/home/administrator/conda2/envs/spades/bin/quast.py -t 30 --glimmer --rna-finding --conserved-genes-finding ./shovill/Serratia/spades.fasta --min-contig 200 --pe1 ./fq/incl615_R1.fastq --pe2 ./fq/incl615_R2.fastq -o ../quast/Serratia Version: 5.0.2 System information: OS: Linux-4.13.0-41-generic-x86_64-with-debian-stretch-sid (linux_64) Python version: 3.6.11 CPUs number: 32 Started: 2021-01-21 09:53:04 Logging to /DATB/markop/CPB/quast/Serratia/quast.log NOTICE: Output directory already exists and looks like a QUAST output dir. Existing results can be reused (e.g. previously generated alignments)! CWD: /DATB/markop/CPB/CPB_rcf_DNAseq Main parameters: MODE: default, threads: 30, minimum contig length: 200, minimum alignment length: 65, \ ambiguity: one, threshold for extensive misassembly size: 1000 Contigs: Pre-processing... ./shovill/Serratia/spades.fasta ==> spades 2021-01-21 09:53:05 Running Reads analyzer... NOTICE: Improper read names in /DATB/markop/CPB/CPB_rcf_DNAseq/fq/incl615_R1.fastq (forward reads)! Names should end with /1 (for forward reads) or /2 (for reverse reads) but @ST-E00318:496:HHWM5CCXY:2:1101:17624:1397 was found! QUAST will attempt to fix read names. NOTICE: Improper read names in /DATB/markop/CPB/CPB_rcf_DNAseq/fq/incl615_R2.fastq (reverse reads)! Names should end with /1 (for forward reads) or /2 (for reverse reads) but @ST-E00318:496:HHWM5CCXY:2:1101:17624:1397 was found! QUAST will attempt to fix read names. Logging to files /DATB/markop/CPB/quast/Serratia/reads_stats/reads_stats.log and /DATB/markop/CPB/quast/Serratia/reads_stats/reads_stats.err... Using existing flag statistics file /DATB/markop/CPB/quast/Serratia/reads_stats/spades.stat Creating total report... saved to /DATB/markop/CPB/quast/Serratia/reads_stats/reads_report.txt, reads_report.tsv, and reads_report.tex Done. 2021-01-21 09:57:43 Running Basic statistics processor... Contig files: spades Calculating N50 and L50... spades, N50 = 223393, L50 = 9, Total length = 5557743, GC % = 59.46, # N's per 100 kbp = 0.00 Drawing Nx plot... saved to /DATB/markop/CPB/quast/Serratia/basic_stats/Nx_plot.pdf Drawing cumulative plot... saved to /DATB/markop/CPB/quast/Serratia/basic_stats/cumulative_plot.pdf Drawing GC content plot... saved to /DATB/markop/CPB/quast/Serratia/basic_stats/GC_content_plot.pdf Drawing spades GC content plot... saved to /DATB/markop/CPB/quast/Serratia/basic_stats/spades_GC_content_plot.pdf Drawing Coverage histogram (bin size: 1x)... saved to /DATB/markop/CPB/quast/Serratia/basic_stats/coverage_histogram.pdf Drawing spades coverage histogram (bin size: 1x)... saved to /DATB/markop/CPB/quast/Serratia/basic_stats/spades_coverage_histogram.pdf Done. 2021-01-21 09:57:45 Running GlimmerHMM... spades /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/0.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/0.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/1.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/1.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/2.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/2.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/3.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/3.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/4.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/4.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/5.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/5.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/6.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/6.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/7.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/7.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/8.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/8.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/9.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/9.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/10.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/10.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/11.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/11.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/12.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/12.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/13.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/13.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/14.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/14.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/15.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/15.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/16.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/16.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/17.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/17.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/18.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/18.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/19.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/19.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/20.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/20.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/21.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/21.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/22.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/22.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/23.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/23.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/24.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/24.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/25.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/25.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/26.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/26.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/27.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/27.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/28.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/28.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/29.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/29.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/30.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/30.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/31.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/31.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/32.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/32.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/33.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/33.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/34.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/34.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/35.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/35.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/36.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/36.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/37.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/37.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/38.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/38.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/39.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/39.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/40.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/40.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/41.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/41.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/42.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/42.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/43.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/43.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/44.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/44.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/45.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/45.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/46.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/46.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/47.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/47.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/48.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/48.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/49.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/49.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/50.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/50.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/51.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/51.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/52.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/52.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/53.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/53.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/54.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/54.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/55.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/55.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/56.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/56.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/57.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/57.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/58.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/58.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/59.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/59.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/60.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/60.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/61.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/61.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/62.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/62.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/63.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/63.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/64.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/64.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/65.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/65.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/66.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/66.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/67.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/67.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/68.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/68.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/69.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/69.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/70.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/70.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/71.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/71.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/72.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/72.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/73.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/73.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/74.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/74.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/75.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/75.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/76.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/76.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/77.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/77.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/78.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/78.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/79.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/79.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/80.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/80.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/81.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/81.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/82.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/82.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/83.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/83.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/84.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/84.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/85.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/85.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/86.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/86.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/87.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/87.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/88.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/88.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/89.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/89.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/90.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/90.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/91.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/91.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/92.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/92.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/93.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/93.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/94.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/94.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/95.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/95.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/96.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/96.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/97.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/97.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/98.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/98.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/99.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/99.gff >> \ /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/100.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/100.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/101.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/101.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/102.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/102.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/103.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/103.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/104.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/104.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/105.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/105.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/106.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/106.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/107.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/107.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/108.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/108.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/109.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/109.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/110.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/110.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/111.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/111.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/112.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/112.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/113.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/113.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/114.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/114.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/115.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/115.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/116.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/116.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/117.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/117.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/118.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/118.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/119.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/119.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/120.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/120.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/121.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/121.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/122.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/122.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/123.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/123.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/124.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/124.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/125.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/125.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/126.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/126.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/127.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/127.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/128.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/128.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/129.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/129.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/130.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/130.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/131.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/131.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/132.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/132.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/133.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/133.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/134.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/134.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/135.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/135.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/136.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/136.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/137.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/137.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/138.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/138.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/139.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/139.