STAR version=2.7.3a STAR compilation time,server,dir=Tue Oct 8 14:26:19 EDT 2019 vega:/home/dobin/data/STAR/STARcode/STAR.master/source ##### Command Line: STAR --runThreadN 30 --runMode genomeGenerate --genomeDir ../intermediate/Desiree/ --genomeFastaFiles ../input/stCuSTr-D_tr_representatives.fasta --limitGenomeGenerateRAM=242371378560 ##### Initial USER parameters from Command Line: ###### All USER parameters from Command Line: runThreadN 30 ~RE-DEFINED runMode genomeGenerate ~RE-DEFINED genomeDir ../intermediate/Desiree/ ~RE-DEFINED genomeFastaFiles ../input/stCuSTr-D_tr_representatives.fasta ~RE-DEFINED limitGenomeGenerateRAM 242371378560 ~RE-DEFINED ##### Finished reading parameters from all sources ##### Final user re-defined parameters-----------------: runMode genomeGenerate runThreadN 30 genomeDir ../intermediate/Desiree/ genomeFastaFiles ../input/stCuSTr-D_tr_representatives.fasta limitGenomeGenerateRAM 242371378560 ------------------------------- ##### Final effective command line: STAR --runMode genomeGenerate --runThreadN 30 --genomeDir ../intermediate/Desiree/ --genomeFastaFiles ../input/stCuSTr-D_tr_representatives.fasta --limitGenomeGenerateRAM 242371378560 ---------------------------------------- Finished loading and checking parameters Feb 05 11:44:01 ... starting to generate Genome files ../input/stCuSTr-D_tr_representatives.fasta : chr # 0 "CLCdnDe10_100013" chrStart: 0 ../input/stCuSTr-D_tr_representatives.fasta : chr # 1 "CLCdnDe10_100016" chrStart: 262144 ../input/stCuSTr-D_tr_representatives.fasta : chr # 2 "CLCdnDe7_121556" chrStart: 524288 ../input/stCuSTr-D_tr_representatives.fasta : chr # 3 "CLCdnDe13_163868" chrStart: 786432 ../input/stCuSTr-D_tr_representatives.fasta : chr # 4 "CLCdnDe10_100043" chrStart: 1048576 ../input/stCuSTr-D_tr_representatives.fasta : chr # 5 "CLCdnDe10_100047" chrStart: 1310720 ../input/stCuSTr-D_tr_representatives.fasta : chr # 6 "CLCdnDe2_83550" chrStart: 1572864 ../input/stCuSTr-D_tr_representatives.fasta : chr # 7 "CLCdnDe10_100075" chrStart: 1835008 ../input/stCuSTr-D_tr_representatives.fasta : chr # 8 "CLCdnDe10_100089" chrStart: 2097152 ../input/stCuSTr-D_tr_representatives.fasta : chr # 9 "CLCdnDe10_100097" chrStart: 2359296 ../input/stCuSTr-D_tr_representatives.fasta : chr # 10 "CLCdnDe10_100108" chrStart: 2621440 ../input/stCuSTr-D_tr_representatives.fasta : chr # 11 "VdnDe7_32809" chrStart: 2883584 ../input/stCuSTr-D_tr_representatives.fasta : chr # 12 "CLCdnDe10_100110" chrStart: 3145728 ../input/stCuSTr-D_tr_representatives.fasta : chr # 13 "CLCdnDe10_100113" chrStart: 3407872 ../input/stCuSTr-D_tr_representatives.fasta : chr # 14 "VdnDe5_107152" chrStart: 3670016 ../input/stCuSTr-D_tr_representatives.fasta : chr # 15 "CLCdnDe10_100123" chrStart: 3932160 ../input/stCuSTr-D_tr_representatives.fasta : chr # 16 "CLCdnDe10_100129" chrStart: 4194304 ../input/stCuSTr-D_tr_representatives.fasta : chr # 17 "CLCdnDe3_98603" chrStart: 4456448 ../input/stCuSTr-D_tr_representatives.fasta : chr # 18 "CLCdnDe7_8807" chrStart: 4718592 ../input/stCuSTr-D_tr_representatives.fasta : chr # 19 "VdnDe2_3215" chrStart: 4980736 ../input/stCuSTr-D_tr_representatives.fasta : chr # 20 "CLCdnDe10_100180" chrStart: 5242880 ../input/stCuSTr-D_tr_representatives.fasta : chr # 21 "CLCdnDe10_100193" chrStart: 5505024 ../input/stCuSTr-D_tr_representatives.fasta : chr # 22 "CLCdnDe10_10020" chrStart: 5767168 ../input/stCuSTr-D_tr_representatives.fasta : chr # 23 "CLCdnDe3_7853" chrStart: 6029312 ../input/stCuSTr-D_tr_representatives.fasta : chr # 24 "CLCdnDe10_100230" chrStart: 6291456 ../input/stCuSTr-D_tr_representatives.fasta : chr # 25 "CLCdnDe10_100238" chrStart: 6553600 ../input/stCuSTr-D_tr_representatives.fasta : chr # 26 "CLCdnDe10_100240" chrStart: 6815744 ../input/stCuSTr-D_tr_representatives.fasta : chr # 27 "CLCdnDe2_45233" chrStart: 7077888 ../input/stCuSTr-D_tr_representatives.fasta : chr # 28 "CLCdnDe5_132918" chrStart: 7340032 ../input/stCuSTr-D_tr_representatives.fasta : chr # 29 "CLCdnDe3_10413" chrStart: 7602176 ../input/stCuSTr-D_tr_representatives.fasta : chr # 30 "CLCdnDe3_460" chrStart: 7864320 ../input/stCuSTr-D_tr_representatives.fasta : chr # 31 "CLCdnDe10_100263" chrStart: 8126464 ../input/stCuSTr-D_tr_representatives.fasta : chr # 32 "CLCdnDe10_100272" chrStart: 8388608 ../input/stCuSTr-D_tr_representatives.fasta : chr # 33 "CLCdnDe10_100275" chrStart: 8650752 ../input/stCuSTr-D_tr_representatives.fasta : chr # 34 "CLCdnDe2_100647" chrStart: 8912896 ../input/stCuSTr-D_tr_representatives.fasta : chr # 35 "VdnDe1_91292" chrStart: 9175040 ../input/stCuSTr-D_tr_representatives.fasta : chr # 36 "TDe_comp87888_c0_seq1" chrStart: 9437184 ../input/stCuSTr-D_tr_representatives.fasta : chr # 37 "CLCdnDe10_10031" chrStart: 9699328 ../input/stCuSTr-D_tr_representatives.fasta : chr # 38 "TDe_comp72162_c1_seq1" chrStart: 9961472 ../input/stCuSTr-D_tr_representatives.fasta : chr # 39 "CLCdnDe4_51075" chrStart: 10223616 ../input/stCuSTr-D_tr_representatives.fasta : chr # 40 "CLCdnDe10_100372" chrStart: 10485760 ../input/stCuSTr-D_tr_representatives.fasta : chr # 41 "CLCdnDe10_100379" chrStart: 10747904 ../input/stCuSTr-D_tr_representatives.fasta : chr # 42 "CLCdnDe10_100396" chrStart: 11010048 ../input/stCuSTr-D_tr_representatives.fasta : chr # 43 "VdnDe2_211780" chrStart: 11272192 ../input/stCuSTr-D_tr_representatives.fasta : chr # 44 "CLCdnDe10_100410" chrStart: 11534336 ../input/stCuSTr-D_tr_representatives.fasta : chr # 45 "TDe_comp80307_c0_seq1" chrStart: 11796480 ../input/stCuSTr-D_tr_representatives.fasta : chr # 46 "VdnDe2_227599" chrStart: 12058624 ../input/stCuSTr-D_tr_representatives.fasta : chr # 47 "VdnDe3_14893" chrStart: 12320768 ../input/stCuSTr-D_tr_representatives.fasta : chr # 48 "VdnDe1_217064" chrStart: 12582912 ../input/stCuSTr-D_tr_representatives.fasta : chr # 49 "CLCdnDe10_100441" chrStart: 12845056 ../input/stCuSTr-D_tr_representatives.fasta : chr # 50 "CLCdnDe10_100449" chrStart: 13107200 ../input/stCuSTr-D_tr_representatives.fasta : chr # 51 "CLCdnDe10_10045" chrStart: 13369344 ../input/stCuSTr-D_tr_representatives.fasta : chr # 52 "CLCdnDe4_25867" chrStart: 13631488 ../input/stCuSTr-D_tr_representatives.fasta : chr # 53 "CLCdnDe10_100473" chrStart: 13893632 ../input/stCuSTr-D_tr_representatives.fasta : chr # 54 "VdnDe4_38054" chrStart: 14155776 ../input/stCuSTr-D_tr_representatives.fasta : chr # 55 "CLCdnDe10_100480" chrStart: 14417920 ../input/stCuSTr-D_tr_representatives.fasta : chr # 56 "CLCdnDe10_100487" chrStart: 14680064 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57 "CLCdnDe10_100491" chrStart: 14942208 ../input/stCuSTr-D_tr_representatives.fasta : chr # 58 "CLCdnDe10_100499" chrStart: 15204352 ../input/stCuSTr-D_tr_representatives.fasta : chr # 59 "CLCdnDe11_117764" chrStart: 15466496 ../input/stCuSTr-D_tr_representatives.fasta : chr # 60 "CLCdnDe3_104222" chrStart: 15728640 ../input/stCuSTr-D_tr_representatives.fasta : chr # 61 "CLCdnDe10_100519" chrStart: 15990784 ../input/stCuSTr-D_tr_representatives.fasta : chr # 62 "CLCdnDe5_133346" chrStart: 16252928 ../input/stCuSTr-D_tr_representatives.fasta : chr # 63 "CLCdnDe2_100856" chrStart: 16515072 ../input/stCuSTr-D_tr_representatives.fasta : chr # 64 "VdnDe1_122495" chrStart: 16777216 ../input/stCuSTr-D_tr_representatives.fasta : chr # 65 "CLCdnDe10_100605" chrStart: 17039360 ../input/stCuSTr-D_tr_representatives.fasta : chr # 66 "TDe_comp66142_c0_seq1" chrStart: 17301504 ../input/stCuSTr-D_tr_representatives.fasta : chr # 67 "CLCdnDe10_100646" chrStart: 17563648 ../input/stCuSTr-D_tr_representatives.fasta : chr # 68 "CLCdnDe10_100661" chrStart: 17825792 ../input/stCuSTr-D_tr_representatives.fasta : chr # 69 "CLCdnDe10_100670" chrStart: 18087936 ../input/stCuSTr-D_tr_representatives.fasta : chr # 70 "CLCdnDe10_100679" chrStart: 18350080 ../input/stCuSTr-D_tr_representatives.fasta : chr # 71 "VdnDe4_137910" chrStart: 18612224 ../input/stCuSTr-D_tr_representatives.fasta : chr # 72 "VdnDe4_63928" chrStart: 18874368 ../input/stCuSTr-D_tr_representatives.fasta : chr # 73 "CLCdnDe10_100756" chrStart: 19136512 ../input/stCuSTr-D_tr_representatives.fasta : chr # 74 "CLCdnDe10_10076" chrStart: 19398656 ../input/stCuSTr-D_tr_representatives.fasta : chr # 75 "CLCdnDe14_7692" chrStart: 19660800 ../input/stCuSTr-D_tr_representatives.fasta : chr # 76 "CLCdnDe10_100788" chrStart: 19922944 ../input/stCuSTr-D_tr_representatives.fasta : chr # 77 "CLCdnDe10_100790" chrStart: 20185088 ../input/stCuSTr-D_tr_representatives.fasta : chr # 78 "CLCdnDe10_10085" chrStart: 20447232 ../input/stCuSTr-D_tr_representatives.fasta : chr # 79 "CLCdnDe13_130204" chrStart: 20709376 ../input/stCuSTr-D_tr_representatives.fasta : chr # 80 "CLCdnDe11_17903" chrStart: 20971520 ../input/stCuSTr-D_tr_representatives.fasta : chr # 81 "CLCdnDe10_100884" chrStart: 21233664 ../input/stCuSTr-D_tr_representatives.fasta : chr # 82 "CLCdnDe4_94481" chrStart: 21495808 ../input/stCuSTr-D_tr_representatives.fasta : chr # 83 "VdnDe4_78776" chrStart: 21757952 ../input/stCuSTr-D_tr_representatives.fasta : chr # 84 "CLCdnDe3_10341" chrStart: 22020096 ../input/stCuSTr-D_tr_representatives.fasta : chr # 85 "CLCdnDe10_100925" chrStart: 22282240 ../input/stCuSTr-D_tr_representatives.fasta : chr # 86 "CLCdnDe10_100930" chrStart: 22544384 ../input/stCuSTr-D_tr_representatives.fasta : chr # 87 "CLCdnDe10_100935" chrStart: 22806528 ../input/stCuSTr-D_tr_representatives.fasta : chr # 88 "CLCdnDe13_139328" chrStart: 23068672 ../input/stCuSTr-D_tr_representatives.fasta : chr # 89 "CLCdnDe4_27320" chrStart: 23330816 ../input/stCuSTr-D_tr_representatives.fasta : chr # 90 "CLCdnDe10_100954" chrStart: 23592960 ../input/stCuSTr-D_tr_representatives.fasta : chr # 91 "CLCdnDe10_100976" chrStart: 23855104 ../input/stCuSTr-D_tr_representatives.fasta : chr # 92 "CLCdnDe10_100977" chrStart: 24117248 ../input/stCuSTr-D_tr_representatives.fasta : chr # 93 "CLCdnDe10_10100" chrStart: 24379392 ../input/stCuSTr-D_tr_representatives.fasta : chr # 94 "CLCdnDe10_101001" chrStart: 