AME9.4standardFriAug14201229GMT2009node00003node00004node00007node00202node00203node00204truetriffid10truefractional_coverstruefn191,102,114,97,99,116,105,111,110,97,108,95,99,111,118,101,114,93array15fractional_covernode00313node00314node00315node00316node00317node00318node00319node00320node00321node00322node00323node00324node00325node00326node00327node00328node00329node00330node00331node00332node00333node00334node00335node00336node00337node00338node00339true#ffff9dSoil carbon0Values guessed. Should be seasonally and spatially varying.truesoil_temperatureInitial values guessed.trueCsoiltruefn14911truecd1truefn2115,117,109,40,91,116,111,116,97,108,95,108,105,116,116,101,114,102,97,108,108,93,411sumtotal_litterfalltruecd2truefn3115,112,101,99,105,102,105,99,95,115,111,105,108,95,114,101,115,112,42,67,115,111,105,108,42,116,101,109,112,95,109,117,108,116,42,109,111,105,115,116,117,114,101,95,109,117,108,1161specific_soil_respCsoiltemp_multmoisture_multtruefn1_049,48int10See equations 16 and 19-21, and associated text. Units? - values guessed.trueVolumetric soil moisture concentrationsoil_moisturetruefn2_048,46,5310.5Units: 1/s Value taken from text folliwng equation 16truespecific_soil_resptruefn3_05*10^ -915109truetemp_multtruefn450,46,48,94,40,48,46,49,42,40,115,111,105,108,95,116,101,109,112,101,114,97,116,117,114,101,45,50,53,41,4112.00.1soil_temperature25truemoisture_multtruefn5105,102,32,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,62,111,112,116,105,109,117,109,95,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,32,116,104,101,110,32,49,45,48,46,56,42,40,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,45,111,112,116,105,109,117,109,95,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,41,32,101,108,115,101,105,102,32,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,60,61,119,105,108,116,105,110,103,95,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,32,116,104,101,110,32,48,46,50,32,101,108,115,101,32,48,46,50,43,48,46,56,42,40,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,45,119,105,108,116,105,110,103,95,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,41,47,40,111,112,116,105,109,117,109,95,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,45,119,105,108,116,105,110,103,95,115,111,105,108,95,109,111,105,115,116,117,114,101,95,102,114,97,99,116,41110.8soil_moisture_fractoptimum_soil_moisture_fractgtsoil_moisture_fractoptimum_soil_moisture_fract0.2leqsoil_moisture_fractwilting_soil_moisture_fract0.20.8soil_moisture_fractwilting_soil_moisture_fractoptimum_soil_moisture_fractwilting_soil_moisture_fracttruewilting_soil_moisturetruefn648,46,5010.2truesaturation_soil_moisturetruefn749,46,4811.0truesoil_moisture_fracttruefn8115,111,105,108,95,109,111,105,115,116,117,114,101,47,115,97,116,117,114,97,116,105,111,110,95,115,111,105,108,95,109,111,105,115,116,117,114,1011soil_moisturesaturation_soil_moisturetruewilting_soil_moisture_fracttruefn9119,105,108,116,105,110,103,95,115,111,105,108,95,109,111,105,115,116,117,114,101,47,115,97,116,117,114,97,116,105,111,110,95,115,111,105,108,95,109,111,105,115,116,117,114,1011wilting_soil_moisturesaturation_soil_moisturetrueoptimum_soil_moisture_fracttruefn1048,46,53,42,40,49,43,119,105,108,116,105,110,103,95,115,111,105,108,95,109,111,105,115,116,117,114,101,4110.51wilting_soil_moisturevar3node00008node00010node00011node00012node00013node00205node00214node00215node00216node00217node00218node00219node00220node00221node00222node