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/140.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/140.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/141.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/141.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/142.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/142.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/143.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/143.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/144.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/144.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/145.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/145.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/146.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/146.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/147.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/147.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/148.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/148.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/149.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/149.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/150.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/150.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/151.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/151.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/152.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/152.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/153.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/153.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/154.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/154.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/155.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/155.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/156.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/156.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/157.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/157.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/158.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/158.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/159.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/159.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/160.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/160.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/161.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/161.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/162.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/162.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/163.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/163.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/164.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/164.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/165.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/165.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/166.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/166.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/167.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/167.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/168.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/168.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/169.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/169.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/170.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/170.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/171.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/171.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/172.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/172.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/173.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/173.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/174.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/174.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/175.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/175.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/176.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/176.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/177.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/177.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/178.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/178.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/179.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/179.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/180.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/180.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/181.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/181.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/182.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/182.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/183.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/183.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/184.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/184.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/185.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/185.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/186.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/186.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/187.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/187.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/188.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/188.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/189.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/189.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/190.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/190.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/191.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/191.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/192.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/192.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/193.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/193.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/194.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/194.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/195.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/195.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/196.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/196.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/197.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/197.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/198.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/198.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/199.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/199.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/200.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/200.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/201.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/201.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/202.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/202.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/203.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/203.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/204.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/204.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/205.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/205.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/206.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/206.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/207.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/207.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/208.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/208.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/209.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/209.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/210.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/210.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/211.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/211.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/212.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/212.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/213.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/213.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/214.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/214.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/215.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/215.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/216.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/216.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/217.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/217.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/218.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/218.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/219.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/219.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/220.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/220.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/221.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/221.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/222.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/222.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/223.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/223.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/224.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/224.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/225.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/225.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/226.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/226.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/227.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/227.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/228.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/228.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/229.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/229.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/230.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/230.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/231.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/231.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/232.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/232.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/233.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/233.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/234.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/234.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/235.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/235.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/236.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/236.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/237.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/237.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/238.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/238.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/239.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/239.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/240.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/240.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/241.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/241.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/242.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/242.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/243.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/243.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/244.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/244.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/245.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/245.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/246.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/246.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/247.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/247.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/248.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/248.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/249.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/249.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/250.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/250.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/251.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/251.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/252.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/252.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/253.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/253.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/254.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/254.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/255.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/255.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/256.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/256.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/257.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/257.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/258.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/258.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/259.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/259.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/260.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/260.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/261.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/261.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/262.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/262.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/263.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/263.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/264.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/264.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/265.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/265.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/266.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/266.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/267.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/267.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/268.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/268.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/269.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/269.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/270.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/270.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/271.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/271.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/272.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/272.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/273.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/273.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/274.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/274.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/275.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/275.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/276.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/276.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/277.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/277.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/278.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/278.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/279.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/279.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/280.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/280.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/281.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/281.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/282.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/282.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/283.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/283.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/284.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/284.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/285.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/285.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/286.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/286.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/287.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/287.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/288.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/288.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/289.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/289.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/290.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/290.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/291.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/291.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/292.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/292.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/293.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/293.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/294.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/294.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/295.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/295.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/296.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/296.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/297.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/297.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/298.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/298.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/299.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/299.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/300.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/300.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/301.