24641536 ../input/stCuSTr-D_tr_representatives.fasta : chr # 95 "CLCdnDe3_104691" chrStart: 24903680 ../input/stCuSTr-D_tr_representatives.fasta : chr # 96 "CLCdnDe10_101013" chrStart: 25165824 ../input/stCuSTr-D_tr_representatives.fasta : chr # 97 "CLCdnDe10_101016" chrStart: 25427968 ../input/stCuSTr-D_tr_representatives.fasta : chr # 98 "CLCdnDe10_25603" chrStart: 25690112 ../input/stCuSTr-D_tr_representatives.fasta : chr # 99 "CLCdnDe10_101028" chrStart: 25952256 ../input/stCuSTr-D_tr_representatives.fasta : chr # 100 "TDe_comp84074_c0_seq1" chrStart: 26214400 ../input/stCuSTr-D_tr_representatives.fasta : chr # 101 "CLCdnDe11_74032" chrStart: 26476544 ../input/stCuSTr-D_tr_representatives.fasta : chr # 102 "CLCdnDe10_10106" chrStart: 26738688 ../input/stCuSTr-D_tr_representatives.fasta : chr # 103 "CLCdnDe6_167562" chrStart: 27000832 ../input/stCuSTr-D_tr_representatives.fasta : chr # 104 "CLCdnDe10_101100" chrStart: 27262976 ../input/stCuSTr-D_tr_representatives.fasta : chr # 105 "CLCdnDe10_101121" chrStart: 27525120 ../input/stCuSTr-D_tr_representatives.fasta : chr # 106 "CLCdnDe10_101162" chrStart: 27787264 ../input/stCuSTr-D_tr_representatives.fasta : chr # 107 "CLCdnDe10_101165" chrStart: 28049408 ../input/stCuSTr-D_tr_representatives.fasta : chr # 108 "VdnDe3_15549" chrStart: 28311552 ../input/stCuSTr-D_tr_representatives.fasta : chr # 109 "CLCdnDe10_101175" chrStart: 28573696 ../input/stCuSTr-D_tr_representatives.fasta : chr # 110 "TDe_comp5339_c0_seq1" chrStart: 28835840 ../input/stCuSTr-D_tr_representatives.fasta : chr # 111 "CLCdnDe10_101215" chrStart: 29097984 ../input/stCuSTr-D_tr_representatives.fasta : chr # 112 "CLCdnDe10_101239" chrStart: 29360128 ../input/stCuSTr-D_tr_representatives.fasta : chr # 113 "CLCdnDe13_4960" chrStart: 29622272 ../input/stCuSTr-D_tr_representatives.fasta : chr # 114 "CLCdnDe10_101266" chrStart: 29884416 ../input/stCuSTr-D_tr_representatives.fasta : chr # 115 "CLCdnDe10_101289" chrStart: 30146560 ../input/stCuSTr-D_tr_representatives.fasta : chr # 116 "TDe_comp62329_c1_seq1" chrStart: 30408704 ../input/stCuSTr-D_tr_representatives.fasta : chr # 117 "CLCdnDe10_101297" chrStart: 30670848 ../input/stCuSTr-D_tr_representatives.fasta : chr # 118 "CLCdnDe13_87632" chrStart: 30932992 ../input/stCuSTr-D_tr_representatives.fasta : chr # 119 "CLCdnDe10_101303" chrStart: 31195136 ../input/stCuSTr-D_tr_representatives.fasta : chr # 120 "CLCdnDe10_101306" chrStart: 31457280 ../input/stCuSTr-D_tr_representatives.fasta : chr # 121 "CLCdnDe10_101316" chrStart: 31719424 ../input/stCuSTr-D_tr_representatives.fasta : chr # 122 "CLCdnDe10_101322" chrStart: 31981568 ../input/stCuSTr-D_tr_representatives.fasta : chr # 123 "VdnDe3_62597" chrStart: 32243712 ../input/stCuSTr-D_tr_representatives.fasta : chr # 124 "VdnDe3_6558" chrStart: 32505856 ../input/stCuSTr-D_tr_representatives.fasta : chr # 125 "CLCdnDe10_10134" chrStart: 32768000 ../input/stCuSTr-D_tr_representatives.fasta : chr # 126 "CLCdnDe11_28644" chrStart: 33030144 ../input/stCuSTr-D_tr_representatives.fasta : chr # 127 "CLCdnDe3_105004" chrStart: 33292288 ../input/stCuSTr-D_tr_representatives.fasta : chr # 128 "CLCdnDe2_101525" chrStart: 33554432 ../input/stCuSTr-D_tr_representatives.fasta : chr # 129 "CLCdnDe10_101391" chrStart: 33816576 ../input/stCuSTr-D_tr_representatives.fasta : chr # 130 "CLCdnDe4_64748" chrStart: 34078720 ../input/stCuSTr-D_tr_representatives.fasta : chr # 131 "CLCdnDe10_10141" chrStart: 34340864 ../input/stCuSTr-D_tr_representatives.fasta : chr # 132 "CLCdnDe10_101420" chrStart: 34603008 ../input/stCuSTr-D_tr_representatives.fasta : chr # 133 "CLCdnDe10_101446" chrStart: 34865152 ../input/stCuSTr-D_tr_representatives.fasta : chr # 134 "CLCdnDe10_101448" chrStart: 35127296 ../input/stCuSTr-D_tr_representatives.fasta : chr # 135 "CLCdnDe10_101462" chrStart: 35389440 ../input/stCuSTr-D_tr_representatives.fasta : chr # 136 "CLCdnDe10_101489" chrStart: 35651584 ../input/stCuSTr-D_tr_representatives.fasta : chr # 137 "CLCdnDe4_49180" chrStart: 35913728 ../input/stCuSTr-D_tr_representatives.fasta : chr # 138 "CLCdnDe12_117863" chrStart: 36175872 ../input/stCuSTr-D_tr_representatives.fasta : chr # 139 "CLCdnDe10_101515" chrStart: 36438016 ../input/stCuSTr-D_tr_representatives.fasta : chr # 140 "CLCdnDe10_101517" chrStart: 36700160 ../input/stCuSTr-D_tr_representatives.fasta : chr # 141 "CLCdnDe10_101522" chrStart: 36962304 ../input/stCuSTr-D_tr_representatives.fasta : chr # 142 "CLCdnDe10_101566" chrStart: 37224448 ../input/stCuSTr-D_tr_representatives.fasta : chr # 143 "TDe_comp83631_c0_seq1" chrStart: 37486592 ../input/stCuSTr-D_tr_representatives.fasta : chr # 144 "CLCdnDe7_143650" chrStart: 37748736 ../input/stCuSTr-D_tr_representatives.fasta : chr # 145 "CLCdnDe10_101658" chrStart: 38010880 ../input/stCuSTr-D_tr_representatives.fasta : chr # 146 "CLCdnDe10_10168" chrStart: 38273024 ../input/stCuSTr-D_tr_representatives.fasta : chr # 147 "CLCdnDe5_134898" chrStart: 38535168 ../input/stCuSTr-D_tr_representatives.fasta : chr # 148 "CLCdnDe10_101684" chrStart: 38797312 ../input/stCuSTr-D_tr_representatives.fasta : chr # 149 "CLCdnDe10_101701" chrStart: 39059456 ../input/stCuSTr-D_tr_representatives.fasta : chr # 150 "CLCdnDe10_28119" chrStart: 39321600 ../input/stCuSTr-D_tr_representatives.fasta : chr # 151 "CLCdnDe10_101704" chrStart: 39583744 ../input/stCuSTr-D_tr_representatives.fasta : chr # 152 "CLCdnDe8_2320" chrStart: 39845888 ../input/stCuSTr-D_tr_representatives.fasta : chr # 153 "CLCdnDe10_101736" chrStart: 40108032 ../input/stCuSTr-D_tr_representatives.fasta : chr # 154 "CLCdnDe10_101747" chrStart: 40370176 ../input/stCuSTr-D_tr_representatives.fasta : chr # 155 "CLCdnDe11_119400" chrStart: 40632320 ../input/stCuSTr-D_tr_representatives.fasta : chr # 156 "CLCdnDe10_101751" chrStart: 40894464 ../input/stCuSTr-D_tr_representatives.fasta : chr # 157 "CLCdnDe3_105410" chrStart: 41156608 ../input/stCuSTr-D_tr_representatives.fasta : chr # 158 "CLCdnDe10_101767" chrStart: 41418752 ../input/stCuSTr-D_tr_representatives.fasta : chr # 159 "CLCdnDe10_101776" chrStart: 41680896 ../input/stCuSTr-D_tr_representatives.fasta : chr # 160 "CLCdnDe10_1018" chrStart: 41943040 ../input/stCuSTr-D_tr_representatives.fasta : chr # 161 "CLCdnDe10_101825" chrStart: 42205184 ../input/stCuSTr-D_tr_representatives.fasta : chr # 162 "CLCdnDe10_101827" chrStart: 42467328 ../input/stCuSTr-D_tr_representatives.fasta : chr # 163 "VdnDe2_43427" chrStart: 42729472 ../input/stCuSTr-D_tr_representatives.fasta : chr # 164 "CLCdnDe10_101836" chrStart: 42991616 ../input/stCuSTr-D_tr_representatives.fasta : chr # 165 "CLCdnDe10_101847" chrStart: 43253760 ../input/stCuSTr-D_tr_representatives.fasta : chr # 166 "CLCdnDe10_101850" chrStart: 43515904 ../input/stCuSTr-D_tr_representatives.fasta : chr # 167 "CLCdnDe13_120586" chrStart: 43778048 ../input/stCuSTr-D_tr_representatives.fasta : chr # 168 "CLCdnDe10_101868" chrStart: 44040192 ../input/stCuSTr-D_tr_representatives.fasta : chr # 169 "CLCdnDe11_23879" chrStart: 44302336 ../input/stCuSTr-D_tr_representatives.fasta : chr # 170 "CLCdnDe6_74954" chrStart: 44564480 ../input/stCuSTr-D_tr_representatives.fasta : chr # 171 "CLCdnDe10_101907" chrStart: 44826624 ../input/stCuSTr-D_tr_representatives.fasta : chr # 172 "CLCdnDe10_101915" chrStart: 45088768 ../input/stCuSTr-D_tr_representatives.fasta : chr # 173 "CLCdnDe8_6675" chrStart: 45350912 ../input/stCuSTr-D_tr_representatives.fasta : chr # 174 "CLCdnDe10_101936" chrStart: 45613056 ../input/stCuSTr-D_tr_representatives.fasta : chr # 175 "CLCdnDe10_101943" chrStart: 45875200 ../input/stCuSTr-D_tr_representatives.fasta : chr # 176 "CLCdnDe10_101945" chrStart: 46137344 ../input/stCuSTr-D_tr_representatives.fasta : chr # 177 "VdnDe2_6639" chrStart: 46399488 ../input/stCuSTr-D_tr_representatives.fasta : chr # 178 "CLCdnDe10_101957" chrStart: 46661632 ../input/stCuSTr-D_tr_representatives.fasta : chr # 179 "VdnDe3_169358" chrStart: 46923776 ../input/stCuSTr-D_tr_representatives.fasta : chr # 180 "VdnDe2_30809" chrStart: 47185920 ../input/stCuSTr-D_tr_representatives.fasta : chr # 181 "CLCdnDe3_136739" chrStart: 47448064 ../input/stCuSTr-D_tr_representatives.fasta : chr # 182 "CLCdnDe10_102000" chrStart: 47710208 ../input/stCuSTr-D_tr_representatives.fasta : chr # 183 "CLCdnDe12_132603" chrStart: 47972352 ../input/stCuSTr-D_tr_representatives.fasta : chr # 184 "CLCdnDe10_102004" chrStart: 48234496 ../input/stCuSTr-D_tr_representatives.fasta : chr # 185 "CLCdnDe10_102008" chrStart: 48496640 ../input/stCuSTr-D_tr_representatives.fasta : chr # 186 "CLCdnDe10_102019" chrStart: 48758784 ../input/stCuSTr-D_tr_representatives.fasta : chr # 187 "CLCdnDe4_114402" chrStart: 49020928 ../input/stCuSTr-D_tr_representatives.fasta : chr # 188 "CLCdnDe10_102040" chrStart: 49283072 ../input/stCuSTr-D_tr_representatives.fasta : chr # 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57771 "VdnDe7_133" chrStart: 15144321024 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57772 "VdnDe7_13492" chrStart: 15144583168 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57773 "VdnDe7_13818" chrStart: 15144845312 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57774 "VdnDe7_14934" chrStart: 15145107456 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57775 "VdnDe7_15374" chrStart: 15145369600 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57776 "VdnDe7_15471" chrStart: 15145631744 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57777 "VdnDe7_15610" chrStart: 15145893888 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57778 "VdnDe7_15629" chrStart: 15146156032 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57779 "VdnDe7_16011" chrStart: 15146418176 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57780 "VdnDe7_16014" chrStart: 15146680320 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57781 "VdnDe7_17487" chrStart: 15146942464 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57782 "VdnDe7_17696" chrStart: 15147204608 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57783 "VdnDe7_17790" chrStart: 15147466752 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57784 "VdnDe7_20425" chrStart: 15147728896 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57785 "VdnDe7_20601" chrStart: 15147991040 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57786 "VdnDe7_20922" chrStart: 15148253184 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57787 "VdnDe7_20958" chrStart: 15148515328 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57788 "VdnDe7_21342" chrStart: 15148777472 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57789 "VdnDe7_21787" chrStart: 15149039616 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57790 "VdnDe7_22103" chrStart: 15149301760 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57791 "VdnDe7_22112" chrStart: 15149563904 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57792 "VdnDe7_22323" chrStart: 15149826048 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57793 "VdnDe7_22373" chrStart: 15150088192 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57794 "VdnDe7_22459" chrStart: 15150350336 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57795 "VdnDe7_22570" chrStart: 15150612480 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57796 "VdnDe7_23283" chrStart: 15150874624 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57797 "VdnDe7_23289" chrStart: 15151136768 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57798 "VdnDe7_23388" chrStart: 15151398912 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57799 "VdnDe7_24556" chrStart: 15151661056 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57800 "VdnDe7_24597" chrStart: 15151923200 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57801 "VdnDe7_25482" chrStart: 15152185344 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57802 "VdnDe7_25845" chrStart: 15152447488 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57803 "VdnDe7_26447" chrStart: 15152709632 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57804 "VdnDe7_26943" chrStart: 15152971776 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57805 "VdnDe7_27583" chrStart: 15153233920 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57806 "VdnDe7_28209" chrStart: 15153496064 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57807 "VdnDe7_28907" chrStart: 15153758208 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57808 "VdnDe7_29341" chrStart: 15154020352 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57809 "VdnDe7_29968" chrStart: 15154282496 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57810 "VdnDe7_30061" chrStart: 15154544640 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57811 "VdnDe7_30242" chrStart: 15154806784 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57812 "VdnDe7_30928" chrStart: 15155068928 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57813 "VdnDe7_31222" chrStart: 15155331072 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57814 "VdnDe7_31492" chrStart: 15155593216 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57815 "VdnDe7_31629" chrStart: 15155855360 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57816 "VdnDe7_31910" chrStart: 15156117504 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57817 "VdnDe7_3205" chrStart: 15156379648 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57818 "VdnDe7_32155" chrStart: 15156641792 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57819 "VdnDe7_32423" chrStart: 15156903936 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57820 "VdnDe7_32551" chrStart: 15157166080 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57821 "VdnDe7_32820" chrStart: 15157428224 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57822 "VdnDe7_34105" chrStart: 15157690368 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57823 "VdnDe7_3434" chrStart: 15157952512 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57824 "VdnDe7_34483" chrStart: 15158214656 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57825 "VdnDe7_34880" chrStart: 15158476800 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57826 "VdnDe7_34959" chrStart: 15158738944 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57827 "VdnDe7_35448" chrStart: 15159001088 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57828 "VdnDe7_35508" chrStart: 15159263232 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57829 "VdnDe7_35926" chrStart: 15159525376 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57830 "VdnDe7_36082" chrStart: 15159787520 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57831 "VdnDe7_36490" chrStart: 15160049664 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57832 "VdnDe7_37272" chrStart: 15160311808 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57833 "VdnDe7_37558" chrStart: 15160573952 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57834 "VdnDe7_37738" chrStart: 15160836096 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57835 "VdnDe7_37905" chrStart: 15161098240 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57836 "VdnDe7_38169" chrStart: 15161360384 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57837 "VdnDe7_3829" chrStart: 15161622528 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57838 "VdnDe7_38403" chrStart: 15161884672 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57839 "VdnDe7_38756" chrStart: 15162146816 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57840 "VdnDe7_38843" chrStart: 15162408960 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57841 "VdnDe7_39122" chrStart: 15162671104 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57842 "VdnDe7_39244" chrStart: 15162933248 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57843 "VdnDe7_39257" chrStart: 15163195392 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57844 "VdnDe7_39428" chrStart: 15163457536 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57845 "VdnDe7_39447" chrStart: 15163719680 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57846 "VdnDe7_39467" chrStart: 15163981824 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57847 "VdnDe7_39824" chrStart: 15164243968 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57848 "VdnDe7_39869" chrStart: 15164506112 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57849 "VdnDe7_39870" chrStart: 15164768256 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57850 "VdnDe7_40346" chrStart: 15165030400 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57851 "VdnDe7_40783" chrStart: 15165292544 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57852 "VdnDe7_40820" chrStart: 15165554688 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57853 "VdnDe7_40981" chrStart: 15165816832 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57854 "VdnDe7_41260" chrStart: 15166078976 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57855 "VdnDe7_41345" chrStart: 15166341120 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57856 "VdnDe7_41840" chrStart: 15166603264 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57857 "VdnDe7_42025" chrStart: 15166865408 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57858 "VdnDe7_42267" chrStart: 15167127552 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57859 "VdnDe7_42285" chrStart: 15167389696 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57860 "VdnDe7_42315" chrStart: 15167651840 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57861 "VdnDe7_42550" chrStart: 15167913984 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57862 "VdnDe7_42664" chrStart: 15168176128 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57863 "VdnDe7_43021" chrStart: 15168438272 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57864 "VdnDe7_43029" chrStart: 15168700416 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57865 "VdnDe7_43239" chrStart: 15168962560 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57866 "VdnDe7_43260" chrStart: 15169224704 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57867 "VdnDe7_43310" chrStart: 15169486848 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57868 "VdnDe7_43395" chrStart: 15169748992 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57869 "VdnDe7_43605" chrStart: 15170011136 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57870 "VdnDe7_43650" chrStart: 15170273280 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57871 "VdnDe7_44041" chrStart: 15170535424 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57872 "VdnDe7_44338" chrStart: 15170797568 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57873 "VdnDe7_44515" chrStart: 15171059712 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57874 "VdnDe7_44560" chrStart: 15171321856 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57875 "VdnDe7_44632" chrStart: 15171584000 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57876 "VdnDe7_44710" chrStart: 15171846144 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57877 "VdnDe7_44773" chrStart: 15172108288 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57878 "VdnDe7_45058" chrStart: 15172370432 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57879 "VdnDe7_45127" chrStart: 15172632576 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57880 "VdnDe7_45535" chrStart: 15172894720 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57881 "VdnDe7_45555" chrStart: 15173156864 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57882 "VdnDe7_45581" chrStart: 15173419008 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57883 "VdnDe7_45693" chrStart: 15173681152 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57884 "VdnDe7_45924" chrStart: 15173943296 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57885 "VdnDe7_46016" chrStart: 15174205440 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57886 "VdnDe7_46507" chrStart: 15174467584 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57887 "VdnDe7_46510" chrStart: 