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    "experiment_type": "Luciferase exp",
    "id": "12730590368619",
    "status": "finished",
    "name": "1xFRD, 4xcFR, 4xDD",
    "purpose": "testing clock response to Far Red light",
    "description": "LUC imaging 12:12 Far Red into constant FR and DD",
    "comments": "Not clear if regions are around 1 or 2 seedlings, considered only one seedling",
    "provenance": {
      "site": "Edinburgh",
      "author": "Laszlo Kozma-Bognar",
      "start_date": "2006-10-15"
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      "medium": "Agar 1.5% MS 1 3% Sucrose",
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      "duration": "5.0",
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          "source": "LED",
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            "duration": "5",
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      "medium": "Agar 1.5% MS 1 3% Sucrose",
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      "exp_time_zero": "24h",
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        "light_channel": {
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          "intensity": "8",
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            "label": "1*LD 12:00:12:00; 4*LL; 4*DD",
            "duration": "9",
            "env_day": [
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                "cycle_length": "24",
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                "second_value": "100",
                "env_period": {
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              },
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      "parameters": "imaging script starts 5 minutes before required ZT, then 55 minutes interval, 5 minutes light off, 30 minutes capture",
      "description": "Start at ZT1:09, a picture avery 2 hours"
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          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/9",
            "provenance": "Robust Stock"
          },
          "marker": "PRR9",
          "growth_cond_name": "FRD 12:12",
          "experiment_cond_name": "1xFRD, 4xcFR, 4xDD",
          "ignored": "false"
        },
        {
          "sample_id": "110",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/12",
            "provenance": "Robust Stock"
          },
          "marker": "ELF4",
          "growth_cond_name": "FRD 12:12",
          "experiment_cond_name": "1xFRD, 4xcFR, 4xDD",
          "ignored": "false"
        },
        {
          "sample_id": "111",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/12",
            "provenance": "Robust Stock"
          },
          "marker": "ELF4",
          "growth_cond_name": "FRD 12:12",
          "experiment_cond_name": "1xFRD, 4xcFR, 4xDD",
          "ignored": "false"
        },
        {
          "sample_id": "112",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/12",
            "provenance": "Robust Stock"
          },
          "marker": "ELF4",
          "growth_cond_name": "FRD 12:12",
          "experiment_cond_name": "1xFRD, 4xcFR, 4xDD",
          "ignored": "false"
        },
        {
          "sample_id": "113",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/12",
            "provenance": "Robust Stock"
          },
          "marker": "ELF4",
          "growth_cond_name": "FRD 12:12",
          "experiment_cond_name": "1xFRD, 4xcFR, 4xDD",
          "ignored": "false"
        },
        {
          "sample_id": "114",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/12",
            "provenance": "Robust Stock"
          },
          "marker": "ELF4",
          "growth_cond_name": "FRD 12:12",
          "experiment_cond_name": "1xFRD, 4xcFR, 4xDD",
          "ignored": "false"
        },
        {
          "sample_id": "115",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/12",
            "provenance": "Robust Stock"
          },
          "marker": "ELF4",
          "growth_cond_name": "FRD 12:12",
          "experiment_cond_name": "1xFRD, 4xcFR, 4xDD",
          "ignored": "false"
        }
      ]
    }
  },
  "pedro": {
    "@xmlns:xsi": "http://www.w3.org/2001/XMLSchema-instance",
    "@xsi:schemaLocation": "/Z:/communal/DataDescription/models/aluc_model/model/luc_model.xsd",
    "id": "12730590368619",
    "status": "finished",
    "name": "1xFRD, 4xcFR, 4xDD",
    "purpose": "testing clock response to Far Red light",
    "description": "LUC imaging 12:12 Far Red into constant FR and DD",
    "comments": "Not clear if regions are around 1 or 2 seedlings, considered only one seedling",
    "provenance": {
      "site": "Edinburgh",
      "author": "Laszlo Kozma-Bognar",
      "start_date": "2006-10-15"
    },
    "growth_condition": {
      "name": "FRD 12:12",
      "medium": "Agar 1.5% MS 1 3% Sucrose",
      "incubation": "4 days at 4C",
      "growth_space": "Percival + LED",
      "duration": "5",
      "comment": "entrainment",
      "temperature_conditions": {
        "constant_temp": {
          "cycle_length": "24",
          "base_temp": "22"
        }
      },
      "light_conditions": {
        "light_channel": {
          "spectrum": "infra red",
          "intensity": "8",
          "source": "LED",
          "diurnal_light": {
            "cycle_length": "24",
            "start_time": "0",
            "duration": "12"
          }
        }
      }
    },
    "experimental_condition": {
      "name": "1xFRD, 4xcFR, 4xDD",
      "medium": "Agar 1.5% MS 1 3% Sucrose",
      "growth_space": "Percival + LED",
      "duration": "9",
      "comment": "1 day 12/12 far red, 4 days constant far red, 4 days constant dark",