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/301.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/302.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/302.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/303.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/303.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/304.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/304.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/305.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/305.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/306.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/306.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/307.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/307.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/308.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/308.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/309.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/309.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/310.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/310.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/311.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/311.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/312.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/312.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/313.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/313.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/314.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/314.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/315.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/315.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/316.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/316.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/317.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/317.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/318.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/318.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/319.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/319.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/320.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/320.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/321.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/321.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/322.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/322.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/323.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/323.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/324.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/324.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/325.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/325.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/326.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/326.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/327.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/327.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/328.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/328.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/329.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/329.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/330.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/330.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/331.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/331.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/332.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/332.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/333.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/333.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/334.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/334.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/335.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/335.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/336.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/336.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/337.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/337.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/338.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/338.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/339.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/339.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/340.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/340.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/341.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/341.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/342.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/342.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/343.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/343.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/344.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/344.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/345.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/345.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/346.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/346.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/347.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/347.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/348.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/348.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/349.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/349.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/350.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/350.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/351.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/351.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/352.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/352.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/353.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/353.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/354.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/354.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/355.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/355.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/356.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/356.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/357.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/357.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/358.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/358.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/359.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/359.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/360.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/360.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/361.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/361.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/362.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/362.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/363.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/363.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/364.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/364.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/365.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/365.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/366.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/366.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/367.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/367.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/368.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/368.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/369.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/369.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/370.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/370.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/371.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/371.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/372.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/372.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/373.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/373.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/374.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/374.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/375.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/375.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/376.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/376.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/377.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/377.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/378.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/378.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/379.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/379.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/380.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/380.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/381.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/381.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/382.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/382.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/383.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/383.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/384.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/384.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/385.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/385.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/386.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/386.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/387.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/387.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/388.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/388.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/389.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/389.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/390.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/390.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/391.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/391.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/392.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/392.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/393.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/393.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/394.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/394.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/395.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/395.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/396.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/396.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/397.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/397.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/398.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/398.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/399.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/399.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/400.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/400.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/401.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/401.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/402.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/402.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/403.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/403.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/404.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/404.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/405.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/405.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/406.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/406.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/407.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/407.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/408.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/408.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/409.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/409.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/410.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/410.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/411.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/411.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/412.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/412.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/413.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/413.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/414.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/414.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/415.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/415.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/416.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/416.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/417.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/417.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/418.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/418.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/419.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/419.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/420.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/420.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/421.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/421.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/422.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/422.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/423.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/423.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/424.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/424.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/425.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/425.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/426.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/426.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/427.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/427.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/428.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/428.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/429.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/429.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/430.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/430.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/431.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/431.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/432.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/432.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/433.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/433.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/434.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/434.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/435.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/435.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/436.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/436.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/437.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/437.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/438.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/438.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/439.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/439.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/440.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/440.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/441.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/441.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/442.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/442.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/443.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/443.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/444.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/444.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/445.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/445.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/446.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/446.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/447.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/447.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/448.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/448.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/449.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/449.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/450.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/450.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/451.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/451.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/452.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/452.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/453.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/453.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/454.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/454.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/455.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/455.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/456.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/456.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/457.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/457.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/458.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/458.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/459.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/459.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/460.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/460.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/461.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/461.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/462.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/462.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/463.