm="SBO:0000243" fbc:id="pWW0_097" fbc:label="pWW0_097"/> <fbc:geneProduct metaid="PP_3952" sboTerm="SBO:0000243" fbc:id="PP_3952" fbc:label="PP_3952"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3952"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3952"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746082.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A101"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3951" sboTerm="SBO:0000243" fbc:id="PP_3951" fbc:label="PP_3951"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3951"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3951"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746081.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FX5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1914" sboTerm="SBO:0000243" fbc:id="PP_1914" fbc:label="PP_1914"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1914"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1914"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744068.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LL6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3303" sboTerm="SBO:0000243" fbc:id="PP_3303" fbc:label="PP_3303"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3303"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3303"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745446.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HQ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1916" sboTerm="SBO:0000243" fbc:id="PP_1916" fbc:label="PP_1916"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1916"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1916"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744070.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LL4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4175" sboTerm="SBO:0000243" fbc:id="PP_4175" fbc:label="PP_4175"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4175"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4175"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746292.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FC3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3280" sboTerm="SBO:0000243" fbc:id="PP_3280" fbc:label="PP_3280"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3280"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3280"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745423.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1377" sboTerm="SBO:0000243" fbc:id="PP_1377" fbc:label="PP_1377"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1377"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1377"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743536.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N39"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1378" sboTerm="SBO:0000243" fbc:id="PP_1378" fbc:label="PP_1378"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1378"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1378"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743537.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N38"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1376" sboTerm="SBO:0000243" fbc:id="PP_1376" fbc:label="PP_1376"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1376"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1376"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743535.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1382" sboTerm="SBO:0000243" fbc:id="PP_1382" fbc:label="PP_1382"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1382"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1382"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743541.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N34"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3817" sboTerm="SBO:0000243" fbc:id="PP_3817" fbc:label="PP_3817"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3817"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3817"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745947.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GA7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3816" sboTerm="SBO:0000243" fbc:id="PP_3816" fbc:label="PP_3816"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3816"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3816"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745946.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GA8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3814" sboTerm="SBO:0000243" fbc:id="PP_3814" fbc:label="PP_3814"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3814"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3814"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745944.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GB0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3815" sboTerm="SBO:0000243" fbc:id="PP_3815" fbc:label="PP_3815"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3815"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3815"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745945.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GA9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3356" sboTerm="SBO:0000243" fbc:id="PP_3356" fbc:label="PP_3356"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3356"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3356"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745496.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HK0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3648" sboTerm="SBO:0000243" fbc:id="PP_3648" fbc:label="PP_3648"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3648"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3648"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745784.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GS0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1381" sboTerm="SBO:0000243" fbc:id="PP_1381" fbc:label="PP_1381"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1381"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1381"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743540.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N35"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3537" sboTerm="SBO:0000243" fbc:id="PP_3537" fbc:label="PP_3537"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3537"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3537"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745674.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H28"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1383" sboTerm="SBO:0000243" fbc:id="PP_1383" fbc:label="PP_1383"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1383"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1383"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743542.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N33"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1255" sboTerm="SBO:0000243" fbc:id="PP_1255" fbc:label="PP_1255"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1255"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1255"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743415.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NF6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1259" sboTerm="SBO:0000243" fbc:id="PP_1259" fbc:label="PP_1259"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1259"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1259"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743419.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NF2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1258" sboTerm="SBO:0000243" fbc:id="PP_1258" fbc:label="PP_1258"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1258"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1258"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743418.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NF3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1471" sboTerm="SBO:0000243" fbc:id="PP_1471" fbc:label="PP_1471"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1471"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1471"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743629.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MU7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0662" sboTerm="SBO:0000243" fbc:id="PP_0662" fbc:label="PP_0662"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0662"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0662"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742823.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q36"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_091" sboTerm="SBO:0000243" fbc:id="pWW0_091" fbc:label="pWW0_091"/> <fbc:geneProduct metaid="PP_2504" sboTerm="SBO:0000243" fbc:id="PP_2504" fbc:label="PP_2504"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2504"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2504"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744652.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JY9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_090" sboTerm="SBO:0000243" fbc:id="pWW0_090" fbc:label="pWW0_090"/> <fbc:geneProduct metaid="PP_4799" sboTerm="SBO:0000243" fbc:id="PP_4799" fbc:label="PP_4799"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4799"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4799"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746904.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1141" sboTerm="SBO:0000243" fbc:id="PP_1141" fbc:label="PP_1141"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1141"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743302.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NR4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1138" sboTerm="SBO:0000243" fbc:id="PP_1138" fbc:label="PP_1138"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1138"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1138"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743299.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NR7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1140" sboTerm="SBO:0000243" fbc:id="PP_1140" fbc:label="PP_1140"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1140"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743301.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NR5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1137" sboTerm="SBO:0000243" fbc:id="PP_1137" fbc:label="PP_1137"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1137"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1137"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743298.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NR8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1139" sboTerm="SBO:0000243" fbc:id="PP_1139" fbc:label="PP_1139"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1139"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1139"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743300.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NR6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3599" sboTerm="SBO:0000243" fbc:id="PP_3599" fbc:label="PP_3599"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3599"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3599"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745735.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GW8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1689" sboTerm="SBO:0000243" fbc:id="PP_1689" fbc:label="PP_1689"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1689"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1689"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743846.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M85"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3944" sboTerm="SBO:0000243" fbc:id="PP_3944" fbc:label="PP_3944"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3944"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3944"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746074.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FY2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3940" sboTerm="SBO:0000243" fbc:id="PP_3940" fbc:label="PP_3940"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3940"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3940"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746070.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FY6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3939" sboTerm="SBO:0000243" fbc:id="PP_3939" fbc:label="PP_3939"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3939"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3939"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746069.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FY7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0957" sboTerm="SBO:0000243" fbc:id="PP_0957" fbc:label="PP_0957"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0957"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0957"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743118.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1806" sboTerm="SBO:0000243" fbc:id="PP_1806" fbc:label="PP_1806"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1806"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1806"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743961.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4423" sboTerm="SBO:0000243" fbc:id="PP_4423" fbc:label="PP_4423"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4423"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4423"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746536.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EN1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3071" sboTerm="SBO:0000243" fbc:id="PP_3071" fbc:label="PP_3071"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3071"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3071"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745215.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IC8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5258" sboTerm="SBO:0000243" fbc:id="PP_5258" fbc:label="PP_5258"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5258"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5258"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747359.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CC3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4108" sboTerm="SBO:0000243" fbc:id="PP_4108" fbc:label="PP_4108"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4108"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4108"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746228.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FI7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0214" sboTerm="SBO:0000243" fbc:id="PP_0214" fbc:label="PP_0214"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0214"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0214"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742382.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RB9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2801" sboTerm="SBO:0000243" fbc:id="PP_2801" fbc:label="PP_2801"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2801"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2801"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744945.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J48"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1481" sboTerm="SBO:0000243" fbc:id="PP_1481" fbc:label="PP_1481"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1481"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1481"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743639.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MT7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5278" sboTerm="SBO:0000243" fbc:id="PP_5278" fbc:label="PP_5278"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5278"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5278"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747379.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CA3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4756" sboTerm="SBO:0000243" fbc:id="PP_4756" fbc:label="PP_4756"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4756"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4756"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746862.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DR7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4106" sboTerm="SBO:0000243" fbc:id="PP_4106" fbc:label="PP_4106"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4106"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4106"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746226.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FI9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2911" sboTerm="SBO:0000243" fbc:id="PP_2911" fbc:label="PP_2911"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2911"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2911"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745055.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IT8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2543" sboTerm="SBO:0000243" fbc:id="PP_2543" fbc:label="PP_2543"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2543"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2543"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744688.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3754" sboTerm="SBO:0000243" fbc:id="PP_3754" fbc:label="PP_3754"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3754"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3754"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745884.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GH0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4636" sboTerm="SBO:0000243" fbc:id="PP_4636" fbc:label="PP_4636"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4636"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4636"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746745.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E32"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2051" sboTerm="SBO:0000243" fbc:id="PP_2051" fbc:label="PP_2051"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2051"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2051"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744201.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L84"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3124" sboTerm="SBO:0000243" fbc:id="PP_3124" fbc:label="PP_3124"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3124"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3124"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745268.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I77"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_093" sboTerm="SBO:0000243" fbc:id="pWW0_093" fbc:label="pWW0_093"/> <fbc:geneProduct metaid="PP_1678" sboTerm="SBO:0000243" fbc:id="PP_1678" fbc:label="PP_1678"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1678"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1678"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743835.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0558" sboTerm="SBO:0000243" fbc:id="PP_0558" fbc:label="PP_0558"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0558"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0558"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742721.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QD6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0559" sboTerm="SBO:0000243" fbc:id="PP_0559" fbc:label="PP_0559"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0559"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0559"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742722.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QD5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1607" sboTerm="SBO:0000243" fbc:id="PP_1607" fbc:label="PP_1607"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1607"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1607"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743764.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MG4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1996" sboTerm="SBO:0000243" fbc:id="PP_1996" fbc:label="PP_1996"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1996"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1996"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744146.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LD9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1804" sboTerm="SBO:0000243" fbc:id="PP_1804" fbc:label="PP_1804"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1804"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1804"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743959.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5289" sboTerm="SBO:0000243" fbc:id="PP_5289" fbc:label="PP_5289"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5289"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5289"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747390.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59300"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5185" sboTerm="SBO:0000243" fbc:id="PP_5185" fbc:label="PP_5185"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5185"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5185"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747286.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A0Z9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4679" sboTerm="SBO:0000243" fbc:id="PP_4679" fbc:label="PP_4679"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4679"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4679"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746788.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DY9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4680" sboTerm="SBO:0000243" fbc:id="PP_4680" fbc:label="PP_4680"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4680"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4680"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746789.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DY8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3365" sboTerm="SBO:0000243" fbc:id="PP_3365" fbc:label="PP_3365"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3365"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3365"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743318.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q877U6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1157" sboTerm="SBO:0000243" fbc:id="PP_1157" fbc:label="PP_1157"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1157"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1157"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743318.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q877U6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1893" sboTerm="SBO:0000243" fbc:id="PP_1893" fbc:label="PP_1893"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1893"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1893"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744048.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LN6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2216" sboTerm="SBO:0000243" fbc:id="PP_2216" fbc:label="PP_2216"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2216"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2216"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744365.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KS3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2048" sboTerm="SBO:0000243" fbc:id="PP_2048" fbc:label="PP_2048"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2048"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2048"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744198.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L87"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1915" sboTerm="SBO:0000243" fbc:id="PP_1915" fbc:label="PP_1915"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1915"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1915"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744069.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LL5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5186" sboTerm="SBO:0000243" fbc:id="PP_5186" fbc:label="PP_5186"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5186"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5186"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747287.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CJ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1346" sboTerm="SBO:0000243" fbc:id="PP_1346" fbc:label="PP_1346"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1346"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1346"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743505.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59612"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1418" sboTerm="SBO:0000243" fbc:id="PP_1418" fbc:label="PP_1418"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1418"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1418"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743576.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N00"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1416" sboTerm="SBO:0000243" fbc:id="PP_1416" fbc:label="PP_1416"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1416"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1416"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743574.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N02"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1417" sboTerm="SBO:0000243" fbc:id="PP_1417" fbc:label="PP_1417"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1417"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1417"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743575.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N01"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2058" sboTerm="SBO:0000243" fbc:id="PP_2058" fbc:label="PP_2058"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2058"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2058"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744208.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L77"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1419" sboTerm="SBO:0000243" fbc:id="PP_1419" fbc:label="PP_1419"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1419"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1419"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743577.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MZ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2545" sboTerm="SBO:0000243" fbc:id="PP_2545" fbc:label="PP_2545"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2545"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2545"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744690.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JV2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2112" sboTerm="SBO:0000243" fbc:id="PP_2112" fbc:label="PP_2112"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2112"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2112"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744261.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L24"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2339" sboTerm="SBO:0000243" fbc:id="PP_2339" fbc:label="PP_2339"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2339"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2339"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744488.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KF1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4481" sboTerm="SBO:0000243" fbc:id="PP_4481" fbc:label="PP_4481"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4481"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4481"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746592.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59319"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1912" sboTerm="SBO:0000243" fbc:id="PP_1912" fbc:label="PP_1912"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1912"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1912"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744066.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LL8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1183" sboTerm="SBO:0000243" fbc:id="PP_1183" fbc:label="PP_1183"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1183"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1183"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743343.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NM4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4702" sboTerm="SBO:0000243" fbc:id="PP_4702" fbc:label="PP_4702"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4702"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4702"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746811.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DW6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4487" sboTerm="SBO:0000243" fbc:id="PP_4487" fbc:label="PP_4487"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4487"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4487"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746598.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EH6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2351" sboTerm="SBO:0000243" fbc:id="PP_2351" fbc:label="PP_2351"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2351"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2351"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744500.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KD9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2872" sboTerm="SBO:0000243" fbc:id="PP_2872" fbc:label="PP_2872"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2872"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2872"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745016.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IX7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0763" sboTerm="SBO:0000243" fbc:id="PP_0763" fbc:label="PP_0763"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0763"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0763"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742924.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PT5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4549" sboTerm="SBO:0000243" fbc:id="PP_4549" fbc:label="PP_4549"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4549"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4549"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746658.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EB7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4550" sboTerm="SBO:0000243" fbc:id="PP_4550" fbc:label="PP_4550"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4550"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4550"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746659.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EB6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0553" sboTerm="SBO:0000243" fbc:id="PP_0553" fbc:label="PP_0553"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0553"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0553"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742716.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QE1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0554" sboTerm="SBO:0000243" fbc:id="PP_0554" fbc:label="PP_0554"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0554"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0554"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742717.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QE0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0555" sboTerm="SBO:0000243" fbc:id="PP_0555" fbc:label="PP_0555"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0555"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0555"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742718.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QD9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0556" sboTerm="SBO:0000243" fbc:id="PP_0556" fbc:label="PP_0556"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0556"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0556"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742719.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QD8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1743" sboTerm="SBO:0000243" fbc:id="PP_1743" fbc:label="PP_1743"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1743"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1743"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743899.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M32"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1188" sboTerm="SBO:0000243" fbc:id="PP_1188" fbc:label="PP_1188"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1188"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1188"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743348.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NL9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0591" sboTerm="SBO:0000243" fbc:id="PP_0591" fbc:label="PP_0591"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0591"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0591"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742754.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QA3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1917" sboTerm="SBO:0000243" fbc:id="PP_1917" fbc:label="PP_1917"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1917"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1917"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744071.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LL3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1675" sboTerm="SBO:0000243" fbc:id="PP_1675" fbc:label="PP_1675"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1675"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1675"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743832.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M99"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1676" sboTerm="SBO:0000243" fbc:id="PP_1676" fbc:label="PP_1676"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1676"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1676"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743833.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M98"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2329" sboTerm="SBO:0000243" fbc:id="PP_2329" fbc:label="PP_2329"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2329"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2329"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744478.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KG1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1677" sboTerm="SBO:0000243" fbc:id="PP_1677" fbc:label="PP_1677"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1677"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1677"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743834.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M97"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4653" sboTerm="SBO:0000243" fbc:id="PP_4653" fbc:label="PP_4653"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4653"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4653"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746762.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E15"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1506" sboTerm="SBO:0000243" fbc:id="PP_1506" fbc:label="PP_1506"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1506"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1506"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743663.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A136"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5222" sboTerm="SBO:0000243" fbc:id="PP_5222" fbc:label="PP_5222"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5222"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5222"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747323.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CF9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2460" sboTerm="SBO:0000243" fbc:id="PP_2460" fbc:label="PP_2460"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2460"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2460"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744608.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K32"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4293" sboTerm="SBO:0000243" fbc:id="PP_4293" fbc:label="PP_4293"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4293"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4293"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746409.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F07"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4291" sboTerm="SBO:0000243" fbc:id="PP_4291" fbc:label="PP_4291"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4291"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4291"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746407.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F09"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1681" sboTerm="SBO:0000243" fbc:id="PP_1681" fbc:label="PP_1681"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1681"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1681"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743838.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M93"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0524" sboTerm="SBO:0000243" fbc:id="PP_0524" fbc:label="PP_0524"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0524"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0524"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742687.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QG9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4688" sboTerm="SBO:0000243" fbc:id="PP_4688" fbc:label="PP_4688"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4688"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4688"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746797.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DY0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2416" sboTerm="SBO:0000243" fbc:id="PP_2416" fbc:label="PP_2416"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2416"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2416"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744564.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K75"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4687" sboTerm="SBO:0000243" fbc:id="PP_4687" fbc:label="PP_4687"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4687"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4687"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746796.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DY1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2417" sboTerm="SBO:0000243" fbc:id="PP_2417" fbc:label="PP_2417"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2417"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2417"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744565.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K74"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5306" sboTerm="SBO:0000243" fbc:id="PP_5306" fbc:label="PP_5306"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5306"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5306"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747407.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C77"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5308" sboTerm="SBO:0000243" fbc:id="PP_5308" fbc:label="PP_5308"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5308"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5308"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747409.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C75"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5307" sboTerm="SBO:0000243" fbc:id="PP_5307" fbc:label="PP_5307"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5307"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5307"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747408.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C76"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0525" sboTerm="SBO:0000243" fbc:id="PP_0525" fbc:label="PP_0525"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0525"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0525"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742688.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QG8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0260" sboTerm="SBO:0000243" fbc:id="PP_0260" fbc:label="PP_0260"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0260"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0260"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742427.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R74"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4919" sboTerm="SBO:0000243" fbc:id="PP_4919" fbc:label="PP_4919"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4919"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4919"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747022.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DA8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4266" sboTerm="SBO:0000243" fbc:id="PP_4266" fbc:label="PP_4266"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4266"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4266"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746382.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F33"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1304" sboTerm="SBO:0000243" fbc:id="PP_1304" fbc:label="PP_1304"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1304"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1304"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743464.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NA8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1303" sboTerm="SBO:0000243" fbc:id="PP_1303" fbc:label="PP_1303"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1303"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1303"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743463.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NA9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2328" sboTerm="SBO:0000243" fbc:id="PP_2328" fbc:label="PP_2328"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2328"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2328"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744477.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KG2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5215" sboTerm="SBO:0000243" fbc:id="PP_5215" fbc:label="PP_5215"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5215"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5215"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747316.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CG6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5069" sboTerm="SBO:0000243" fbc:id="PP_5069" fbc:label="PP_5069"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5069"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5069"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747170.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CW1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0510" sboTerm="SBO:0000243" fbc:id="PP_0510" fbc:label="PP_0510"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0510"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0510"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742674.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2958" sboTerm="SBO:0000243" fbc:id="PP_2958" fbc:label="PP_2958"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2958"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2958"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745102.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IP1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5054" sboTerm="SBO:0000243" fbc:id="PP_5054" fbc:label="PP_5054"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5054"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5054"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747155.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CX6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4016" sboTerm="SBO:0000243" fbc:id="PP_4016" fbc:label="PP_4016"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4016"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4016"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746146.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FR7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4889" sboTerm="SBO:0000243" fbc:id="PP_4889" fbc:label="PP_4889"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4889"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4889"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746992.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DD8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0825" sboTerm="SBO:0000243" fbc:id="PP_0825" fbc:label="PP_0825"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0825"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0825"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742986.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5135" sboTerm="SBO:0000243" fbc:id="PP_5135" fbc:label="PP_5135"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5135"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5135"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747236.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CP5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5136" sboTerm="SBO:0000243" fbc:id="PP_5136" fbc:label="PP_5136"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5136"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5136"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747237.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CP4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0826" sboTerm="SBO:0000243" fbc:id="PP_0826" fbc:label="PP_0826"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0826"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0826"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742987.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PM4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0827" sboTerm="SBO:0000243" fbc:id="PP_0827" fbc:label="PP_0827"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0827"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0827"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742988.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PM3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5137" sboTerm="SBO:0000243" fbc:id="PP_5137" fbc:label="PP_5137"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5137"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5137"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747238.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CP3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0824" sboTerm="SBO:0000243" fbc:id="PP_0824" fbc:label="PP_0824"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0824"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0824"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742985.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2209" sboTerm="SBO:0000243" fbc:id="PP_2209" fbc:label="PP_2209"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2209"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2209"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744358.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KT0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0789" sboTerm="SBO:0000243" fbc:id="PP_0789" fbc:label="PP_0789"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0789"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0789"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742950.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PQ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4897" sboTerm="SBO:0000243" fbc:id="PP_4897" fbc:label="PP_4897"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4897"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4897"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747000.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DD0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2145" sboTerm="SBO:0000243" fbc:id="PP_2145" fbc:label="PP_2145"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2145"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2145"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744294.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KZ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1355" sboTerm="SBO:0000243" fbc:id="PP_1355" fbc:label="PP_1355"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1355"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1355"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743514.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N61"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0266" sboTerm="SBO:0000243" fbc:id="PP_0266" fbc:label="PP_0266"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0266"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0266"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742433.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R68"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0501" sboTerm="SBO:0000243" fbc:id="PP_0501" fbc:label="PP_0501"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0501"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0501"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742665.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QJ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2196" sboTerm="SBO:0000243" fbc:id="PP_2196" fbc:label="PP_2196"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2196"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2196"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744345.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KU3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0058" sboTerm="SBO:0000243" fbc:id="PP_0058" fbc:label="PP_0058"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0058"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0058"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742228.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1844" sboTerm="SBO:0000243" fbc:id="PP_1844" fbc:label="PP_1844"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1844"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1844"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743999.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3633" sboTerm="SBO:0000243" fbc:id="PP_3633" fbc:label="PP_3633"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3633"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3633"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745769.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59308"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0432" sboTerm="SBO:0000243" fbc:id="PP_0432" fbc:label="PP_0432"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0432"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0432"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742598.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QQ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5388" sboTerm="SBO:0000243" fbc:id="PP_5388" fbc:label="PP_5388"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5388"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5388"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747489.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BZ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5385" sboTerm="SBO:0000243" fbc:id="PP_5385" fbc:label="PP_5385"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5385"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5385"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747486.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BZ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5386" sboTerm="SBO:0000243" fbc:id="PP_5386" fbc:label="PP_5386"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5386"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5386"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747487.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BZ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5387" sboTerm="SBO:0000243" fbc:id="PP_5387" fbc:label="PP_5387"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5387"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5387"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747488.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BZ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4976" sboTerm="SBO:0000243" fbc:id="PP_4976" fbc:label="PP_4976"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4976"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4976"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_061405715.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FWS3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2001" sboTerm="SBO:0000243" fbc:id="PP_2001" fbc:label="PP_2001"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2001"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2001"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744151.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LD4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2528" sboTerm="SBO:0000243" fbc:id="PP_2528" fbc:label="PP_2528"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2528"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2528"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744673.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4822" sboTerm="SBO:0000243" fbc:id="PP_4822" fbc:label="PP_4822"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4822"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4822"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746927.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DK3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5335" sboTerm="SBO:0000243" fbc:id="PP_5335" fbc:label="PP_5335"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5335"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5335"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747436.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C48"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5336" sboTerm="SBO:0000243" fbc:id="PP_5336" fbc:label="PP_5336"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5336"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5336"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747437.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C47"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4187" sboTerm="SBO:0000243" fbc:id="PP_4187" fbc:label="PP_4187"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4187"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4187"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746304.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FB1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4188" sboTerm="SBO:0000243" fbc:id="PP_4188" fbc:label="PP_4188"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4188"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4188"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746305.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FB0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4189" sboTerm="SBO:0000243" fbc:id="PP_4189" fbc:label="PP_4189"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4189"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4189"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746306.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FA9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1400" sboTerm="SBO:0000243" fbc:id="PP_1400" fbc:label="PP_1400"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1400"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1400"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743559.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N16"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0879" sboTerm="SBO:0000243" fbc:id="PP_0879" fbc:label="PP_0879"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0879"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0879"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743040.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PH1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0881" sboTerm="SBO:0000243" fbc:id="PP_0881" fbc:label="PP_0881"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0881"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0881"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743042.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PG9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0880" sboTerm="SBO:0000243" fbc:id="PP_0880" fbc:label="PP_0880"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0880"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0880"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743041.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PH0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0878" sboTerm="SBO:0000243" fbc:id="PP_0878" fbc:label="PP_0878"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0878"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0878"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743039.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0885" sboTerm="SBO:0000243" fbc:id="PP_0885" fbc:label="PP_0885"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0885"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0885"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743046.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PG5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0884" sboTerm="SBO:0000243" fbc:id="PP_0884" fbc:label="PP_0884"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0884"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0884"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743045.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PG6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0882" sboTerm="SBO:0000243" fbc:id="PP_0882" fbc:label="PP_0882"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0882"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0882"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743043.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PG8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4346" sboTerm="SBO:0000243" fbc:id="PP_4346" fbc:label="PP_4346"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4346"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4346"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746461.