<?xml version="1.0" encoding="UTF-8"?> <sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" level="3" version="1"> <model id="srimani1" name="srimani1"> <listOfCompartments> <compartment metaid="metaid_0" sboTerm="SBO:0000410" id="default" size="1" constant="false"/> </listOfCompartments> <listOfSpecies> <species metaid="metaid_1" id="ain" compartment="default" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/> <species metaid="metaid_2" id="c" compartment="default" initialConcentration="0.1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/> <species metaid="metaid_3" id="ca" compartment="default" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/> <species metaid="metaid_4" id="cap" compartment="default" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/> <species metaid="metaid_5" id="n" name="n" compartment="default" initialConcentration="0.001" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/> </listOfSpecies> <listOfParameters> <parameter metaid="metaid_6" id="V" value="1.5" constant="false"/> <parameter metaid="metaid_7" id="V1" value="0.2" constant="false"/> <parameter metaid="metaid_8" id="Vc" value="1e-09" constant="false"/> <parameter metaid="metaid_9" id="Vm" value="0.0001" constant="false"/> <parameter metaid="metaid_10" id="a0" name="a0" value="20.62" constant="false"/> <parameter metaid="metaid_11" id="d" value="120" constant="false"/> <parameter metaid="metaid_12" id="k1" value="0.2" constant="false"/> <parameter metaid="metaid_13" id="kb" value="1.5" constant="false"/> <parameter metaid="metaid_14" id="kd" value="0.1" constant="false"/> <parameter metaid="metaid_15" id="kf" value="2.5" constant="false"/> <parameter metaid="metaid_16" id="kin" value="0.007" constant="false"/> <parameter metaid="metaid_17" id="kout" value="0.01" constant="false"/> <parameter metaid="metaid_18" id="kr" value="0.02" constant="false"/> <parameter metaid="metaid_19" id="ku" value="0.1" constant="false"/> <parameter metaid="metaid_20" id="mu0" value="0.05" constant="false"/> <parameter metaid="metaid_21" id="nm" value="1" constant="false"/> </listOfParameters> <listOfReactions> <reaction metaid="metaid_23" id="v1" reversible="true" fast="false"> <listOfProducts> <speciesReference metaid="metaid_22" species="c" stoichiometry="1" constant="true"/> </listOfProducts> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <divide/> <apply> <times/> <ci> k1 </ci> <ci> c </ci> </apply> <apply> <plus/> <ci> V1 </ci> <ci> c </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_27" id="v2" reversible="true" fast="false"> <listOfReactants> <speciesReference metaid="metaid_24" species="ain" stoichiometry="1" constant="true"/> <speciesReference metaid="metaid_25" species="c" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference metaid="metaid_26" species="ca" stoichiometry="1" constant="true"/> </listOfProducts> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <ci> kf </ci> <ci> c </ci> <ci> ain </ci> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_29" id="v3" reversible="true" fast="false"> <listOfReactants> <speciesReference metaid="metaid_28" species="c" stoichiometry="1" constant="true"/> </listOfReactants> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <ci> ku </ci> <ci> c </ci> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_33" id="v4" name="v4" reversible="true" fast="false"> <listOfReactants> <speciesReference metaid="metaid_30" species="ca" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference metaid="metaid_31" species="ain" stoichiometry="1" constant="true"/> <speciesReference metaid="metaid_32" species="c" stoichiometry="1" constant="true"/> </listOfProducts> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <ci> kb </ci> <ci> ca </ci> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_35" id="v5" name="v5" reversible="true" fast="false"> <listOfProducts> <speciesReference metaid="metaid_34" species="ain" stoichiometry="1" constant="true"/> </listOfProducts> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <ci> kin </ci> <piecewise> <piece> <ci> a0 </ci> <apply> <lt/> <csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/time"> time </csymbol> <ci> d </ci> </apply> </piece> <otherwise> <cn type="integer"> 0 </cn> </otherwise> </piecewise> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_37" id="v6" reversible="true" fast="false"> <listOfReactants> <speciesReference metaid="metaid_36" species="ain" stoichiometry="1" constant="true"/> </listOfReactants> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <ci> kout </ci> <ci> ain </ci> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_40" id="v7" reversible="true" fast="false"> <listOfReactants> <speciesReference metaid="metaid_38" species="cap" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference metaid="metaid_39" species="ain" stoichiometry="1" constant="true"/> </listOfProducts> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <ci> kr </ci> <ci> cap </ci> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_43" id="v8" reversible="true" fast="false"> <listOfReactants> <speciesReference metaid="metaid_41" species="ca" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference metaid="metaid_42" species="cap" stoichiometry="1" constant="true"/> </listOfProducts> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <ci> kd </ci> <ci> ca </ci> </apply> </math> </kineticLaw> </reaction> <reaction metaid="metaid_46" id="v9" name="v9" reversible="true" fast="false"> <listOfProducts> <speciesReference metaid="metaid_44" species="n" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid="metaid_45" species="c"/> </listOfModifiers> <kineticLaw> <math xmlns="http://www.w3.org/1998/Math/MathML"> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> mu0 </ci> <ci> c </ci> </apply> <apply> <plus/> <ci> V </ci> <ci> c </ci> </apply> </apply> <ci> n </ci> <apply> <minus/> <cn type="integer"> 1 </cn> <apply> <divide/> <ci> n </ci> <ci> nm </ci> </apply> </apply> </apply> </math> </kineticLaw> </reaction> </listOfReactions> </model> </sbml>