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photoperiods, comparing Arabidopsis thaliana and Ostreococcus tauri. This expt in O. tauri compares transcriptional LUC fusions to TOC1, CAB, and LHY promoters with translational fusions to LHY and TOC promoter + protein. Each marker is on a separate plate to avoid plate-position effects.", "description": "pTOC plate 0683\npCAB plate0684\nLHY plate 0685\ncontrol plate 0686\nTOC plate0687\npLHY plate 0688", "comments": "Several controls are relevant, from parallel experiments in adjacent weeks. \nData displayed in BioDare are means of 8 cultures in a 96-well plate column, where data from each culture was normalised to its mean before averaging. 6 such columns were measured for each marker (each marker has its own plate). Raw data are shown in the 'normalised' files. Aggregated data in the 'summary.xls' file.\nNB each plate is counted in sequence, so necessarily at a different time. The four LHY/TOC1 markers are counted within 0.5h, in a total cycle time of 0.707h. For display in BioDare, the times are shown for the middle plate, TOC, but the separate files have the original, separate times.\nThe peak analysis in the publication used the averages for each column.", "local_files": "users\\Laura\\noise\\ot\\evening transitions\\sdtold 260410\\", "provenance": { "site": "Edinburgh", "author": "Laura Dixon", "start_date": "2010-04-20" }, "growth_condition": { "name": "8L:16D", "medium": "Artificial Sea Water (ASW) with Keller supplements, plus antibiotics", "growth_space": "Cabinet 1", "duration": "7.0", "comment": "White fluorescent tubes filtered with one layer of Ocean Blue gel filter.\nNB fluence rate was 10 micromol/m2/s. Earlier papers stated 20, this was incorrect.", "temperature_conditions": { "label": "const. 20.0C", "env_conditions": { "type": "constant_temp", "label": "const. 20.0C", "duration": "7", "env_day": { "type": "constant_temp", "label": "constant temperature", "duration": "7", "cycle_length": "24", "base_value": "20.0", "second_value": "20.0" } } }, "light_conditions": { "label": "W: LD 08:00:16:00", "light_channel": { "spectrum": "white", "intensity": "10", "source": "tube", "env_conditions": { "type": "diurnal_light", "label": "LD 08:00:16:00", "duration": "7", "env_day": { "type": "diurnal_light", "label": "diurnal light", "duration": "7", "cycle_length": "24", "base_value": "0.0", "second_value": "100.0", "env_period": { "start_time": "0:00", "duration": "8:00" } } } } } }, "experimental_condition": { "name": "SD to LD", "medium": "Artificial Sea Water (ASW) with Keller supplements, plus antibiotics", "growth_space": "equipment compartment", "duration": "7.0", "comment": "In the 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"LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "5", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "6", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "7", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "8", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "9", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "10", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "11", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "12", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "13", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "14", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "15", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "16", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "17", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "18", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "19", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "20", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "21", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "22", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "23", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "24", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "line": "unknown", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "ignored": "false", "param": { "@name": "TAG", "@value": "Luc" } } ] } }, "pedro": { "@xmlns:xsi": "http://www.w3.org/2001/XMLSchema-instance", "@xsi:schemaLocation": "/O:/communal/DataDescription/models/ost/model/newluc_model.xsd", "id": "will be updated by the system", "status": "finished", "name": "SDtoLD 260410", "purpose": "Re-entrainment dynamics during the transition between light:dark cycles with different photoperiods, comparing Arabidopsis thaliana and Ostreococcus tauri. This expt in O. tauri compares transcriptional LUC fusions to TOC1, CAB, and LHY promoters with translational fusions to LHY and TOC promoter + protein. Each marker is on a separate plate to avoid plate-position effects.", "description": "pTOC plate 0683\npCAB plate0684\nLHY plate 0685\ncontrol plate 0686\nTOC plate0687\npLHY plate 0688", "comments": "Several controls are relevant, from parallel experiments in adjacent weeks. \nData displayed in BioDare are means of 8 cultures in a 96-well plate column, where data from each culture was normalised to its mean before averaging. 