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EV6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1339" sboTerm="SBO:0000243" fbc:id="PP_1339" fbc:label="PP_1339"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1339"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1339"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743498.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N74"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0883" sboTerm="SBO:0000243" fbc:id="PP_0883" fbc:label="PP_0883"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0883"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0883"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743044.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PG7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3722" sboTerm="SBO:0000243" fbc:id="PP_3722" fbc:label="PP_3722"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3722"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3722"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745855.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GJ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5269" sboTerm="SBO:0000243" fbc:id="PP_5269" fbc:label="PP_5269"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5269"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5269"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747370.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CB2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0817" sboTerm="SBO:0000243" fbc:id="PP_0817" fbc:label="PP_0817"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0817"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0817"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742978.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PN2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1872" sboTerm="SBO:0000243" fbc:id="PP_1872" fbc:label="PP_1872"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1872"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1872"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744027.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LQ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4474" sboTerm="SBO:0000243" fbc:id="PP_4474" fbc:label="PP_4474"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4474"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4474"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746585.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4840" sboTerm="SBO:0000243" fbc:id="PP_4840" fbc:label="PP_4840"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4840"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4840"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746945.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DI5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0496" sboTerm="SBO:0000243" fbc:id="PP_0496" fbc:label="PP_0496"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0496"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0496"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742661.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QJ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0545" sboTerm="SBO:0000243" fbc:id="PP_0545" fbc:label="PP_0545"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0545"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0545"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742708.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QE9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2694" sboTerm="SBO:0000243" fbc:id="PP_2694" fbc:label="PP_2694"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2694"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2694"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744838.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JF5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1616" sboTerm="SBO:0000243" fbc:id="PP_1616" fbc:label="PP_1616"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1616"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1616"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743773.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MF5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3839" sboTerm="SBO:0000243" fbc:id="PP_3839" fbc:label="PP_3839"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3839"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3839"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745969.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88G86"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2674" sboTerm="SBO:0000243" fbc:id="PP_2674" fbc:label="PP_2674"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2674"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2674"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744818.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JH5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3970" sboTerm="SBO:0000243" fbc:id="PP_3970" fbc:label="PP_3970"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3970"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3970"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746100.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FV8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0328" sboTerm="SBO:0000243" fbc:id="PP_0328" fbc:label="PP_0328"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0328"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0328"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742495.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R06"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2680" sboTerm="SBO:0000243" fbc:id="PP_2680" fbc:label="PP_2680"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2680"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2680"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744824.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JG9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3463" sboTerm="SBO:0000243" fbc:id="PP_3463" fbc:label="PP_3463"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3463"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3463"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745601.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H97"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3464" sboTerm="SBO:0000243" fbc:id="PP_3464" fbc:label="PP_3464"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3464"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3464"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745602.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3465" sboTerm="SBO:0000243" fbc:id="PP_3465" fbc:label="PP_3465"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3465"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3465"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2589" sboTerm="SBO:0000243" fbc:id="PP_2589" fbc:label="PP_2589"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2589"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2589"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744733.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JR0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1280" sboTerm="SBO:0000243" fbc:id="PP_1280" fbc:label="PP_1280"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1280"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1280"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743440.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88ND2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1279" sboTerm="SBO:0000243" fbc:id="PP_1279" fbc:label="PP_1279"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1279"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1279"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743439.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88ND3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1278" sboTerm="SBO:0000243" fbc:id="PP_1278" fbc:label="PP_1278"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1278"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1278"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743438.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88ND4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1283" sboTerm="SBO:0000243" fbc:id="PP_1283" fbc:label="PP_1283"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1283"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1283"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743443.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NC9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1281" sboTerm="SBO:0000243" fbc:id="PP_1281" fbc:label="PP_1281"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1281"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1281"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743441.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88ND1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1284" sboTerm="SBO:0000243" fbc:id="PP_1284" fbc:label="PP_1284"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1284"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1284"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743444.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NC8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0614" sboTerm="SBO:0000243" fbc:id="PP_0614" fbc:label="PP_0614"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0614"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0614"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742776.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q81"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3530" sboTerm="SBO:0000243" fbc:id="PP_3530" fbc:label="PP_3530"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3530"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3530"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745667.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H35"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4034" sboTerm="SBO:0000243" fbc:id="PP_4034" fbc:label="PP_4034"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4034"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4034"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746162.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FQ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4286" sboTerm="SBO:0000243" fbc:id="PP_4286" fbc:label="PP_4286"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4286"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4286"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746402.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F13"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4310" sboTerm="SBO:0000243" fbc:id="PP_4310" fbc:label="PP_4310"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4310"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4310"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746426.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EZ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4309" sboTerm="SBO:0000243" fbc:id="PP_4309" fbc:label="PP_4309"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4309"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4309"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746425.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EZ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4790" sboTerm="SBO:0000243" fbc:id="PP_4790" fbc:label="PP_4790"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4790"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4790"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746895.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DN4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5226" sboTerm="SBO:0000243" fbc:id="PP_5226" fbc:label="PP_5226"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5226"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5226"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747327.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CF5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2834" sboTerm="SBO:0000243" fbc:id="PP_2834" fbc:label="PP_2834"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2834"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2834"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744978.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J15"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4984" sboTerm="SBO:0000243" fbc:id="PP_4984" fbc:label="PP_4984"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4984"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4984"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747086.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D44"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3846" sboTerm="SBO:0000243" fbc:id="PP_3846" fbc:label="PP_3846"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3846"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3846"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745976.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88G79"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4922" sboTerm="SBO:0000243" fbc:id="PP_4922" fbc:label="PP_4922"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4922"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4922"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747025.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DA5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4779" sboTerm="SBO:0000243" fbc:id="PP_4779" fbc:label="PP_4779"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4779"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4779"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746884.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DP5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0980" sboTerm="SBO:0000243" fbc:id="PP_0980" fbc:label="PP_0980"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0980"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0980"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743141.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P73"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2017" sboTerm="SBO:0000243" fbc:id="PP_2017" fbc:label="PP_2017"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2017"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2017"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744167.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LB8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0434" sboTerm="SBO:0000243" fbc:id="PP_0434" fbc:label="PP_0434"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0434"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0434"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742600.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QQ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0421" sboTerm="SBO:0000243" fbc:id="PP_0421" fbc:label="PP_0421"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0421"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0421"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742587.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QR7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0417" sboTerm="SBO:0000243" fbc:id="PP_0417" fbc:label="PP_0417"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0417"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0417"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742583.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0420" sboTerm="SBO:0000243" fbc:id="PP_0420" fbc:label="PP_0420"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0420"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0420"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742586.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QR8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0363" sboTerm="SBO:0000243" fbc:id="PP_0363" fbc:label="PP_0363"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0363"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0363"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742530.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QX1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0399" sboTerm="SBO:0000243" fbc:id="PP_0399" fbc:label="PP_0399"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0399"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0399"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742566.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QT8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1496" sboTerm="SBO:0000243" fbc:id="PP_1496" fbc:label="PP_1496"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1496"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1496"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743653.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MS3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3279" sboTerm="SBO:0000243" fbc:id="PP_3279" fbc:label="PP_3279"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3279"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3279"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745422.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1384" sboTerm="SBO:0000243" fbc:id="PP_1384" fbc:label="PP_1384"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1384"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1384"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743543.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N32"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0960" sboTerm="SBO:0000243" fbc:id="PP_0960" fbc:label="PP_0960"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0960"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0960"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743121.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P92"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1386" sboTerm="SBO:0000243" fbc:id="PP_1386" fbc:label="PP_1386"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1386"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1386"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743545.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N30"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0959" sboTerm="SBO:0000243" fbc:id="PP_0959" fbc:label="PP_0959"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0959"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0959"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743120.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P93"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1385" sboTerm="SBO:0000243" fbc:id="PP_1385" fbc:label="PP_1385"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1385"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1385"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743544.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N31"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0958" sboTerm="SBO:0000243" fbc:id="PP_0958" fbc:label="PP_0958"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0958"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0958"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743119.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P94"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0382" sboTerm="SBO:0000243" fbc:id="PP_0382" fbc:label="PP_0382"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0382"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0382"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742549.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QV2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0391" sboTerm="SBO:0000243" fbc:id="PP_0391" fbc:label="PP_0391"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0391"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0391"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742558.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QU5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0514" sboTerm="SBO:0000243" fbc:id="PP_0514" fbc:label="PP_0514"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0514"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0514"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742677.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QH9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2594" sboTerm="SBO:0000243" fbc:id="PP_2594" fbc:label="PP_2594"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2594"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2594"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744738.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JQ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2418" sboTerm="SBO:0000243" fbc:id="PP_2418" fbc:label="PP_2418"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2418"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2418"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744566.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K73"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2593" sboTerm="SBO:0000243" fbc:id="PP_2593" fbc:label="PP_2593"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2593"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2593"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744737.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JQ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2591" sboTerm="SBO:0000243" fbc:id="PP_2591" fbc:label="PP_2591"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2591"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2591"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744735.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JQ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2592" sboTerm="SBO:0000243" fbc:id="PP_2592" fbc:label="PP_2592"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2592"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2592"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744736.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JQ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2193" sboTerm="SBO:0000243" fbc:id="PP_2193" fbc:label="PP_2193"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2193"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2193"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744342.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KU6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2428" sboTerm="SBO:0000243" fbc:id="PP_2428" fbc:label="PP_2428"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2428"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2428"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744576.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K63"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1001" sboTerm="SBO:0000243" fbc:id="PP_1001" fbc:label="PP_1001"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1001"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1001"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743162.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P52"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0567" sboTerm="SBO:0000243" fbc:id="PP_0567" fbc:label="PP_0567"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0567"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0567"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742730.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QC7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1002" sboTerm="SBO:0000243" fbc:id="PP_1002" fbc:label="PP_1002"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1002"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1002"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743163.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P51"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1003" sboTerm="SBO:0000243" fbc:id="PP_1003" fbc:label="PP_1003"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1003"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1003"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743164.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P50"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0184" sboTerm="SBO:0000243" fbc:id="PP_0184" fbc:label="PP_0184"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0184"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0184"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742353.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59618"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1088" sboTerm="SBO:0000243" fbc:id="PP_1088" fbc:label="PP_1088"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1088"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1088"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743249.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59604"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5089" sboTerm="SBO:0000243" fbc:id="PP_5089" fbc:label="PP_5089"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5089"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5089"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747190.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CU1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1300" sboTerm="SBO:0000243" fbc:id="PP_1300" fbc:label="PP_1300"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1300"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1300"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743460.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NB2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4485" sboTerm="SBO:0000243" fbc:id="PP_4485" fbc:label="PP_4485"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4485"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4485"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746596.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EH8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1299" sboTerm="SBO:0000243" fbc:id="PP_1299" fbc:label="PP_1299"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1299"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1299"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743459.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NB3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4486" sboTerm="SBO:0000243" fbc:id="PP_4486" fbc:label="PP_4486"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4486"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4486"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746597.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EH7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4484" sboTerm="SBO:0000243" fbc:id="PP_4484" fbc:label="PP_4484"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4484"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4484"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746595.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EH9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4483" sboTerm="SBO:0000243" fbc:id="PP_4483" fbc:label="PP_4483"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4483"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4483"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746594.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1298" sboTerm="SBO:0000243" fbc:id="PP_1298" fbc:label="PP_1298"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1298"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1298"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743458.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NB4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1297" sboTerm="SBO:0000243" fbc:id="PP_1297" fbc:label="PP_1297"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1297"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1297"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743457.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NB5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3727" sboTerm="SBO:0000243" fbc:id="PP_3727" fbc:label="PP_3727"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3727"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3727"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745859.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GJ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1206" sboTerm="SBO:0000243" fbc:id="PP_1206" fbc:label="PP_1206"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1206"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1206"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743366.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1769" sboTerm="SBO:0000243" fbc:id="PP_1769" fbc:label="PP_1769"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1769"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1769"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743925.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M06"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3721" sboTerm="SBO:0000243" fbc:id="PP_3721" fbc:label="PP_3721"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3721"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3721"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745854.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GK0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1989" sboTerm="SBO:0000243" fbc:id="PP_1989" fbc:label="PP_1989"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1989"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1989"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744140.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LE4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1160" sboTerm="SBO:0000243" fbc:id="PP_1160" fbc:label="PP_1160"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1160"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743320.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NP7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0495" sboTerm="SBO:0000243" fbc:id="PP_0495" fbc:label="PP_0495"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0495"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0495"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742660.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QJ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2453" sboTerm="SBO:0000243" fbc:id="PP_2453" fbc:label="PP_2453"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2453"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2453"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744601.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K39"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1750" sboTerm="SBO:0000243" fbc:id="PP_1750" fbc:label="PP_1750"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1750"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1750"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743906.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M25"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2717" sboTerm="SBO:0000243" fbc:id="PP_2717" fbc:label="PP_2717"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2717"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2717"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744861.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JD2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1929" sboTerm="SBO:0000243" fbc:id="PP_1929" fbc:label="PP_1929"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1929"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1929"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744082.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1373" sboTerm="SBO:0000243" fbc:id="PP_1373" fbc:label="PP_1373"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1373"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1373"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743532.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N43"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4103" sboTerm="SBO:0000243" fbc:id="PP_4103" fbc:label="PP_4103"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4103"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4103"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746223.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FJ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4222" sboTerm="SBO:0000243" fbc:id="PP_4222" fbc:label="PP_4222"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4222"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4222"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746339.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F76"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4999" sboTerm="SBO:0000243" fbc:id="PP_4999" fbc:label="PP_4999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4999"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4999"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747101.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D29"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4998" sboTerm="SBO:0000243" fbc:id="PP_4998" fbc:label="PP_4998"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4998"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4998"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747100.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D30"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4473" sboTerm="SBO:0000243" fbc:id="PP_4473" fbc:label="PP_4473"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4473"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4473"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746584.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1426" sboTerm="SBO:0000243" fbc:id="PP_1426" fbc:label="PP_1426"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1426"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1426"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743584.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MZ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4422" sboTerm="SBO:0000243" fbc:id="PP_4422" fbc:label="PP_4422"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4422"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4422"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746535.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EN2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5338" sboTerm="SBO:0000243" fbc:id="PP_5338" fbc:label="PP_5338"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5338"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5338"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747439.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C45"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1972" sboTerm="SBO:0000243" fbc:id="PP_1972" fbc:label="PP_1972"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1972"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1972"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744123.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LG1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1213" sboTerm="SBO:0000243" fbc:id="PP_1213" fbc:label="PP_1213"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1213"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1213"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743373.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NJ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1069" sboTerm="SBO:0000243" fbc:id="PP_1069" fbc:label="PP_1069"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1069"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1069"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743230.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NY4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1071" sboTerm="SBO:0000243" fbc:id="PP_1071" fbc:label="PP_1071"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1071"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1071"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743232.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NY2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1068" sboTerm="SBO:0000243" fbc:id="PP_1068" fbc:label="PP_1068"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1068"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1068"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743229.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NY5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1070" sboTerm="SBO:0000243" fbc:id="PP_1070" fbc:label="PP_1070"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1070"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1070"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743231.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NY3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0137" sboTerm="SBO:0000243" fbc:id="PP_0137" fbc:label="PP_0137"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0137"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0137"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742307.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RJ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1645" sboTerm="SBO:0000243" fbc:id="PP_1645" fbc:label="PP_1645"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1645"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1645"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743802.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MC8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1928" sboTerm="SBO:0000243" fbc:id="PP_1928" fbc:label="PP_1928"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1928"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1928"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744081.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LK3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2716" sboTerm="SBO:0000243" fbc:id="PP_2716" fbc:label="PP_2716"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2716"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2716"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744860.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JD3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4479" sboTerm="SBO:0000243" fbc:id="PP_4479" fbc:label="PP_4479"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4479"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4479"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746590.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4480" sboTerm="SBO:0000243" fbc:id="PP_4480" fbc:label="PP_4480"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4480"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4480"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746591.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4862" sboTerm="SBO:0000243" fbc:id="PP_4862" fbc:label="PP_4862"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4862"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4862"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746967.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DG3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4890" sboTerm="SBO:0000243" fbc:id="PP_4890" fbc:label="PP_4890"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4890"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4890"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746993.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DD7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0965" sboTerm="SBO:0000243" fbc:id="PP_0965" fbc:label="PP_0965"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0965"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0965"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743126.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P87"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5416" sboTerm="SBO:0000243" fbc:id="PP_5416" fbc:label="PP_5416"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5416"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5416"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747516.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5420" sboTerm="SBO:0000243" fbc:id="PP_5420" fbc:label="PP_5420"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5420"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5420"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747520.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A103"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5414" sboTerm="SBO:0000243" fbc:id="PP_5414" fbc:label="PP_5414"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5414"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5414"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747514.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5419" sboTerm="SBO:0000243" fbc:id="PP_5419" fbc:label="PP_5419"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5419"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5419"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747519.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BW8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5418" sboTerm="SBO:0000243" fbc:id="PP_5418" fbc:label="PP_5418"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5418"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5418"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747518.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5415" sboTerm="SBO:0000243" fbc:id="PP_5415" fbc:label="PP_5415"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5415"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5415"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747515.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5413" sboTerm="SBO:0000243" fbc:id="PP_5413" fbc:label="PP_5413"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5413"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5413"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747513.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5412" sboTerm="SBO:0000243" fbc:id="PP_5412" fbc:label="PP_5412"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5412"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5412"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747512.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5417" sboTerm="SBO:0000243" fbc:id="PP_5417" fbc:label="PP_5417"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5417"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5417"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747517.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0437" sboTerm="SBO:0000243" fbc:id="PP_0437" fbc:label="PP_0437"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0437"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0437"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742603.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QQ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3844" sboTerm="SBO:0000243" fbc:id="PP_3844" fbc:label="PP_3844"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3844"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3844"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745974.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88G81"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0284" sboTerm="SBO:0000243" fbc:id="PP_0284" fbc:label="PP_0284"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0284"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0284"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742451.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R50"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3073" sboTerm="SBO:0000243" fbc:id="PP_3073" fbc:label="PP_3073"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3073"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3073"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745217.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IC6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5063" sboTerm="SBO:0000243" fbc:id="PP_5063" fbc:label="PP_5063"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5063"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5063"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747164.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CW7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1403" sboTerm="SBO:0000243" fbc:id="PP_1403" fbc:label="PP_1403"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1403"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1403"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743562.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N13"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3074" sboTerm="SBO:0000243" fbc:id="PP_3074" fbc:label="PP_3074"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3074"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3074"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745218.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IC5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1674" sboTerm="SBO:0000243" fbc:id="PP_1674" fbc:label="PP_1674"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1674"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1674"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743831.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MA0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2123" sboTerm="SBO:0000243" fbc:id="PP_2123" fbc:label="PP_2123"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2123"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2123"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744272.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L14"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3457" sboTerm="SBO:0000243" fbc:id="PP_3457" fbc:label="PP_3457"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3457"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3457"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745595.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HA3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0261" sboTerm="SBO:0000243" fbc:id="PP_0261" fbc:label="PP_0261"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0261"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0261"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742428.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R73"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0552" sboTerm="SBO:0000243" fbc:id="PP_0552" fbc:label="PP_0552"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0552"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0552"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742715.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QE2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0362" sboTerm="SBO:0000243" fbc:id="PP_0362" fbc:label="PP_0362"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0362"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0362"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742529.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QX2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0232" sboTerm="SBO:0000243" fbc:id="PP_0232" fbc:label="PP_0232"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0232"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0232"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742400.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0240" sboTerm="SBO:0000243" fbc:id="PP_0240" fbc:label="PP_0240"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0240"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0240"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742408.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R93"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0237" sboTerm="SBO:0000243" fbc:id="PP_0237" fbc:label="PP_0237"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0237"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0237"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742405.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0239" sboTerm="SBO:0000243" fbc:id="PP_0239" fbc:label="PP_0239"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0239"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0239"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742407.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R94"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0233" sboTerm="SBO:0000243" fbc:id="PP_0233" fbc:label="PP_0233"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0233"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0233"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742401.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0231" sboTerm="SBO:0000243" fbc:id="PP_0231" fbc:label="PP_0231"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0231"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0231"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742399.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0234" sboTerm="SBO:0000243" fbc:id="PP_0234" fbc:label="PP_0234"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0234"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0234"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742402.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R99"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_101" sboTerm="SBO:0000243" fbc:id="pWW0_101" fbc:label="pWW0_101"/> <fbc:geneProduct metaid="PP_3161" sboTerm="SBO:0000243" fbc:id="PP_3161" fbc:label="PP_3161"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3161"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745305.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_102" sboTerm="SBO:0000243" fbc:id="pWW0_102" fbc:label="pWW0_102"/> <fbc:geneProduct metaid="pWW0_100" sboTerm="SBO:0000243" fbc:id="pWW0_100" fbc:label="pWW0_100"/> <fbc:geneProduct metaid="PP_3162" sboTerm="SBO:0000243" fbc:id="PP_3162" fbc:label="PP_3162"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3162"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3162"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745306.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I39"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3163" sboTerm="SBO:0000243" fbc:id="PP_3163" fbc:label="PP_3163"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3163"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3163"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745307.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I38"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_099" sboTerm="SBO:0000243" fbc:id="pWW0_099" fbc:label="pWW0_099"/> <fbc:geneProduct metaid="PP_3164" sboTerm="SBO:0000243" fbc:id="PP_3164" fbc:label="PP_3164"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3164"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3164"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745308.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I37"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3165" sboTerm="SBO:0000243" fbc:id="PP_3165" fbc:label="PP_3165"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3165"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3165"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745309.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I36"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3168" sboTerm="SBO:0000243" fbc:id="PP_3168" fbc:label="PP_3168"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3168"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3168"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745312.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I33"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3358" sboTerm="SBO:0000243" fbc:id="PP_3358" fbc:label="PP_3358"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3358"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3358"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745498.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HJ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3941" sboTerm="SBO:0000243" fbc:id="PP_3941" fbc:label="PP_3941"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3941"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3941"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746071.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FY5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3668" sboTerm="SBO:0000243" fbc:id="PP_3668" fbc:label="PP_3668"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3668"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3668"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745804.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GQ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0115" sboTerm="SBO:0000243" fbc:id="PP_0115" fbc:label="PP_0115"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0115"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0115"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742285.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RL4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3713" sboTerm="SBO:0000243" fbc:id="PP_3713" fbc:label="PP_3713"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3713"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3713"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745846.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GK8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3166" sboTerm="SBO:0000243" fbc:id="PP_3166" fbc:label="PP_3166"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3166"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3166"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745310.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I35"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0481" sboTerm="SBO:0000243" fbc:id="PP_0481" fbc:label="PP_0481"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0481"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0481"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742647.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QK9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2887" sboTerm="SBO:0000243" fbc:id="PP_2887" fbc:label="PP_2887"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2887"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2887"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745031.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IW2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0928" sboTerm="SBO:0000243" fbc:id="PP_0928" fbc:label="PP_0928"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0928"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0928"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743089.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PC2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1672" sboTerm="SBO:0000243" fbc:id="PP_1672" fbc:label="PP_1672"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1672"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1672"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743829.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MA2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0999" sboTerm="SBO:0000243" fbc:id="PP_0999" fbc:label="PP_0999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0999"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0999"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743160.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P54"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5340" sboTerm="SBO:0000243" fbc:id="PP_5340" fbc:label="PP_5340"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5340"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5340"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747441.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C43"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4723" sboTerm="SBO:0000243" fbc:id="PP_4723" fbc:label="PP_4723"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4723"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4723"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746831.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DU6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4724" sboTerm="SBO:0000243" fbc:id="PP_4724" fbc:label="PP_4724"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4724"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4724"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746832.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DU5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1226" sboTerm="SBO:0000243" fbc:id="PP_1226" fbc:label="PP_1226"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1226"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1226"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743386.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NI3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2943" sboTerm="SBO:0000243" fbc:id="PP_2943" fbc:label="PP_2943"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2943"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2943"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745087.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IQ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5139" sboTerm="SBO:0000243" fbc:id="PP_5139" fbc:label="PP_5139"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5139"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5139"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747240.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CP1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4774" sboTerm="SBO:0000243" fbc:id="PP_4774" fbc:label="PP_4774"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4774"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4774"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746880.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DP9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0026" sboTerm="SBO:0000243" fbc:id="PP_0026" fbc:label="PP_0026"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0026"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0026"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742196.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RV3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0044" sboTerm="SBO:0000243" fbc:id="PP_0044" fbc:label="PP_0044"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0044"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0044"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742214.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RT5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0045" sboTerm="SBO:0000243" fbc:id="PP_0045" fbc:label="PP_0045"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0045"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0045"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742215.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RT4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0043" sboTerm="SBO:0000243" fbc:id="PP_0043" fbc:label="PP_0043"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0043"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0043"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742213.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RT6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2160" sboTerm="SBO:0000243" fbc:id="PP_2160" fbc:label="PP_2160"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2160"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744309.