15174729728 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57888 "VdnDe7_46741" chrStart: 15174991872 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57889 "VdnDe7_46760" chrStart: 15175254016 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57890 "VdnDe7_46839" chrStart: 15175516160 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57891 "VdnDe7_46984" chrStart: 15175778304 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57892 "VdnDe7_47341" chrStart: 15176040448 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57893 "VdnDe7_47413" chrStart: 15176302592 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57894 "VdnDe7_47513" chrStart: 15176564736 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57895 "VdnDe7_47657" chrStart: 15176826880 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57896 "VdnDe7_47947" chrStart: 15177089024 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57897 "VdnDe7_48399" chrStart: 15177351168 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57898 "VdnDe7_48453" chrStart: 15177613312 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57899 "VdnDe7_48529" chrStart: 15177875456 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57900 "VdnDe7_49371" chrStart: 15178137600 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57901 "VdnDe7_49588" chrStart: 15178399744 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57902 "VdnDe7_50013" chrStart: 15178661888 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57903 "VdnDe7_50043" chrStart: 15178924032 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57904 "VdnDe7_50269" chrStart: 15179186176 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57905 "VdnDe7_50829" chrStart: 15179448320 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57906 "VdnDe7_51001" chrStart: 15179710464 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57907 "VdnDe7_51608" chrStart: 15179972608 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57908 "VdnDe7_51753" chrStart: 15180234752 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57909 "VdnDe7_52036" chrStart: 15180496896 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57910 "VdnDe7_52182" chrStart: 15180759040 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57911 "VdnDe7_53151" chrStart: 15181021184 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57912 "VdnDe7_53567" chrStart: 15181283328 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57913 "VdnDe7_53939" chrStart: 15181545472 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57914 "VdnDe7_54201" chrStart: 15181807616 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57915 "VdnDe7_54483" chrStart: 15182069760 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57916 "VdnDe7_54484" chrStart: 15182331904 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57917 "VdnDe7_54565" chrStart: 15182594048 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57918 "VdnDe7_54902" chrStart: 15182856192 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57919 "VdnDe7_55467" chrStart: 15183118336 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57920 "VdnDe7_56082" chrStart: 15183380480 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57921 "VdnDe7_56200" chrStart: 15183642624 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57922 "VdnDe7_56288" chrStart: 15183904768 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57923 "VdnDe7_56354" chrStart: 15184166912 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57924 "VdnDe7_56907" chrStart: 15184429056 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57925 "VdnDe7_57102" chrStart: 15184691200 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57926 "VdnDe7_57147" chrStart: 15184953344 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57927 "VdnDe7_57403" chrStart: 15185215488 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57928 "VdnDe7_57767" chrStart: 15185477632 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57929 "VdnDe7_57817" chrStart: 15185739776 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57930 "VdnDe7_57910" chrStart: 15186001920 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57931 "VdnDe7_57993" chrStart: 15186264064 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57932 "VdnDe7_58358" chrStart: 15186526208 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57933 "VdnDe7_58950" chrStart: 15186788352 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57934 "VdnDe7_6948" chrStart: 15187050496 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57935 "VdnDe7_6976" chrStart: 15187312640 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57936 "VdnDe7_7466" chrStart: 15187574784 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57937 "VdnDe7_7480" chrStart: 15187836928 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57938 "VdnDe7_7944" chrStart: 15188099072 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57939 "VdnDe7_8684" chrStart: 15188361216 