00223node00224node00225node00226node00227node00228node00229node00230node00231node00232node00233node00234node00235node00236node00237node00238node00239node00240node00241node00242node00243node00244node00245node00246node00247node00248node00249node00250node00251node00252node00253node00254node00255node00256node00257node00258node00259node00260node00261node00262node00263node00264node00265node00266node00267node00268node00269node00270node00271node00272node00273node00274node00275node00276node00277node00278node00279node00280node00281node00282node00283node00284node00285node00286node00287node00288node00289node00290node00291node00292node00293node00294node00295node00296node00297node00298node00299node00300node00301node00302node00303node00304node00305node00306node00307node00308node00309node00310node00311node00312true#80ff805Plant functional type0truelitterfalltrueCroot0trueCstem0Values from Table 1. Units: kg(C)/m2trueawltrueCstemtrueCleaf0trueCleaftrueCroottruecorrectiontrueroot_turnover_rateEquation 10. Appears to apply only to trees: set to zero for non-trees?trueLeaf mortality rateleaf_mortalitytruecd1_1truefn2_048,46,50,5310.25Initial values guessed.trueCvegtruefn14911Initial values guessed.truepheno_statustruefn248,46,4910.1truecd1truefn340,49,45,112,97,114,116,105,116,105,111,110,105,110,103,95,99,111,101,102,41,42,78,80,8011partitioning_coefNPPtruecd2truefn4108,105,116,116,101,114,102,97,108,1081litterfallInitial values guessed.truefractional_covertruefn1_148,46,48,4910.01This value is exported from MOSES in the MOSES/Triffid coupled model. The values used here are guesses.trueNet primary productivity per unit areaNPPtruefn649int1truefn71Cstemstem_turnover_rateCleafleaf_turnover_rateCrootroot_turnover_ratetruefn8108,101,97,102,95,67,95,100,101,110,115,105,116,121,42,98,97,108,97,110,99,101,100,95,76,65,731leaf_C_densitybalanced_LAItruefn91Cleaf0truefn1097,119,108,42,98,97,108,97,110,99,101,100,95,76,65,73,94,40,53,47,51,411awlbalanced_LAI53Values guessed.truebalanced_LAItruefn1149int1Values taken from Table 2.trueSpecific leaf carbon density (kg(C) m-2 LAI-1)leaf_C_densitytruefn12101,108,101,109,101,110,116,40,91,48,46,48,51,55,53,44,48,46,49,44,48,46,48,50,53,44,48,46,48,53,44,48,46,48,53,93,44,105,110,100,101,120,40,49,41,411element0.03750.10.0250.050.05index1truefractional_cover_startruefn5109,97,120,40,102,114,97,99,116,105,111,110,97,108,95,99,111,118,101,114,44,48,46,48,49,411maxfractional_cover0.01truecompet_coefstruefn2_249,47,40,49,43,101,120,112,40,50,48,42,40,104,101,105,103,104,116,45,91,104,101,105,103,104,116,115,93,41,47,40,104,101,105,103,104,116,43,91,104,101,105,103,104,116,115,93,41,41,41array1511exp20heightheightsheightheightstruecompet_inhibtruefn3_2115,117,109,40,91,102,114,97,99,116,105,111,110,97,108,95,99,111,118,101,114,115,93,42,91,99,111,109,112,101,116,95,99,111,101,102,115,93,411sumfractional_coverscompet_coefsvar5From Table 1. Units: 1/yrtruecover_loss_ratetruefn4_1101,108,101,109,101,110,116,40,91,48,46,48,48,52,44,48,46,48,48,52,44,48,46,49,44,48,46,49,44,48,46,48,51,93,44,105,110,100,101,120,40,49,41,411element0.0040.0040.10.10.03index1Iuse equation 63, not equation 23. Both give an expression for height. Equation 63 is a simpler one, in terms of live stemwood carbon and LAI, both of which have simple equations (22 and 11 respectively). I can't see how equation 23 is derived, and appears to have two parameters (eta_sl and beta_wl) which do not seemed to be mentioned anywhere else.trueVegetation