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KX9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1225" sboTerm="SBO:0000243" fbc:id="PP_1225" fbc:label="PP_1225"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1225"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1225"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743385.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NI4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0723" sboTerm="SBO:0000243" fbc:id="PP_0723" fbc:label="PP_0723"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0723"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0723"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742884.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PX5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2637" sboTerm="SBO:0000243" fbc:id="PP_2637" fbc:label="PP_2637"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2637"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2637"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744781.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JL2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2638" sboTerm="SBO:0000243" fbc:id="PP_2638" fbc:label="PP_2638"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2638"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2638"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744782.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JL1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2636" sboTerm="SBO:0000243" fbc:id="PP_2636" fbc:label="PP_2636"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2636"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2636"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744780.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JL3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2635" sboTerm="SBO:0000243" fbc:id="PP_2635" fbc:label="PP_2635"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2635"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2635"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744779.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JL4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2734" sboTerm="SBO:0000243" fbc:id="PP_2734" fbc:label="PP_2734"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2734"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2734"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744878.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JB5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0871" sboTerm="SBO:0000243" fbc:id="PP_0871" fbc:label="PP_0871"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0871"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0871"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743032.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PH9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0870" sboTerm="SBO:0000243" fbc:id="PP_0870" fbc:label="PP_0870"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0870"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0870"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743031.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0296" sboTerm="SBO:0000243" fbc:id="PP_0296" fbc:label="PP_0296"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0296"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0296"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742463.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R38"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0295" sboTerm="SBO:0000243" fbc:id="PP_0295" fbc:label="PP_0295"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0295"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0295"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742462.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R39"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0294" sboTerm="SBO:0000243" fbc:id="PP_0294" fbc:label="PP_0294"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0294"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0294"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742461.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0869" sboTerm="SBO:0000243" fbc:id="PP_0869" fbc:label="PP_0869"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0869"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0869"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743030.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PI1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0868" sboTerm="SBO:0000243" fbc:id="PP_0868" fbc:label="PP_0868"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0868"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0868"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743029.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5064" sboTerm="SBO:0000243" fbc:id="PP_5064" fbc:label="PP_5064"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5064"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5064"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747165.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CW6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0077" sboTerm="SBO:0000243" fbc:id="PP_0077" fbc:label="PP_0077"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0077"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0077"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742247.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RQ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0075" sboTerm="SBO:0000243" fbc:id="PP_0075" fbc:label="PP_0075"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0075"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0075"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742245.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RQ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0076" sboTerm="SBO:0000243" fbc:id="PP_0076" fbc:label="PP_0076"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0076"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0076"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742246.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RQ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0229" sboTerm="SBO:0000243" fbc:id="PP_0229" fbc:label="PP_0229"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0229"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0229"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742397.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3957" sboTerm="SBO:0000243" fbc:id="PP_3957" fbc:label="PP_3957"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3957"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3957"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746087.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FX0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5374" sboTerm="SBO:0000243" fbc:id="PP_5374" fbc:label="PP_5374"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5374"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5374"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747475.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C09"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5061" sboTerm="SBO:0000243" fbc:id="PP_5061" fbc:label="PP_5061"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5061"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5061"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747162.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1830" sboTerm="SBO:0000243" fbc:id="PP_1830" fbc:label="PP_1830"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1830"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1830"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743985.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LU7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5317" sboTerm="SBO:0000243" fbc:id="PP_5317" fbc:label="PP_5317"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5317"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5317"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747418.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C66"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0147" sboTerm="SBO:0000243" fbc:id="PP_0147" fbc:label="PP_0147"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0147"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0147"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742317.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2057" sboTerm="SBO:0000243" fbc:id="PP_2057" fbc:label="PP_2057"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2057"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2057"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744207.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L78"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2703" sboTerm="SBO:0000243" fbc:id="PP_2703" fbc:label="PP_2703"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2703"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2703"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744847.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JE6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3264" sboTerm="SBO:0000243" fbc:id="PP_3264" fbc:label="PP_3264"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3264"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3264"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745407.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HT9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5364" sboTerm="SBO:0000243" fbc:id="PP_5364" fbc:label="PP_5364"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5364"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5364"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747465.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C19"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3959" sboTerm="SBO:0000243" fbc:id="PP_3959" fbc:label="PP_3959"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3959"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3959"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746089.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FW8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2590" sboTerm="SBO:0000243" fbc:id="PP_2590" fbc:label="PP_2590"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2590"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2590"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744734.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JQ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3989" sboTerm="SBO:0000243" fbc:id="PP_3989" fbc:label="PP_3989"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3989"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3989"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746119.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FU3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2669" sboTerm="SBO:0000243" fbc:id="PP_2669" fbc:label="PP_2669"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2669"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2669"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744813.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2667" sboTerm="SBO:0000243" fbc:id="PP_2667" fbc:label="PP_2667"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2667"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2667"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744811.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2668" sboTerm="SBO:0000243" fbc:id="PP_2668" fbc:label="PP_2668"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2668"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2668"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744812.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JI1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5120" sboTerm="SBO:0000243" fbc:id="PP_5120" fbc:label="PP_5120"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5120"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747221.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CR0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2955" sboTerm="SBO:0000243" fbc:id="PP_2955" fbc:label="PP_2955"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2955"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2955"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745099.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IP4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1843" sboTerm="SBO:0000243" fbc:id="PP_1843" fbc:label="PP_1843"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1843"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1843"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743998.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LT4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4829" sboTerm="SBO:0000243" fbc:id="PP_4829" fbc:label="PP_4829"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4829"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4829"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746934.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DJ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3507" sboTerm="SBO:0000243" fbc:id="PP_3507" fbc:label="PP_3507"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3507"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3507"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745644.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H58"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4935" sboTerm="SBO:0000243" fbc:id="PP_4935" fbc:label="PP_4935"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4935"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4935"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747038.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D92"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2341" sboTerm="SBO:0000243" fbc:id="PP_2341" fbc:label="PP_2341"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2341"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2341"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744490.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KE9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2482" sboTerm="SBO:0000243" fbc:id="PP_2482" fbc:label="PP_2482"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2482"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2482"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744630.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K11"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4597" sboTerm="SBO:0000243" fbc:id="PP_4597" fbc:label="PP_4597"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4597"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4597"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746706.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E69"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1969" sboTerm="SBO:0000243" fbc:id="PP_1969" fbc:label="PP_1969"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1969"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1969"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744120.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LG4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1292" sboTerm="SBO:0000243" fbc:id="PP_1292" fbc:label="PP_1292"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1292"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1292"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743452.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NC0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0073" sboTerm="SBO:0000243" fbc:id="PP_0073" fbc:label="PP_0073"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0073"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0073"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742243.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RQ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4264" sboTerm="SBO:0000243" fbc:id="PP_4264" fbc:label="PP_4264"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4264"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4264"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746380.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F35"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3667" sboTerm="SBO:0000243" fbc:id="PP_3667" fbc:label="PP_3667"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3667"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3667"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745803.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GQ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3666" sboTerm="SBO:0000243" fbc:id="PP_3666" fbc:label="PP_3666"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3666"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3666"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745802.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GQ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0302" sboTerm="SBO:0000243" fbc:id="PP_0302" fbc:label="PP_0302"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0302"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0302"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742469.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R32"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0303" sboTerm="SBO:0000243" fbc:id="PP_0303" fbc:label="PP_0303"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0303"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0303"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742470.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R31"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0301" sboTerm="SBO:0000243" fbc:id="PP_0301" fbc:label="PP_0301"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0301"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0301"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742468.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R33"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0304" sboTerm="SBO:0000243" fbc:id="PP_0304" fbc:label="PP_0304"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0304"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0304"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742471.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R30"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2556" sboTerm="SBO:0000243" fbc:id="PP_2556" fbc:label="PP_2556"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2556"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2556"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744701.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JU1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3720" sboTerm="SBO:0000243" fbc:id="PP_3720" fbc:label="PP_3720"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3720"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3720"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745853.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4305" sboTerm="SBO:0000243" fbc:id="PP_4305" fbc:label="PP_4305"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4305"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4305"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746421.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EZ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5168" sboTerm="SBO:0000243" fbc:id="PP_5168" fbc:label="PP_5168"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5168"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5168"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747269.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CL2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5171" sboTerm="SBO:0000243" fbc:id="PP_5171" fbc:label="PP_5171"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5171"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5171"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747272.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CK9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5170" sboTerm="SBO:0000243" fbc:id="PP_5170" fbc:label="PP_5170"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5170"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5170"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747271.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CL0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5169" sboTerm="SBO:0000243" fbc:id="PP_5169" fbc:label="PP_5169"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5169"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5169"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747270.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CL1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3189" sboTerm="SBO:0000243" fbc:id="PP_3189" fbc:label="PP_3189"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3189"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3189"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745333.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I13"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4194" sboTerm="SBO:0000243" fbc:id="PP_4194" fbc:label="PP_4194"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4194"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4194"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746311.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FA4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3187" sboTerm="SBO:0000243" fbc:id="PP_3187" fbc:label="PP_3187"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3187"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3187"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745331.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I15"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2929" sboTerm="SBO:0000243" fbc:id="PP_2929" fbc:label="PP_2929"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2929"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2929"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745073.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IS0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2928" sboTerm="SBO:0000243" fbc:id="PP_2928" fbc:label="PP_2928"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2928"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2928"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745072.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1610" sboTerm="SBO:0000243" fbc:id="PP_1610" fbc:label="PP_1610"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1610"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1610"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743767.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MG1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0586" sboTerm="SBO:0000243" fbc:id="PP_0586" fbc:label="PP_0586"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0586"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0586"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742749.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QA8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4838" sboTerm="SBO:0000243" fbc:id="PP_4838" fbc:label="PP_4838"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4838"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4838"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746943.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DI7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0398" sboTerm="SBO:0000243" fbc:id="PP_0398" fbc:label="PP_0398"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0398"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0398"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742565.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QT9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4907" sboTerm="SBO:0000243" fbc:id="PP_4907" fbc:label="PP_4907"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4907"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4907"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747010.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DC0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5118" sboTerm="SBO:0000243" fbc:id="PP_5118" fbc:label="PP_5118"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5118"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5118"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747219.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CR2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0970" sboTerm="SBO:0000243" fbc:id="PP_0970" fbc:label="PP_0970"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0970"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0970"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743131.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P83"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3751" sboTerm="SBO:0000243" fbc:id="PP_3751" fbc:label="PP_3751"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3751"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3751"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745882.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1317" sboTerm="SBO:0000243" fbc:id="PP_1317" fbc:label="PP_1317"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1317"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1317"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743477.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1318" sboTerm="SBO:0000243" fbc:id="PP_1318" fbc:label="PP_1318"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1318"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1318"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743478.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N94"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1319" sboTerm="SBO:0000243" fbc:id="PP_1319" fbc:label="PP_1319"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1319"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1319"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743479.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N93"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2675" sboTerm="SBO:0000243" fbc:id="PP_2675" fbc:label="PP_2675"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2675"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2675"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744819.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JH4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4571" sboTerm="SBO:0000243" fbc:id="PP_4571" fbc:label="PP_4571"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4571"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4571"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746680.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1654" sboTerm="SBO:0000243" fbc:id="PP_1654" fbc:label="PP_1654"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1654"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1654"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743811.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MC0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1529" sboTerm="SBO:0000243" fbc:id="PP_1529" fbc:label="PP_1529"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1529"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1529"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743686.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q9Z408"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0659" sboTerm="SBO:0000243" fbc:id="PP_0659" fbc:label="PP_0659"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0659"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0659"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742820.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q39"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4594" sboTerm="SBO:0000243" fbc:id="PP_4594" fbc:label="PP_4594"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4594"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4594"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746703.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E72"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2905" sboTerm="SBO:0000243" fbc:id="PP_2905" fbc:label="PP_2905"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2905"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2905"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745049.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IU4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0658" sboTerm="SBO:0000243" fbc:id="PP_0658" fbc:label="PP_0658"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0658"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0658"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742819.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0227" sboTerm="SBO:0000243" fbc:id="PP_0227" fbc:label="PP_0227"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0227"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0227"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742395.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0226" sboTerm="SBO:0000243" fbc:id="PP_0226" fbc:label="PP_0226"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0226"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0226"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742394.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0225" sboTerm="SBO:0000243" fbc:id="PP_0225" fbc:label="PP_0225"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0225"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0225"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742393.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4650" sboTerm="SBO:0000243" fbc:id="PP_4650" fbc:label="PP_4650"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4650"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4650"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746759.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E18"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4651" sboTerm="SBO:0000243" fbc:id="PP_4651" fbc:label="PP_4651"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4651"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4651"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746760.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E17"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0815" sboTerm="SBO:0000243" fbc:id="PP_0815" fbc:label="PP_0815"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0815"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0815"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742976.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PN4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0812" sboTerm="SBO:0000243" fbc:id="PP_0812" fbc:label="PP_0812"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0812"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0812"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742973.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PN7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0813" sboTerm="SBO:0000243" fbc:id="PP_0813" fbc:label="PP_0813"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0813"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0813"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742974.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PN6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0814" sboTerm="SBO:0000243" fbc:id="PP_0814" fbc:label="PP_0814"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0814"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0814"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742975.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PN5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0104" sboTerm="SBO:0000243" fbc:id="PP_0104" fbc:label="PP_0104"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0104"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0104"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742274.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0105" sboTerm="SBO:0000243" fbc:id="PP_0105" fbc:label="PP_0105"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0105"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0105"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742275.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RM4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0103" sboTerm="SBO:0000243" fbc:id="PP_0103" fbc:label="PP_0103"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0103"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0103"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742273.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0106" sboTerm="SBO:0000243" fbc:id="PP_0106" fbc:label="PP_0106"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0106"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0106"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742276.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RM3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4253" sboTerm="SBO:0000243" fbc:id="PP_4253" fbc:label="PP_4253"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4253"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4253"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746369.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F46"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4256" sboTerm="SBO:0000243" fbc:id="PP_4256" fbc:label="PP_4256"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4256"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4256"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746372.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F43"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4257" sboTerm="SBO:0000243" fbc:id="PP_4257" fbc:label="PP_4257"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4257"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4257"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746373.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F42"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4258" sboTerm="SBO:0000243" fbc:id="PP_4258" fbc:label="PP_4258"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4258"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4258"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746374.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F41"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4255" sboTerm="SBO:0000243" fbc:id="PP_4255" fbc:label="PP_4255"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4255"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4255"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746371.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F44"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4251" sboTerm="SBO:0000243" fbc:id="PP_4251" fbc:label="PP_4251"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4251"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4251"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746367.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F48"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4252" sboTerm="SBO:0000243" fbc:id="PP_4252" fbc:label="PP_4252"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4252"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4252"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746368.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F47"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4250" sboTerm="SBO:0000243" fbc:id="PP_4250" fbc:label="PP_4250"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4250"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4250"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746366.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F49"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1771" sboTerm="SBO:0000243" fbc:id="PP_1771" fbc:label="PP_1771"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1771"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1771"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743927.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M04"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4434" sboTerm="SBO:0000243" fbc:id="PP_4434" fbc:label="PP_4434"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4434"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4434"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746547.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5270" sboTerm="SBO:0000243" fbc:id="PP_5270" fbc:label="PP_5270"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5270"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5270"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747371.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CB1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2246" sboTerm="SBO:0000243" fbc:id="PP_2246" fbc:label="PP_2246"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2246"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2246"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744395.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KP4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2800" sboTerm="SBO:0000243" fbc:id="PP_2800" fbc:label="PP_2800"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2800"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2800"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744944.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J49"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4421" sboTerm="SBO:0000243" fbc:id="PP_4421" fbc:label="PP_4421"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4421"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4421"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746534.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EN3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4223" sboTerm="SBO:0000243" fbc:id="PP_4223" fbc:label="PP_4223"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4223"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4223"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746340.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F75"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2973" sboTerm="SBO:0000243" fbc:id="PP_2973" fbc:label="PP_2973"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2973"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2973"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745117.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1636" sboTerm="SBO:0000243" fbc:id="PP_1636" fbc:label="PP_1636"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1636"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1636"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743793.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MD7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4854" sboTerm="SBO:0000243" fbc:id="PP_4854" fbc:label="PP_4854"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4854"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4854"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746959.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DH1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4864" sboTerm="SBO:0000243" fbc:id="PP_4864" fbc:label="PP_4864"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4864"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4864"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746969.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DG1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4863" sboTerm="SBO:0000243" fbc:id="PP_4863" fbc:label="PP_4863"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4863"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4863"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746968.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DG2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4865" sboTerm="SBO:0000243" fbc:id="PP_4865" fbc:label="PP_4865"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4865"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4865"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746970.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DG0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4866" sboTerm="SBO:0000243" fbc:id="PP_4866" fbc:label="PP_4866"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4866"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4866"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746971.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DF9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4867" sboTerm="SBO:0000243" fbc:id="PP_4867" fbc:label="PP_4867"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4867"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4867"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746972.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DF8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5227" sboTerm="SBO:0000243" fbc:id="PP_5227" fbc:label="PP_5227"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5227"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5227"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747328.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CF4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2077" sboTerm="SBO:0000243" fbc:id="PP_2077" fbc:label="PP_2077"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2077"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2077"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744227.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L58"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5228" sboTerm="SBO:0000243" fbc:id="PP_5228" fbc:label="PP_5228"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5228"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5228"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747329.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CF3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3790" sboTerm="SBO:0000243" fbc:id="PP_3790" fbc:label="PP_3790"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3790"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3790"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745920.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GD4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1596" sboTerm="SBO:0000243" fbc:id="PP_1596" fbc:label="PP_1596"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1596"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1596"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743753.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MH5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3813" sboTerm="SBO:0000243" fbc:id="PP_3813" fbc:label="PP_3813"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3813"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3813"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745943.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GB1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0516" sboTerm="SBO:0000243" fbc:id="PP_0516" fbc:label="PP_0516"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0516"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0516"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742679.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QH7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0530" sboTerm="SBO:0000243" fbc:id="PP_0530" fbc:label="PP_0530"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0530"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0530"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742693.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QG4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0366" sboTerm="SBO:0000243" fbc:id="PP_0366" fbc:label="PP_0366"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0366"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0366"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742533.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QW8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1100" sboTerm="SBO:0000243" fbc:id="PP_1100" fbc:label="PP_1100"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1100"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1100"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743261.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2324" sboTerm="SBO:0000243" fbc:id="PP_2324" fbc:label="PP_2324"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2324"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2324"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744473.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KG6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3080" sboTerm="SBO:0000243" fbc:id="PP_3080" fbc:label="PP_3080"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3080"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3080"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745224.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IB9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1866" sboTerm="SBO:0000243" fbc:id="PP_1866" fbc:label="PP_1866"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1866"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1866"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744021.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LR3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0217" sboTerm="SBO:0000243" fbc:id="PP_0217" fbc:label="PP_0217"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0217"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0217"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742385.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RB6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5296" sboTerm="SBO:0000243" fbc:id="PP_5296" fbc:label="PP_5296"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5296"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5296"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747397.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C87"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3284" sboTerm="SBO:0000243" fbc:id="PP_3284" fbc:label="PP_3284"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3284"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3284"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745427.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HR9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5128" sboTerm="SBO:0000243" fbc:id="PP_5128" fbc:label="PP_5128"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5128"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5128"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747229.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CQ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4725" sboTerm="SBO:0000243" fbc:id="PP_4725" fbc:label="PP_4725"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4725"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4725"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746833.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DU4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1237" sboTerm="SBO:0000243" fbc:id="PP_1237" fbc:label="PP_1237"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1237"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1237"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743397.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5132" sboTerm="SBO:0000243" fbc:id="PP_5132" fbc:label="PP_5132"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5132"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5132"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747233.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CP8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1997" sboTerm="SBO:0000243" fbc:id="PP_1997" fbc:label="PP_1997"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1997"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1997"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744147.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LD8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4632" sboTerm="SBO:0000243" fbc:id="PP_4632" fbc:label="PP_4632"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4632"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4632"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746741.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E36"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2432" sboTerm="SBO:0000243" fbc:id="PP_2432" fbc:label="PP_2432"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2432"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2432"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744580.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K59"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0392" sboTerm="SBO:0000243" fbc:id="PP_0392" fbc:label="PP_0392"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0392"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0392"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742559.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QU4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2095" sboTerm="SBO:0000243" fbc:id="PP_2095" fbc:label="PP_2095"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2095"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2095"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744245.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1086" sboTerm="SBO:0000243" fbc:id="PP_1086" fbc:label="PP_1086"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1086"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1086"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743247.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NW7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4036" sboTerm="SBO:0000243" fbc:id="PP_4036" fbc:label="PP_4036"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4036"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4036"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_049588266.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FWK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4717" sboTerm="SBO:0000243" fbc:id="PP_4717" fbc:label="PP_4717"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4717"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4717"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746825.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DV2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2407" sboTerm="SBO:0000243" fbc:id="PP_2407" fbc:label="PP_2407"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2407"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2407"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744555.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K84"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0560" sboTerm="SBO:0000243" fbc:id="PP_0560" fbc:label="PP_0560"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0560"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0560"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742723.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QD4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3003" sboTerm="SBO:0000243" fbc:id="PP_3003" fbc:label="PP_3003"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3003"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3003"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745147.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IJ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5078" sboTerm="SBO:0000243" fbc:id="PP_5078" fbc:label="PP_5078"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5078"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5078"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747179.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CV2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2554" sboTerm="SBO:0000243" fbc:id="PP_2554" fbc:label="PP_2554"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2554"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2554"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744699.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JU3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2368" sboTerm="SBO:0000243" fbc:id="PP_2368" fbc:label="PP_2368"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2368"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2368"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744517.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KC2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3596" sboTerm="SBO:0000243" fbc:id="PP_3596" fbc:label="PP_3596"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3596"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3596"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745732.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3590" sboTerm="SBO:0000243" fbc:id="PP_3590" fbc:label="PP_3590"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3590"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3590"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745726.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0280" sboTerm="SBO:0000243" fbc:id="PP_0280" fbc:label="PP_0280"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0280"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0280"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742447.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R54"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0282" sboTerm="SBO:0000243" fbc:id="PP_0282" fbc:label="PP_0282"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0282"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0282"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742449.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R52"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3593" sboTerm="SBO:0000243" fbc:id="PP_3593" fbc:label="PP_3593"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3593"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3593"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745729.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3594" sboTerm="SBO:0000243" fbc:id="PP_3594" fbc:label="PP_3594"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3594"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3594"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745730.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3595" sboTerm="SBO:0000243" fbc:id="PP_3595" fbc:label="PP_3595"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3595"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3595"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745731.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3597" sboTerm="SBO:0000243" fbc:id="PP_3597" fbc:label="PP_3597"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3597"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3597"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745733.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0281" sboTerm="SBO:0000243" fbc:id="PP_0281" fbc:label="PP_0281"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0281"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0281"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742448.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R53"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0283" sboTerm="SBO:0000243" fbc:id="PP_0283" fbc:label="PP_0283"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0283"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0283"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742450.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R51"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0528" sboTerm="SBO:0000243" fbc:id="PP_0528" fbc:label="PP_0528"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0528"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0528"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742691.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QG6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0315" sboTerm="SBO:0000243" fbc:id="PP_0315" fbc:label="PP_0315"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0315"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0315"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742482.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R19"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0316" sboTerm="SBO:0000243" fbc:id="PP_0316" fbc:label="PP_0316"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0316"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0316"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742483.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R18"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0606" sboTerm="SBO:0000243" fbc:id="PP_0606" fbc:label="PP_0606"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0606"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0606"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742768.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q89"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1765" sboTerm="SBO:0000243" fbc:id="PP_1765" fbc:label="PP_1765"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1765"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1765"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743921.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3426" sboTerm="SBO:0000243" fbc:id="PP_3426" fbc:label="PP_3426"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3426"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3426"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745564.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HD4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3427" sboTerm="SBO:0000243" fbc:id="PP_3427" fbc:label="PP_3427"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3427"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3427"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745565.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HD3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3425" sboTerm="SBO:0000243" fbc:id="PP_3425" fbc:label="PP_3425"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3425"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3425"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745563.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HD5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3602" sboTerm="SBO:0000243" fbc:id="PP_3602" fbc:label="PP_3602"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3602"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3602"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745738.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GW5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1256" sboTerm="SBO:0000243" fbc:id="PP_1256" fbc:label="PP_1256"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1256"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1256"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743416.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NF5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0631" sboTerm="SBO:0000243" fbc:id="PP_0631" fbc:label="PP_0631"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0631"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0631"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742792.