Command line: /home/administrator/SPAdes-3.13.0-Linux/bin/spades.py --meta -k 21,41,71,101 -m 230 -t 32 -o /DATA/markop/CPB_metaSpades/output -1 /DATA/markop/CPB_metaSpades/input/unmerged_1.fq -2 /DATA/markop/CPB_metaSpades/input/unmerged_2.fq -s /DATA/markop/CPB_metaSpades/input/merged.fq System information: SPAdes version: 3.13.0 Python version: 2.7.15 OS: Linux-4.13.0-41-generic-x86_64-with-debian-stretch-sid Output dir: /DATA/markop/CPB_metaSpades/output Mode: read error correction and assembling Debug mode is turned OFF Dataset parameters: Metagenomic mode Reads: Library number: 1, library type: paired-end orientation: fr left reads: ['/DATA/markop/CPB_metaSpades/input/unmerged_1.fq'] right reads: ['/DATA/markop/CPB_metaSpades/input/unmerged_2.fq'] interlaced reads: not specified single reads: ['/DATA/markop/CPB_metaSpades/input/merged.fq'] merged reads: not specified Read error correction parameters: Iterations: 1 PHRED offset will be auto-detected Corrected reads will be compressed Assembly parameters: k: [21, 41, 71, 101] Repeat resolution is enabled Mismatch careful mode is turned OFF MismatchCorrector will be SKIPPED Coverage cutoff is turned OFF Other parameters: Dir for temp files: /DATA/markop/CPB_metaSpades/output/tmp Threads: 32 Memory limit (in Gb): 230