height (m)heighttruefn1_2108,105,118,101,95,115,116,101,109,67,47,40,48,46,48,49,42,76,65,73,411live_stemC0.01LAIvar3var4var3_0truemax_snow_albedotruefn2_3105,102,32,105,110,100,101,120,40,49,41,60,61,50,32,116,104,101,110,32,48,46,51,32,101,108,115,101,32,48,46,5610.3leqindex120.8truelive_stemCtruefn3_3Cstem/stemC_ratio1CstemstemC_ratiotruestemC_ratiotruefn4_2105,102,32,105,110,100,101,120,40,49,41,60,61,50,32,116,104,101,110,32,49,48,32,101,108,115,101,32,49int10leqindex121Equation 24trueSurface roughness (m)roughness_length_momentumtruefn5_1105,102,32,105,110,100,101,120,40,49,41,60,61,50,32,116,104,101,110,32,48,46,48,53,42,104,101,105,103,104,116,32,101,108,115,101,32,48,46,49,42,104,101,105,103,104,11610.05heightleqindex120.1heightText following equation 24trueRoughness length for scalars (heat,water, CO2)roughness_length_scalarstruefn6_048,46,49,42,114,111,117,103,104,110,101,115,115,95,108,101,110,103,116,104,95,109,111,109,101,110,116,117,10910.1roughness_length_momentumtruesnowfree_albedotruefn7_0115,111,105,108,95,97,108,98,101,100,111,42,101,120,112,40,45,49,42,108,105,103,104,116,95,101,120,116,105,110,99,116,95,99,111,101,102,42,76,65,73,41,43,109,97,120,95,99,97,110,111,112,121,95,97,108,98,101,100,111,42,40,49,45,101,120,112,40,45,49,42,108,105,103,104,116,95,101,120,116,105,110,99,116,95,99,111,101,102,42,76,65,73,41,411soil_albedoexp1light_extinct_coefLAImax_canopy_albedo1exp1light_extinct_coefLAI"The soil albedo is a geographically varying field derived from the dataset of Wilson and Henderson-Sellers (1985)" I've guessed a value of 0.2.trueSoil albedosoil_albedotruefn8_148,46,5010.2truemax_canopy_albedotruefn9_1105,102,32,105,110,100,101,120,40,49,41,60,61,50,32,116,104,101,110,32,48,46,49,32,101,108,115,101,32,48,46,5010.1leqindex120.2trueLight extinction coefficient, k (dimensionless)light_extinct_coeftruefn10_148,46,5310.5truemin_snow_albedotruefn3_4105,102,32,105,110,100,101,120,40,49,41,60,61,50,32,116,104,101,110,32,48,46,49,53,32,101,108,115,101,105,102,32,105,110,100,101,120,40,49,41,61,61,53,32,116,104,101,110,32,48,46,52,32,101,108,115,101,32,48,46,5410.15leqindex120.4eqindex150.6truecatchment_capacitytruefn4_348,46,53,43,48,46,48,53,42,76,65,7310.50.05LAItruetotal_litterfalltruefn1_4102,114,97,99,116,105,111,110,97,108,95,99,111,118,101,114,42,40,108,105,116,116,101,114,102,97,108,108,43,99,111,118,101,114,95,108,111,115,115,95,114,97,116,101,42,67,118,101,103,43,78,80,80,42,99,111,109,112,101,116,95,105,110,104,105,98,411fractional_coverlitterfallcover_loss_rateCvegNPPcompet_inhibvar2truefn13101,108,101,109,101,110,116,40,91,48,46,54,53,44,48,46,54,53,44,48,46,48,48,53,44,48,46,48,48,53,44,48,46,49,93,44,105,110,100,101,120,40,49,41,411element0.650.650.0050.0050.1index1truefn1467,115,116,101,109,48,42,99,111,114,114,101,99,116,105,111,1101Cstem0correctiontruefn1567,108,101,97,102,48,42,99,111,114,114,101,99,116,105,111,1101Cleaf0correctiontruefn1667,114,111,111,116,48,42,99,111,114,114,101,99,116,105,111,1101Croot0correctiontruefn171CvegCleaf0Cstem0Croot0trueleaf_turnover_ratetruefn18105,102,32,108,101,97,102,95,109,111,114,116,97,108,105,116,121,62,50,42,109,105,110,95,108,101,97,102,95,116,117,114,110,111,118,101,114,95,114,97,116,101,32,116,104,101,110,32,45,49,42,100,112,100,116,32,101,108,115,101,32,112,104,101,110,111,95,115,116,97,116,117,115,42,108,101,97,102,95,109,111,114,116,97,108,105,116,12111dpdtgtleaf_mortality2min_leaf_turnover_ratepheno_statusleaf_mortalityValues