Events

52 Events visible to you, out of a total of 184

This mini-symposium, colocated at the ECMTB in Gothenburg, presents the state-of-the-art in computational methods for multicellular systems biology. It brings together developers and users of this software to identify common approaches and future challenges concerning multiscale integration, model specification, model exchange, scalability, workflow management as well as compliance to standards and guidelines. The session thus aims to provide an overview of the available modeling and simulation
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Start Date: 19th Jun 2014

End Date: 19th Jun 2014

Event Website: https://imc.zih.tu-dresden.de/wiki/multisysbio2014/

Country:  SE

City: Gothenburg

Aim
Multicellular spatial models have become an essential tool in quantitative biology and multiple model formalisms and simulation frameworks coexist. Progress towards software interoperability and reproducibility requires a novel model description language and conversion library, complementing SBML. Building on the community‘s practical experiences with multiple formalisms and simulators, we aim at (1) defining the concept for a multicellular language while simultaneously (2) exploring automated
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Start Date: 1st Sep 2019

End Date: 4th Sep 2019

Event Website: https://multicellml.org/wiki/doku.php?id=hackathon

Country:  DE

City: Dresden

Here we collect all the presentations, hands on instructions and documentation for Kinetics on the move Workshop on Data for Computational Modeling

Country: Not specified

City: Heidelberg

FAIRDOM PALS and users meeting 2019 is happening in Heidelberg, as a satellite meeting of the COMBINE (COmputational Modeling in BIology Network) meeting.
FAIRDOM is a research infrastructure offering data management support. The SEEK software is designed as registry and storage place for data, models, biological samples, processes, publications and presentations, and at the same time as yellow pages for projects, people and events. SEEK is implemented as central data management platform FAIRDOMhub
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Start Date: 18th Jul 2019

End Date: 19th Jul 2019

Event Website: https://fair-dom.org/events/fairdom-pals-users-meeting-2019/

Country:  DE

City: Heidelberg

The first Digital Salmon industry workshop raised awareness of the Digital Salmon vision and engaged major industry players in discussions on data sharing and reuse, guidelines and best practices for private-public collaboration. The workshop was a success, and a Digital Salmon working group was formed, comprising industry, academia and funding bodies. Its first task is to develop a white paper to be presented to the industry in summer of 2020.

Start Date: 5th Jun 2019

End Date: 6th Jun 2019

Event Website: Not specified

Country:  NO

City: Ski

During this 3-day course, attendees will learn basic techniques for modeling of biochemical networks including data access and storage due to the FAIR principles. The first day introduces kinetic modeling techniques which will be illustrated and exercised with COPASI. The second day continues with principles of stoichiometric and constraint-based modeling coupled with hands on exercises using CellNetAnalyzer. The third day SABIO-RK is used as a resource for kinetic data and FAIRDOMHub/SEEK is
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Start Date: 18th Mar 2019

End Date: 20th Mar 2019

Event Website: http://copasi.org/denbi-modsim/workshop_2019/

Country:  DE

City: 69120 Heidelberg

During this 3-day course, attendees will learn basic techniques for modeling of biochemical networks including data access and storage due to the FAIR principles. The first day introduces principles of stoichiometric and constraint-based modeling coupled with hands on exercises using CellNetAnalyzer. The second day continues with kinetic modeling techniques which will be illustrated and exercised with COPASI. The third day SABIO-RK is used as a resource for kinetic data and FAIRDOM Hub/SEEK is
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Start Date: 24th Apr 2018

End Date: 26th Apr 2018

Event Website: http://denbi-modsim.de/workshop_2018

Country:  DE

City: 39106 Magdeburg

This is just a placeholder, to be edited

Start Date: 1st Jun 2016

End Date: Not specified

Event Website: Not specified

Country:  CH

City: Zurich

Approximate dates of plant growth and harvesting by Sarah Hodge and Andrew Millar, University of Edinburgh

Start Date: 1st Jun 2016

End Date: 1st Jul 2016

Event Website: https://www.amillar.org

Country:  GB

City: Edinburgh

Approximate dates of plant growth and harvesting by Imaizumi lab, University of Washington in Seattle

Start Date: 1st Jun 2014

End Date: 1st Jul 2017

Event Website: Not specified

Country:  US

City: Seattle

The 10th Young Scientists School “Systems biology and Bioinformatics” SBB-2018 will be held on 27–31th of August 2018 in Novosibirsk, Russia
Bioinformatics is a rapidly developing field of knowledge. Each of the past Young Scientists Schools concerned topics urgent at those times. To preserve this tradition, the SBB-2016 will be dedicated to bioinformatics and systems biology in such areas as:
Genomics and evolutionary bioinformatics
Structural biology and molecular dynamics
Molecular-genetic
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Start Date: 27th Aug 2018

