Koenig Human Galactose Metabolism

Description

This is a metabolism model of Human galactose metabolism in SBML format.

The content of this model has been carefully created in a manual research effort.
This file has been produced by Koenig Matthias.

Terms of use

Copyright © 2016 Koenig Matthias.

Redistribution and use of any part of this model, with or without modification, are permitted provided that the following conditions are met:

  1. Redistributions of this SBML file must retain the above copyright notice, this list of conditions and the following disclaimer.
  2. Redistributions in a different form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
This model is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

Koenig Matthias konigmatt@googlemail.com Humboldt-University Berlin, Institute for Theoretical Biology 2016-05-12T14:11:37Z 2016-05-12T14:11:37Z Vol_h f_cyto Vol_h x_cell x_cell x_cell x_cell y_cell Vol_h Vol_c Vol_e A_m c__gal c__galM e__gal e__galM c__udpglc c__udpglcM c__atp c__adp 3 c__atp 2 c__adp 3 c__utp 2 c__udp c__phos 2 c__ppi c__glc1p c__glc6p c__gal1p 2 c__udpglc 2 c__udpgal c__glc1pM c__glc6pM c__gal1pM 2 c__udpglcM 2 c__udpgalM c__glc6p c__glc6pM c__gal1p c__gal1pM scale_f Vol_h c__galtol c__galtolM c__glc1p c__glc1pM c__udpgal c__udpgalM c__utp c__udp c__udpglc c__udpgal c__udpglcM c__udpgalM c__nadp c__nadph c__GALK_Vmax GALK_k_gal GALK_k_atp 1 1 c__gal1p_tot GALK_ki_gal1p 1 c__GALK_dm c__GALK_V c__gal1p_tot c__adp GALK_keq c__scale GALK_PA GALK_kcat c__GALK_P REF_P 1 c__gal_tot GALK_k_gal 1 c__atp GALK_k_atp 1 c__gal1p_tot GALK_k_gal1p 1 c__adp GALK_k_adp 1 c__GALK_V c__gal_tot c__atp 1 c__gal1p_tot IMP_k_gal1p c__IMP_Vmax IMP_k_gal1p c__gal1p_tot c__IMP_dm IMP_f c__GALK_Vmax c__IMP_P REF_P ATPS_f c__GALK_Vmax c__ATPS_P REF_P c__ALDR_V c__galtol_tot c__nadp ALDR_keq c__ALDR_Vmax ALDR_k_gal ALDR_k_nadp 1 c__ALDR_dm ALDR_f c__GALK_Vmax c__ALDR_P REF_P 1 c__gal_tot ALDR_k_gal 1 c__nadph ALDR_k_nadph 1 c__galtol_tot ALDR_k_galtol 1 c__nadp ALDR_k_nadp 1 c__ALDR_V c__gal_tot c__nadph NADPR_f c__ALDR_Vmax c__NADPR_P REF_P c__GALT_V c__gal1p_tot c__udpglc_tot c__GALT_Vmax GALT_k_gal1p GALT_k_udpglc 1 c__GALT_dm c__GALT_P REF_P GALT_f c__GALK_Vmax GALT_vm c__GALT_V c__glc1p_tot c__udpgal_tot GALT_keq 1 c__gal1p_tot GALT_k_gal1p 1 c__udpglc_tot GALT_k_udpglc c__udp GALT_ki_udp c__utp GALT_ki_utp 1 c__glc1p_tot GALT_k_glc1p 1 c__udpgal_tot GALT_k_udpgal 1 c__GALE_V c__udpgal_tot GALE_keq c__GALE_Vmax GALE_k_udpglc 1 c__GALE_dm GALE_f c__GALK_Vmax GALE_PA GALE_kcat c__GALE_P REF_P 1 c__udpglc_tot GALE_k_udpglc c__udpgal_tot GALE_k_udpgal c__GALE_V c__udpglc_tot c__UGP_V c__glc1p_tot c__utp c__UGP_Vmax UGP_k_utp UGP_k_glc1p 1 c__UGP_dm UGP_f c__GALK_Vmax c__UGP_P REF_P 1 c__utp UGP_k_utp c__udpglc_tot UGP_ki_udpglc 1 c__glc1p_tot UGP_k_glc1p c__gal1p_tot UGP_k_gal1p 1 c__udpglc_tot UGP_k_udpglc c__udpgal_tot UGP_k_udpgal c__utp UGP_ki_utp 1 