taken from Table 1.trueStem carbon turnove rate (yr-1)stem_turnover_ratetruefn19101,108,101,109,101,110,116,40,91,48,46,49,44,48,46,49,44,48,46,50,44,48,46,50,44,48,46,48,53,93,44,105,110,100,101,120,40,49,41,411element0.10.10.20.20.05index1truefn201min_leaf_turnover_ratetruefn1_0105,102,32,105,110,100,101,120,40,49,41,60,61,50,32,116,104,101,110,32,40,105,102,32,97,105,114,95,116,101,109,112,101,114,97,116,117,114,101,62,84,111,102,102,32,116,104,101,110,32,109,105,110,95,108,101,97,102,95,116,117,114,110,111,118,101,114,95,114,97,116,101,32,101,108,115,101,32,109,105,110,95,108,101,97,102,95,116,117,114,110,111,118,101,114,95,114,97,116,101,42,40,49,43,57,42,40,84,111,102,102,45,97,105,114,95,116,101,109,112,101,114,97,116,117,114,101,41,41,41,32,101,108,115,101,32,481min_leaf_turnover_rategtair_temperatureToffmin_leaf_turnover_rate19Toffair_temperatureleqindex120truemin_leaf_turnover_ratetrueTofftruefn3_0105,102,32,105,110,100,101,120,40,49,41,61,61,49,32,116,104,101,110,32,48,32,101,108,115,101,105,102,32,105,110,100,101,120,40,49,41,61,61,50,32,116,104,101,110,45,51,48,32,101,108,115,101,32,57,57,57int0eqindex1130eqindex12999trueair_temperaturetruefn4_050,48int20trueLAItruefn5_0112,104,101,110,111,95,115,116,97,116,117,115,42,98,97,108,97,110,99,101,100,95,76,65,731pheno_statusbalanced_LAICheck this equation. It's taken from the text following equation 25, but I'm not sure if I got the correct matching of variables.trueCold deep-snow albedodeepsnow_albedotruefn1_3109,97,120,95,115,110,111,119,95,97,108,98,101,100,111,42,101,120,112,40,45,49,42,108,105,103,104,116,95,101,120,116,105,110,99,116,95,99,111,101,102,42,76,65,73,41,43,109,105,110,95,115,110,111,119,95,97,108,98,101,100,111,42,40,49,45,101,120,112,40,45,49,42,108,105,103,104,116,95,101,120,116,105,110,99,116,95,99,111,101,102,42,76,65,73,41,411max_snow_albedoexp1light_extinct_coefLAImin_snow_albedo1exp1light_extinct_coefLAItruefn2_11partitioning_coefNPPfractional_cover_star1compet_inhibCvegtruecd2_0truepartitioning_coeftruefn8_0105,102,32,98,97,108,97,110,99,101,100,95,76,65,73,62,76,65,73,109,97,120,32,116,104,101,110,32,49,32,101,108,115,101,105,102,32,98,97,108,97,110,99,101,100,95,76,65,73,60,61,76,65,73,109,105,110,32,116,104,101,110,32,48,32,101,108,115,101,40,98,97,108,97,110,99,101,100,95,76,65,73,45,76,65,73,109,105,110,41,47,40,76,65,73,109,97,120,45,76,65,73,109,105,110,4111gtbalanced_LAILAImax0leqbalanced_LAILAIminbalanced_LAILAIminLAImaxLAIminValues from Table 1.trueLAImintruefn9_0101,108,101,109,101,110,116,40,91,51,44,51,44,49,44,49,44,49,93,44,105,110,100,101,120,40,49,41,41intelement33111index1Values from Table 1.trueLAImaxtruefn10_0101,108,101,109,101,110,116,40,91,57,44,57,44,52,44,52,44,52,93,44,105,110,100,101,120,40,49,41,41intelement99444index1truecd1_0truefn11_011leaf_drop_rategtleaf_mortality2min_leaf_turnover_rateleaf_drop_rate1pheno_statustrueleaf_drop_ratetruefn12_050,48int20truefn3_199,111,118,101,114,95,108,111,115,115,95,114,97,116,101,42,102,114,97,99,116,105,111,110,97,108,95,99,111,118,101,114,95,115,116,97,1141cover_loss_ratefractional_cover_startrueheightstruefn291,104,101,105,103,104,116,93array15heighti1i1truetotal_litterfalli2Equation 