{
  "id": "13390766559885",
  "status": "in progress",
  "provenance": {
    "desc_version": "3",
    "data_version": "1",
    "uploaded": {
      "by": "Anthony Hall",
      "date": "2012-06-07T14:44:15"
    },
    "modified": [
      {
        "by": "Tomasz Zielinski",
        "date": "2014-10-17T14:18:33",
        "version": "3.1"
      },
      {
        "by": "Tomasz Zielinski",
        "date": "2014-10-17T14:18:19",
        "version": "2.1"
      },
      {
        "by": "SYSTEM USER",
        "date": "2014-09-15T16:54:20"
      },
      {
        "by": "SYSTEM USER",
        "date": "2014-09-08T18:30:47"
      },
      {
        "by": "Peter Gould",
        "date": "2012-12-06T13:05:14"
      },
      {
        "by": "Anthony Hall",
        "date": "2012-09-04T13:44:12"
      },
      {
        "by": "Anthony Hall",
        "date": "2012-09-04T13:44:06"
      },
      {
        "by": "Anthony Hall",
        "date": "2012-06-07T14:48:10"
      },
      {
        "by": "Anthony Hall",
        "date": "2012-06-07T14:44:15"
      },
      {
        "by": "Anthony Hall",
        "date": "2012-06-07T14:44:15"
      }
    ]
  },
  "description_file": {
    "id": "0",
    "file_type": "description file",
    "original_name": "description file",
    "version": [
      {
        "id": "1",
        "file_type": "description file",
        "content_type": "text/xml",
        "original_name": "description file",
        "local_name": "13390766559885_dsc.1.xml",
        "local_path": "/disk/data/robust/prod-biodare/Robust/Storage/13390766559885/13390766559885_dsc.1.xml",
        "uploaded": {
          "by": "Anthony Hall",
          "date": "2012-06-07T14:48:10"
        }
      },
      {
        "id": "0",
        "file_type": "description file",
        "content_type": "text/xml",
        "original_name": "description file",
        "local_name": "13390766559885_dsc.xml",
        "local_path": "/disk/data/robust/prod-biodare/Robust/Storage/13390766559885/13390766559885_dsc.xml",
        "uploaded": {
          "by": "Anthony Hall",
          "date": "2012-06-07T14:44:15"
        }
      }
    ]
  },
  "pedro_file": {
    "id": "0",
    "file_type": "pedro file",
    "original_name": "pedro file",
    "version": {
      "id": "0",
      "file_type": "pedro file",
      "content_type": "text/xml",
      "original_name": "17CBLLREP3.xml",
      "local_name": "17CBLLREP3.xml",
      "local_path": "/disk/data/robust/prod-biodare/Robust/Storage/13390766559885/17CBLLREP3.xml",
      "uploaded": {
        "by": "Anthony Hall",
        "date": "2012-06-07T14:44:15",
        "version": "1"
      }
    }
  },
  "bibliographyFile": {
    "id": "0",
    "file_type": "BIBLIOGRAPHY",
    "original_name": "13390766559885_bibl.xml",
    "version": [
      {
        "id": "3",
        "file_type": "BIBLIOGRAPHY",
        "content_type": "text/plain",
        "original_name": "13390766559885_bibl.xml",
        "local_name": "13390766559885_bibl.1.xml",
        "local_path": "/disk/data/robust/biodare3_prod/Robust/Storage/13390766559885/13390766559885_bibl.1.xml",
        "uploaded": {
          "by": "Tomasz Zielinski",
          "date": "2014-10-17T14:18:33",
          "version": "3"
        }
      },
      {
        "id": "2",
        "file_type": "BIBLIOGRAPHY",
        "content_type": "text/plain",
        "original_name": "13390766559885_bibl.xml",
        "local_name": "13390766559885_bibl.xml",
        "local_path": "/disk/data/robust/biodare3_prod/Robust/Storage/13390766559885/13390766559885_bibl.xml",
        "uploaded": {
          "by": "Tomasz Zielinski",
          "date": "2014-10-17T14:18:19",
          "version": "2"
        }
      }
    ]
  },
  "data_file": {
    "id": "0",
    "file_type": "data file",
    "original_name": "test-17BL-rep3.xlsx",
    "version": {
      "id": "0",
      "file_type": "data file",
      "content_type": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
      "original_name": "test-17BL-rep3.xlsx",
      "local_name": "test-17BL-rep3.xlsx",
      "local_path": "/disk/data/robust/prod-biodare/Robust/Storage/13390766559885/test-17BL-rep3.xlsx",
      "uploaded": {
        "by": "Anthony Hall",
        "date": "2012-06-07T14:48:10",
        "version": "1"
      },
      "parameter": [
        {
          "name": "interval",
          "value": "2"
        },
        {
          "name": "background",
          "value": "cols"
        },
        {
          "name": "start_time",
          "value": "2.17"
        },
        {
          "name": "diff_length",
          "value": "false"
        }
      ]
    }
  },
  "std_raw_file": {
    "id": "0",
    "file_type": "data file",
    "original_name": "STANDARD_RAWDATAFILE.txt",
    "version": {
      "id": "0",
      "file_type": "data file",
      "content_type": "text/plain",
      "original_name": "STANDARD_RAWDATAFILE.txt",
      "local_name": "STANDARD_RAWDATAFILE.txt",
      "local_path": "/disk/data/robust/prod-biodare/Robust/Storage/13390766559885/STANDARD_RAWDATAFILE.txt",
      "uploaded": {
        "by": "Anthony Hall",
        "date": "2012-06-07T14:48:10"
      },
      "parameter": [
        {
          "name": "interval",
          "value": "2"
        },
        {
          "name": "background",
          "value": "cols"
        },
        {
          "name": "start_time",
          "value": "2.17"
        },
        {
          "name": "diff_length",
          "value": "false"
        }
      ]
    }
  },
  "numeric_file": {
    "id": "0",
    "file_type": "data file",
    "original_name": "STANDARD_DATAFILE.txt",
    "version": {
      "id": "0",
      "file_type": "data file",
      "content_type": "text/plain",
      "original_name": "STANDARD_DATAFILE.txt",
      "local_name": "STANDARD_DATAFILE.txt",
      "local_path": "/disk/data/robust/prod-biodare/Robust/Storage/13390766559885/STANDARD_DATAFILE.txt",
      "uploaded": {
        "by": "Anthony Hall",
        "date": "2012-06-07T14:48:10"
      },
      "parameter": [
        {
          "name": "interval",
          "value": "2"
        },
        {
          "name": "background",
          "value": "cols"
        },
        {
          "name": "start_time",
          "value": "2.17"
        },
        {
          "name": "diff_length",
          "value": "false"
        }
      ]
    }
  },