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/463.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/464.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/464.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/465.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/465.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/466.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/466.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/467.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/467.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/468.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/468.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/469.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/469.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/470.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/470.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/471.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/471.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/472.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/472.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/473.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/473.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/474.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/474.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/475.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/475.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/476.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/476.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/477.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/477.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/478.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/478.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/479.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/479.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/480.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/480.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/481.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/481.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/482.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/482.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/483.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/483.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/484.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/484.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/485.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/485.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/486.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/486.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/487.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/487.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/488.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/488.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/489.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/489.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/490.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/490.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/491.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/491.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/492.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/492.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/493.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/493.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/494.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/494.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/495.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/495.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/496.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/496.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/497.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/497.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/498.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/498.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/499.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/499.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/500.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/500.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/501.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/501.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/502.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/502.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/503.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/503.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/504.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/504.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/505.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/505.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/506.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/506.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/507.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/507.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/508.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/508.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/509.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/509.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/510.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/510.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/511.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/511.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/512.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/512.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/513.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/513.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/514.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/514.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/515.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/515.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/516.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/516.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/517.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/517.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/518.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/518.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/519.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/519.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/520.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/520.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/521.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/521.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/522.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/522.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/523.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/523.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/524.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/524.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/525.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/525.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/526.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/526.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/527.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/527.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/528.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/528.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/529.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/529.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/530.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/530.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/531.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/531.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/532.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/532.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/533.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/533.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/534.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/534.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/535.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/535.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/536.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/536.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/537.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/537.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/538.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/538.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/539.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/539.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/540.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/540.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/541.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/541.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/542.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/542.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/543.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/543.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/544.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/544.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/545.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/545.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/546.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/546.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/547.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/547.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/548.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/548.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/549.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/549.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/550.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/550.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/551.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/551.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/552.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/552.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/553.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/553.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/554.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/554.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/555.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/555.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/556.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/556.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/557.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/557.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/558.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/558.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/559.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/559.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/560.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/560.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/561.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/561.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/562.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/562.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/563.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/563.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/564.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/564.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/565.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/565.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/566.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/566.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/567.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/567.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/568.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/568.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/569.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/569.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/570.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/570.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/571.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/571.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/572.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/572.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/573.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/573.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/574.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/574.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/575.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/575.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/576.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/576.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/577.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/577.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/578.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/578.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/579.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/579.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/580.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/580.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/581.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/581.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/582.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/582.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/583.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/583.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/584.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/584.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/585.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/585.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/586.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/586.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/587.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/587.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/588.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/588.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/589.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/589.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/590.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/590.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/591.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/591.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/592.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/592.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/593.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/593.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/594.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/594.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/595.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/595.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/596.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/596.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/597.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/597.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/598.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/598.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/599.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/599.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/600.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/600.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/601.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/601.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/602.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/602.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/603.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/603.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/604.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/604.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/605.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/605.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/606.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/606.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/607.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/607.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/608.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/608.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/609.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/609.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/610.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/610.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/611.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/611.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/612.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/612.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/613.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/613.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/614.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/614.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/615.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/615.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/616.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/616.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/617.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/617.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/618.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/618.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/619.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/619.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/620.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/620.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/621.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/621.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/622.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/622.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/623.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/623.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/624.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/624.