6 such columns were measured for each marker (each marker has its own plate). Raw data are shown in the 'normalised' files. Aggregated data in the 'summary.xls' file.\nNB each plate is counted in sequence, so necessarily at a different time. The four LHY/TOC1 markers are counted within 0.5h, in a total cycle time of 0.707h. For display in BioDare, the times are shown for the middle plate, TOC, but the separate files have the original, separate times.\nThe peak analysis in the publication used the averages for each column.", "local_files": "users\\Laura\\noise\\ot\\evening transitions\\sdtold 260410\\", "provenance": { "site": "Edinburgh", "author": "Laura Dixon", "start_date": "2010-04-20" }, "growth_condition": { "name": "8L:16D", "medium": "Artificial Sea Water (ASW) with Keller supplements, plus antibiotics", "growth_space": "Cabinet 1", "duration": "7", "comment": "White fluorescent tubes filtered with one layer of Ocean Blue gel filter.\nNB fluence rate was 10 micromol/m2/s. Earlier papers stated 20, this was incorrect.", "temperature_conditions": { "constant_temp": { "cycle_length": "24", "base_temp": "20" } }, "light_conditions": { "light_channel": { "spectrum": "white", "intensity": "10", "source": "tube", "diurnal_light": { "cycle_length": "24", "start_time": "0", "duration": "8" } } } }, "experimental_condition": { "name": "SD to LD", "medium": "Artificial Sea Water (ASW) with Keller supplements, plus antibiotics", "growth_space": "equipment compartment", "duration": "7", "comment": "In the stacker of the TopCount with red and blue LEDs", "temperature_conditions": { "constant_temp": { "cycle_length": "24", "base_temp": "20" } }, "light_conditions": { "light_channel": [ { "spectrum": "red", "intensity": "5", "source": "LED", "light_complex_settings": { "light_days": [ { "start_day": "1", "duration": "2", "diurnal_light": { "cycle_length": "24", "start_time": "0", "duration": "8" } }, { "start_day": "3", "duration": "5", "diurnal_light": { "cycle_length": "24", "start_time": "0", "duration": "16" } } ] } }, { "spectrum": "blue", "intensity": "5", "source": "LED", "light_complex_settings": { "light_days": [ { "start_day": "1", "duration": "2", "diurnal_light": { "cycle_length": "24", "start_time": "0", "duration": "8" } }, { "start_day": "3", "duration": "5", "diurnal_light": { "cycle_length": "24", "start_time": "0", "duration": "16" } } ] } } ] } }, "measurement": { "technique": "Luciferase luminescence", "equipment": "Top count1", "parameters": "Control plate shows background <150 cps in L, <30cps in D, insignificant, so no background subtracted." }, "sample_preparation": { "method": "Cultures were in alternate columns of the 96-well plates (i.e. columns 1, 3, 5, ... 11) to avoid light crosstalk.\nThis also speeds up plate reading in this two-PMT instrument, which reads columns 1 and 7 together, then skips 2 and 8, etc.\nThe artificial seawater was refreshed and luciferin was applied 24 h before assays started." }, "samples": { "sample": [ { "sample_id": "1", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "2", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "3", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "4", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "5", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "6", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "LHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "7", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "8", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "9", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "10", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "11", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "12", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pLHY", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "13", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "14", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "15", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "16", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "17", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "18", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "TOC1", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "19", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "20", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "21", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "22", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "23", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } }, { "sample_id": "24", "sample_type": "Cells-population", "origin": "Cell culture", "growth_stage": "standard", "age": "7", "genetic_info": { "species": "Ostreococcus tauri", "background": "Ostreo wt", "genotype": "Wild Type", "provenance": "Robust stock" }, "marker": "pTOC", "growth_cond_name": "8L:16D", "experiment_cond_name": "SD to LD", "param": { "@name": "TAG", "@value": "Luc" } } ] } }, "biblio": { "principal": "Andrew Millar", "institution": "University of Edinburgh", "author": "Laura Dixon" } }