  "security": {
    "owner": "peter",
    "supervisor": "anthony",
    "allowedToRead": [
      "liverpool",
      "public",
      "robust"
    ],
    "allowedToWrite": [
      "liverpool",
      "robust"
    ]
  },
  "open_access_info": {
    "grantedBy": "anthony",
    "grantedOn": "2012-12-06T13:05:14",
    "licence": "CC_BY",
    "comment": "System generated on 17-Oct-2014"
  },
  "desc": {
    "experiment_type": "Luciferase experiment",
    "id": "13390766559885",
    "status": "in progress",
    "name": "17C BL-cryptochrome paper-rep3",
    "purpose": "Temperature-comp-photoreceptor mutants",
    "description": "17C, BL, on sucrose",
    "provenance": {
      "site": "Liverpool",
      "author": "Peter Gould",
      "start_date": "2012-06-07"
    },
    "growth_condition": {
      "name": "22C LD",
      "medium": "Agar 1.5% MS 1 3% Sucrose",
      "incubation": "3 days at 4C",
      "growth_space": "LV GR1",
      "duration": "7.0",
      "temperature_conditions": {
        "label": "const. 22.0C",
        "env_conditions": {
          "type": "constant_temp",
          "label": "const. 22.0C",
          "duration": "7",
          "env_day": {
            "type": "constant_temp",
            "label": "constant temperature",
            "duration": "7",
            "cycle_length": "24",
            "base_value": "22.0",
            "second_value": "22.0"
          }
        }
      },
      "light_conditions": {
        "label": "W: LD 12:00:12:00",
        "light_channel": {
          "spectrum": "white",
          "intensity": "80",
          "source": "tube",
          "env_conditions": {
            "type": "diurnal_light",
            "label": "LD 12:00:12:00",
            "duration": "7",
            "env_day": {
              "type": "diurnal_light",
              "label": "diurnal light",
              "duration": "7",
              "cycle_length": "24",
              "base_value": "0.0",
              "second_value": "100.0",
              "env_period": {
                "start_time": "0:00",
                "duration": "12:00"
              }
            }
          }
        }
      }
    },
    "experimental_condition": {
      "name": "17C BL",
      "medium": "Agar 1.5% MS 1 3% Sucrose",
      "growth_space": "Sanyo + LED",
      "duration": "5.0",
      "exp_time_zero": "0",
      "temperature_conditions": {
        "label": "const. 17.0C",
        "env_conditions": {
          "type": "constant_temp",
          "label": "const. 17.0C",
          "duration": "5",
          "env_day": {
            "type": "constant_temp",
            "label": "constant temperature",
            "duration": "5",
            "cycle_length": "24",
            "base_value": "17.0",
            "second_value": "17.0"
          }
        }
      },
      "light_conditions": {
        "label": "B: LL",
        "light_channel": {
          "spectrum": "blue",
          "intensity": "40",
          "source": "LED",
          "env_conditions": {
            "type": "constant_light",
            "label": "LL",
            "duration": "5",
            "env_day": {
              "type": "constant_light",
              "label": "constant light",
              "duration": "5",
              "cycle_length": "24",
              "base_value": "0.0",
              "second_value": "100.0",
              "env_period": {
                "start_time": "0:00",
                "duration": "24:00"
              }
            }
          }
        }
      }
    },
    "measurement": {
      "technique": "Luciferase luminescence",
      "equipment": "HAM 1",
      "parameters": "2x2 bin 20 min exposure",
      "param": [
        {
          "@name": "RD interval",
          "@value": "2"
        },
        {
          "@name": "RD background",
          "@value": "cols"
        },
        {
          "@name": "RD start_time",
          "@value": "2.17"
        },
        {
          "@name": "RD diff_length",
          "@value": "false"
        }
      ]
    },
    "sample_preparation": {
      "method": "spray 24h prior with 5mM LUC"
    },
    "samples": {
      "sample": [
        {
          "sample_id": "1",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4",
          "ignored": "false"
        },
        {
          "sample_id": "2",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4",
          "ignored": "false"
        },
        {
          "sample_id": "3",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4",
          "ignored": "false"
        },
        {
          "sample_id": "4",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4",
          "ignored": "false"
        },
        {
          "sample_id": "5",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "6",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "7",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "8",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "9",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "10",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "11",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "9",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "12",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "9",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "13",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "14",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "15",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "16",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "17",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "18",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "19",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2b",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "20",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2b",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "21",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "22",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "23",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "24",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "25",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "26",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "27",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "28",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "29",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "f",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "30",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "f",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "31",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "a",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "32",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "a",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "33",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "c",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        },