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/625.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/625.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/626.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/626.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/627.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/627.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/628.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/628.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/629.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/629.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/630.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/630.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/631.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/631.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/632.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/632.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/633.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/633.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/634.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/634.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/635.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/635.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/636.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/636.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/637.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/637.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/638.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/638.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/639.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/639.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/640.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/640.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/641.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/641.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/642.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/642.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/643.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/643.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/644.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/644.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/645.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/645.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/646.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/646.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/647.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/647.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/648.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/648.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/649.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/649.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/650.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/650.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/651.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/651.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/652.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/652.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/653.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/653.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/654.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/654.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/655.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/655.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/656.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/656.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/657.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/657.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/658.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/658.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/659.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/659.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/660.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/660.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/661.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/661.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/662.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/662.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/663.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/663.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/664.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/664.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/665.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/665.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/666.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/666.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/667.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/667.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/668.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/668.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/669.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/669.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/670.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/670.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/671.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/671.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/672.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/672.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/673.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/673.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/674.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/674.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/675.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/675.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/676.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/676.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/677.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/677.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/678.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/678.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/679.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/679.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/680.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/680.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/681.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/681.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/682.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/682.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/683.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/683.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/684.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/684.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/685.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/685.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/686.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/686.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/687.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/687.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/688.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/688.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/689.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/689.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/690.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/690.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/691.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/691.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/692.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/692.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/693.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/693.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/694.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/694.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/695.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/695.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/696.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/696.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/697.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/697.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/698.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/698.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/699.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/699.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/700.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/700.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/701.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/701.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/702.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/702.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/703.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/703.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/704.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/704.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/705.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/705.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/706.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/706.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/707.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/707.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/708.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/708.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/709.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/709.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/710.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/710.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/711.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/711.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/712.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/712.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/713.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/713.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/714.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/714.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/715.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/715.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/716.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/716.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/717.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/717.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/718.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/718.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/719.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/719.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/720.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/720.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/721.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/721.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/722.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/722.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/723.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/723.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/724.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/724.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/725.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/725.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/726.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/726.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/727.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/727.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/728.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/728.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/729.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/729.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/730.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/730.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/731.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/731.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/732.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/732.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/733.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/733.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/734.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/734.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/735.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/735.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/736.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/736.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/737.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/737.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/738.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/738.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/739.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/739.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/740.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/740.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/741.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/741.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/742.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/742.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/743.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/743.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/744.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/744.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/745.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/745.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/746.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/746.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/747.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/747.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/748.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/748.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/749.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/749.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/750.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/750.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/751.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/751.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/752.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/752.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/753.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/753.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/754.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/754.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/755.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/755.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/756.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/756.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/757.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/757.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/758.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/758.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/759.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/759.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/760.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/760.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/761.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/761.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/762.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/762.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/763.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/763.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/764.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/764.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/765.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/765.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/766.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/766.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/767.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/767.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/768.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/768.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/769.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/769.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/770.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/770.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/771.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/771.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/772.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/772.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/773.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/773.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/774.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/774.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/775.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/775.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/776.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/776.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/777.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/777.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/778.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/778.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/779.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/779.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/780.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/780.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/781.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/781.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/782.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/782.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/783.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/783.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/784.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/784.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/785.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/785.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/786.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/786.