End Date: 31st Aug 2018

Event Website: http://conf.bionet.nsc.ru/sbb2018/en/

Country:  RU

City: Novosibirsk

No description specified

Start Date: 6th Aug 2017

End Date: 6th Aug 2017

Event Website: http://co.mbine.org/events/tutorial2017

Country:  US

City: Blacksburg, Virginia

Participants will learn how to structure and share complex data in a Findable, Accessible, Interoperable and Reusable (FAIR) manner. Hands-on sessions, lectures and software demonstrations will provide attendees with the necessary skills to apply components of the FAIRDOM infrastructure in their daily work for interrelating and exchanging data, models and corresponding information.

FAIRDOM is a research infrastructure offering data management support. The SEEK software is designed as registry and
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Start Date: 4th Jul 2018

End Date: 4th Jul 2018

Event Website: http://www.sbmc2018.de/workshops

Country:  DE

City: Bremen

The overarching integrating power of computational modelling, from systems biology to systems medicine

Start Date: 4th Jul 2018

End Date: 6th Jul 2018

Event Website: http://www.sbmc2018.de

Country:  DE

City: Bremen

The 16th conference on Computational Methods in Systems Biology (CMSB 2018) will take place on the 12th to 14th September 2018 in Brno, Czech Republic. Its aim is to bring together researchers from across biological, mathematical, computational, and physical sciences who are interested in the study, modelling, simulation, advanced analysis, and design of biological systems.

CMSB 2018 will be hosted at Faculty of Informatics, Masaryk University, Brno. Brno is the city where the modern genetics has
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Start Date: 12th Sep 2018

End Date: 14th Sep 2018

Event Website: https://cmsb2018.fi.muni.cz/

Country:  CZ

City: Brno

Abstracts and posters from DigiSal for Digital Life 2018.

Start Date: 20th Mar 2018

End Date: 21st Mar 2018

Event Website: https://digitallifenorway.org/arrangementer/digitallife-2018

Country:  NO

City: Bergen

Our 2018 DigiSal project meeting is held as a satellite meeting of Digital Life 2018 (https://digitallifenorway.org/arrangementer/digitallife-2018).

Most of DS18 will be spent on breakout sessions to work on upcoming publications. Task leaders will prepare:

* Abstracts to DLN18. (Deadline was 15 Feb.) Presenting DigiSal progress here rather than at DS18 frees up time for the paper preparation sessions.

* Identify two papers in preparation, which will be worked on at DS18: Title, first and
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Start Date: 21st Mar 2018

End Date: 22nd Mar 2018

Event Website: Not specified

Country:  NO

City: Bergen

We are excited to announce our 2017 SynBio Data Management Training Day. The event is co-located with Synthetic Biology UK, in Manchester. The venue will be the Manchester Institute for Biotechnology (http://www.mib.ac.uk/contact/).

Topics that will be covered include
- Model management in FAIRDOMHub
- Publishing using FAIRDOMHub
- Samples in FAIRODMHub

On top of this we will have talks about general data management using FAIRDOM, and also smart publications.

Participation is free. We have limited
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Start Date: 29th Nov 2017

End Date: 29th Nov 2017

Event Website: https://fair-dom.org/synbiotraining

Country:  GB

City: Manchester

Target audience: Wet-lab scientists and people dealing with experimental and/or clinical data for research

Topics include:
- Best practice data structuring (spreadsheets) for experimental and (clinical) samples data
- Comprehensive and unambiguous data description and annotation
- Standard formats and terminologies for data and metadata
- Guidelines for reporting data (Minimum information standards)
- Annotation tools (e.g. RightField: http://www.rightfield.org.uk)
- Using SEEK & FAIRDOMhub
...

Start Date: 22nd Nov 2017

End Date: 23rd Nov 2017

Event Website: Not specified

Country:  DE

City: Hünfeld

No description specified

Start Date: 28th Oct 2018

End Date: 1st Nov 2018

Event Website: http://www.biosyl.org/news/icsb-2018

Country:  FR

City: Lyon

The second project review meeting took place on May 24-25, 2016, at the University of Luxembourg, Luxembourg. This was a theory meeting between the team members to discuss research progress and plans for the project.