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q65"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2325" sboTerm="SBO:0000243" fbc:id="PP_2325" fbc:label="PP_2325"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2325"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2325"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744474.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KG5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1351" sboTerm="SBO:0000243" fbc:id="PP_1351" fbc:label="PP_1351"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1351"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1351"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743510.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N64"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2998" sboTerm="SBO:0000243" fbc:id="PP_2998" fbc:label="PP_2998"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2998"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2998"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745142.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0190" sboTerm="SBO:0000243" fbc:id="PP_0190" fbc:label="PP_0190"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0190"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0190"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742359.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59344"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0809" sboTerm="SBO:0000243" fbc:id="PP_0809" fbc:label="PP_0809"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0809"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0809"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742970.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59345"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0127" sboTerm="SBO:0000243" fbc:id="PP_0127" fbc:label="PP_0127"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0127"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0127"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742297.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1469" sboTerm="SBO:0000243" fbc:id="PP_1469" fbc:label="PP_1469"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1469"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1469"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743627.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MU9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4235" sboTerm="SBO:0000243" fbc:id="PP_4235" fbc:label="PP_4235"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4235"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4235"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746351.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F64"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0561" sboTerm="SBO:0000243" fbc:id="PP_0561" fbc:label="PP_0561"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0561"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0561"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742724.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QD3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4237" sboTerm="SBO:0000243" fbc:id="PP_4237" fbc:label="PP_4237"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4237"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4237"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746353.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F62"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4037" sboTerm="SBO:0000243" fbc:id="PP_4037" fbc:label="PP_4037"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4037"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4037"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746164.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FQ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4038" sboTerm="SBO:0000243" fbc:id="PP_4038" fbc:label="PP_4038"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4038"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4038"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746165.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FQ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5286" sboTerm="SBO:0000243" fbc:id="PP_5286" fbc:label="PP_5286"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5286"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5286"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747387.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1597" sboTerm="SBO:0000243" fbc:id="PP_1597" fbc:label="PP_1597"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1597"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1597"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743754.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MH4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0527" sboTerm="SBO:0000243" fbc:id="PP_0527" fbc:label="PP_0527"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0527"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0527"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742690.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QG7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4735" sboTerm="SBO:0000243" fbc:id="PP_4735" fbc:label="PP_4735"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4735"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4735"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746843.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DT4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4964" sboTerm="SBO:0000243" fbc:id="PP_4964" fbc:label="PP_4964"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4964"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4964"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747067.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D63"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2217" sboTerm="SBO:0000243" fbc:id="PP_2217" fbc:label="PP_2217"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2217"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2217"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744366.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2047" sboTerm="SBO:0000243" fbc:id="PP_2047" fbc:label="PP_2047"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2047"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2047"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744197.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L88"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4432" sboTerm="SBO:0000243" fbc:id="PP_4432" fbc:label="PP_4432"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4432"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4432"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746545.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4425" sboTerm="SBO:0000243" fbc:id="PP_4425" fbc:label="PP_4425"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4425"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4425"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746538.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4427" sboTerm="SBO:0000243" fbc:id="PP_4427" fbc:label="PP_4427"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4427"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4427"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746540.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4426" sboTerm="SBO:0000243" fbc:id="PP_4426" fbc:label="PP_4426"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4426"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4426"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746539.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4428" sboTerm="SBO:0000243" fbc:id="PP_4428" fbc:label="PP_4428"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4428"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4428"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746541.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1024" sboTerm="SBO:0000243" fbc:id="PP_1024" fbc:label="PP_1024"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1024"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1024"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743185.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P29"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1010" sboTerm="SBO:0000243" fbc:id="PP_1010" fbc:label="PP_1010"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1010"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1010"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743171.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P43"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0063" sboTerm="SBO:0000243" fbc:id="PP_0063" fbc:label="PP_0063"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0063"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0063"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742233.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RR6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1735" sboTerm="SBO:0000243" fbc:id="PP_1735" fbc:label="PP_1735"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1735"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1735"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743891.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1612" sboTerm="SBO:0000243" fbc:id="PP_1612" fbc:label="PP_1612"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1612"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1612"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743769.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MF9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0543" sboTerm="SBO:0000243" fbc:id="PP_0543" fbc:label="PP_0543"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0543"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0543"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742706.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QF1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0542" sboTerm="SBO:0000243" fbc:id="PP_0542" fbc:label="PP_0542"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0542"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0542"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742705.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QF2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0544" sboTerm="SBO:0000243" fbc:id="PP_0544" fbc:label="PP_0544"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0544"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0544"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742707.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QF0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0922" sboTerm="SBO:0000243" fbc:id="PP_0922" fbc:label="PP_0922"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0922"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0922"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743083.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PC8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4762" sboTerm="SBO:0000243" fbc:id="PP_4762" fbc:label="PP_4762"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4762"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4762"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746868.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DR1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0418" sboTerm="SBO:0000243" fbc:id="PP_0418" fbc:label="PP_0418"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0418"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0418"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742584.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2213" sboTerm="SBO:0000243" fbc:id="PP_2213" fbc:label="PP_2213"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2213"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2213"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744362.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KS6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2647" sboTerm="SBO:0000243" fbc:id="PP_2647" fbc:label="PP_2647"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2647"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2647"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744791.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3658" sboTerm="SBO:0000243" fbc:id="PP_3658" fbc:label="PP_3658"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3658"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3658"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745794.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GR0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4960" sboTerm="SBO:0000243" fbc:id="PP_4960" fbc:label="PP_4960"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4960"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4960"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747063.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D67"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4219" sboTerm="SBO:0000243" fbc:id="PP_4219" fbc:label="PP_4219"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4219"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4219"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746336.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F79"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4221" sboTerm="SBO:0000243" fbc:id="PP_4221" fbc:label="PP_4221"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4221"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4221"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746338.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F77"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4220" sboTerm="SBO:0000243" fbc:id="PP_4220" fbc:label="PP_4220"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4220"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4220"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746337.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F78"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4243" sboTerm="SBO:0000243" fbc:id="PP_4243" fbc:label="PP_4243"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4243"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4243"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746359.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F56"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4216" sboTerm="SBO:0000243" fbc:id="PP_4216" fbc:label="PP_4216"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4216"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4216"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746333.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F82"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5040" sboTerm="SBO:0000243" fbc:id="PP_5040" fbc:label="PP_5040"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5040"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5040"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747141.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CY9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0744" sboTerm="SBO:0000243" fbc:id="PP_0744" fbc:label="PP_0744"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0744"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0744"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742905.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0489" sboTerm="SBO:0000243" fbc:id="PP_0489" fbc:label="PP_0489"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0489"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0489"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_061405561.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FVZ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2186" sboTerm="SBO:0000243" fbc:id="PP_2186" fbc:label="PP_2186"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2186"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2186"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744335.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KV3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0490" sboTerm="SBO:0000243" fbc:id="PP_0490" fbc:label="PP_0490"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0490"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0490"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742655.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2184" sboTerm="SBO:0000243" fbc:id="PP_2184" fbc:label="PP_2184"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2184"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2184"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744333.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KV5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0492" sboTerm="SBO:0000243" fbc:id="PP_0492" fbc:label="PP_0492"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0492"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0492"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742657.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QJ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2183" sboTerm="SBO:0000243" fbc:id="PP_2183" fbc:label="PP_2183"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2183"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2183"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744332.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KV6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2185" sboTerm="SBO:0000243" fbc:id="PP_2185" fbc:label="PP_2185"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2185"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2185"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744334.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0491" sboTerm="SBO:0000243" fbc:id="PP_0491" fbc:label="PP_0491"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0491"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0491"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742656.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QK0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0238" sboTerm="SBO:0000243" fbc:id="PP_0238" fbc:label="PP_0238"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0238"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0238"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742406.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2765" sboTerm="SBO:0000243" fbc:id="PP_2765" fbc:label="PP_2765"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2765"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2765"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744909.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J84"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1638" sboTerm="SBO:0000243" fbc:id="PP_1638" fbc:label="PP_1638"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1638"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1638"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743795.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MD5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4646" sboTerm="SBO:0000243" fbc:id="PP_4646" fbc:label="PP_4646"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4646"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4646"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746755.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E22"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0847" sboTerm="SBO:0000243" fbc:id="PP_0847" fbc:label="PP_0847"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0847"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0847"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743008.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PK3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4628" sboTerm="SBO:0000243" fbc:id="PP_4628" fbc:label="PP_4628"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4628"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4628"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746737.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E40"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4613" sboTerm="SBO:0000243" fbc:id="PP_4613" fbc:label="PP_4613"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4613"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4613"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746722.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E55"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0867" sboTerm="SBO:0000243" fbc:id="PP_0867" fbc:label="PP_0867"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0867"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0867"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743028.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PI3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0535" sboTerm="SBO:0000243" fbc:id="PP_0535" fbc:label="PP_0535"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0535"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0535"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742698.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QF9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0669" sboTerm="SBO:0000243" fbc:id="PP_0669" fbc:label="PP_0669"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0669"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0669"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742830.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q29"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4217" sboTerm="SBO:0000243" fbc:id="PP_4217" fbc:label="PP_4217"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4217"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4217"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746334.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F81"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5195" sboTerm="SBO:0000243" fbc:id="PP_5195" fbc:label="PP_5195"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5195"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5195"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747296.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CI6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1078" sboTerm="SBO:0000243" fbc:id="PP_1078" fbc:label="PP_1078"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1078"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1078"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743239.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NX5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4882" sboTerm="SBO:0000243" fbc:id="PP_4882" fbc:label="PP_4882"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4882"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4882"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746986.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DE4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5196" sboTerm="SBO:0000243" fbc:id="PP_5196" fbc:label="PP_5196"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5196"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5196"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747297.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CI5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4881" sboTerm="SBO:0000243" fbc:id="PP_4881" fbc:label="PP_4881"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4881"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4881"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746985.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DE5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4755" sboTerm="SBO:0000243" fbc:id="PP_4755" fbc:label="PP_4755"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4755"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4755"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746861.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DR8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0350" sboTerm="SBO:0000243" fbc:id="PP_0350" fbc:label="PP_0350"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0350"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0350"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742517.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QY4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2242" sboTerm="SBO:0000243" fbc:id="PP_2242" fbc:label="PP_2242"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2242"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2242"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744391.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KP8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0160" sboTerm="SBO:0000243" fbc:id="PP_0160" fbc:label="PP_0160"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0160"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742329.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RH0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2205" sboTerm="SBO:0000243" fbc:id="PP_2205" fbc:label="PP_2205"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2205"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2205"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744354.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KT4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5380" sboTerm="SBO:0000243" fbc:id="PP_5380" fbc:label="PP_5380"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5380"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5380"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747481.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C03"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0067" sboTerm="SBO:0000243" fbc:id="PP_0067" fbc:label="PP_0067"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0067"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0067"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742237.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RR2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0602" sboTerm="SBO:0000243" fbc:id="PP_0602" fbc:label="PP_0602"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0602"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0602"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742764.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q93"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2764" sboTerm="SBO:0000243" fbc:id="PP_2764" fbc:label="PP_2764"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2764"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2764"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744908.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J85"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0236" sboTerm="SBO:0000243" fbc:id="PP_0236" fbc:label="PP_0236"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0236"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0236"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742404.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R97"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5036" sboTerm="SBO:0000243" fbc:id="PP_5036" fbc:label="PP_5036"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5036"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5036"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747137.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CZ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1156" sboTerm="SBO:0000243" fbc:id="PP_1156" fbc:label="PP_1156"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1156"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1156"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743317.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NP9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1625" sboTerm="SBO:0000243" fbc:id="PP_1625" fbc:label="PP_1625"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1625"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1625"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743782.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A122"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0794" sboTerm="SBO:0000243" fbc:id="PP_0794" fbc:label="PP_0794"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0794"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0794"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742955.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PQ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0795" sboTerm="SBO:0000243" fbc:id="PP_0795" fbc:label="PP_0795"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0795"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0795"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742956.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PQ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0793" sboTerm="SBO:0000243" fbc:id="PP_0793" fbc:label="PP_0793"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0793"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0793"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742954.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PQ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3570" sboTerm="SBO:0000243" fbc:id="PP_3570" fbc:label="PP_3570"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3570"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3570"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745707.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GZ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1445" sboTerm="SBO:0000243" fbc:id="PP_1445" fbc:label="PP_1445"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1445"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1445"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743603.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MX3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1019" sboTerm="SBO:0000243" fbc:id="PP_1019" fbc:label="PP_1019"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1019"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1019"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743180.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P34"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5203" sboTerm="SBO:0000243" fbc:id="PP_5203" fbc:label="PP_5203"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5203"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5203"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747304.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CH8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1367" sboTerm="SBO:0000243" fbc:id="PP_1367" fbc:label="PP_1367"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1367"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1367"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743526.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N49"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1943" sboTerm="SBO:0000243" fbc:id="PP_1943" fbc:label="PP_1943"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1943"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1943"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744095.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LI9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0327" sboTerm="SBO:0000243" fbc:id="PP_0327" fbc:label="PP_0327"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0327"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0327"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742494.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R07"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0897" sboTerm="SBO:0000243" fbc:id="PP_0897" fbc:label="PP_0897"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0897"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0897"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743058.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PF3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1755" sboTerm="SBO:0000243" fbc:id="PP_1755" fbc:label="PP_1755"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1755"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1755"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743911.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M20"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0944" sboTerm="SBO:0000243" fbc:id="PP_0944" fbc:label="PP_0944"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0944"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0944"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743105.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PA6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4620" sboTerm="SBO:0000243" fbc:id="PP_4620" fbc:label="PP_4620"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4620"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4620"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746729.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E48"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5411" sboTerm="SBO:0000243" fbc:id="PP_5411" fbc:label="PP_5411"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5411"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5411"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747511.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1783" sboTerm="SBO:0000243" fbc:id="PP_1783" fbc:label="PP_1783"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1783"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1783"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743939.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LZ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4784" sboTerm="SBO:0000243" fbc:id="PP_4784" fbc:label="PP_4784"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4784"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4784"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746889.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DP0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0838" sboTerm="SBO:0000243" fbc:id="PP_0838" fbc:label="PP_0838"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0838"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0838"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742999.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PL2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1520" sboTerm="SBO:0000243" fbc:id="PP_1520" fbc:label="PP_1520"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1520"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1520"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743677.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MQ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4169" sboTerm="SBO:0000243" fbc:id="PP_4169" fbc:label="PP_4169"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4169"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4169"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746286.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FC9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1073" sboTerm="SBO:0000243" fbc:id="PP_1073" fbc:label="PP_1073"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1073"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1073"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743234.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NY0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4811" sboTerm="SBO:0000243" fbc:id="PP_4811" fbc:label="PP_4811"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4811"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4811"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746916.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DL4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4042" sboTerm="SBO:0000243" fbc:id="PP_4042" fbc:label="PP_4042"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4042"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4042"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746168.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FP7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5351" sboTerm="SBO:0000243" fbc:id="PP_5351" fbc:label="PP_5351"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5351"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5351"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747452.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C32"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1022" sboTerm="SBO:0000243" fbc:id="PP_1022" fbc:label="PP_1022"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1022"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1022"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743183.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P31"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4701" sboTerm="SBO:0000243" fbc:id="PP_4701" fbc:label="PP_4701"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4701"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4701"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746810.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DW7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1808" sboTerm="SBO:0000243" fbc:id="PP_1808" fbc:label="PP_1808"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1808"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1808"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743963.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3384" sboTerm="SBO:0000243" fbc:id="PP_3384" fbc:label="PP_3384"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3384"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3384"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745524.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HH4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3383" sboTerm="SBO:0000243" fbc:id="PP_3383" fbc:label="PP_3383"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3383"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3383"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745523.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HH5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3382" sboTerm="SBO:0000243" fbc:id="PP_3382" fbc:label="PP_3382"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3382"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3382"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745522.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HH6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2518" sboTerm="SBO:0000243" fbc:id="PP_2518" fbc:label="PP_2518"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2518"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2518"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744666.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JX5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3601" sboTerm="SBO:0000243" fbc:id="PP_3601" fbc:label="PP_3601"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3601"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3601"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745737.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GW6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3600" sboTerm="SBO:0000243" fbc:id="PP_3600" fbc:label="PP_3600"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3600"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3600"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745736.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GW7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1710" sboTerm="SBO:0000243" fbc:id="PP_1710" fbc:label="PP_1710"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1710"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1710"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743867.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M64"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4758" sboTerm="SBO:0000243" fbc:id="PP_4758" fbc:label="PP_4758"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4758"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4758"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746864.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DR5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1171" sboTerm="SBO:0000243" fbc:id="PP_1171" fbc:label="PP_1171"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1171"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1171"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743331.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NN6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1168" sboTerm="SBO:0000243" fbc:id="PP_1168" fbc:label="PP_1168"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1168"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1168"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743328.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NN9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1167" sboTerm="SBO:0000243" fbc:id="PP_1167" fbc:label="PP_1167"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1167"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1167"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743327.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NP0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1169" sboTerm="SBO:0000243" fbc:id="PP_1169" fbc:label="PP_1169"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1169"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1169"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743329.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NN8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1173" sboTerm="SBO:0000243" fbc:id="PP_1173" fbc:label="PP_1173"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1173"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1173"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743333.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NN4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3821" sboTerm="SBO:0000243" fbc:id="PP_3821" fbc:label="PP_3821"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3821"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3821"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745951.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GA4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1009" sboTerm="SBO:0000243" fbc:id="PP_1009" fbc:label="PP_1009"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1009"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1009"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743170.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P44"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2149" sboTerm="SBO:0000243" fbc:id="PP_2149" fbc:label="PP_2149"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2149"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2149"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744298.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KZ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1664" sboTerm="SBO:0000243" fbc:id="PP_1664" fbc:label="PP_1664"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1664"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1664"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743821.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MB0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1457" sboTerm="SBO:0000243" fbc:id="PP_1457" fbc:label="PP_1457"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1457"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1457"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743615.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MW1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2517" sboTerm="SBO:0000243" fbc:id="PP_2517" fbc:label="PP_2517"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2517"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2517"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744665.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JX6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2519" sboTerm="SBO:0000243" fbc:id="PP_2519" fbc:label="PP_2519"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2519"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2519"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0311" sboTerm="SBO:0000243" fbc:id="PP_0311" fbc:label="PP_0311"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0311"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0311"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742478.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R23"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0310" sboTerm="SBO:0000243" fbc:id="PP_0310" fbc:label="PP_0310"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0310"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0310"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742477.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R24"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2676" sboTerm="SBO:0000243" fbc:id="PP_2676" fbc:label="PP_2676"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2676"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2676"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744820.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JH3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2673" sboTerm="SBO:0000243" fbc:id="PP_2673" fbc:label="PP_2673"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2673"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2673"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744817.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JH6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5302" sboTerm="SBO:0000243" fbc:id="PP_5302" fbc:label="PP_5302"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5302"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5302"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747403.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C81"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1656" sboTerm="SBO:0000243" fbc:id="PP_1656" fbc:label="PP_1656"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1656"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1656"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743813.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MB8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1288" sboTerm="SBO:0000243" fbc:id="PP_1288" fbc:label="PP_1288"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1288"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1288"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743448.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NC4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5409" sboTerm="SBO:0000243" fbc:id="PP_5409" fbc:label="PP_5409"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5409"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5409"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747509.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88BX8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5298" sboTerm="SBO:0000243" fbc:id="PP_5298" fbc:label="PP_5298"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5298"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5298"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747399.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C85"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2179" sboTerm="SBO:0000243" fbc:id="PP_2179" fbc:label="PP_2179"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2179"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2179"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744328.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KW0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3598" sboTerm="SBO:0000243" fbc:id="PP_3598" fbc:label="PP_3598"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3598"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3598"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745734.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1842" sboTerm="SBO:0000243" fbc:id="PP_1842" fbc:label="PP_1842"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1842"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1842"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743997.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LT5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4548" sboTerm="SBO:0000243" fbc:id="PP_4548" fbc:label="PP_4548"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4548"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4548"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746657.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EB8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3146" sboTerm="SBO:0000243" fbc:id="PP_3146" fbc:label="PP_3146"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3146"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3146"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745290.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I55"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5273" sboTerm="SBO:0000243" fbc:id="PP_5273" fbc:label="PP_5273"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5273"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5273"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747374.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CA8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2448" sboTerm="SBO:0000243" fbc:id="PP_2448" fbc:label="PP_2448"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2448"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2448"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744596.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K44"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4020" sboTerm="SBO:0000243" fbc:id="PP_4020" fbc:label="PP_4020"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4020"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4020"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746150.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FR3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5183" sboTerm="SBO:0000243" fbc:id="PP_5183" fbc:label="PP_5183"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5183"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5183"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747284.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CJ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5299" sboTerm="SBO:0000243" fbc:id="PP_5299" fbc:label="PP_5299"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5299"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5299"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747400.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C84"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5184" sboTerm="SBO:0000243" fbc:id="PP_5184" fbc:label="PP_5184"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5184"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5184"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747285.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CJ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4547" sboTerm="SBO:0000243" fbc:id="PP_4547" fbc:label="PP_4547"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4547"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4547"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746656.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EB9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2178" sboTerm="SBO:0000243" fbc:id="PP_2178" fbc:label="PP_2178"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2178"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2178"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744327.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KW1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4399" sboTerm="SBO:0000243" fbc:id="PP_4399" fbc:label="PP_4399"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4399"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4399"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746513.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EQ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3148" sboTerm="SBO:0000243" fbc:id="PP_3148" fbc:label="PP_3148"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3148"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3148"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745292.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I53"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0671" sboTerm="SBO:0000243" fbc:id="PP_0671" fbc:label="PP_0671"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0671"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0671"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742832.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q27"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0322" sboTerm="SBO:0000243" fbc:id="PP_0322" fbc:label="PP_0322"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0322"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0322"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742489.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4058" sboTerm="SBO:0000243" fbc:id="PP_4058" fbc:label="PP_4058"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4058"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4058"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746184.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FN1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1444" sboTerm="SBO:0000243" fbc:id="PP_1444" fbc:label="PP_1444"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1444"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1444"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743602.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0652" sboTerm="SBO:0000243" fbc:id="PP_0652" fbc:label="PP_0652"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0652"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0652"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742813.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q46"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3417" sboTerm="SBO:0000243" fbc:id="PP_3417" fbc:label="PP_3417"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3417"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3417"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745555.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HE3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5041" sboTerm="SBO:0000243" fbc:id="PP_5041" fbc:label="PP_5041"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5041"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5041"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747142.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CY8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4757" sboTerm="SBO:0000243" fbc:id="PP_4757" fbc:label="PP_4757"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4757"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4757"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746863.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DR6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4050" sboTerm="SBO:0000243" fbc:id="PP_4050" fbc:label="PP_4050"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4050"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4050"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746176.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FN9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1016" sboTerm="SBO:0000243" fbc:id="PP_1016" fbc:label="PP_1016"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1016"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1016"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743177.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P37"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1015" sboTerm="SBO:0000243" fbc:id="PP_1015" fbc:label="PP_1015"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1015"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1015"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743176.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P38"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1017" sboTerm="SBO:0000243" fbc:id="PP_1017" fbc:label="PP_1017"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1017"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1017"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743178.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P36"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1018" sboTerm="SBO:0000243" fbc:id="PP_1018" fbc:label="PP_1018"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1018"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1018"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743179.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P35"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4055" sboTerm="SBO:0000243" fbc:id="PP_4055" fbc:label="PP_4055"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4055"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4055"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746181.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FN4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5046" sboTerm="SBO:0000243" fbc:id="PP_5046" fbc:label="PP_5046"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5046"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5046"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747147.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CY3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0931" sboTerm="SBO:0000243" fbc:id="PP_0931" fbc:label="PP_0931"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0931"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0931"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743092.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PB9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0930" sboTerm="SBO:0000243" fbc:id="PP_0930" fbc:label="PP_0930"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0930"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0930"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743091.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PC0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0932" sboTerm="SBO:0000243" fbc:id="PP_0932" fbc:label="PP_0932"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0932"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0932"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743093.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PB8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2904" sboTerm="SBO:0000243" fbc:id="PP_2904" fbc:label="PP_2904"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2904"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2904"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745048.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IU5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0691" sboTerm="SBO:0000243" fbc:id="PP_0691" fbc:label="PP_0691"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0691"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0691"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742852.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q07"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0243" sboTerm="SBO:0000243" fbc:id="PP_0243" fbc:label="PP_0243"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0243"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0243"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742411.