        {
          "sample_id": "34",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "c",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20",
          "ignored": "false"
        }
      ]
    }
  },
  "pedro": {
    "@xmlns:xsi": "http://www.w3.org/2001/XMLSchema-instance",
    "@xsi:schemaLocation": "/C:/Documents and Settings/Sarah Pottinger/Desktop/DataDescription/models/livluc_model/model/livluc_model.xsd",
    "id": "will be updated by the system",
    "status": "in progress",
    "name": "17C BL-cryptochrome paper-rep3",
    "purpose": "Temperature-comp-photoreceptor mutants",
    "description": "17C, BL, on sucrose",
    "provenance": {
      "site": "Liverpool",
      "author": "Peter Gould",
      "start_date": "2012-06-07"
    },
    "growth_condition": {
      "name": "22C LD",
      "medium": "Agar 1.5% MS 1 3% Sucrose",
      "incubation": "3 days at 4C",
      "growth_space": "LV GR1",
      "duration": "7",
      "temperature_conditions": {
        "constant_temp": {
          "cycle_length": "24",
          "base_temp": "22"
        }
      },
      "light_conditions": {
        "light_channel": {
          "spectrum": "white",
          "intensity": "80",
          "source": "tube",
          "diurnal_light": {
            "cycle_length": "24",
            "start_time": "0",
            "duration": "12"
          }
        }
      }
    },
    "experimental_condition": {
      "name": "17C BL",
      "medium": "Agar 1.5% MS 1 3% Sucrose",
      "growth_space": "Sanyo + LED",
      "duration": "5",
      "exp_time_zero": "0",
      "temperature_conditions": {
        "constant_temp": {
          "cycle_length": "24",
          "base_temp": "17"
        }
      },
      "light_conditions": {
        "light_channel": {
          "spectrum": "blue",
          "intensity": "40",
          "source": "LED",
          "constant_light": {
            "cycle_length": "24"
          }
        }
      }
    },
    "measurement": {
      "technique": "Luciferase luminescence",
      "equipment": "HAM 1",
      "parameters": "2x2 bin 20 min exposure"
    },
    "sample_preparation": {
      "method": "spray 24h prior with 5mM LUC"
    },
    "samples": {
      "sample": [
        {
          "sample_id": "1",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4"
        },
        {
          "sample_id": "2",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4"
        },
        {
          "sample_id": "3",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4"
        },
        {
          "sample_id": "4",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Img Background",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "4"
        },
        {
          "sample_id": "5",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "6",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "7",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "8",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "9",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "10",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "11",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "9",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "12",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "9",
            "provenance": "Robust Stock"
          },
          "marker": "CAB",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "13",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "14",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "15",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "16",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "3",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "17",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "18",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "4",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "19",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2b",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "20",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "Wild Type",
            "line": "2b",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "21",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "22",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "23",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "24",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "25",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "26",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "27",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "28",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "2*4;2*8;2*9;2*10",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "29",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "f",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "30",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "f",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "31",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "a",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "32",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "a",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "33",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "c",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        },
        {
          "sample_id": "34",
          "sample_type": "group of seedlings",
          "origin": "group of seedlings",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Columbia (Col)",
            "genotype": "cry1",
            "line": "c",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2",
          "growth_cond_name": "22C LD",
          "experiment_cond_name": "17C BL",
          "parameter": "20"
        }
      ]
    }
  },
  "biblio": {
    "principal": "Anthony Hall",
    "institution": "University of Liverpool",
    "author": "Peter Gould"
  }
}