Start Date: 24th May 2016

End Date: 25th May 2016

Event Website: http://wwwen.uni.lu/lcsb

Country:  Luxembourg

City: Luxembourg

The kickoff meeting of CropClock team took place in November 12, 2014 at the Max Plank Institute (MPIPZ, http://www.mpipz.mpg.de/en), Kologne, Germany. The goal for this meeting was for the members of the various teams to get acquainted with each other’s expertise and to discuss the following items: 1) Logistics about the project start, 2) Data that need to be shared, 3) Matlab code that needs to shared among the teams.
The initial plan of action for data sharing was also laid out.

Start Date: 12th Nov 2014

End Date: 12th Nov 2014

Event Website: http://www.mpipz.mpg.de/en

Country:  Germany

City: Kologne

No description specified

Start Date: 16th May 2017

End Date: 17th May 2017

Event Website: http://seek.lisym.org/events/3

Country:  Germany

City: Dresden

This event is a jointly organized Data Management PALs Meeting that involves PALs from the German LiSyM (Liver Systems Medicine) network and from the ERASysAPP (ERA-Net for Systems Biology Applications) initiative. PALs (Project Area Liaisons) are the front line experts of the data management teams of these projects. They act as data management advocates and help gathering user requirements and testing potential data management solutions. An important part of the meeting will be to gather the
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Start Date: 2nd May 2017

End Date: 3rd May 2017

Event Website: Not specified

Country:  Germany

City: 36088 Hünfeld bei Fulda

The meeting will provide a great opportunity for discussion between modellers, experimentalists and clinicians and to organize and harmonize our future work within the LiSyM network on the grassroot level.

All PhD students as well as all PostDocs of the LiSyM network are kindly requested to register by February 1st

Start Date: 3rd May 2017

End Date: 5th May 2017

Event Website: https://goo.gl/forms/G39OTpkpa8uLi0qJ2

Country:  Germany

City: Hünfeld

Good data and model management improves the longevity and impact of your interdisciplinary research. FAIRDOM offers software and expertise to support you in better managing your interdisciplinary life-science projects, particularly in systems and synthetic biology. If you have never heard of data and model management, or are curious about it, or you are an expert keen to exchange ideas, our user meeting is the place for you!
At the meeting you can
- Learn why data and model management is important,
...

Start Date: 15th Sep 2016

End Date: 15th Sep 2016

Event Website: http://fair-dom.org/communities/users/barcelona-2016-first-user-meeting/

Country:  Spain

City: barcelona

FAIRDOM team is inviting all PALs to participate in the second FAIRDOM PALs meeting. The event will take place on Dec. 9-10th , 2015 in Munich, immediately after the ERAsysAPP exchange meeting scheduled for Dec 8-9th.
Beginning at 14:00 on Dec 9h, it will continue till 13:00 on Dec. 10th. Please, consider this when booking your plane/train tickets as well as hotel rooms.

The FAIRDOM team considers the meeting as an opportunity to update the PALs on available data/model management solutions, recent
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Start Date: 9th Dec 2015

End Date: 10th Dec 2015

Event Website: Not specified

Country:  Germany

City: Munich

The annual international conference on Intelligent Systems for Molecular Biology (ISMB) is the major meeting of the International Society for Computational Biology (ISCB). Over the past 22 years the ISMB conference has grown to become the world's largest bioinformatics/computational biology conference. Joining forces with the European Conference on Computational Biology (14th Annual Conference) ISMB/ECCB 2015 will be the year's most important computational biology event globally.
The conferences
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Start Date: 10th Jul 2015

End Date: 14th Jul 2015

Event Website: https://www.iscb.org/ismbeccb2015

Country:  Ireland

City: Dublin

The BBSRC has recently funded the UK Multiscale Biology network, motivated by BBSRC strategic discussions which identified ‘Multi-Scale Biology’ (MSB) as a key area of research and capability that will be at the forefront of bioscience research over the next 5-10 years. The network will aim to:
• facilitate the exploitation of areas of synergy between researchers across the UK in the broad area of multi-scale biology (MSB);
• raise awareness of the benefits of MSB;
• identify areas that are most
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Start Date: 1st Jun 2015

End Date: 1st Jun 2015

Event Website: http://www.multiscalebiology.org.uk/events/event/springboard/

Country:  United Kingdom

City: Nottingham

This workshop is for computational biologists and experimentalists who wish to learn about standards, citeable data, about how to make scientific results sustainable, available through open repositories, and about how to find and reuse other people’s works. It comprises of a mixture of lectures and hands-on sessions. We will teach you the major standards and tools that support these standards, as well as steps towards encoding and publishing reproducible modeling results. Topics include data
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Start Date: 14th Sep 2015

End Date: 15th Sep 2015

Event Website: https://sems.uni-rostock.de/reproducible-and-citable-data-and-models/

Country:  Germany

City: Rostock-Warnemünde

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