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R90"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2080" sboTerm="SBO:0000243" fbc:id="PP_2080" fbc:label="PP_2080"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2080"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2080"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744230.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L55"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0675" sboTerm="SBO:0000243" fbc:id="PP_0675" fbc:label="PP_0675"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0675"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0675"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742836.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q23"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2000" sboTerm="SBO:0000243" fbc:id="PP_2000" fbc:label="PP_2000"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2000"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2000"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744150.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LD5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0736" sboTerm="SBO:0000243" fbc:id="PP_0736" fbc:label="PP_0736"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0736"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0736"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742897.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PW2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5076" sboTerm="SBO:0000243" fbc:id="PP_5076" fbc:label="PP_5076"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5076"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5076"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747177.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5075" sboTerm="SBO:0000243" fbc:id="PP_5075" fbc:label="PP_5075"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5075"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5075"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747176.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CV5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0158" sboTerm="SBO:0000243" fbc:id="PP_0158" fbc:label="PP_0158"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0158"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0158"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742327.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0732" sboTerm="SBO:0000243" fbc:id="PP_0732" fbc:label="PP_0732"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0732"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0732"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742893.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PW6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1977" sboTerm="SBO:0000243" fbc:id="PP_1977" fbc:label="PP_1977"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1977"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1977"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744128.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LF6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0996" sboTerm="SBO:0000243" fbc:id="PP_0996" fbc:label="PP_0996"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0996"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0996"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743157.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P57"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4297" sboTerm="SBO:0000243" fbc:id="PP_4297" fbc:label="PP_4297"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4297"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4297"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746413.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F03"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1076" sboTerm="SBO:0000243" fbc:id="PP_1076" fbc:label="PP_1076"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1076"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1076"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743237.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NX7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1741" sboTerm="SBO:0000243" fbc:id="PP_1741" fbc:label="PP_1741"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1741"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1741"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743897.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M34"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2914" sboTerm="SBO:0000243" fbc:id="PP_2914" fbc:label="PP_2914"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2914"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2914"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745058.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IT5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3178" sboTerm="SBO:0000243" fbc:id="PP_3178" fbc:label="PP_3178"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3178"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3178"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745322.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I24"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5192" sboTerm="SBO:0000243" fbc:id="PP_5192" fbc:label="PP_5192"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5192"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5192"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747293.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CI9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0986" sboTerm="SBO:0000243" fbc:id="PP_0986" fbc:label="PP_0986"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0986"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0986"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743147.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P67"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5194" sboTerm="SBO:0000243" fbc:id="PP_5194" fbc:label="PP_5194"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5194"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5194"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747295.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CI7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0988" sboTerm="SBO:0000243" fbc:id="PP_0988" fbc:label="PP_0988"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0988"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0988"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743149.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P65"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0989" sboTerm="SBO:0000243" fbc:id="PP_0989" fbc:label="PP_0989"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0989"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0989"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743150.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P64"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5193" sboTerm="SBO:0000243" fbc:id="PP_5193" fbc:label="PP_5193"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5193"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5193"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747294.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CI8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0762" sboTerm="SBO:0000243" fbc:id="PP_0762" fbc:label="PP_0762"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0762"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0762"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742923.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PT6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4300" sboTerm="SBO:0000243" fbc:id="PP_4300" fbc:label="PP_4300"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4300"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4300"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746416.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F00"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2679" sboTerm="SBO:0000243" fbc:id="PP_2679" fbc:label="PP_2679"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2679"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2679"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744823.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JH0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3745" sboTerm="SBO:0000243" fbc:id="PP_3745" fbc:label="PP_3745"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3745"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3745"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745876.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GH8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3747" sboTerm="SBO:0000243" fbc:id="PP_3747" fbc:label="PP_3747"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3747"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3747"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745878.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GH6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3746" sboTerm="SBO:0000243" fbc:id="PP_3746" fbc:label="PP_3746"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3746"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3746"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745877.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GH7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1075" sboTerm="SBO:0000243" fbc:id="PP_1075" fbc:label="PP_1075"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1075"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1075"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743236.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NX8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0612" sboTerm="SBO:0000243" fbc:id="PP_0612" fbc:label="PP_0612"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0612"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0612"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742774.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q83"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4144" sboTerm="SBO:0000243" fbc:id="PP_4144" fbc:label="PP_4144"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4144"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4144"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746262.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FF3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0060" sboTerm="SBO:0000243" fbc:id="PP_0060" fbc:label="PP_0060"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0060"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0060"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742230.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RR9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0061" sboTerm="SBO:0000243" fbc:id="PP_0061" fbc:label="PP_0061"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0061"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0061"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742231.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RR8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1799" sboTerm="SBO:0000243" fbc:id="PP_1799" fbc:label="PP_1799"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1799"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1799"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743954.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4934" sboTerm="SBO:0000243" fbc:id="PP_4934" fbc:label="PP_4934"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4934"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4934"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747037.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D93"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0059" sboTerm="SBO:0000243" fbc:id="PP_0059" fbc:label="PP_0059"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0059"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0059"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742229.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RS0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1032" sboTerm="SBO:0000243" fbc:id="PP_1032" fbc:label="PP_1032"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1032"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1032"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743193.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P21"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4043" sboTerm="SBO:0000243" fbc:id="PP_4043" fbc:label="PP_4043"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4043"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4043"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746169.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FP6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3416" sboTerm="SBO:0000243" fbc:id="PP_3416" fbc:label="PP_3416"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3416"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3416"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745554.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HE4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2152" sboTerm="SBO:0000243" fbc:id="PP_2152" fbc:label="PP_2152"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2152"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2152"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744301.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KY7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3819" sboTerm="SBO:0000243" fbc:id="PP_3819" fbc:label="PP_3819"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3819"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3819"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745949.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GA5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0777" sboTerm="SBO:0000243" fbc:id="PP_0777" fbc:label="PP_0777"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0777"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0777"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742938.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1686" sboTerm="SBO:0000243" fbc:id="PP_1686" fbc:label="PP_1686"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1686"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1686"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743843.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M88"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1874" sboTerm="SBO:0000243" fbc:id="PP_1874" fbc:label="PP_1874"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1874"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1874"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744029.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LQ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3535" sboTerm="SBO:0000243" fbc:id="PP_3535" fbc:label="PP_3535"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3535"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3535"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745672.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H30"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4659" sboTerm="SBO:0000243" fbc:id="PP_4659" fbc:label="PP_4659"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4659"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4659"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746768.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E09"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4993" sboTerm="SBO:0000243" fbc:id="PP_4993" fbc:label="PP_4993"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4993"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4993"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747095.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D35"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1823" sboTerm="SBO:0000243" fbc:id="PP_1823" fbc:label="PP_1823"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1823"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1823"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743978.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2512" sboTerm="SBO:0000243" fbc:id="PP_2512" fbc:label="PP_2512"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2512"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2512"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744660.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JY1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3324" sboTerm="SBO:0000243" fbc:id="PP_3324" fbc:label="PP_3324"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3324"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3324"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745467.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HM9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0522" sboTerm="SBO:0000243" fbc:id="PP_0522" fbc:label="PP_0522"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0522"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0522"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742685.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QH1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5216" sboTerm="SBO:0000243" fbc:id="PP_5216" fbc:label="PP_5216"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5216"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5216"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747317.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CG5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0343" sboTerm="SBO:0000243" fbc:id="PP_0343" fbc:label="PP_0343"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0343"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0343"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742510.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QZ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4943" sboTerm="SBO:0000243" fbc:id="PP_4943" fbc:label="PP_4943"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4943"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4943"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747046.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D84"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4405" sboTerm="SBO:0000243" fbc:id="PP_4405" fbc:label="PP_4405"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4405"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4405"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746519.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EP8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0129" sboTerm="SBO:0000243" fbc:id="PP_0129" fbc:label="PP_0129"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0129"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0129"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742299.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RK0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1494" sboTerm="SBO:0000243" fbc:id="PP_1494" fbc:label="PP_1494"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1494"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1494"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743652.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MS4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4670" sboTerm="SBO:0000243" fbc:id="PP_4670" fbc:label="PP_4670"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4670"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4670"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746779.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DZ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0165" sboTerm="SBO:0000243" fbc:id="PP_0165" fbc:label="PP_0165"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0165"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0165"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742334.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RG5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3581" sboTerm="SBO:0000243" fbc:id="PP_3581" fbc:label="PP_3581"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3581"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3581"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745718.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GY4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4281" sboTerm="SBO:0000243" fbc:id="PP_4281" fbc:label="PP_4281"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4281"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4281"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746397.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F18"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0747" sboTerm="SBO:0000243" fbc:id="PP_0747" fbc:label="PP_0747"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0747"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0747"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742908.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PV1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4290" sboTerm="SBO:0000243" fbc:id="PP_4290" fbc:label="PP_4290"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4290"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4290"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746406.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4284" sboTerm="SBO:0000243" fbc:id="PP_4284" fbc:label="PP_4284"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4284"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4284"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746400.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F15"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4523" sboTerm="SBO:0000243" fbc:id="PP_4523" fbc:label="PP_4523"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4523"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4523"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746633.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EE2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0100" sboTerm="SBO:0000243" fbc:id="PP_0100" fbc:label="PP_0100"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0100"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0100"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742270.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RM9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4282" sboTerm="SBO:0000243" fbc:id="PP_4282" fbc:label="PP_4282"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4282"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4282"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746398.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F17"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2214" sboTerm="SBO:0000243" fbc:id="PP_2214" fbc:label="PP_2214"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2214"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2214"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744363.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KS5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3755" sboTerm="SBO:0000243" fbc:id="PP_3755" fbc:label="PP_3755"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3755"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3755"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745885.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GG9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3282" sboTerm="SBO:0000243" fbc:id="PP_3282" fbc:label="PP_3282"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3282"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3282"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745425.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5318" sboTerm="SBO:0000243" fbc:id="PP_5318" fbc:label="PP_5318"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5318"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5318"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747419.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C65"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0110" sboTerm="SBO:0000243" fbc:id="PP_0110" fbc:label="PP_0110"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0110"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0110"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742280.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RL9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0816" sboTerm="SBO:0000243" fbc:id="PP_0816" fbc:label="PP_0816"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0816"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0816"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742977.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PN3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4944" sboTerm="SBO:0000243" fbc:id="PP_4944" fbc:label="PP_4944"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4944"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4944"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747047.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D83"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0344" sboTerm="SBO:0000243" fbc:id="PP_0344" fbc:label="PP_0344"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0344"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0344"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742511.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QZ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0345" sboTerm="SBO:0000243" fbc:id="PP_0345" fbc:label="PP_0345"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0345"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0345"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742512.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QY9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0346" sboTerm="SBO:0000243" fbc:id="PP_0346" fbc:label="PP_0346"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0346"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0346"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742513.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QY8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0342" sboTerm="SBO:0000243" fbc:id="PP_0342" fbc:label="PP_0342"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0342"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0342"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742509.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QZ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0341" sboTerm="SBO:0000243" fbc:id="PP_0341" fbc:label="PP_0341"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0341"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0341"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742508.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QZ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1011" sboTerm="SBO:0000243" fbc:id="PP_1011" fbc:label="PP_1011"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1011"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1011"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743172.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P42"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4621" sboTerm="SBO:0000243" fbc:id="PP_4621" fbc:label="PP_4621"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4621"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4621"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746730.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E47"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4666" sboTerm="SBO:0000243" fbc:id="PP_4666" fbc:label="PP_4666"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4666"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4666"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746775.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E02"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5032" sboTerm="SBO:0000243" fbc:id="PP_5032" fbc:label="PP_5032"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5032"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5032"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747133.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CZ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0966" sboTerm="SBO:0000243" fbc:id="PP_0966" fbc:label="PP_0966"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0966"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0966"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743127.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59400"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0854" sboTerm="SBO:0000243" fbc:id="PP_0854" fbc:label="PP_0854"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0854"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0854"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743015.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PJ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0927" sboTerm="SBO:0000243" fbc:id="PP_0927" fbc:label="PP_0927"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0927"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0927"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743088.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PC3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4492" sboTerm="SBO:0000243" fbc:id="PP_4492" fbc:label="PP_4492"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4492"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4492"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746603.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EH1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0799" sboTerm="SBO:0000243" fbc:id="PP_0799" fbc:label="PP_0799"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0799"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0799"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742960.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PP9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4285" sboTerm="SBO:0000243" fbc:id="PP_4285" fbc:label="PP_4285"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4285"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4285"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746401.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F14"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0186" sboTerm="SBO:0000243" fbc:id="PP_0186" fbc:label="PP_0186"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0186"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0186"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742355.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RE5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3540" sboTerm="SBO:0000243" fbc:id="PP_3540" fbc:label="PP_3540"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3540"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3540"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745677.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H25"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4782" sboTerm="SBO:0000243" fbc:id="PP_4782" fbc:label="PP_4782"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4782"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4782"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746887.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DP2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_096" sboTerm="SBO:0000243" fbc:id="pWW0_096" fbc:label="pWW0_096"/> <fbc:geneProduct metaid="pWW0_095" sboTerm="SBO:0000243" fbc:id="pWW0_095" fbc:label="pWW0_095"/> <fbc:geneProduct metaid="PP_2239" sboTerm="SBO:0000243" fbc:id="PP_2239" fbc:label="PP_2239"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2239"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2239"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744388.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KQ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_092" sboTerm="SBO:0000243" fbc:id="pWW0_092" fbc:label="pWW0_092"/> <fbc:geneProduct metaid="PP_2582" sboTerm="SBO:0000243" fbc:id="PP_2582" fbc:label="PP_2582"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2582"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2582"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744726.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JR7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1005" sboTerm="SBO:0000243" fbc:id="PP_1005" fbc:label="PP_1005"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1005"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1005"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743166.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P48"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4698" sboTerm="SBO:0000243" fbc:id="PP_4698" fbc:label="PP_4698"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4698"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4698"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746807.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DX0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0393" sboTerm="SBO:0000243" fbc:id="PP_0393" fbc:label="PP_0393"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0393"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0393"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742560.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QU3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4298" sboTerm="SBO:0000243" fbc:id="PP_4298" fbc:label="PP_4298"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4298"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4298"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746414.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F02"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1470" sboTerm="SBO:0000243" fbc:id="PP_1470" fbc:label="PP_1470"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1470"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1470"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743628.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MU8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0664" sboTerm="SBO:0000243" fbc:id="PP_0664" fbc:label="PP_0664"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0664"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0664"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742825.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q34"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5097" sboTerm="SBO:0000243" fbc:id="PP_5097" fbc:label="PP_5097"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5097"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5097"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747198.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5098" sboTerm="SBO:0000243" fbc:id="PP_5098" fbc:label="PP_5098"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5098"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5098"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747199.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0121" sboTerm="SBO:0000243" fbc:id="PP_0121" fbc:label="PP_0121"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0121"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0121"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742291.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RK8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0967" sboTerm="SBO:0000243" fbc:id="PP_0967" fbc:label="PP_0967"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0967"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0967"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743128.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P86"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4279" sboTerm="SBO:0000243" fbc:id="PP_4279" fbc:label="PP_4279"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4279"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4279"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746395.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F20"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4278" sboTerm="SBO:0000243" fbc:id="PP_4278" fbc:label="PP_4278"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4278"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4278"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746394.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F21"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1673" sboTerm="SBO:0000243" fbc:id="PP_1673" fbc:label="PP_1673"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1673"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1673"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743830.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MA1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0843" sboTerm="SBO:0000243" fbc:id="PP_0843" fbc:label="PP_0843"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0843"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0843"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743004.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PK7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2435" sboTerm="SBO:0000243" fbc:id="PP_2435" fbc:label="PP_2435"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2435"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2435"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744583.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K56"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0842" sboTerm="SBO:0000243" fbc:id="PP_0842" fbc:label="PP_0842"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0842"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0842"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743003.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PK8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0844" sboTerm="SBO:0000243" fbc:id="PP_0844" fbc:label="PP_0844"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0844"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0844"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743005.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PK6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4011" sboTerm="SBO:0000243" fbc:id="PP_4011" fbc:label="PP_4011"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4011"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4011"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746141.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4012" sboTerm="SBO:0000243" fbc:id="PP_4012" fbc:label="PP_4012"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4012"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4012"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746142.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FS1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4116" sboTerm="SBO:0000243" fbc:id="PP_4116" fbc:label="PP_4116"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4116"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4116"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746235.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0293" sboTerm="SBO:0000243" fbc:id="PP_0293" fbc:label="PP_0293"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0293"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0293"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742460.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R41"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0290" sboTerm="SBO:0000243" fbc:id="PP_0290" fbc:label="PP_0290"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0290"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0290"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742457.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R44"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0289" sboTerm="SBO:0000243" fbc:id="PP_0289" fbc:label="PP_0289"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0289"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0289"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742456.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R45"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0422" sboTerm="SBO:0000243" fbc:id="PP_0422" fbc:label="PP_0422"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0422"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0422"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742588.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QR6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4617" sboTerm="SBO:0000243" fbc:id="PP_4617" fbc:label="PP_4617"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4617"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4617"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746726.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E51"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3511" sboTerm="SBO:0000243" fbc:id="PP_3511" fbc:label="PP_3511"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3511"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3511"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745648.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H54"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0603" sboTerm="SBO:0000243" fbc:id="PP_0603" fbc:label="PP_0603"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0603"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0603"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742765.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q92"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4184" sboTerm="SBO:0000243" fbc:id="PP_4184" fbc:label="PP_4184"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4184"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4184"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746301.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FB4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1031" sboTerm="SBO:0000243" fbc:id="PP_1031" fbc:label="PP_1031"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1031"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1031"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743192.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P22"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3561" sboTerm="SBO:0000243" fbc:id="PP_3561" fbc:label="PP_3561"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3561"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3561"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745698.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H04"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0926" sboTerm="SBO:0000243" fbc:id="PP_0926" fbc:label="PP_0926"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0926"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0926"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743087.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PC4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0565" sboTerm="SBO:0000243" fbc:id="PP_0565" fbc:label="PP_0565"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0565"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0565"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742728.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QC9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1988" sboTerm="SBO:0000243" fbc:id="PP_1988" fbc:label="PP_1988"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1988"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1988"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744139.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LE5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1986" sboTerm="SBO:0000243" fbc:id="PP_1986" fbc:label="PP_1986"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1986"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1986"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744137.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LE7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1985" sboTerm="SBO:0000243" fbc:id="PP_1985" fbc:label="PP_1985"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1985"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1985"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744136.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LE8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1025" sboTerm="SBO:0000243" fbc:id="PP_1025" fbc:label="PP_1025"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1025"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1025"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743186.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P28"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4063" sboTerm="SBO:0000243" fbc:id="PP_4063" fbc:label="PP_4063"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4063"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4063"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746189.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5030" sboTerm="SBO:0000243" fbc:id="PP_5030" fbc:label="PP_5030"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5030"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5030"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747131.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CZ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4678" sboTerm="SBO:0000243" fbc:id="PP_4678" fbc:label="PP_4678"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4678"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4678"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746787.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DZ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4545" sboTerm="SBO:0000243" fbc:id="PP_4545" fbc:label="PP_4545"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4545"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4545"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746654.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EC1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4379" sboTerm="SBO:0000243" fbc:id="PP_4379" fbc:label="PP_4379"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4379"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4379"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746493.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88ES4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2137" sboTerm="SBO:0000243" fbc:id="PP_2137" fbc:label="PP_2137"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2137"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2137"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744286.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L01"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2215" sboTerm="SBO:0000243" fbc:id="PP_2215" fbc:label="PP_2215"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2215"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2215"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744364.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KS4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1902" sboTerm="SBO:0000243" fbc:id="PP_1902" fbc:label="PP_1902"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1902"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1902"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744057.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LM7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0956" sboTerm="SBO:0000243" fbc:id="PP_0956" fbc:label="PP_0956"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0956"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0956"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743117.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1807" sboTerm="SBO:0000243" fbc:id="PP_1807" fbc:label="PP_1807"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1807"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1807"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743962.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1611" sboTerm="SBO:0000243" fbc:id="PP_1611" fbc:label="PP_1611"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1611"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1611"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743768.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MG0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4160" sboTerm="SBO:0000243" fbc:id="PP_4160" fbc:label="PP_4160"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4160"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4160"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_049588226.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FWL1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4161" sboTerm="SBO:0000243" fbc:id="PP_4161" fbc:label="PP_4161"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4161"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4161"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746278.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FD7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4159" sboTerm="SBO:0000243" fbc:id="PP_4159" fbc:label="PP_4159"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4159"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4159"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746277.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FD8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4507" sboTerm="SBO:0000243" fbc:id="PP_4507" fbc:label="PP_4507"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4507"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4507"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746617.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EF8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1200" sboTerm="SBO:0000243" fbc:id="PP_1200" fbc:label="PP_1200"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1200"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1200"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743360.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NK7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3953" sboTerm="SBO:0000243" fbc:id="PP_3953" fbc:label="PP_3953"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3953"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3953"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746083.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0065" sboTerm="SBO:0000243" fbc:id="PP_0065" fbc:label="PP_0065"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0065"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0065"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742235.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RR4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5246" sboTerm="SBO:0000243" fbc:id="PP_5246" fbc:label="PP_5246"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5246"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5246"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747347.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CD5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3311" sboTerm="SBO:0000243" fbc:id="PP_3311" fbc:label="PP_3311"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3311"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3311"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745454.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HP2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2225" sboTerm="SBO:0000243" fbc:id="PP_2225" fbc:label="PP_2225"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2225"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2225"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744374.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KR5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2228" sboTerm="SBO:0000243" fbc:id="PP_2228" fbc:label="PP_2228"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2228"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2228"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744377.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KR2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2226" sboTerm="SBO:0000243" fbc:id="PP_2226" fbc:label="PP_2226"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2226"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2226"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744375.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KR4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0713" sboTerm="SBO:0000243" fbc:id="PP_0713" fbc:label="PP_0713"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0713"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0713"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742874.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PY5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5066" sboTerm="SBO:0000243" fbc:id="PP_5066" fbc:label="PP_5066"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5066"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5066"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747167.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CW4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2230" sboTerm="SBO:0000243" fbc:id="PP_2230" fbc:label="PP_2230"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2230"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2230"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744379.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KR0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2229" sboTerm="SBO:0000243" fbc:id="PP_2229" fbc:label="PP_2229"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2229"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2229"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744378.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KR1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2227" sboTerm="SBO:0000243" fbc:id="PP_2227" fbc:label="PP_2227"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2227"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2227"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744376.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KR3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1649" sboTerm="SBO:0000243" fbc:id="PP_1649" fbc:label="PP_1649"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1649"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1649"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743806.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MC4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4737" sboTerm="SBO:0000243" fbc:id="PP_4737" fbc:label="PP_4737"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4737"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4737"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746845.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4794" sboTerm="SBO:0000243" fbc:id="PP_4794" fbc:label="PP_4794"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4794"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4794"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746899.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DN1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3766" sboTerm="SBO:0000243" fbc:id="PP_3766" fbc:label="PP_3766"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3766"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3766"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745896.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GF8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4570" sboTerm="SBO:0000243" fbc:id="PP_4570" fbc:label="PP_4570"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4570"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4570"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746679.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2423" sboTerm="SBO:0000243" fbc:id="PP_2423" fbc:label="PP_2423"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2423"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2423"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744571.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K68"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4801" sboTerm="SBO:0000243" fbc:id="PP_4801" fbc:label="PP_4801"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4801"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4801"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746906.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DM4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4800" sboTerm="SBO:0000243" fbc:id="PP_4800" fbc:label="PP_4800"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4800"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4800"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746905.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1604" sboTerm="SBO:0000243" fbc:id="PP_1604" fbc:label="PP_1604"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1604"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1604"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743761.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MG7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5257" sboTerm="SBO:0000243" fbc:id="PP_5257" fbc:label="PP_5257"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5257"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5257"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747358.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CC4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2318" sboTerm="SBO:0000243" fbc:id="PP_2318" fbc:label="PP_2318"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2318"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2318"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744467.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4140" sboTerm="SBO:0000243" fbc:id="PP_4140" fbc:label="PP_4140"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4140"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4140"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_049588234.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FWL0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0383" sboTerm="SBO:0000243" fbc:id="PP_0383" fbc:label="PP_0383"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0383"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0383"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742550.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QV1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4736" sboTerm="SBO:0000243" fbc:id="PP_4736" fbc:label="PP_4736"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4736"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4736"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746844.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4619" sboTerm="SBO:0000243" fbc:id="PP_4619" fbc:label="PP_4619"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4619"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4619"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746728.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E49"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4059" sboTerm="SBO:0000243" fbc:id="PP_4059" fbc:label="PP_4059"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4059"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4059"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746185.