# BUSCO version is: 3.0.2 # The lineage dataset is: bacteria_odb9 (Creation date: 2016-11-01, number of species: 3663, number of BUSCOs: 148) # To reproduce this run: python /home/administrator/conda2/envs/spades/bin/quast.py -i /DATB/markop/CPB/CPB_rcf_DNAseq/quast/Enterobacter/quast_corrected_input/spades.fasta -o spades -l /home/administrator/conda2/envs/spades/lib/python3.6/site-packages/quast_libs/busco/bacteria/ -m genome -c 30 -t /DATB/markop/CPB/CPB_rcf_DNAseq/quast/Enterobacter/busco_stats/tmp/ -sp fly --augustus_parameters '''' # # Summarized benchmarking in BUSCO notation for file /DATB/markop/CPB/CPB_rcf_DNAseq/quast/Enterobacter/quast_corrected_input/spades.fasta # BUSCO was run in mode: genome C:54.8%[S:50.7%,D:4.1%],F:16.2%,M:29.0%,n:148 81 Complete BUSCOs (C) 75 Complete and single-copy BUSCOs (S) 6 Complete and duplicated BUSCOs (D) 24 Fragmented BUSCOs (F) 43 Missing BUSCOs (M) 148 Total BUSCO groups searched