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57940 "VdnDe7_886" chrStart: 15188623360 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57941 "VdnDe7_9093" chrStart: 15188885504 ../input/stCuSTr-D_tr_representatives.fasta : chr # 57942 "VdnDe7_9602" chrStart: 15189147648 Estimated genome size=15390409792 15189409792 201000000 GstrandBit=34 Number of SA indices: 107020008 Feb 05 11:45:11 ... starting to sort Suffix Array. This may take a long time... Number of chunks: 31; chunks size limit: 29522760 bytes Feb 05 11:45:48 ... sorting Suffix Array chunks and saving them to disk... Writing 23969152 bytes into ../intermediate/Desiree//SA_2 ; empty space on disk = 839699959808 bytes ... done Writing 27910472 bytes into ../intermediate/Desiree//SA_13 ; empty space on disk = 839675990016 bytes ... done Writing 27487432 bytes into ../intermediate/Desiree//SA_21 ; empty space on disk = 839648075776 bytes ... done Writing 26591184 bytes into ../intermediate/Desiree//SA_8 ; empty space on disk = 839620587520 bytes ... done Writing 27379288 bytes into ../intermediate/Desiree//SA_26 ; empty space on disk = 839593992192 bytes ... done Writing 28086944 bytes into ../intermediate/Desiree//SA_0 ; empty space on disk = 839566610432 bytes ... done Writing 26037400 bytes into ../intermediate/Desiree//SA_1 ; empty space on disk = 839538520064 bytes ...Writing 27773896 bytes into ../intermediate/Desiree//SA_12 ; empty space on disk = 839526334464 bytes ... done done Writing 24792512 bytes into ../intermediate/Desiree//SA_9 ; empty space on disk = 839484706816 bytes ... done Writing 27915896 bytes into ../intermediate/Desiree//SA_11 ; empty space on disk = 839459913728 bytes ... done Writing 27519816 bytes into ../intermediate/Desiree//SA_22 ; empty space on disk = 839431995392 bytes ... done Writing 28910960 bytes into ../intermediate/Desiree//SA_29 ; empty space on disk = 839404474368 bytes ... done Writing 27763960 bytes into ../intermediate/Desiree//SA_5 ; empty space on disk = 839375560704 bytes ... done Writing 27948488 bytes into ../intermediate/Desiree//SA_10 ; empty space on disk = 839347793920 bytes ... done Writing 24194800 bytes into ../intermediate/Desiree//SA_7 ; empty space on disk = 839319842816 bytes ...Writing 28539904 bytes into ../intermediate/Desiree//SA_14 ; empty space on disk = 839297470464 bytes ... done done Writing 25578984 bytes into ../intermediate/Desiree//SA_27 ; empty space on disk = 839267106816 bytes ... done Writing 28216624 bytes into ../intermediate/Desiree//SA_24 ; empty space on disk = 839241527296 bytes ... done Writing 28572712 bytes into ../intermediate/Desiree//SA_6 ; empty space on disk = 839213309952 bytes ... done Writing 27853456 bytes into ../intermediate/Desiree//SA_17 ; empty space on disk = 839184736256 bytes ... done Writing 28805112 bytes into ../intermediate/Desiree//SA_4 ; empty space on disk = 839156879360 bytes ... done Writing 28507856 bytes into ../intermediate/Desiree//SA_16 ; empty space on disk = 839128072192 bytes ... done Writing 29103904 bytes into ../intermediate/Desiree//SA_23 ; empty space on disk = 839099564032 bytes ...Writing 29229704 bytes into ../intermediate/Desiree//SA_19 ; empty space on disk = 839086501888 bytes ... done done Writing 27993464 bytes into ../intermediate/Desiree//SA_28 ; empty space on disk = 839041224704 bytes ...Writing 26865896 bytes into ../intermediate/Desiree//SA_15 ; empty space on disk = 839036280832 bytes ... done done Writing 29065520 bytes into ../intermediate/Desiree//SA_3 ; empty space on disk = 838986358784 bytes ... done Writing 28868728 bytes into ../intermediate/Desiree//SA_20 ; empty space on disk = 838957289472 bytes ... done Writing 28442152 bytes into ../intermediate/Desiree//SA_25 ; empty space on disk = 838928416768 bytes ... done Writing 27782440 bytes into ../intermediate/Desiree//SA_18 ; empty space on disk = 838899974144 bytes ... done Writing 28451408 bytes into ../intermediate/Desiree//SA_30 ; empty space on disk = 838872190976 bytes ... done Feb 05 11:47:22 ... loading chunks from disk, packing SA... Feb 05 11:47:53 ... finished generating suffix array Feb 05 11:47:53 ... generating Suffix Array index Feb 05 11:48:18 ... completed Suffix Array index Feb 05 11:48:18 ... writing Genome to disk ... Writing 15189409792 bytes into ../intermediate/Desiree//Genome ; empty space on disk = 839699951616 bytes ... done SA size in bytes: 468212538 Feb 05 11:48:29 ... writing Suffix Array to disk ... Writing 468212538 bytes into ../intermediate/Desiree//SA ; empty space on disk = 824510541824 bytes ... done Feb 05 11:48:30 ... writing SAindex to disk Writing 8 bytes into ../intermediate/Desiree//SAindex ; empty space on disk = 824042328064 bytes ... done Writing 120 bytes into ../intermediate/Desiree//SAindex ; empty space on disk = 824042328064 bytes ... done Writing 1655351975 bytes into ../intermediate/Desiree//SAindex ; empty space on disk = 824042328064 bytes ... done Feb 05 11:48:30 ..... finished successfully DONE: Genome generation, EXITING