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FN0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0365" sboTerm="SBO:0000243" fbc:id="PP_0365" fbc:label="PP_0365"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0365"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0365"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742532.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3942" sboTerm="SBO:0000243" fbc:id="PP_3942" fbc:label="PP_3942"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3942"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3942"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746072.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FY4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0356" sboTerm="SBO:0000243" fbc:id="PP_0356" fbc:label="PP_0356"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0356"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0356"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742523.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QX8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4060" sboTerm="SBO:0000243" fbc:id="PP_4060" fbc:label="PP_4060"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4060"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4060"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746186.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FM9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2056" sboTerm="SBO:0000243" fbc:id="PP_2056" fbc:label="PP_2056"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2056"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2056"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744206.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L79"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2255" sboTerm="SBO:0000243" fbc:id="PP_2255" fbc:label="PP_2255"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2255"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2255"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744404.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KN5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1277" sboTerm="SBO:0000243" fbc:id="PP_1277" fbc:label="PP_1277"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1277"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1277"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743437.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88ND5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1776" sboTerm="SBO:0000243" fbc:id="PP_1776" fbc:label="PP_1776"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1776"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1776"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743932.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M00"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1014" sboTerm="SBO:0000243" fbc:id="PP_1014" fbc:label="PP_1014"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1014"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1014"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743175.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P39"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4064" sboTerm="SBO:0000243" fbc:id="PP_4064" fbc:label="PP_4064"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4064"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4064"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746190.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4065" sboTerm="SBO:0000243" fbc:id="PP_4065" fbc:label="PP_4065"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4065"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4065"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746191.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FM4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4067" sboTerm="SBO:0000243" fbc:id="PP_4067" fbc:label="PP_4067"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4067"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4067"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746193.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FM2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2338" sboTerm="SBO:0000243" fbc:id="PP_2338" fbc:label="PP_2338"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2338"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2338"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744487.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KF2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2334" sboTerm="SBO:0000243" fbc:id="PP_2334" fbc:label="PP_2334"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2334"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2334"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744483.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KF6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2335" sboTerm="SBO:0000243" fbc:id="PP_2335" fbc:label="PP_2335"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2335"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2335"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744484.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KF5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1913" sboTerm="SBO:0000243" fbc:id="PP_1913" fbc:label="PP_1913"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1913"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1913"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744067.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LL7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1331" sboTerm="SBO:0000243" fbc:id="PP_1331" fbc:label="PP_1331"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1331"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1331"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743490.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N82"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4683" sboTerm="SBO:0000243" fbc:id="PP_4683" fbc:label="PP_4683"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4683"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4683"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746792.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DY5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4807" sboTerm="SBO:0000243" fbc:id="PP_4807" fbc:label="PP_4807"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4807"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4807"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746912.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DL8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5084" sboTerm="SBO:0000243" fbc:id="PP_5084" fbc:label="PP_5084"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5084"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5084"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747185.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CU6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3741" sboTerm="SBO:0000243" fbc:id="PP_3741" fbc:label="PP_3741"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3741"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3741"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745872.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2098" sboTerm="SBO:0000243" fbc:id="PP_2098" fbc:label="PP_2098"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2098"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2098"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744248.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L37"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4803" sboTerm="SBO:0000243" fbc:id="PP_4803" fbc:label="PP_4803"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4803"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4803"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746908.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DM2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3794" sboTerm="SBO:0000243" fbc:id="PP_3794" fbc:label="PP_3794"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3794"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3794"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745924.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GD0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0654" sboTerm="SBO:0000243" fbc:id="PP_0654" fbc:label="PP_0654"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0654"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0654"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742815.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q44"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0751" sboTerm="SBO:0000243" fbc:id="PP_0751" fbc:label="PP_0751"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0751"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0751"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742912.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PU7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2925" sboTerm="SBO:0000243" fbc:id="PP_2925" fbc:label="PP_2925"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2925"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2925"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745069.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IS4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1251" sboTerm="SBO:0000243" fbc:id="PP_1251" fbc:label="PP_1251"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1251"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1251"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743411.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NF9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5085" sboTerm="SBO:0000243" fbc:id="PP_5085" fbc:label="PP_5085"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5085"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5085"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747186.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CU5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0853" sboTerm="SBO:0000243" fbc:id="PP_0853" fbc:label="PP_0853"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0853"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0853"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743014.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PJ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1618" sboTerm="SBO:0000243" fbc:id="PP_1618" fbc:label="PP_1618"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1618"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1618"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743775.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MF3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1614" sboTerm="SBO:0000243" fbc:id="PP_1614" fbc:label="PP_1614"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1614"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1614"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743771.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MF7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4967" sboTerm="SBO:0000243" fbc:id="PP_4967" fbc:label="PP_4967"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4967"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4967"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747070.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D60"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0219" sboTerm="SBO:0000243" fbc:id="PP_0219" fbc:label="PP_0219"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0219"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0219"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742387.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RB4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0220" sboTerm="SBO:0000243" fbc:id="PP_0220" fbc:label="PP_0220"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0220"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0220"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742388.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RB3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0114" sboTerm="SBO:0000243" fbc:id="PP_0114" fbc:label="PP_0114"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0114"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0114"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742284.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RL5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0221" sboTerm="SBO:0000243" fbc:id="PP_0221" fbc:label="PP_0221"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0221"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0221"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742389.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RB2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0113" sboTerm="SBO:0000243" fbc:id="PP_0113" fbc:label="PP_0113"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0113"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0113"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742283.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RL6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0112" sboTerm="SBO:0000243" fbc:id="PP_0112" fbc:label="PP_0112"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0112"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0112"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742282.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RL7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1308" sboTerm="SBO:0000243" fbc:id="PP_1308" fbc:label="PP_1308"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1308"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1308"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743468.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NA4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2375" sboTerm="SBO:0000243" fbc:id="PP_2375" fbc:label="PP_2375"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2375"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2375"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744524.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KB5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2698" sboTerm="SBO:0000243" fbc:id="PP_2698" fbc:label="PP_2698"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2698"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2698"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744842.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JF1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0336" sboTerm="SBO:0000243" fbc:id="PP_0336" fbc:label="PP_0336"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0336"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0336"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742503.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QZ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1097" sboTerm="SBO:0000243" fbc:id="PP_1097" fbc:label="PP_1097"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1097"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1097"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743258.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NV7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4471" sboTerm="SBO:0000243" fbc:id="PP_4471" fbc:label="PP_4471"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4471"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4471"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746582.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EJ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2645" sboTerm="SBO:0000243" fbc:id="PP_2645" fbc:label="PP_2645"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2645"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2645"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744789.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JK4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4066" sboTerm="SBO:0000243" fbc:id="PP_4066" fbc:label="PP_4066"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4066"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4066"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746192.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FM3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2336" sboTerm="SBO:0000243" fbc:id="PP_2336" fbc:label="PP_2336"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2336"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2336"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744485.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KF4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4805" sboTerm="SBO:0000243" fbc:id="PP_4805" fbc:label="PP_4805"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4805"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4805"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746910.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DM0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4971" sboTerm="SBO:0000243" fbc:id="PP_4971" fbc:label="PP_4971"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4971"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4971"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747074.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D56"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2130" sboTerm="SBO:0000243" fbc:id="PP_2130" fbc:label="PP_2130"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2130"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2130"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744279.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L07"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0660" sboTerm="SBO:0000243" fbc:id="PP_0660" fbc:label="PP_0660"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0660"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0660"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742821.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q38"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0597" sboTerm="SBO:0000243" fbc:id="PP_0597" fbc:label="PP_0597"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0597"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0597"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742760.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q97"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4667" sboTerm="SBO:0000243" fbc:id="PP_4667" fbc:label="PP_4667"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4667"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4667"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746776.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E01"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3802" sboTerm="SBO:0000243" fbc:id="PP_3802" fbc:label="PP_3802"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3802"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3802"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745932.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GC2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3801" sboTerm="SBO:0000243" fbc:id="PP_3801" fbc:label="PP_3801"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3801"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3801"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745931.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GC3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3803" sboTerm="SBO:0000243" fbc:id="PP_3803" fbc:label="PP_3803"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3803"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3803"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745933.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GC1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1293" sboTerm="SBO:0000243" fbc:id="PP_1293" fbc:label="PP_1293"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1293"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1293"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743453.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NB9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4928" sboTerm="SBO:0000243" fbc:id="PP_4928" fbc:label="PP_4928"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4928"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4928"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747031.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D99"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3830" sboTerm="SBO:0000243" fbc:id="PP_3830" fbc:label="PP_3830"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3830"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3830"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745960.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88G95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3828" sboTerm="SBO:0000243" fbc:id="PP_3828" fbc:label="PP_3828"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3828"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3828"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745958.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88G97"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3829" sboTerm="SBO:0000243" fbc:id="PP_3829" fbc:label="PP_3829"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3829"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3829"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745959.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88G96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4699" sboTerm="SBO:0000243" fbc:id="PP_4699" fbc:label="PP_4699"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4699"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4699"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746808.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4051" sboTerm="SBO:0000243" fbc:id="PP_4051" fbc:label="PP_4051"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4051"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4051"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746177.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FN8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4053" sboTerm="SBO:0000243" fbc:id="PP_4053" fbc:label="PP_4053"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4053"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4053"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746179.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FN6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4600" sboTerm="SBO:0000243" fbc:id="PP_4600" fbc:label="PP_4600"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4600"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4600"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746709.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E67"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2122" sboTerm="SBO:0000243" fbc:id="PP_2122" fbc:label="PP_2122"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2122"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2122"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744271.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L15"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0572" sboTerm="SBO:0000243" fbc:id="PP_0572" fbc:label="PP_0572"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0572"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0572"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742735.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QC2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1294" sboTerm="SBO:0000243" fbc:id="PP_1294" fbc:label="PP_1294"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1294"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1294"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743454.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NB8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0735" sboTerm="SBO:0000243" fbc:id="PP_0735" fbc:label="PP_0735"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0735"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0735"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742896.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PW3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1945" sboTerm="SBO:0000243" fbc:id="PP_1945" fbc:label="PP_1945"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1945"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1945"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744097.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LI7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2265" sboTerm="SBO:0000243" fbc:id="PP_2265" fbc:label="PP_2265"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2265"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2265"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744414.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4977" sboTerm="SBO:0000243" fbc:id="PP_4977" fbc:label="PP_4977"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4977"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4977"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747079.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D51"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2918" sboTerm="SBO:0000243" fbc:id="PP_2918" fbc:label="PP_2918"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2918"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2918"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745062.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IT1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1766" sboTerm="SBO:0000243" fbc:id="PP_1766" fbc:label="PP_1766"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1766"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1766"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743922.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M09"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3715" sboTerm="SBO:0000243" fbc:id="PP_3715" fbc:label="PP_3715"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3715"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3715"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745848.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GK6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1379" sboTerm="SBO:0000243" fbc:id="PP_1379" fbc:label="PP_1379"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1379"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1379"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743538.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N37"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3714" sboTerm="SBO:0000243" fbc:id="PP_3714" fbc:label="PP_3714"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3714"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3714"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745847.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GK7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_130" sboTerm="SBO:0000243" fbc:id="pWW0_130" fbc:label="pWW0_130"/> <fbc:geneProduct metaid="pWW0_129" sboTerm="SBO:0000243" fbc:id="pWW0_129" fbc:label="pWW0_129"/> <fbc:geneProduct metaid="PP_3948" sboTerm="SBO:0000243" fbc:id="PP_3948" fbc:label="PP_3948"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3948"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3948"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746078.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FX8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3947" sboTerm="SBO:0000243" fbc:id="PP_3947" fbc:label="PP_3947"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3947"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3947"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746077.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FX9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4029" sboTerm="SBO:0000243" fbc:id="PP_4029" fbc:label="PP_4029"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4029"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4029"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746157.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FQ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4130" sboTerm="SBO:0000243" fbc:id="PP_4130" fbc:label="PP_4130"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4130"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4130"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746249.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FG6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4125" sboTerm="SBO:0000243" fbc:id="PP_4125" fbc:label="PP_4125"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4125"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4125"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746244.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4127" sboTerm="SBO:0000243" fbc:id="PP_4127" fbc:label="PP_4127"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4127"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4127"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746246.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FG9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4128" sboTerm="SBO:0000243" fbc:id="PP_4128" fbc:label="PP_4128"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4128"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4128"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746247.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FG8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4129" sboTerm="SBO:0000243" fbc:id="PP_4129" fbc:label="PP_4129"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4129"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4129"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746248.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FG7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4119" sboTerm="SBO:0000243" fbc:id="PP_4119" fbc:label="PP_4119"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4119"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4119"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746238.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4122" sboTerm="SBO:0000243" fbc:id="PP_4122" fbc:label="PP_4122"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4122"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4122"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746241.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4126" sboTerm="SBO:0000243" fbc:id="PP_4126" fbc:label="PP_4126"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4126"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4126"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746245.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4121" sboTerm="SBO:0000243" fbc:id="PP_4121" fbc:label="PP_4121"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4121"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4121"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746240.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4123" sboTerm="SBO:0000243" fbc:id="PP_4123" fbc:label="PP_4123"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4123"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4123"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746242.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4131" sboTerm="SBO:0000243" fbc:id="PP_4131" fbc:label="PP_4131"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4131"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4131"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746250.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FG5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4120" sboTerm="SBO:0000243" fbc:id="PP_4120" fbc:label="PP_4120"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4120"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746239.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4124" sboTerm="SBO:0000243" fbc:id="PP_4124" fbc:label="PP_4124"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4124"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4124"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746243.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0626" sboTerm="SBO:0000243" fbc:id="PP_0626" fbc:label="PP_0626"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0626"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0626"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742787.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q70"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2439" sboTerm="SBO:0000243" fbc:id="PP_2439" fbc:label="PP_2439"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2439"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2439"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744587.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K52"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2440" sboTerm="SBO:0000243" fbc:id="PP_2440" fbc:label="PP_2440"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2440"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2440"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744588.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A155"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2012" sboTerm="SBO:0000243" fbc:id="PP_2012" fbc:label="PP_2012"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2012"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2012"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744162.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LC3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0072" sboTerm="SBO:0000243" fbc:id="PP_0072" fbc:label="PP_0072"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0072"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0072"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742242.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RQ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3606" sboTerm="SBO:0000243" fbc:id="PP_3606" fbc:label="PP_3606"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3606"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3606"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745742.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GW1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4869" sboTerm="SBO:0000243" fbc:id="PP_4869" fbc:label="PP_4869"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4869"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4869"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746974.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DF6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2151" sboTerm="SBO:0000243" fbc:id="PP_2151" fbc:label="PP_2151"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2151"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2151"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744300.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KY8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0155" sboTerm="SBO:0000243" fbc:id="PP_0155" fbc:label="PP_0155"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0155"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0155"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742325.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RH4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0156" sboTerm="SBO:0000243" fbc:id="PP_0156" fbc:label="PP_0156"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0156"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0156"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_020191551.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FVX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4868" sboTerm="SBO:0000243" fbc:id="PP_4868" fbc:label="PP_4868"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4868"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4868"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746973.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DF7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4031" sboTerm="SBO:0000243" fbc:id="PP_4031" fbc:label="PP_4031"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4031"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4031"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746159.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FQ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1587" sboTerm="SBO:0000243" fbc:id="PP_1587" fbc:label="PP_1587"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1587"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1587"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743744.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MI4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4974" sboTerm="SBO:0000243" fbc:id="PP_4974" fbc:label="PP_4974"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4974"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4974"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747077.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D53"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1132" sboTerm="SBO:0000243" fbc:id="PP_1132" fbc:label="PP_1132"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1132"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1132"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743293.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3958" sboTerm="SBO:0000243" fbc:id="PP_3958" fbc:label="PP_3958"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3958"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3958"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746088.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FW9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0203" sboTerm="SBO:0000243" fbc:id="PP_0203" fbc:label="PP_0203"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0203"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0203"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742372.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RC9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0849" sboTerm="SBO:0000243" fbc:id="PP_0849" fbc:label="PP_0849"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0849"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0849"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743010.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3943" sboTerm="SBO:0000243" fbc:id="PP_3943" fbc:label="PP_3943"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3943"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3943"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746073.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FY3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5029" sboTerm="SBO:0000243" fbc:id="PP_5029" fbc:label="PP_5029"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5029"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5029"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747130.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D00"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5233" sboTerm="SBO:0000243" fbc:id="PP_5233" fbc:label="PP_5233"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5233"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5233"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747334.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CE8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2106" sboTerm="SBO:0000243" fbc:id="PP_2106" fbc:label="PP_2106"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2106"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2106"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744256.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L29"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3342" sboTerm="SBO:0000243" fbc:id="PP_3342" fbc:label="PP_3342"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3342"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3342"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745482.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HL4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3346" sboTerm="SBO:0000243" fbc:id="PP_3346" fbc:label="PP_3346"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3346"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3346"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745486.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HL0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3343" sboTerm="SBO:0000243" fbc:id="PP_3343" fbc:label="PP_3343"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3343"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3343"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745483.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HL3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3345" sboTerm="SBO:0000243" fbc:id="PP_3345" fbc:label="PP_3345"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3345"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3345"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745485.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HL1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3344" sboTerm="SBO:0000243" fbc:id="PP_3344" fbc:label="PP_3344"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3344"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3344"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745484.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HL2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4810" sboTerm="SBO:0000243" fbc:id="PP_4810" fbc:label="PP_4810"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4810"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4810"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746915.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DL5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3515" sboTerm="SBO:0000243" fbc:id="PP_3515" fbc:label="PP_3515"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3515"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3515"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745652.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H50"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3514" sboTerm="SBO:0000243" fbc:id="PP_3514" fbc:label="PP_3514"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3514"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3514"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745651.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H51"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1679" sboTerm="SBO:0000243" fbc:id="PP_1679" fbc:label="PP_1679"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1679"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1679"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743836.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0787" sboTerm="SBO:0000243" fbc:id="PP_0787" fbc:label="PP_0787"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0787"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0787"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742948.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PR1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2092" sboTerm="SBO:0000243" fbc:id="PP_2092" fbc:label="PP_2092"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2092"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2092"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744242.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L43"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0209" sboTerm="SBO:0000243" fbc:id="PP_0209" fbc:label="PP_0209"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0209"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0209"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742378.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RC3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3637" sboTerm="SBO:0000243" fbc:id="PP_3637" fbc:label="PP_3637"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3637"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3637"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745773.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GT1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0208" sboTerm="SBO:0000243" fbc:id="PP_0208" fbc:label="PP_0208"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0208"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0208"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742377.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RC4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3636" sboTerm="SBO:0000243" fbc:id="PP_3636" fbc:label="PP_3636"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3636"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3636"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745772.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3635" sboTerm="SBO:0000243" fbc:id="PP_3635" fbc:label="PP_3635"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3635"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3635"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745771.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0207" sboTerm="SBO:0000243" fbc:id="PP_0207" fbc:label="PP_0207"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0207"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0207"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742376.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RC5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0808" sboTerm="SBO:0000243" fbc:id="PP_0808" fbc:label="PP_0808"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0808"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0808"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742969.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PP0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1620" sboTerm="SBO:0000243" fbc:id="PP_1620" fbc:label="PP_1620"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1620"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1620"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743777.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MF1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1414" sboTerm="SBO:0000243" fbc:id="PP_1414" fbc:label="PP_1414"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1414"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1414"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743572.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N04"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4903" sboTerm="SBO:0000243" fbc:id="PP_4903" fbc:label="PP_4903"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4903"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4903"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747006.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DC4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1657" sboTerm="SBO:0000243" fbc:id="PP_1657" fbc:label="PP_1657"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1657"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1657"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743814.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MB7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5100" sboTerm="SBO:0000243" fbc:id="PP_5100" fbc:label="PP_5100"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5100"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5100"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747201.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CT0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2102" sboTerm="SBO:0000243" fbc:id="PP_2102" fbc:label="PP_2102"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2102"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2102"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744252.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L33"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1703" sboTerm="SBO:0000243" fbc:id="PP_1703" fbc:label="PP_1703"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1703"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1703"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743860.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M71"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1705" sboTerm="SBO:0000243" fbc:id="PP_1705" fbc:label="PP_1705"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1705"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1705"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743862.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M69"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1706" sboTerm="SBO:0000243" fbc:id="PP_1706" fbc:label="PP_1706"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1706"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1706"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743863.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M68"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1394" sboTerm="SBO:0000243" fbc:id="PP_1394" fbc:label="PP_1394"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1394"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1394"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743553.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N22"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3723" sboTerm="SBO:0000243" fbc:id="PP_3723" fbc:label="PP_3723"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3723"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3723"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_049586549.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FWH9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2514" sboTerm="SBO:0000243" fbc:id="PP_2514" fbc:label="PP_2514"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2514"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2514"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744662.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JX9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1000" sboTerm="SBO:0000243" fbc:id="PP_1000" fbc:label="PP_1000"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1000"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1000"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743161.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P53"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1079" sboTerm="SBO:0000243" fbc:id="PP_1079" fbc:label="PP_1079"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1079"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1079"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743240.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3122" sboTerm="SBO:0000243" fbc:id="PP_3122" fbc:label="PP_3122"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3122"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3122"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745266.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I79"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3123" sboTerm="SBO:0000243" fbc:id="PP_3123" fbc:label="PP_3123"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3123"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3123"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745267.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I78"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0687" sboTerm="SBO:0000243" fbc:id="PP_0687" fbc:label="PP_0687"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0687"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0687"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742848.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q11"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4287" sboTerm="SBO:0000243" fbc:id="PP_4287" fbc:label="PP_4287"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4287"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4287"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746403.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1768" sboTerm="SBO:0000243" fbc:id="PP_1768" fbc:label="PP_1768"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1768"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1768"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743924.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M07"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4401" sboTerm="SBO:0000243" fbc:id="PP_4401" fbc:label="PP_4401"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4401"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4401"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746515.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EQ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4402" sboTerm="SBO:0000243" fbc:id="PP_4402" fbc:label="PP_4402"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4402"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4402"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746516.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EQ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4403" sboTerm="SBO:0000243" fbc:id="PP_4403" fbc:label="PP_4403"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4403"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4403"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746517.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EQ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4404" sboTerm="SBO:0000243" fbc:id="PP_4404" fbc:label="PP_4404"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4404"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4404"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746518.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EP9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2515" sboTerm="SBO:0000243" fbc:id="PP_2515" fbc:label="PP_2515"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2515"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2515"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744663.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JX8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2513" sboTerm="SBO:0000243" fbc:id="PP_2513" fbc:label="PP_2513"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2513"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2513"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744661.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JY0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5011" sboTerm="SBO:0000243" fbc:id="PP_5011" fbc:label="PP_5011"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5011"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5011"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747113.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D17"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0427" sboTerm="SBO:0000243" fbc:id="PP_0427" fbc:label="PP_0427"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0427"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0427"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742593.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QR1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5197" sboTerm="SBO:0000243" fbc:id="PP_5197" fbc:label="PP_5197"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5197"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5197"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747298.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CI4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1815" sboTerm="SBO:0000243" fbc:id="PP_1815" fbc:label="PP_1815"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1815"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1815"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743970.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LW2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5199" sboTerm="SBO:0000243" fbc:id="PP_5199" fbc:label="PP_5199"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5199"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5199"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747300.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_094" sboTerm="SBO:0000243" fbc:id="pWW0_094" fbc:label="pWW0_094"/> <fbc:geneProduct metaid="PP_5213" sboTerm="SBO:0000243" fbc:id="PP_5213" fbc:label="PP_5213"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5213"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5213"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747314.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CG8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0548" sboTerm="SBO:0000243" fbc:id="PP_0548" fbc:label="PP_0548"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0548"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0548"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742711.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QE6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5013" sboTerm="SBO:0000243" fbc:id="PP_5013" fbc:label="PP_5013"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5013"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5013"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_049587492.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FWS4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3796" sboTerm="SBO:0000243" fbc:id="PP_3796" fbc:label="PP_3796"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3796"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3796"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745926.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GC8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3190" sboTerm="SBO:0000243" fbc:id="PP_3190" fbc:label="PP_3190"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3190"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3190"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745334.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3533" sboTerm="SBO:0000243" fbc:id="PP_3533" fbc:label="PP_3533"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3533"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3533"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745670.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H32"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4431" sboTerm="SBO:0000243" fbc:id="PP_4431" fbc:label="PP_4431"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4431"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4431"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746544.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0864" sboTerm="SBO:0000243" fbc:id="PP_0864" fbc:label="PP_0864"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0864"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0864"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743025.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PI6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5291" sboTerm="SBO:0000243" fbc:id="PP_5291" fbc:label="PP_5291"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5291"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5291"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747392.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C92"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1779" sboTerm="SBO:0000243" fbc:id="PP_1779" fbc:label="PP_1779"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1779"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1779"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743935.