c__ppi UGP_k_ppi 1 c__UGP_V c__udpglc_tot c__ppi UGP_keq c__UGALP_V c__udpgal_tot c__ppi UGP_keq UGALP_f c__UGP_Vmax UGP_k_utp UGP_k_gal1p 1 c__UGP_dm c__UGALP_V c__gal1p_tot c__utp PPASE_f c__UGP_Vmax c__PPASE_P REF_P NDKU_f c__UGP_Vmax c__NDKU_P REF_P c__PGM1_V c__glc6p_tot PGM1_keq c__PGM1_Vmax PGM1_k_glc1p 1 c__PGM1_dm PGM1_f c__GALK_Vmax c__PGM1_P REF_P 1 c__glc1p_tot PGM1_k_glc1p c__glc6p_tot PGM1_k_glc6p c__PGM1_V c__glc1p_tot GLY_f c__PGM1_Vmax c__GLY_P REF_P c__GTF_Vmax GTF_k_udpgal c__udpgal_tot 1 c__udpgal_tot GTF_k_udpgal GTF_f c__GALK_Vmax c__GTF_P REF_P 0 c__GTF_Vmax GTF_k_udpglc c__udpglc_tot 1 c__udpglc_tot GTF_k_udpglc H2OT_f Nf c__scale c__GLUT2_Vmax GLUT2_k_gal 1 1 e__gal_tot GLUT2_k_gal c__gal_tot GLUT2_k_gal GLUT2_f Nf c__scale c__GLUT2_P REF_P c__gal c__gal_tot c__GALK_Vf c__gal1p c__gal1p_tot c__GALK_Vb c__galM c__gal_tot c__GALK_Vf c__gal1pM c__gal1p_tot c__GALK_Vb c__gal1p c__gal1p_tot c__IMP_Vf c__gal1pM c__gal1p_tot c__IMP_Vf c__ATPS_Vmax ATPS_k_adp ATPS_k_phos c__adp c__phos c__atp ATPS_keq 1 c__adp ATPS_k_adp 1 c__phos ATPS_k_phos c__atp ATPS_k_atp c__gal c__gal_tot c__ALDR_Vf c__galtol c__galtol_tot c__ALDR_Vb c__galM c__gal_tot c__ALDR_Vf c__galtolM c__galtol_tot c__ALDR_Vb c__NADPR_Vmax NADPR_k_nadp c__nadp c__nadph NADPR_keq 1 c__nadp NADPR_k_nadp c__nadph NADPR_ki_nadph c__gal1p c__gal1p_tot c__udpglc c__udpglc_tot c__GALT_Vf c__glc1p c__glc1p_tot c__udpgal c__udpgal_tot c__GALT_Vb c__gal1pM c__gal1p_tot c__udpglc c__udpglc_tot c__GALT_Vf c__glc1p c__glc1p_tot c__udpgalM c__udpgal_tot c__GALT_Vb c__gal1p c__gal1p_tot c__udpglcM c__udpglc_tot c__GALT_Vf c__glc1pM c__glc1p_tot c__udpgal c__udpgal_tot c__GALT_Vb c__gal1pM c__gal1p_tot c__udpglcM c__udpglc_tot c__GALT_Vf c__glc1pM c__glc1p_tot c__udpgalM c__udpgal_tot c__GALT_Vb c__udpglc c__udpglc_tot c__GALE_Vf c__udpgal c__udpgal_tot c__GALE_Vb c__udpglcM c__udpglc_tot c__GALE_Vf c__udpgalM c__udpgal_tot c__GALE_Vb c__glc1p c__glc1p_tot c__UGP_Vf c__udpglc c__udpglc_tot c__UGP_Vb c__glc1pM c__glc1p_tot c__UGP_Vf c__udpglcM c__udpglc_tot c__UGP_Vb c__gal1p c__gal1p_tot c__UGALP_Vf c__udpgal c__udpgal_tot c__UGALP_Vb c__gal1pM c__gal1p_tot c__UGALP_Vf c__udpgalM c__udpgal_tot c__UGALP_Vb c__PPASE_Vmax c__ppi PPASE_n c__ppi PPASE_n PPASE_k_ppi PPASE_n c__NDKU_Vmax NDKU_k_atp NDKU_k_udp c__atp c__udp c__adp c__utp NDKU_keq 1 c__atp NDKU_k_atp 1 c__udp NDKU_k_udp 1 c__adp NDKU_k_adp 1 c__utp NDKU_k_utp 1 c__glc1p c__glc1p_tot c__PGM1_Vf c__glc6p c__glc6p_tot c__PGM1_Vb c__glc1pM c__glc1p_tot c__PGM1_Vf c__glc6pM c__glc6p_tot c__PGM1_Vb c__GLY_Vmax GLY_k_glc6p c__glc6p GLY_k_glc6p c__phos c__phos GLY_k_p c__GLY_Vmax GLY_k_glc6p c__glc6pM c__phos c__phos GLY_k_p c__udpgal c__udpgal_tot c__GTFGAL_Vf c__udpgalM c__udpgal_tot c__GTFGAL_Vf c__udpglc c__udpglc_tot c__GTFGLC_Vf c__udpglcM c__udpglc_tot c__GTFGLC_Vf c__H2OT_Vmax H2OT_k e__h2oM h__h2oM c__GLUT2_V e__gal c__gal c__GLUT2_V e__galM c__galM