16truemicrobial_respirationi3truei3_0nonein_hierarchyCsoil1i1_0i2_0truei7_0nonein_hierarchyspecific_soil_resp1i6truei10_0nonein_hierarchytemp_mult1i8truei12nonein_hierarchysoil_temperatureinttruei11nonein_hierarchymoisture_mult1i9i14i15truei25nonein_hierarchysoil_moisture_fract1i16_0truei19_0nonein_hierarchysoil_moisture1truei20nonein_hierarchysaturation_soil_moisture1truei26nonein_hierarchywilting_soil_moisture_fract1i17truei21nonein_hierarchywilting_soil_moisture1truei22nonein_hierarchysaturation_soil_moisture1truei27nonein_hierarchyoptimum_soil_moisture_fract1i18truei24nonein_hierarchywilting_soil_moisture1truei9_0nonein_hierarchy[total_litterfall]array15truei7truei3nonein_hierarchy[fractional_cover]array15truei10i1i2trueCincreasei3trueCdecreasetruei10nonein_hierarchylitterfall1i4truecover_increasei1_2truei8nonein_hierarchyNPPinti6i9truei39nonein_hierarchyCstem1truei41nonein_hierarchyCleaf1truei43nonein_hierarchyCroot1truei44nonein_hierarchyroot_turnover_rate1i11truei16nonein_hierarchyCleaf01i12i13truei21nonein_hierarchyawl1truei17nonein_hierarchybalanced_LAIinttruei15nonein_hierarchybalanced_LAIinti14truei19nonein_hierarchyleaf_C_density1i18i8_1truei9_1nonein_hierarchyfractional_cover1i4_3i5_1truei8_2nonein_hierarchy[compet_coefs]array15truei6_1nonein_hierarchy[fractional_covers]array15i11_0truei7_1nonein_hierarchyheight1i1_3truei3_3truei5_2nonein_hierarchy[heights]array15truei2_3i2_5truei13_1nonein_hierarchylive_stemC1i8_3truei9_4nonein_hierarchyCstem1truei11_1nonein_hierarchystemC_ratiointi10_0i14_1truei15_0nonein_hierarchyheight1i16_1truei17_1nonein_hierarchyroughness_length_momentum1i18_2truei23_1nonein_hierarchysoil_albedo1i20_0truei24_1nonein_hierarchymax_canopy_albedo1i21_1truei25_1nonein_hierarchylight_extinct_coef1i22_1i3_4i8_4i1_6truei2_6nonein_hierarchylitterfall1truei3_5nonein_hierarchyCveg1truei4_6nonein_hierarchyNPPinttruei5_4nonein_hierarchycover_loss_rate1truei6_3nonein_hierarchycompet_inhib1truei7_3nonein_hierarchyfractional_cover1truei8_5i20i22truei30nonein_hierarchyCstem01truei33nonein_hierarchycorrection1i23truei31nonein_hierarchyCleaf01truei34nonein_hierarchycorrection1i24truei32nonein_hierarchyCroot01truei35nonein_hierarchycorrection1i25truei26nonein_hierarchyCstem01truei27nonein_hierarchyCleaf01truei28nonein_hierarchyCroot01truei29nonein_hierarchyCveg1truei42nonein_hierarchyleaf_turnover_rate1i36truei3_1nonein_hierarchypheno_status1truei2_1nonein_hierarchyleaf_mortality1truei1_1nonein_hierarchydpdt1truei40nonein_hierarchystem_turnover_rate1i37i38i1_0truei3_0nonein_hierarchymin_leaf_turnover_rate1truei4_0nonein_hierarchymin_leaf_turnover_rate1truei4_1nonein_hierarchymin_leaf_turnover_rate1i2_0truei6_0nonein_hierarchyToffinti5_0truei8_0nonein_hierarchyair_temperatureinti7_0truei12_3nonein_hierarchyLAI1truei19_0nonein_hierarchyLAI1truei9_5nonein_hierarchyLAI1i9_0truei2_4nonein_hierarchybalanced_LAIinttruei21_0nonein_hierarchypheno_status1truei4_5nonein_hierarchylight_extinct_coef1truei5_3nonein_hierarchymin_snow_albedo1truei6_2nonein_hierarchymax_snow_albedo1i1_5truei7_2nonein_hierarchyLAI1i2_2truei4_2nonein_hierarchyCveg1truei7nonein_hierarchyNPPinttruei10_1nonein_hierarchyfractional_cover_star1truei9_2nonein_hierarchycompet_inhib1truecover_decreasetruei5nonein_hierarchypartitioning_coef1truei18_0nonein_hierarchypartitioning_coef1truei1_4nonein_hierarchybalanced_LAIinti12_0truei16_0nonein_hierarchyLAImininti13_0truei17_0nonein_hierarchyLAImaxinti14_0truedpdti22_0truei25_0nonein_hierarchypheno_status1truei26_0nonein_hierarchyleaf_mortality1truei27_0nonein_hierarchymin_leaf_turnover_rate1truei24_0nonein_hierarchyleaf_drop_rateinti23_0i3_2truei10_2nonein_hierarchyfractional_cover_star1truei12_1nonein_hierarchycover_loss_rate1truei6i2truei4nonein_hierarchy[height]array15