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LZ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1778" sboTerm="SBO:0000243" fbc:id="PP_1778" fbc:label="PP_1778"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1778"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1778"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743934.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LZ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3270" sboTerm="SBO:0000243" fbc:id="PP_3270" fbc:label="PP_3270"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3270"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3270"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745413.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3283" sboTerm="SBO:0000243" fbc:id="PP_3283" fbc:label="PP_3283"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3283"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3283"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745426.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1380" sboTerm="SBO:0000243" fbc:id="PP_1380" fbc:label="PP_1380"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1380"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1380"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743539.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N36"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0213" sboTerm="SBO:0000243" fbc:id="PP_0213" fbc:label="PP_0213"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0213"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0213"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742381.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RC0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4947" sboTerm="SBO:0000243" fbc:id="PP_4947" fbc:label="PP_4947"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4947"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4947"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747050.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D80"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5095" sboTerm="SBO:0000243" fbc:id="PP_5095" fbc:label="PP_5095"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5095"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5095"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747196.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CT5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3778" sboTerm="SBO:0000243" fbc:id="PP_3778" fbc:label="PP_3778"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3778"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3778"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745908.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GE6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3466" sboTerm="SBO:0000243" fbc:id="PP_3466" fbc:label="PP_3466"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3466"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3466"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745604.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H94"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3277" sboTerm="SBO:0000243" fbc:id="PP_3277" fbc:label="PP_3277"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3277"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3277"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745420.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3274" sboTerm="SBO:0000243" fbc:id="PP_3274" fbc:label="PP_3274"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3274"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3274"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745417.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3275" sboTerm="SBO:0000243" fbc:id="PP_3275" fbc:label="PP_3275"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3275"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3275"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745418.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3276" sboTerm="SBO:0000243" fbc:id="PP_3276" fbc:label="PP_3276"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3276"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3276"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745419.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3278" sboTerm="SBO:0000243" fbc:id="PP_3278" fbc:label="PP_3278"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3278"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3278"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745421.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HS5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3272" sboTerm="SBO:0000243" fbc:id="PP_3272" fbc:label="PP_3272"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3272"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3272"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745415.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HT1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3271" sboTerm="SBO:0000243" fbc:id="PP_3271" fbc:label="PP_3271"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3271"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3271"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745414.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2208" sboTerm="SBO:0000243" fbc:id="PP_2208" fbc:label="PP_2208"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2208"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2208"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744357.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KT1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1285" sboTerm="SBO:0000243" fbc:id="PP_1285" fbc:label="PP_1285"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1285"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1285"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743445.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NC7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1287" sboTerm="SBO:0000243" fbc:id="PP_1287" fbc:label="PP_1287"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1287"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1287"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743447.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NC5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1282" sboTerm="SBO:0000243" fbc:id="PP_1282" fbc:label="PP_1282"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1282"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1282"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743442.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88ND0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1286" sboTerm="SBO:0000243" fbc:id="PP_1286" fbc:label="PP_1286"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1286"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1286"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743446.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NC6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4700" sboTerm="SBO:0000243" fbc:id="PP_4700" fbc:label="PP_4700"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4700"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4700"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746809.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DW8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1334" sboTerm="SBO:0000243" fbc:id="PP_1334" fbc:label="PP_1334"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1334"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1334"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743493.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N79"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5346" sboTerm="SBO:0000243" fbc:id="PP_5346" fbc:label="PP_5346"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5346"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5346"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747447.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C37"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5347" sboTerm="SBO:0000243" fbc:id="PP_5347" fbc:label="PP_5347"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5347"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5347"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747448.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C36"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3410" sboTerm="SBO:0000243" fbc:id="PP_3410" fbc:label="PP_3410"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3410"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3410"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745548.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HF0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4826" sboTerm="SBO:0000243" fbc:id="PP_4826" fbc:label="PP_4826"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4826"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4826"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746931.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DJ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4827" sboTerm="SBO:0000243" fbc:id="PP_4827" fbc:label="PP_4827"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4827"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4827"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746932.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DJ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4832" sboTerm="SBO:0000243" fbc:id="PP_4832" fbc:label="PP_4832"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4832"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4832"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746937.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DJ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4830" sboTerm="SBO:0000243" fbc:id="PP_4830" fbc:label="PP_4830"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4830"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4830"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746935.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DJ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4828" sboTerm="SBO:0000243" fbc:id="PP_4828" fbc:label="PP_4828"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4828"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4828"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746933.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DJ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4655" sboTerm="SBO:0000243" fbc:id="PP_4655" fbc:label="PP_4655"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4655"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4655"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746764.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E13"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4656" sboTerm="SBO:0000243" fbc:id="PP_4656" fbc:label="PP_4656"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4656"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4656"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746765.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0914" sboTerm="SBO:0000243" fbc:id="PP_0914" fbc:label="PP_0914"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0914"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0914"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743075.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PD6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3435" sboTerm="SBO:0000243" fbc:id="PP_3435" fbc:label="PP_3435"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3435"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3435"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745573.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HC5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1144" sboTerm="SBO:0000243" fbc:id="PP_1144" fbc:label="PP_1144"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1144"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1144"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743305.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NR1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1761" sboTerm="SBO:0000243" fbc:id="PP_1761" fbc:label="PP_1761"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1761"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1761"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743917.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M14"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5366" sboTerm="SBO:0000243" fbc:id="PP_5366" fbc:label="PP_5366"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5366"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5366"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747467.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C17"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0339" sboTerm="SBO:0000243" fbc:id="PP_0339" fbc:label="PP_0339"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0339"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0339"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742506.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QZ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0338" sboTerm="SBO:0000243" fbc:id="PP_0338" fbc:label="PP_0338"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0338"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0338"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742505.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QZ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1129" sboTerm="SBO:0000243" fbc:id="PP_1129" fbc:label="PP_1129"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1129"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1129"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743290.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NS5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0402" sboTerm="SBO:0000243" fbc:id="PP_0402" fbc:label="PP_0402"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0402"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0402"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742569.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QT5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1436" sboTerm="SBO:0000243" fbc:id="PP_1436" fbc:label="PP_1436"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1436"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1436"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743594.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MY2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3459" sboTerm="SBO:0000243" fbc:id="PP_3459" fbc:label="PP_3459"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3459"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3459"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745597.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HA1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3460" sboTerm="SBO:0000243" fbc:id="PP_3460" fbc:label="PP_3460"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3460"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3460"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745598.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A181"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3461" sboTerm="SBO:0000243" fbc:id="PP_3461" fbc:label="PP_3461"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3461"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3461"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745599.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H99"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3462" sboTerm="SBO:0000243" fbc:id="PP_3462" fbc:label="PP_3462"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3462"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3462"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2117" sboTerm="SBO:0000243" fbc:id="PP_2117" fbc:label="PP_2117"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2117"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2117"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744266.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L20"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4716" sboTerm="SBO:0000243" fbc:id="PP_4716" fbc:label="PP_4716"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4716"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4716"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746824.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DV3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5155" sboTerm="SBO:0000243" fbc:id="PP_5155" fbc:label="PP_5155"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5155"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5155"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747256.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4963" sboTerm="SBO:0000243" fbc:id="PP_4963" fbc:label="PP_4963"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4963"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4963"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747066.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D64"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1023" sboTerm="SBO:0000243" fbc:id="PP_1023" fbc:label="PP_1023"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1023"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1023"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743184.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P30"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3376" sboTerm="SBO:0000243" fbc:id="PP_3376" fbc:label="PP_3376"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3376"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3376"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745516.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HI1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1764" sboTerm="SBO:0000243" fbc:id="PP_1764" fbc:label="PP_1764"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1764"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1764"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743920.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M11"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0416" sboTerm="SBO:0000243" fbc:id="PP_0416" fbc:label="PP_0416"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0416"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0416"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742582.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5056" sboTerm="SBO:0000243" fbc:id="PP_5056" fbc:label="PP_5056"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5056"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5056"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747157.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1777" sboTerm="SBO:0000243" fbc:id="PP_1777" fbc:label="PP_1777"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1777"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1777"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743933.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LZ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3578" sboTerm="SBO:0000243" fbc:id="PP_3578" fbc:label="PP_3578"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3578"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3578"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745715.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GY7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5288" sboTerm="SBO:0000243" fbc:id="PP_5288" fbc:label="PP_5288"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5288"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5288"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747389.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C93"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0520" sboTerm="SBO:0000243" fbc:id="PP_0520" fbc:label="PP_0520"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0520"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0520"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742683.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QH3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4097" sboTerm="SBO:0000243" fbc:id="PP_4097" fbc:label="PP_4097"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4097"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4097"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746217.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FJ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5004" sboTerm="SBO:0000243" fbc:id="PP_5004" fbc:label="PP_5004"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5004"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5004"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747106.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D24"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5003" sboTerm="SBO:0000243" fbc:id="PP_5003" fbc:label="PP_5003"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5003"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5003"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747105.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D25"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5005" sboTerm="SBO:0000243" fbc:id="PP_5005" fbc:label="PP_5005"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5005"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5005"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747107.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D23"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4689" sboTerm="SBO:0000243" fbc:id="PP_4689" fbc:label="PP_4689"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4689"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4689"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746798.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DX9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4686" sboTerm="SBO:0000243" fbc:id="PP_4686" fbc:label="PP_4686"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4686"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4686"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746795.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DY2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4327" sboTerm="SBO:0000243" fbc:id="PP_4327" fbc:label="PP_4327"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4327"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4327"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746442.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EX5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4326" sboTerm="SBO:0000243" fbc:id="PP_4326" fbc:label="PP_4326"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4326"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4326"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746441.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EX6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4325" sboTerm="SBO:0000243" fbc:id="PP_4325" fbc:label="PP_4325"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4325"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4325"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746440.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EX7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1006" sboTerm="SBO:0000243" fbc:id="PP_1006" fbc:label="PP_1006"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1006"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1006"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743167.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P47"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4490" sboTerm="SBO:0000243" fbc:id="PP_4490" fbc:label="PP_4490"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4490"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4490"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746601.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EH3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4491" sboTerm="SBO:0000243" fbc:id="PP_4491" fbc:label="PP_4491"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4491"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4491"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746602.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EH2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2470" sboTerm="SBO:0000243" fbc:id="PP_2470" fbc:label="PP_2470"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2470"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2470"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744618.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K22"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2469" sboTerm="SBO:0000243" fbc:id="PP_2469" fbc:label="PP_2469"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2469"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2469"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744617.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K23"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4495" sboTerm="SBO:0000243" fbc:id="PP_4495" fbc:label="PP_4495"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4495"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4495"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746606.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EG8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0686" sboTerm="SBO:0000243" fbc:id="PP_0686" fbc:label="PP_0686"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0686"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0686"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742847.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88Q12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0037" sboTerm="SBO:0000243" fbc:id="PP_0037" fbc:label="PP_0037"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0037"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0037"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742207.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RU2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5327" sboTerm="SBO:0000243" fbc:id="PP_5327" fbc:label="PP_5327"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5327"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5327"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747428.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C56"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2659" sboTerm="SBO:0000243" fbc:id="PP_2659" fbc:label="PP_2659"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2659"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2659"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744803.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JJ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5328" sboTerm="SBO:0000243" fbc:id="PP_5328" fbc:label="PP_5328"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5328"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5328"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747429.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C55"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2656" sboTerm="SBO:0000243" fbc:id="PP_2656" fbc:label="PP_2656"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2656"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2656"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744800.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JJ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5329" sboTerm="SBO:0000243" fbc:id="PP_5329" fbc:label="PP_5329"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5329"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5329"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747430.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C54"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5326" sboTerm="SBO:0000243" fbc:id="PP_5326" fbc:label="PP_5326"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5326"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5326"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747427.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C57"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2658" sboTerm="SBO:0000243" fbc:id="PP_2658" fbc:label="PP_2658"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2658"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2658"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744802.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JJ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2657" sboTerm="SBO:0000243" fbc:id="PP_2657" fbc:label="PP_2657"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2657"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2657"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744801.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JJ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2376" sboTerm="SBO:0000243" fbc:id="PP_2376" fbc:label="PP_2376"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2376"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2376"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744525.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KB4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4936" sboTerm="SBO:0000243" fbc:id="PP_4936" fbc:label="PP_4936"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4936"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4936"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747039.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D91"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0983" sboTerm="SBO:0000243" fbc:id="PP_0983" fbc:label="PP_0983"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0983"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0983"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743144.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P70"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0954" sboTerm="SBO:0000243" fbc:id="PP_0954" fbc:label="PP_0954"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0954"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0954"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743115.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P98"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0982" sboTerm="SBO:0000243" fbc:id="PP_0982" fbc:label="PP_0982"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0982"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0982"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743143.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P71"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0953" sboTerm="SBO:0000243" fbc:id="PP_0953" fbc:label="PP_0953"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0953"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0953"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743114.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P99"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0955" sboTerm="SBO:0000243" fbc:id="PP_0955" fbc:label="PP_0955"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0955"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0955"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743116.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P97"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0364" sboTerm="SBO:0000243" fbc:id="PP_0364" fbc:label="PP_0364"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0364"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0364"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742531.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QX0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0438" sboTerm="SBO:0000243" fbc:id="PP_0438" fbc:label="PP_0438"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0438"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0438"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742604.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QQ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4524" sboTerm="SBO:0000243" fbc:id="PP_4524" fbc:label="PP_4524"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4524"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4524"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746634.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EE1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0538" sboTerm="SBO:0000243" fbc:id="PP_0538" fbc:label="PP_0538"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0538"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0538"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742701.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QF6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3322" sboTerm="SBO:0000243" fbc:id="PP_3322" fbc:label="PP_3322"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3322"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3322"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745465.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HN1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2913" sboTerm="SBO:0000243" fbc:id="PP_2913" fbc:label="PP_2913"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2913"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2913"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745057.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IT6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1505" sboTerm="SBO:0000243" fbc:id="PP_1505" fbc:label="PP_1505"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1505"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1505"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743662.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MR4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5285" sboTerm="SBO:0000243" fbc:id="PP_5285" fbc:label="PP_5285"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5285"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5285"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747386.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0253" sboTerm="SBO:0000243" fbc:id="PP_0253" fbc:label="PP_0253"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0253"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0253"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0154" sboTerm="SBO:0000243" fbc:id="PP_0154" fbc:label="PP_0154"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0154"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0154"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742324.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RH5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5217" sboTerm="SBO:0000243" fbc:id="PP_5217" fbc:label="PP_5217"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5217"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5217"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747318.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CG4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1770" sboTerm="SBO:0000243" fbc:id="PP_1770" fbc:label="PP_1770"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1770"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1770"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743926.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M05"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0189" sboTerm="SBO:0000243" fbc:id="PP_0189" fbc:label="PP_0189"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0189"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0189"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742358.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RE2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2082" sboTerm="SBO:0000243" fbc:id="PP_2082" fbc:label="PP_2082"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2082"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2082"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744232.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L53"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0380" sboTerm="SBO:0000243" fbc:id="PP_0380" fbc:label="PP_0380"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0380"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0380"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742547.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0376" sboTerm="SBO:0000243" fbc:id="PP_0376" fbc:label="PP_0376"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0376"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0376"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742543.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QV8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0381" sboTerm="SBO:0000243" fbc:id="PP_0381" fbc:label="PP_0381"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0381"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0381"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742548.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QV3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0378" sboTerm="SBO:0000243" fbc:id="PP_0378" fbc:label="PP_0378"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0378"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0378"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742545.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QV6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4823" sboTerm="SBO:0000243" fbc:id="PP_4823" fbc:label="PP_4823"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4823"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4823"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746928.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1665" sboTerm="SBO:0000243" fbc:id="PP_1665" fbc:label="PP_1665"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1665"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1665"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743822.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MA9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1995" sboTerm="SBO:0000243" fbc:id="PP_1995" fbc:label="PP_1995"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1995"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1995"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744145.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LE0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5014" sboTerm="SBO:0000243" fbc:id="PP_5014" fbc:label="PP_5014"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5014"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5014"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747115.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D15"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1240" sboTerm="SBO:0000243" fbc:id="PP_1240" fbc:label="PP_1240"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1240"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1240"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743400.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NG9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5015" sboTerm="SBO:0000243" fbc:id="PP_5015" fbc:label="PP_5015"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5015"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5015"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747116.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D14"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1037" sboTerm="SBO:0000243" fbc:id="PP_1037" fbc:label="PP_1037"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1037"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1037"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743198.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P16"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0292" sboTerm="SBO:0000243" fbc:id="PP_0292" fbc:label="PP_0292"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0292"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0292"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742459.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R42"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1205" sboTerm="SBO:0000243" fbc:id="PP_1205" fbc:label="PP_1205"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1205"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1205"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743365.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2775" sboTerm="SBO:0000243" fbc:id="PP_2775" fbc:label="PP_2775"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2775"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2775"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744919.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J74"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2774" sboTerm="SBO:0000243" fbc:id="PP_2774" fbc:label="PP_2774"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2774"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2774"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744918.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J75"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1059" sboTerm="SBO:0000243" fbc:id="PP_1059" fbc:label="PP_1059"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1059"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1059"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743220.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NZ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5031" sboTerm="SBO:0000243" fbc:id="PP_5031" fbc:label="PP_5031"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5031"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5031"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747132.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CZ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4946" sboTerm="SBO:0000243" fbc:id="PP_4946" fbc:label="PP_4946"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4946"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4946"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747049.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D81"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5250" sboTerm="SBO:0000243" fbc:id="PP_5250" fbc:label="PP_5250"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5250"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5250"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747351.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CD1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0722" sboTerm="SBO:0000243" fbc:id="PP_0722" fbc:label="PP_0722"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0722"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0722"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742883.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PX6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4908" sboTerm="SBO:0000243" fbc:id="PP_4908" fbc:label="PP_4908"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4908"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4908"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747011.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DB9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4909" sboTerm="SBO:0000243" fbc:id="PP_4909" fbc:label="PP_4909"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4909"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4909"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747012.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DB8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4677" sboTerm="SBO:0000243" fbc:id="PP_4677" fbc:label="PP_4677"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4677"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4677"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746786.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DZ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3664" sboTerm="SBO:0000243" fbc:id="PP_3664" fbc:label="PP_3664"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3664"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3664"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745800.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GQ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0774" sboTerm="SBO:0000243" fbc:id="PP_0774" fbc:label="PP_0774"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0774"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0774"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742935.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PS4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5123" sboTerm="SBO:0000243" fbc:id="PP_5123" fbc:label="PP_5123"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5123"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5123"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747224.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CQ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5182" sboTerm="SBO:0000243" fbc:id="PP_5182" fbc:label="PP_5182"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5182"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5182"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747283.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CJ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2180" sboTerm="SBO:0000243" fbc:id="PP_2180" fbc:label="PP_2180"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2180"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744329.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KV9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0414" sboTerm="SBO:0000243" fbc:id="PP_0414" fbc:label="PP_0414"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0414"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0414"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742580.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0412" sboTerm="SBO:0000243" fbc:id="PP_0412" fbc:label="PP_0412"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0412"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0412"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742578.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5341" sboTerm="SBO:0000243" fbc:id="PP_5341" fbc:label="PP_5341"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5341"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5341"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747442.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C42"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5179" sboTerm="SBO:0000243" fbc:id="PP_5179" fbc:label="PP_5179"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5179"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5179"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747280.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CK1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5180" sboTerm="SBO:0000243" fbc:id="PP_5180" fbc:label="PP_5180"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5180"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747281.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CK0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5181" sboTerm="SBO:0000243" fbc:id="PP_5181" fbc:label="PP_5181"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5181"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747282.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CJ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3147" sboTerm="SBO:0000243" fbc:id="PP_3147" fbc:label="PP_3147"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3147"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3147"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745291.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I54"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0411" sboTerm="SBO:0000243" fbc:id="PP_0411" fbc:label="PP_0411"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0411"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0411"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742577.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0413" sboTerm="SBO:0000243" fbc:id="PP_0413" fbc:label="PP_0413"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0413"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0413"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742579.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5177" sboTerm="SBO:0000243" fbc:id="PP_5177" fbc:label="PP_5177"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5177"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5177"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747278.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CK3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0873" sboTerm="SBO:0000243" fbc:id="PP_0873" fbc:label="PP_0873"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0873"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0873"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743034.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PH7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5178" sboTerm="SBO:0000243" fbc:id="PP_5178" fbc:label="PP_5178"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5178"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5178"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747279.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CK2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2802" sboTerm="SBO:0000243" fbc:id="PP_2802" fbc:label="PP_2802"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2802"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2802"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744946.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J47"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2586" sboTerm="SBO:0000243" fbc:id="PP_2586" fbc:label="PP_2586"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2586"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2586"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744730.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JR3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1229" sboTerm="SBO:0000243" fbc:id="PP_1229" fbc:label="PP_1229"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1229"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1229"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743389.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5357" sboTerm="SBO:0000243" fbc:id="PP_5357" fbc:label="PP_5357"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5357"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5357"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747458.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C26"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1362" sboTerm="SBO:0000243" fbc:id="PP_1362" fbc:label="PP_1362"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1362"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1362"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743521.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N54"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4301" sboTerm="SBO:0000243" fbc:id="PP_4301" fbc:label="PP_4301"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4301"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4301"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746417.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EZ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4210" sboTerm="SBO:0000243" fbc:id="PP_4210" fbc:label="PP_4210"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4210"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4210"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746327.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F88"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4211" sboTerm="SBO:0000243" fbc:id="PP_4211" fbc:label="PP_4211"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4211"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4211"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746328.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F87"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4209" sboTerm="SBO:0000243" fbc:id="PP_4209" fbc:label="PP_4209"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4209"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4209"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746326.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F89"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4214" sboTerm="SBO:0000243" fbc:id="PP_4214" fbc:label="PP_4214"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4214"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4214"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746331.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F84"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4212" sboTerm="SBO:0000243" fbc:id="PP_4212" fbc:label="PP_4212"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4212"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4212"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746329.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F86"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4215" sboTerm="SBO:0000243" fbc:id="PP_4215" fbc:label="PP_4215"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4215"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4215"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746332.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F83"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4213" sboTerm="SBO:0000243" fbc:id="PP_4213" fbc:label="PP_4213"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4213"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4213"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746330.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F85"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3945" sboTerm="SBO:0000243" fbc:id="PP_3945" fbc:label="PP_3945"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3945"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3945"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746075.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FY1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4900" sboTerm="SBO:0000243" fbc:id="PP_4900" fbc:label="PP_4900"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4900"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4900"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747003.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DC7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0832" sboTerm="SBO:0000243" fbc:id="PP_0832" fbc:label="PP_0832"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0832"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0832"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742993.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PL8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3569" sboTerm="SBO:0000243" fbc:id="PP_3569" fbc:label="PP_3569"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3569"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3569"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745706.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GZ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2406" sboTerm="SBO:0000243" fbc:id="PP_2406" fbc:label="PP_2406"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2406"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2406"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744554.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K85"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2553" sboTerm="SBO:0000243" fbc:id="PP_2553" fbc:label="PP_2553"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2553"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2553"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744698.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88JU4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1231" sboTerm="SBO:0000243" fbc:id="PP_1231" fbc:label="PP_1231"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1231"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1231"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743391.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NH8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3763" sboTerm="SBO:0000243" fbc:id="PP_3763" fbc:label="PP_3763"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3763"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3763"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745893.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GG1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4469" sboTerm="SBO:0000243" fbc:id="PP_4469" fbc:label="PP_4469"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4469"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4469"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746580.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EJ3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0515" sboTerm="SBO:0000243" fbc:id="PP_0515" fbc:label="PP_0515"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0515"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0515"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742678.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QH8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2916" sboTerm="SBO:0000243" fbc:id="PP_2916" fbc:label="PP_2916"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2916"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2916"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745060.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0517" sboTerm="SBO:0000243" fbc:id="PP_0517" fbc:label="PP_0517"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0517"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0517"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742680.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QH6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2458" sboTerm="SBO:0000243" fbc:id="PP_2458" fbc:label="PP_2458"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2458"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2458"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744606.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K34"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5371" sboTerm="SBO:0000243" fbc:id="PP_5371" fbc:label="PP_5371"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5371"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5371"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747472.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5314" sboTerm="SBO:0000243" fbc:id="PP_5314" fbc:label="PP_5314"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5314"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5314"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747415.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C69"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5315" sboTerm="SBO:0000243" fbc:id="PP_5315" fbc:label="PP_5315"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5315"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5315"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747416.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88C68"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4552" sboTerm="SBO:0000243" fbc:id="PP_4552" fbc:label="PP_4552"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4552"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4552"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746661.