      "exp_time_zero": "24h",
      "temperature_conditions": {
        "constant_temp": {
          "cycle_length": "24",
          "base_temp": "22"
        }
      },
      "light_conditions": {
        "light_channel": {
          "spectrum": "infra red",
          "intensity": "8",
          "source": "LED",
          "light_complex_settings": {
            "light_days": [
              {
                "start_day": "1",
                "duration": "1",
                "diurnal_light": {
                  "cycle_length": "24",
                  "start_time": "0",
                  "duration": "12"
                }
              },
              {
                "start_day": "2",
                "duration": "4",
                "constant_light": {
                  "cycle_length": "24"
                }
              },
              {
                "start_day": "6",
                "duration": "4",
                "constant_dark": {
                  "cycle_length": "24"
                }
              }
            ]
          }
        }
      }
    },
    "measurement": {
      "technique": "Luciferase luminescence",
      "equipment": "HAM 2",
      "parameters": "imaging script starts 5 minutes before required ZT, then 55 minutes interval, 5 minutes light off, 30 minutes capture",
      "description": "Start at ZT1:09, a picture avery 2 hours"
    },
    "sample_preparation": {
      "method": "sprayed 24 hours before imaging"
    },
    "samples": {
      "sample": [
        {
          "sample_id": "1",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Blank Region",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3"
        },
        {
          "sample_id": "2",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Blank Region",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3"
        },
        {
          "sample_id": "3",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Blank Region",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3"
        },
        {
          "sample_id": "4",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Blank Region",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3"
        },
        {
          "sample_id": "5",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Blank Region",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3"
        },
        {
          "sample_id": "6",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "7",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Blank Region",
            "line": "1",
            "provenance": "Robust Stock"
          },
          "marker": "ARR3"
        },
        {
          "sample_id": "7",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "8",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "9",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "10",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "11",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "12",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "13",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "14",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "HU1",
            "provenance": "Robust Stock"
          },
          "marker": "CAB"
        },
        {
          "sample_id": "15",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "16",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "17",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "18",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "19",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "20",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "21",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "22",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCA1"
        },
        {
          "sample_id": "23",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "24",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "25",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "26",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "27",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "28",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "29",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "30",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/2",
            "provenance": "Robust Stock"
          },
          "marker": "LHY"
        },
        {
          "sample_id": "31",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "32",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "33",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "34",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "35",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "36",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "37",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "38",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "W1",
            "provenance": "Robust Stock"
          },
          "marker": "CCR2"
        },
        {
          "sample_id": "39",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
            "genotype": "Wild Type",
            "line": "/4",
            "provenance": "Robust Stock"
          },
          "marker": "GI"
        },
        {
          "sample_id": "40",
          "sample_type": "seedling",
          "origin": "seedling",
          "growth_stage": "seedling",
          "age": "5",
          "genetic_info": {
            "species": "Arabidopsis thaliana",
            "background": "Wasilewski (WS)",
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  },
  "biblio": {
    "principal": "Andrew Millar",
    "institution": "University of Edinburgh",
    "author": "Laszlo Kozma-Bognar",
    "curator": "Benedicte Wenden"
  }
}