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/787.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/787.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/788.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/788.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/789.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/789.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/790.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/790.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/791.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/791.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/792.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/792.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/793.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/793.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/794.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/794.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/795.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/795.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/796.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/796.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/797.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/797.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/798.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/798.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/799.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/799.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/800.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/800.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/801.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/801.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/802.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/802.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/803.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/803.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/804.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/804.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/805.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/805.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/806.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/806.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/807.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/807.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/808.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/808.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/809.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/809.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/810.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/810.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/811.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/811.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/812.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/812.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/813.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/813.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/814.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/814.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/815.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/815.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/816.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/816.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/817.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/817.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/818.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/818.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/819.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/819.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/820.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/820.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/821.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/821.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/822.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/822.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/823.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/823.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/824.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/824.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/825.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/825.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/826.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/826.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/827.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/827.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/828.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/828.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/829.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/829.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/830.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/830.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/831.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/831.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/832.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/832.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/833.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/833.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/834.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/834.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/835.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/835.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/836.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/836.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/837.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/837.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/838.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/838.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/839.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/839.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/840.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/840.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/841.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/841.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/842.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/842.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/843.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/843.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/844.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/844.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/845.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/845.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/846.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/846.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/847.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/847.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/848.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/848.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/849.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/849.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/850.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/850.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/851.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/851.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/852.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/852.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/853.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/853.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/854.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/854.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/855.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/855.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/856.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/856.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/857.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/857.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/858.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/858.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/859.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/859.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/860.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/860.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/861.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/861.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/862.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/862.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/863.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/863.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/864.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/864.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/865.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/865.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/866.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/866.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/867.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/867.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/868.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/868.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/869.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/869.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/870.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/870.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/871.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/871.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/872.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/872.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/873.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/873.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/874.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/874.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/875.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/875.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/876.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/876.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/877.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/877.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/878.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/878.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/879.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/879.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/880.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/880.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/881.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/881.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/882.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/882.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/883.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/883.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/884.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/884.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/885.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/885.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/886.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/886.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/887.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/887.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/888.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/888.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/889.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/889.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/890.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/890.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/891.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/891.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/892.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/892.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/893.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/893.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/894.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/894.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/895.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/895.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/896.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/896.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/897.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/897.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/898.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/898.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/899.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/899.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/900.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/900.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/901.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/901.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/902.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/902.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/903.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/903.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/904.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/904.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/905.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/905.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/906.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/906.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/907.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/907.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/908.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/908.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/909.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/909.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/910.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/910.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/911.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/911.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/912.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/912.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/913.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/913.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/914.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/914.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/915.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/915.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/916.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/916.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/917.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/917.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/918.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/918.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/919.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/919.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/920.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/920.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/921.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/921.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/922.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/922.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/923.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/923.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/924.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/924.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/925.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/925.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/926.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/926.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/927.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/927.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/928.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/928.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/929.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/929.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/930.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/930.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/931.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/931.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr /home/administrator/conda2/envs/spades/bin/glimmerhmm /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/932.fasta \ -d /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/glimmer/trained/arabidopsis \ -g -o /DATB/markop/CPB/quast/Serratia/predicted_genes/tmp/tmpoo6fx6ae/932.gff \ >> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr 2>> /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer.stderr Genes = 5268 unique, 5268 total Predicted genes (GFF): /DATB/markop/CPB/quast/Serratia/predicted_genes/spades_glimmer_genes.gff.gz Done. 2021-01-21 09:58:43 Running Barrnap... Logging to /DATB/markop/CPB/quast/Serratia/predicted_genes/barrnap.log... Ribosomal RNA genes = 10 Predicted genes (GFF): /DATB/markop/CPB/quast/Serratia/predicted_genes/spades.rna.gff Done. 2021-01-21 09:58:43 Running BUSCO... Logs and results will be saved under /DATB/markop/CPB/quast/Serratia/busco_stats... Done. 2021-01-21 09:59:25 Creating large visual summaries... This may take a while: press Ctrl-C to skip this step.. 1 of 2: Creating Icarus viewers... 2 of 2: Creating PDF with all tables and plots... Done 2021-01-21 09:59:27 RESULTS: Text versions of total report are saved to /DATB/markop/CPB/quast/Serratia/report.txt, report.tsv, and report.tex Text versions of transposed total report are saved to /DATB/markop/CPB/quast/Serratia/transposed_report.txt, transposed_report.tsv, and transposed_report.tex HTML version (interactive tables and plots) is saved to /DATB/markop/CPB/quast/Serratia/report.html PDF version (tables and plots) is saved to /DATB/markop/CPB/quast/Serratia/report.pdf Icarus (contig browser) is saved to /DATB/markop/CPB/quast/Serratia/icarus.html Log is saved to /DATB/markop/CPB/quast/Serratia/quast.log Finished: 2021-01-21 09:59:27 Elapsed time: 0:06:22.592720 NOTICEs: 3; WARNINGs: 0; non-fatal ERRORs: 0 Thank you for using QUAST!