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EB4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1802" sboTerm="SBO:0000243" fbc:id="PP_1802" fbc:label="PP_1802"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1802"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1802"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743957.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1801" sboTerm="SBO:0000243" fbc:id="PP_1801" fbc:label="PP_1801"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1801"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1801"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743956.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2454" sboTerm="SBO:0000243" fbc:id="PP_2454" fbc:label="PP_2454"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2454"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2454"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744602.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K38"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2455" sboTerm="SBO:0000243" fbc:id="PP_2455" fbc:label="PP_2455"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2455"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2455"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744603.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K37"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2459" sboTerm="SBO:0000243" fbc:id="PP_2459" fbc:label="PP_2459"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2459"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2459"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744607.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K33"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2456" sboTerm="SBO:0000243" fbc:id="PP_2456" fbc:label="PP_2456"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2456"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2456"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744604.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K36"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1800" sboTerm="SBO:0000243" fbc:id="PP_1800" fbc:label="PP_1800"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1800"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1800"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743955.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1177" sboTerm="SBO:0000243" fbc:id="PP_1177" fbc:label="PP_1177"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1177"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1177"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743337.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NN0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1179" sboTerm="SBO:0000243" fbc:id="PP_1179" fbc:label="PP_1179"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1179"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1179"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743339.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NM8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0415" sboTerm="SBO:0000243" fbc:id="PP_0415" fbc:label="PP_0415"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0415"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0415"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742581.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QS3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5150" sboTerm="SBO:0000243" fbc:id="PP_5150" fbc:label="PP_5150"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5150"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5150"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747251.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CN0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1680" sboTerm="SBO:0000243" fbc:id="PP_1680" fbc:label="PP_1680"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1680"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1680"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743837.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M94"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1323" sboTerm="SBO:0000243" fbc:id="PP_1323" fbc:label="PP_1323"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1323"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1323"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743483.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N89"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4477" sboTerm="SBO:0000243" fbc:id="PP_4477" fbc:label="PP_4477"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4477"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4477"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746588.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0324" sboTerm="SBO:0000243" fbc:id="PP_0324" fbc:label="PP_0324"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0324"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0324"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742491.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0326" sboTerm="SBO:0000243" fbc:id="PP_0326" fbc:label="PP_0326"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0326"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0326"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742493.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R08"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0325" sboTerm="SBO:0000243" fbc:id="PP_0325" fbc:label="PP_0325"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0325"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0325"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742492.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R09"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0323" sboTerm="SBO:0000243" fbc:id="PP_0323" fbc:label="PP_0323"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0323"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0323"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742490.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R11"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1528" sboTerm="SBO:0000243" fbc:id="PP_1528" fbc:label="PP_1528"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1528"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1528"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743685.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MP2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1525" sboTerm="SBO:0000243" fbc:id="PP_1525" fbc:label="PP_1525"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1525"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1525"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743682.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MP5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1588" sboTerm="SBO:0000243" fbc:id="PP_1588" fbc:label="PP_1588"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1588"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1588"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743745.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MI3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0493" sboTerm="SBO:0000243" fbc:id="PP_0493" fbc:label="PP_0493"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0493"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0493"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742658.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QJ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0823" sboTerm="SBO:0000243" fbc:id="PP_0823" fbc:label="PP_0823"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0823"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0823"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742984.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59392"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0840" sboTerm="SBO:0000243" fbc:id="PP_0840" fbc:label="PP_0840"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0840"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0840"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743001.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PL0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0228" sboTerm="SBO:0000243" fbc:id="PP_0228" fbc:label="PP_0228"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0228"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0228"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742396.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0987" sboTerm="SBO:0000243" fbc:id="PP_0987" fbc:label="PP_0987"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0987"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0987"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743148.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P66"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0297" sboTerm="SBO:0000243" fbc:id="PP_0297" fbc:label="PP_0297"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0297"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0297"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742464.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R37"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3144" sboTerm="SBO:0000243" fbc:id="PP_3144" fbc:label="PP_3144"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3144"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3144"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745288.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I57"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4000" sboTerm="SBO:0000243" fbc:id="PP_4000" fbc:label="PP_4000"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4000"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4000"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746130.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FT2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3589" sboTerm="SBO:0000243" fbc:id="PP_3589" fbc:label="PP_3589"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3589"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3589"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745725.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2443" sboTerm="SBO:0000243" fbc:id="PP_2443" fbc:label="PP_2443"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2443"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2443"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744591.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K49"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1617" sboTerm="SBO:0000243" fbc:id="PP_1617" fbc:label="PP_1617"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1617"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1617"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743774.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MF4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4475" sboTerm="SBO:0000243" fbc:id="PP_4475" fbc:label="PP_4475"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4475"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4475"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746586.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4478" sboTerm="SBO:0000243" fbc:id="PP_4478" fbc:label="PP_4478"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4478"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4478"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746589.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EI4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3999" sboTerm="SBO:0000243" fbc:id="PP_3999" fbc:label="PP_3999"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3999"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3999"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746129.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FT3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3768" sboTerm="SBO:0000243" fbc:id="PP_3768" fbc:label="PP_3768"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3768"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3768"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745898.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GF6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0074" sboTerm="SBO:0000243" fbc:id="PP_0074" fbc:label="PP_0074"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0074"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0074"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742244.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RQ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3002" sboTerm="SBO:0000243" fbc:id="PP_3002" fbc:label="PP_3002"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3002"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3002"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745146.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IJ7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5079" sboTerm="SBO:0000243" fbc:id="PP_5079" fbc:label="PP_5079"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5079"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5079"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747180.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CV1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0718" sboTerm="SBO:0000243" fbc:id="PP_0718" fbc:label="PP_0718"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0718"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0718"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742879.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PY0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1407" sboTerm="SBO:0000243" fbc:id="PP_1407" fbc:label="PP_1407"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1407"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1407"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743566.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N09"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3931" sboTerm="SBO:0000243" fbc:id="PP_3931" fbc:label="PP_3931"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3931"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3931"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746061.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FZ5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0915" sboTerm="SBO:0000243" fbc:id="PP_0915" fbc:label="PP_0915"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0915"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0915"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743076.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PD5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0946" sboTerm="SBO:0000243" fbc:id="PP_0946" fbc:label="PP_0946"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0946"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0946"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743107.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PA4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3151" sboTerm="SBO:0000243" fbc:id="PP_3151" fbc:label="PP_3151"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3151"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3151"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745295.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I50"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2488" sboTerm="SBO:0000243" fbc:id="PP_2488" fbc:label="PP_2488"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2488"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2488"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744636.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K05"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4202" sboTerm="SBO:0000243" fbc:id="PP_4202" fbc:label="PP_4202"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4202"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4202"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746319.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F96"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4201" sboTerm="SBO:0000243" fbc:id="PP_4201" fbc:label="PP_4201"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4201"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4201"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746318.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F97"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4203" sboTerm="SBO:0000243" fbc:id="PP_4203" fbc:label="PP_4203"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4203"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4203"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746320.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F95"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4193" sboTerm="SBO:0000243" fbc:id="PP_4193" fbc:label="PP_4193"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4193"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4193"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746310.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FA5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4191" sboTerm="SBO:0000243" fbc:id="PP_4191" fbc:label="PP_4191"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4191"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4191"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746308.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FA7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4190" sboTerm="SBO:0000243" fbc:id="PP_4190" fbc:label="PP_4190"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4190"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4190"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746307.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FA8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4192" sboTerm="SBO:0000243" fbc:id="PP_4192" fbc:label="PP_4192"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4192"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4192"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746309.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FA6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4185" sboTerm="SBO:0000243" fbc:id="PP_4185" fbc:label="PP_4185"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4185"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4185"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746302.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FB3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4186" sboTerm="SBO:0000243" fbc:id="PP_4186" fbc:label="PP_4186"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4186"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4186"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746303.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FB2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2371" sboTerm="SBO:0000243" fbc:id="PP_2371" fbc:label="PP_2371"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2371"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2371"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744520.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KB9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0860" sboTerm="SBO:0000243" fbc:id="PP_0860" fbc:label="PP_0860"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0860"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0860"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743021.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PJ0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2168" sboTerm="SBO:0000243" fbc:id="PP_2168" fbc:label="PP_2168"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2168"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2168"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744317.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88KX1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0169" sboTerm="SBO:0000243" fbc:id="PP_0169" fbc:label="PP_0169"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0169"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0169"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742338.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RG1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0230" sboTerm="SBO:0000243" fbc:id="PP_0230" fbc:label="PP_0230"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0230"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0230"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742398.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RA3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1782" sboTerm="SBO:0000243" fbc:id="PP_1782" fbc:label="PP_1782"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1782"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1782"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743938.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LZ4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0265" sboTerm="SBO:0000243" fbc:id="PP_0265" fbc:label="PP_0265"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0265"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0265"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742432.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R69"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1784" sboTerm="SBO:0000243" fbc:id="PP_1784" fbc:label="PP_1784"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1784"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1784"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743940.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LZ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0500" sboTerm="SBO:0000243" fbc:id="PP_0500" fbc:label="PP_0500"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0500"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0500"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742664.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QJ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1785" sboTerm="SBO:0000243" fbc:id="PP_1785" fbc:label="PP_1785"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1785"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1785"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743941.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LZ1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1900" sboTerm="SBO:0000243" fbc:id="PP_1900" fbc:label="PP_1900"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1900"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1900"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744055.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LM9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0833" sboTerm="SBO:0000243" fbc:id="PP_0833" fbc:label="PP_0833"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0833"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0833"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742994.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PL7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1530" sboTerm="SBO:0000243" fbc:id="PP_1530" fbc:label="PP_1530"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1530"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1530"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743687.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MP1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1235" sboTerm="SBO:0000243" fbc:id="PP_1235" fbc:label="PP_1235"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1235"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1235"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743395.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NH4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0321" sboTerm="SBO:0000243" fbc:id="PP_0321" fbc:label="PP_0321"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0321"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0321"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742488.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88R13"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5149" sboTerm="SBO:0000243" fbc:id="PP_5149" fbc:label="PP_5149"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5149"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5149"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747250.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CN1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3446" sboTerm="SBO:0000243" fbc:id="PP_3446" fbc:label="PP_3446"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3446"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3446"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745584.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HB4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2465" sboTerm="SBO:0000243" fbc:id="PP_2465" fbc:label="PP_2465"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2465"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2465"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744613.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K27"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4035" sboTerm="SBO:0000243" fbc:id="PP_4035" fbc:label="PP_4035"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4035"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4035"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746163.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FQ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5105" sboTerm="SBO:0000243" fbc:id="PP_5105" fbc:label="PP_5105"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5105"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5105"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747206.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CS5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5045" sboTerm="SBO:0000243" fbc:id="PP_5045" fbc:label="PP_5045"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5045"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5045"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747146.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CY4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5104" sboTerm="SBO:0000243" fbc:id="PP_5104" fbc:label="PP_5104"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5104"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5104"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747205.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CS6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4965" sboTerm="SBO:0000243" fbc:id="PP_4965" fbc:label="PP_4965"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4965"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4965"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747068.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D62"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5141" sboTerm="SBO:0000243" fbc:id="PP_5141" fbc:label="PP_5141"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5141"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5141"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747242.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CN9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0519" sboTerm="SBO:0000243" fbc:id="PP_0519" fbc:label="PP_0519"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0519"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0519"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742682.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QH4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4783" sboTerm="SBO:0000243" fbc:id="PP_4783" fbc:label="PP_4783"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4783"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4783"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746888.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DP1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2486" sboTerm="SBO:0000243" fbc:id="PP_2486" fbc:label="PP_2486"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2486"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2486"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744634.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K07"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0920" sboTerm="SBO:0000243" fbc:id="PP_0920" fbc:label="PP_0920"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0920"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0920"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743081.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PD0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1478" sboTerm="SBO:0000243" fbc:id="PP_1478" fbc:label="PP_1478"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1478"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1478"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743636.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MU0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2490" sboTerm="SBO:0000243" fbc:id="PP_2490" fbc:label="PP_2490"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2490"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2490"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744638.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K03"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2489" sboTerm="SBO:0000243" fbc:id="PP_2489" fbc:label="PP_2489"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2489"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2489"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744637.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K04"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3173" sboTerm="SBO:0000243" fbc:id="PP_3173" fbc:label="PP_3173"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3173"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3173"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745317.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I29"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1254" sboTerm="SBO:0000243" fbc:id="PP_1254" fbc:label="PP_1254"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1254"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1254"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743414.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NF7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3588" sboTerm="SBO:0000243" fbc:id="PP_3588" fbc:label="PP_3588"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3588"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3588"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745724.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GX9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="pWW0_127" sboTerm="SBO:0000243" fbc:id="pWW0_127" fbc:label="pWW0_127"/> <fbc:geneProduct metaid="PP_4715" sboTerm="SBO:0000243" fbc:id="PP_4715" fbc:label="PP_4715"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4715"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4715"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746823.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DV4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0786" sboTerm="SBO:0000243" fbc:id="PP_0786" fbc:label="PP_0786"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0786"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0786"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742947.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PR2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0082" sboTerm="SBO:0000243" fbc:id="PP_0082" fbc:label="PP_0082"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0082"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0082"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742252.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RP7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0083" sboTerm="SBO:0000243" fbc:id="PP_0083" fbc:label="PP_0083"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0083"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0083"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742253.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RP6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1311" sboTerm="SBO:0000243" fbc:id="PP_1311" fbc:label="PP_1311"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1311"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1311"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743471.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NA1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4299" sboTerm="SBO:0000243" fbc:id="PP_4299" fbc:label="PP_4299"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4299"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4299"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746415.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88F01"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4983" sboTerm="SBO:0000243" fbc:id="PP_4983" fbc:label="PP_4983"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4983"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4983"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747085.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D45"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0436" sboTerm="SBO:0000243" fbc:id="PP_0436" fbc:label="PP_0436"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0436"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0436"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742602.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QQ2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3630" sboTerm="SBO:0000243" fbc:id="PP_3630" fbc:label="PP_3630"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3630"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3630"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745766.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GT7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1601" sboTerm="SBO:0000243" fbc:id="PP_1601" fbc:label="PP_1601"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1601"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1601"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743758.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MH0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1332" sboTerm="SBO:0000243" fbc:id="PP_1332" fbc:label="PP_1332"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1332"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1332"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743491.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N81"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1805" sboTerm="SBO:0000243" fbc:id="PP_1805" fbc:label="PP_1805"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1805"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1805"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743960.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1811" sboTerm="SBO:0000243" fbc:id="PP_1811" fbc:label="PP_1811"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1811"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1811"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743966.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LW6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1603" sboTerm="SBO:0000243" fbc:id="PP_1603" fbc:label="PP_1603"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1603"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1603"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743760.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MG8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0964" sboTerm="SBO:0000243" fbc:id="PP_0964" fbc:label="PP_0964"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0964"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0964"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743125.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P88"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1337" sboTerm="SBO:0000243" fbc:id="PP_1337" fbc:label="PP_1337"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1337"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1337"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743496.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N76"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1335" sboTerm="SBO:0000243" fbc:id="PP_1335" fbc:label="PP_1335"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1335"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1335"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743494.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N78"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1338" sboTerm="SBO:0000243" fbc:id="PP_1338" fbc:label="PP_1338"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1338"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1338"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743497.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N75"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1904" sboTerm="SBO:0000243" fbc:id="PP_1904" fbc:label="PP_1904"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1904"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1904"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744059.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2862" sboTerm="SBO:0000243" fbc:id="PP_2862" fbc:label="PP_2862"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2862"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2862"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745006.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IY7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1595" sboTerm="SBO:0000243" fbc:id="PP_1595" fbc:label="PP_1595"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1595"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1595"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743752.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MH6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3129" sboTerm="SBO:0000243" fbc:id="PP_3129" fbc:label="PP_3129"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3129"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3129"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745273.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I72"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0551" sboTerm="SBO:0000243" fbc:id="PP_0551" fbc:label="PP_0551"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0551"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0551"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742714.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QE3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4288" sboTerm="SBO:0000243" fbc:id="PP_4288" fbc:label="PP_4288"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4288"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4288"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746404.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/P59285"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1333" sboTerm="SBO:0000243" fbc:id="PP_1333" fbc:label="PP_1333"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1333"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1333"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743492.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N80"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1343" sboTerm="SBO:0000243" fbc:id="PP_1343" fbc:label="PP_1343"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1343"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1343"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743502.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88N71"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1803" sboTerm="SBO:0000243" fbc:id="PP_1803" fbc:label="PP_1803"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1803"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1803"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743958.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88LX4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0547" sboTerm="SBO:0000243" fbc:id="PP_0547" fbc:label="PP_0547"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0547"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0547"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742710.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88QE7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1593" sboTerm="SBO:0000243" fbc:id="PP_1593" fbc:label="PP_1593"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1593"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1593"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743750.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MH8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0188" sboTerm="SBO:0000243" fbc:id="PP_0188" fbc:label="PP_0188"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0188"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0188"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742357.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RE3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2090" sboTerm="SBO:0000243" fbc:id="PP_2090" fbc:label="PP_2090"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2090"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2090"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744240.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L45"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0187" sboTerm="SBO:0000243" fbc:id="PP_0187" fbc:label="PP_0187"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0187"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0187"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742356.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RE4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5074" sboTerm="SBO:0000243" fbc:id="PP_5074" fbc:label="PP_5074"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5074"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5074"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747175.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CV6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4997" sboTerm="SBO:0000243" fbc:id="PP_4997" fbc:label="PP_4997"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4997"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4997"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747099.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88D31"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0746" sboTerm="SBO:0000243" fbc:id="PP_0746" fbc:label="PP_0746"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0746"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0746"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742907.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PV2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0745" sboTerm="SBO:0000243" fbc:id="PP_0745" fbc:label="PP_0745"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0745"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0745"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742906.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88PV3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3992" sboTerm="SBO:0000243" fbc:id="PP_3992" fbc:label="PP_3992"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3992"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3992"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746122.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88FU0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4643" sboTerm="SBO:0000243" fbc:id="PP_4643" fbc:label="PP_4643"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4643"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4643"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746752.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E25"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5033" sboTerm="SBO:0000243" fbc:id="PP_5033" fbc:label="PP_5033"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5033"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5033"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747134.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CZ6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2844" sboTerm="SBO:0000243" fbc:id="PP_2844" fbc:label="PP_2844"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2844"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2844"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744988.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J05"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2846" sboTerm="SBO:0000243" fbc:id="PP_2846" fbc:label="PP_2846"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2846"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2846"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744990.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J03"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2845" sboTerm="SBO:0000243" fbc:id="PP_2845" fbc:label="PP_2845"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2845"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2845"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744989.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J04"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2847" sboTerm="SBO:0000243" fbc:id="PP_2847" fbc:label="PP_2847"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2847"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2847"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744991.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J02"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2848" sboTerm="SBO:0000243" fbc:id="PP_2848" fbc:label="PP_2848"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2848"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2848"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744992.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J01"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2842" sboTerm="SBO:0000243" fbc:id="PP_2842" fbc:label="PP_2842"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2842"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2842"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744986.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J07"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2849" sboTerm="SBO:0000243" fbc:id="PP_2849" fbc:label="PP_2849"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2849"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2849"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744993.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J00"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2843" sboTerm="SBO:0000243" fbc:id="PP_2843" fbc:label="PP_2843"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2843"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2843"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744987.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J06"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4302" sboTerm="SBO:0000243" fbc:id="PP_4302" fbc:label="PP_4302"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4302"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4302"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746418.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EZ8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4841" sboTerm="SBO:0000243" fbc:id="PP_4841" fbc:label="PP_4841"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4841"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4841"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746946.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DI4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4845" sboTerm="SBO:0000243" fbc:id="PP_4845" fbc:label="PP_4845"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4845"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4845"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746950.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4844" sboTerm="SBO:0000243" fbc:id="PP_4844" fbc:label="PP_4844"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4844"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4844"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746949.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DI1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4843" sboTerm="SBO:0000243" fbc:id="PP_4843" fbc:label="PP_4843"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4843"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4843"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746948.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DI2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4842" sboTerm="SBO:0000243" fbc:id="PP_4842" fbc:label="PP_4842"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4842"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4842"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746947.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88DI3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3099" sboTerm="SBO:0000243" fbc:id="PP_3099" fbc:label="PP_3099"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3099"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3099"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745243.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IA0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2902" sboTerm="SBO:0000243" fbc:id="PP_2902" fbc:label="PP_2902"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2902"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2902"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745046.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88IU7"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0977" sboTerm="SBO:0000243" fbc:id="PP_0977" fbc:label="PP_0977"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0977"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0977"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743138.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88P76"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3740" sboTerm="SBO:0000243" fbc:id="PP_3740" fbc:label="PP_3740"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3740"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3740"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745871.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GI3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3739" sboTerm="SBO:0000243" fbc:id="PP_3739" fbc:label="PP_3739"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3739"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3739"/> <rdf:li rdf:resource="http://identifiers.org/refseq/WP_049586551.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/A0A140FWI0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3357" sboTerm="SBO:0000243" fbc:id="PP_3357" fbc:label="PP_3357"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3357"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3357"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745497.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HJ9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3736" sboTerm="SBO:0000243" fbc:id="PP_3736" fbc:label="PP_3736"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3736"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3736"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745868.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GI6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3737" sboTerm="SBO:0000243" fbc:id="PP_3737" fbc:label="PP_3737"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3737"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3737"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745869.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88GI5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_5256" sboTerm="SBO:0000243" fbc:id="PP_5256" fbc:label="PP_5256"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_5256"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_5256"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_747357.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88CC5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0041" sboTerm="SBO:0000243" fbc:id="PP_0041" fbc:label="PP_0041"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0041"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0041"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742211.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RT8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2410" sboTerm="SBO:0000243" fbc:id="PP_2410" fbc:label="PP_2410"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2410"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2410"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744558.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K81"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2409" sboTerm="SBO:0000243" fbc:id="PP_2409" fbc:label="PP_2409"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2409"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2409"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744557.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K82"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2408" sboTerm="SBO:0000243" fbc:id="PP_2408" fbc:label="PP_2408"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2408"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2408"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744556.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88K83"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0120" sboTerm="SBO:0000243" fbc:id="PP_0120" fbc:label="PP_0120"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0120"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0120"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742290.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RK9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0117" sboTerm="SBO:0000243" fbc:id="PP_0117" fbc:label="PP_0117"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0117"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0117"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742287.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RL2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_0118" sboTerm="SBO:0000243" fbc:id="PP_0118" fbc:label="PP_0118"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_0118"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_0118"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_742288.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88RL1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3219" sboTerm="SBO:0000243" fbc:id="PP_3219" fbc:label="PP_3219"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3219"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3219"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745362.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HY4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1484" sboTerm="SBO:0000243" fbc:id="PP_1484" fbc:label="PP_1484"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1484"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1484"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743642.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88MT4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1722" sboTerm="SBO:0000243" fbc:id="PP_1722" fbc:label="PP_1722"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1722"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1722"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743879.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88M52"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3320" sboTerm="SBO:0000243" fbc:id="PP_3320" fbc:label="PP_3320"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3320"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3320"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745463.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HN3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4635" sboTerm="SBO:0000243" fbc:id="PP_4635" fbc:label="PP_4635"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4635"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4635"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746744.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88E33"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_4430" sboTerm="SBO:0000243" fbc:id="PP_4430" fbc:label="PP_4430"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_4430"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_4430"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_746543.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88EM4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3553" sboTerm="SBO:0000243" fbc:id="PP_3553" fbc:label="PP_3553"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3553"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3553"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745690.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88H12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3253" sboTerm="SBO:0000243" fbc:id="PP_3253" fbc:label="PP_3253"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3253"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3253"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745396.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88HV0"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2125" sboTerm="SBO:0000243" fbc:id="PP_2125" fbc:label="PP_2125"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2125"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2125"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744274.3"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88L12"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_1110" sboTerm="SBO:0000243" fbc:id="PP_1110" fbc:label="PP_1110"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_1110"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_1110"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_743271.2"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88NU4"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_3136" sboTerm="SBO:0000243" fbc:id="PP_3136" fbc:label="PP_3136"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_3136"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_3136"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_745280.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88I65"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2791" sboTerm="SBO:0000243" fbc:id="PP_2791" fbc:label="PP_2791"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2791"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2791"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744935.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J58"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2792" sboTerm="SBO:0000243" fbc:id="PP_2792" fbc:label="PP_2792"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#PP_2792"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.genes/ppu:PP_2792"/> <rdf:li rdf:resource="http://identifiers.org/refseq/NP_744936.1"/> <rdf:li rdf:resource="http://identifiers.org/uniprot/Q88J57"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </fbc:geneProduct> <fbc:geneProduct metaid="PP_2793" sboTerm="SBO:0000243" fbc:id="PP_2793" fbc:label="PP_2793">